Plant mobile domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 2264 |
| AccB1I | GGYRCC | 1 cut(s) | 1005 |
| AciI | CCGC | 1 cut(s) | 204 |
| AclWI | GGATC | 1 cut(s) | 1456 |
| AcoI | YGGCCR | 2 cut(s) | 891, 1020 |
| AcsI | RAATTY | 7 cut(s) | 15, 331, 344, 712, 1036, 1671, 1968 |
| AcvI | CACGTG | 1 cut(s) | 680 |
| AcyI | GRCGYC | 1 cut(s) | 1006 |
| AfaI | GTAC | 3 cut(s) | 464, 1147, 2342 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 203, 755, 1713, 2012 |
| AflIII | ACRYGT | 2 cut(s) | 1468, 2099 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1056, 1088 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1079, 1111 |
| Alw21I | GWGCWC | 2 cut(s) | 518, 722 |
| Alw26I | GTCTC | 4 cut(s) | 201, 599, 1394, 1930 |
| AlwI | GGATC | 1 cut(s) | 1456 |
| Ama87I | CYCGRG | 1 cut(s) | 1221 |
| AoxI | GGCC | 5 cut(s) | 113, 665, 891, 1020, 2058 |
| ApeKI | GCWGC | 2 cut(s) | 2148, 2151 |
| ApoI | RAATTY | 7 cut(s) | 15, 331, 344, 712, 1036, 1671, 1968 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 270, 728 |
| AspLEI | GCGC | 2 cut(s) | 499, 1008 |
| AspS9I | GGNCC | 4 cut(s) | 85, 316, 666, 1076 |
| AsuC2I | CCSGG | 1 cut(s) | 669 |
| AsuHPI | GGTGA | 8 cut(s) | 186, 401, 560, 825, 1730, 1748, 1858, 2030 |
| AsuNHI | GCTAGC | 1 cut(s) | 1904 |
| AvaI | CYCGRG | 1 cut(s) | 1221 |
| AvaII | GGWCC | 3 cut(s) | 85, 316, 1076 |
| AxyI | CCTNAGG | 1 cut(s) | 827 |
| BalI | TGGCCA | 2 cut(s) | 893, 1022 |
| BanI | GGYRCC | 1 cut(s) | 1005 |
| BbrPI | CACGTG | 1 cut(s) | 680 |
| Bbv12I | GWGCWC | 2 cut(s) | 518, 722 |
| BbvI | GCAGC | 2 cut(s) | 2135, 2163 |
| BccI | CCATC | 4 cut(s) | 348, 455, 924, 1330 |
| BclI | TGATCA | 2 cut(s) | 391, 1195 |
| BcnI | CCSGG | 1 cut(s) | 669 |
| BcoDI | GTCTC | 4 cut(s) | 201, 599, 1394, 1930 |
| BfaI | CTAG | 6 cut(s) | 135, 1179, 1326, 1905, 2007, 2145 |
| BfmI | CTRYAG | 4 cut(s) | 89, 813, 1149, 2149 |
| BfoI | RGCGCY | 1 cut(s) | 1009 |
| BfuAI | ACCTGC | 1 cut(s) | 2264 |
| BglII | AGATCT | 1 cut(s) | 2031 |
| BisI | GCNGC | 2 cut(s) | 2149, 2152 |
| BlpI | GCTNAGC | 1 cut(s) | 912 |
| BlsI | GCNGC | 2 cut(s) | 2150, 2153 |
| Bme18I | GGWCC | 3 cut(s) | 85, 316, 1076 |
| BmeT110I | CYCGRG | 1 cut(s) | 1221 |
| BmgT120I | GGNCC | 4 cut(s) | 85, 316, 666, 1076 |
| BmiI | GGNNCC | 3 cut(s) | 318, 402, 1007 |
| BmrI | ACTGGG | 1 cut(s) | 773 |
| BmsI | GCATC | 4 cut(s) | 1404, 1489, 1749, 2047 |
| BmtI | GCTAGC | 1 cut(s) | 1908 |
| BmuI | ACTGGG | 1 cut(s) | 773 |
| BpmI | CTGGAG | 1 cut(s) | 1581 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 912 |
| BpuEI | CTTGAG | 3 cut(s) | 260, 646, 1138 |
| BpuMI | CCSGG | 1 cut(s) | 669 |
| BsaAI | YACGTR | 3 cut(s) | 462, 680, 1360 |
| BsaHI | GRCGYC | 1 cut(s) | 1006 |
| BsaI | GGTCTC | 3 cut(s) | 201, 1394, 1930 |
| BsaJI | CCNNGG | 4 cut(s) | 349, 542, 1017, 1409 |
| BsaWI | WCCGGW | 1 cut(s) | 154 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 203, 755, 1713, 2012 |
| Bse1I | ACTGG | 3 cut(s) | 205, 768, 2197 |
| Bse21I | CCTNAGG | 1 cut(s) | 827 |
| Bse3DI | GCAATG | 3 cut(s) | 836, 1576, 1900 |
| BseDI | CCNNGG | 4 cut(s) | 349, 542, 1017, 1409 |
| BseGI | GGATG | 7 cut(s) | 359, 577, 1093, 1419, 1480, 1629, 2038 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 203, 755, 1713, 2012 |
| BseMI | GCAATG | 3 cut(s) | 836, 1576, 1900 |
| BseMII | CTCAG | 7 cut(s) | 116, 841, 903, 1119, 1395, 1434, 1941 |
| BseNI | ACTGG | 3 cut(s) | 205, 768, 2197 |
| BseRI | GAGGAG | 2 cut(s) | 286, 982 |
| BseXI | GCAGC | 2 cut(s) | 2135, 2163 |
| BseYI | CCCAGC | 1 cut(s) | 1508 |
| BshFI | GGCC | 5 cut(s) | 115, 667, 893, 1022, 2060 |
| BshNI | GGYRCC | 1 cut(s) | 1005 |
| BsiHKAI | GWGCWC | 2 cut(s) | 518, 722 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1221 |
| BsiSI | CCGG | 3 cut(s) | 155, 669, 987 |
| BsiWI | CGTACG | 1 cut(s) | 462 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 203, 755, 1713, 2012 |
| BsmAI | GTCTC | 4 cut(s) | 201, 599, 1394, 1930 |
| BsmI | GAATGC | 1 cut(s) | 94 |
| BsnI | GGCC | 5 cut(s) | 115, 667, 893, 1022, 2060 |
| Bso31I | GGTCTC | 3 cut(s) | 201, 1394, 1930 |
| BsoBI | CYCGRG | 1 cut(s) | 1221 |
| Bsp1286I | GDGCHC | 2 cut(s) | 518, 722 |
| Bsp143I | GATC | 4 cut(s) | 391, 1195, 1448, 2031 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 912 |
| Bsp19I | CCATGG | 2 cut(s) | 542, 1017 |
| BspACI | CCGC | 1 cut(s) | 204 |
| BspANI | GGCC | 5 cut(s) | 115, 667, 893, 1022, 2060 |
| BspCNI | CTCAG | 7 cut(s) | 115, 840, 904, 1120, 1396, 1435, 1940 |
| BspHI | TCATGA | 1 cut(s) | 186 |
| BspLI | GGNNCC | 3 cut(s) | 318, 402, 1007 |
| BspMAI | CTGCAG | 2 cut(s) | 1153, 2153 |
| BspMI | ACCTGC | 1 cut(s) | 2264 |
| BspOI | GCTAGC | 1 cut(s) | 1908 |
| BspPI | GGATC | 1 cut(s) | 1456 |
| BspT107I | GGYRCC | 1 cut(s) | 1005 |
| BspTNI | GGTCTC | 3 cut(s) | 201, 1394, 1930 |
| BsrDI | GCAATG | 3 cut(s) | 836, 1576, 1900 |
| BsrI | ACTGG | 3 cut(s) | 205, 768, 2197 |
| BssECI | CCNNGG | 4 cut(s) | 349, 542, 1017, 1409 |
| BssMI | GATC | 4 cut(s) | 391, 1195, 1448, 2031 |
| BssNI | GRCGYC | 1 cut(s) | 1006 |
| BssT1I | CCWWGG | 2 cut(s) | 542, 1017 |
| Bst4CI | ACNGT | 8 cut(s) | 27, 365, 703, 1381, 1846, 2119, 2221, 2288 |
| Bst6I | CTCTTC | 1 cut(s) | 165 |
| BstACI | GRCGYC | 1 cut(s) | 1006 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 733 |
| BstBAI | YACGTR | 3 cut(s) | 462, 680, 1360 |
| BstC8I | GCNNGC | 3 cut(s) | 501, 665, 1906 |
| BstDEI | CTNAG | 9 cut(s) | 102, 827, 881, 912, 1128, 1404, 1443, 1927, 2324 |
| BstDSI | CCRYGG | 2 cut(s) | 542, 1017 |
| BstEII | GGTNACC | 3 cut(s) | 831, 2108, 2221 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2010 |
| BstF5I | GGATG | 7 cut(s) | 359, 577, 1093, 1419, 1480, 1629, 2038 |
| BstH2I | RGCGCY | 1 cut(s) | 1009 |
| BstHHI | GCGC | 2 cut(s) | 499, 1008 |
| BstKTI | GATC | 4 cut(s) | 394, 1198, 1451, 2034 |
| BstMAI | GTCTC | 4 cut(s) | 201, 599, 1394, 1930 |
| BstMBI | GATC | 4 cut(s) | 391, 1195, 1448, 2031 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 733, 1414, 1890 |
| BstNSI | RCATGY | 2 cut(s) | 1472, 2103 |
| BstPI | GGTNACC | 3 cut(s) | 831, 2108, 2221 |
| BstSFI | CTRYAG | 4 cut(s) | 89, 813, 1149, 2149 |
| BstV1I | GCAGC | 2 cut(s) | 2135, 2163 |
| BstX2I | RGATCY | 1 cut(s) | 2031 |
| BstYI | RGATCY | 1 cut(s) | 2031 |
| Bsu36I | CCTNAGG | 1 cut(s) | 827 |
| BsuRI | GGCC | 5 cut(s) | 115, 667, 893, 1022, 2060 |
| BtgI | CCRYGG | 2 cut(s) | 542, 1017 |
| BtsCI | GGATG | 7 cut(s) | 359, 577, 1093, 1419, 1480, 1629, 2038 |
| BtsIMutI | CAGTG | 2 cut(s) | 708, 1401 |
| BveI | ACCTGC | 1 cut(s) | 2264 |
| Cac8I | GCNNGC | 3 cut(s) | 501, 665, 1906 |
| CciI | TCATGA | 1 cut(s) | 186 |
| CfoI | GCGC | 2 cut(s) | 499, 1008 |
| Cfr13I | GGNCC | 4 cut(s) | 85, 316, 666, 1076 |
| Csp6I | GTAC | 3 cut(s) | 463, 1146, 2341 |
| CviQI | GTAC | 3 cut(s) | 463, 1146, 2341 |
| DdeI | CTNAG | 9 cut(s) | 102, 827, 881, 912, 1128, 1404, 1443, 1927, 2324 |
| DinI | GGCGCC | 1 cut(s) | 1007 |
| DpnI | GATC | 4 cut(s) | 393, 1197, 1450, 2033 |
| DpnII | GATC | 4 cut(s) | 391, 1195, 1448, 2031 |
| DraI | TTTAAA | 1 cut(s) | 1974 |
| EaeI | YGGCCR | 2 cut(s) | 891, 1020 |
| Eam1104I | CTCTTC | 1 cut(s) | 165 |
| EarI | CTCTTC | 1 cut(s) | 165 |
| EciI | GGCGGA | 1 cut(s) | 219 |
| Eco130I | CCWWGG | 2 cut(s) | 542, 1017 |
| Eco31I | GGTCTC | 3 cut(s) | 201, 1394, 1930 |
| Eco32I | GATATC | 1 cut(s) | 1637 |
| Eco47I | GGWCC | 3 cut(s) | 85, 316, 1076 |
| Eco72I | CACGTG | 1 cut(s) | 680 |
| Eco81I | CCTNAGG | 1 cut(s) | 827 |
| Eco88I | CYCGRG | 1 cut(s) | 1221 |
| Eco91I | GGTNACC | 3 cut(s) | 831, 2108, 2221 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2010 |
| EcoO65I | GGTNACC | 3 cut(s) | 831, 2108, 2221 |
| EcoRI | GAATTC | 2 cut(s) | 344, 712 |
| EcoRV | GATATC | 1 cut(s) | 1637 |
| EcoT14I | CCWWGG | 2 cut(s) | 542, 1017 |
| EcoT22I | ATGCAT | 1 cut(s) | 1482 |
| EgeI | GGCGCC | 1 cut(s) | 1007 |
| EheI | GGCGCC | 1 cut(s) | 1007 |
| ErhI | CCWWGG | 2 cut(s) | 542, 1017 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 716, 748 |
| FauNDI | CATATG | 1 cut(s) | 1112 |
| FbaI | TGATCA | 2 cut(s) | 391, 1195 |
| Fnu4HI | GCNGC | 2 cut(s) | 2149, 2152 |
| FokI | GGATG | 7 cut(s) | 366, 584, 1100, 1426, 1467, 1636, 2025 |
| Fsp4HI | GCNGC | 2 cut(s) | 2149, 2152 |
| FspBI | CTAG | 6 cut(s) | 135, 1179, 1326, 1905, 2007, 2145 |
| GlaI | GCGC | 2 cut(s) | 498, 1007 |
| GluI | GCNGC | 2 cut(s) | 2149, 2152 |
| GsaI | CCCAGC | 1 cut(s) | 1512 |
| GsuI | CTGGAG | 1 cut(s) | 1581 |
| HaeII | RGCGCY | 1 cut(s) | 1009 |
| HaeIII | GGCC | 5 cut(s) | 115, 667, 893, 1022, 2060 |
| HapII | CCGG | 3 cut(s) | 155, 669, 987 |
| HhaI | GCGC | 2 cut(s) | 499, 1008 |
| Hin1I | GRCGYC | 1 cut(s) | 1006 |
| Hin6I | GCGC | 2 cut(s) | 497, 1006 |
| HinP1I | GCGC | 2 cut(s) | 497, 1006 |
| HindIII | AAGCTT | 2 cut(s) | 381, 1951 |
| HinfI | GANTC | 9 cut(s) | 287, 607, 980, 1235, 1546, 1583, 1724, 1792, 2312 |
| HpaII | CCGG | 3 cut(s) | 155, 669, 987 |
| HphI | GGTGA | 8 cut(s) | 186, 401, 560, 825, 1730, 1748, 1858, 2030 |
| Hpy166II | GTNNAC | 1 cut(s) | 791 |
| Hpy188I | TCNGA | 8 cut(s) | 369, 520, 1240, 1336, 1669, 1930, 2206, 2311 |
| Hpy188III | TCNNGA | 8 cut(s) | 187, 687, 749, 1199, 1251, 1543, 2050, 2191 |
| Hpy8I | GTNNAC | 1 cut(s) | 791 |
| HpyAV | CCTTC | 9 cut(s) | 261, 301, 541, 632, 1172, 1560, 1568, 2050, 2285 |
| HpyCH4III | ACNGT | 8 cut(s) | 27, 365, 703, 1381, 1846, 2119, 2221, 2288 |
| HpyCH4IV | ACGT | 3 cut(s) | 461, 679, 1359 |
| HpyCH4V | TGCA | 8 cut(s) | 503, 773, 841, 1151, 1480, 2096, 2151, 2159 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 733, 1414, 1890 |
| HpyF3I | CTNAG | 9 cut(s) | 102, 827, 881, 912, 1128, 1404, 1443, 1927, 2324 |
| HpySE526I | ACGT | 3 cut(s) | 461, 679, 1359 |
| Hsp92I | GRCGYC | 1 cut(s) | 1006 |
| HspAI | GCGC | 2 cut(s) | 497, 1006 |
| KasI | GGCGCC | 1 cut(s) | 1005 |
| Ksp22I | TGATCA | 2 cut(s) | 391, 1195 |
| Kzo9I | GATC | 4 cut(s) | 391, 1195, 1448, 2031 |
| LmnI | GCTCC | 3 cut(s) | 285, 406, 2270 |
| Lsp1109I | GCAGC | 2 cut(s) | 2135, 2163 |
| LweI | GCATC | 4 cut(s) | 1404, 1489, 1749, 2047 |
| MaeI | CTAG | 6 cut(s) | 135, 1179, 1326, 1905, 2007, 2145 |
| MaeII | ACGT | 3 cut(s) | 461, 679, 1359 |
| MaeIII | GTNAC | 7 cut(s) | 831, 1840, 2018, 2108, 2221, 2250, 2282 |
| MalI | GATC | 4 cut(s) | 393, 1197, 1450, 2033 |
| MboI | GATC | 4 cut(s) | 391, 1195, 1448, 2031 |
| MfeI | CAATTG | 2 cut(s) | 395, 774 |
| MflI | RGATCY | 1 cut(s) | 2031 |
| MhlI | GDGCHC | 2 cut(s) | 518, 722 |
| MlsI | TGGCCA | 2 cut(s) | 893, 1022 |
| MluNI | TGGCCA | 2 cut(s) | 893, 1022 |
| Mly113I | GGCGCC | 1 cut(s) | 1006 |
| MlyI | GAGTC | 2 cut(s) | 601, 974 |
| MmeI | TCCRAC | 3 cut(s) | 308, 855, 1820 |
| Mox20I | TGGCCA | 2 cut(s) | 893, 1022 |
| Mph1103I | ATGCAT | 1 cut(s) | 1482 |
| MroXI | GAANNNNTTC | 2 cut(s) | 270, 728 |
| MscI | TGGCCA | 2 cut(s) | 893, 1022 |
| MseI | TTAA | 8 cut(s) | 785, 950, 1133, 1299, 1935, 1955, 1973, 2091 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1804 |
| Msp20I | TGGCCA | 2 cut(s) | 893, 1022 |
| MspI | CCGG | 3 cut(s) | 155, 669, 987 |
| MunI | CAATTG | 2 cut(s) | 395, 774 |
| Mva1269I | GAATGC | 1 cut(s) | 94 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 733, 1414, 1890 |
| NarI | GGCGCC | 1 cut(s) | 1006 |
| NciI | CCSGG | 1 cut(s) | 669 |
| NcoI | CCATGG | 2 cut(s) | 542, 1017 |
| NdeI | CATATG | 1 cut(s) | 1112 |
| NdeII | GATC | 4 cut(s) | 391, 1195, 1448, 2031 |
| NheI | GCTAGC | 1 cut(s) | 1904 |
| NlaIV | GGNNCC | 3 cut(s) | 318, 402, 1007 |
| NmuCI | GTSAC | 3 cut(s) | 831, 2018, 2250 |
| NsiI | ATGCAT | 1 cut(s) | 1482 |
| NspI | RCATGY | 2 cut(s) | 1472, 2103 |
| PaeR7I | CTCGAG | 1 cut(s) | 1221 |
| PagI | TCATGA | 1 cut(s) | 186 |
| PciI | ACATGT | 2 cut(s) | 1468, 2099 |
| PctI | GAATGC | 1 cut(s) | 94 |
| PdmI | GAANNNNTTC | 2 cut(s) | 270, 728 |
| PfeI | GAWTC | 7 cut(s) | 287, 1235, 1546, 1583, 1724, 1792, 2312 |
| Pfl23II | CGTACG | 1 cut(s) | 462 |
| PfoI | TCCNGGA | 1 cut(s) | 1597 |
| PkrI | GCNGC | 2 cut(s) | 2150, 2153 |
| PleI | GAGTC | 2 cut(s) | 601, 974 |
| PluTI | GGCGCC | 1 cut(s) | 1009 |
| PmaCI | CACGTG | 1 cut(s) | 680 |
| PmlI | CACGTG | 1 cut(s) | 680 |
| PpsI | GAGTC | 2 cut(s) | 601, 974 |
| Ppu21I | YACGTR | 3 cut(s) | 462, 680, 1360 |
| PscI | ACATGT | 2 cut(s) | 1468, 2099 |
| PspCI | CACGTG | 1 cut(s) | 680 |
| PspEI | GGTNACC | 3 cut(s) | 831, 2108, 2221 |
| PspFI | CCCAGC | 1 cut(s) | 1508 |
| PspLI | CGTACG | 1 cut(s) | 462 |
| PspN4I | GGNNCC | 3 cut(s) | 318, 402, 1007 |
| PspPI | GGNCC | 4 cut(s) | 85, 316, 666, 1076 |
| PspXI | VCTCGAGB | 1 cut(s) | 1221 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2125, 2157 |
| PstI | CTGCAG | 2 cut(s) | 1153, 2153 |
| PsuI | RGATCY | 1 cut(s) | 2031 |
| RsaI | GTAC | 3 cut(s) | 464, 1147, 2342 |
| RsaNI | GTAC | 3 cut(s) | 463, 1146, 2341 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1804 |
| SaqAI | TTAA | 8 cut(s) | 785, 950, 1133, 1299, 1935, 1955, 1973, 2091 |
| SatI | GCNGC | 2 cut(s) | 2149, 2152 |
| Sau3AI | GATC | 4 cut(s) | 391, 1195, 1448, 2031 |
| Sau96I | GGNCC | 4 cut(s) | 85, 316, 666, 1076 |
| SchI | GAGTC | 2 cut(s) | 601, 974 |
| SduI | GDGCHC | 2 cut(s) | 518, 722 |
| SfaNI | GCATC | 4 cut(s) | 1404, 1489, 1749, 2047 |
| SfcI | CTRYAG | 4 cut(s) | 89, 813, 1149, 2149 |
| SfoI | GGCGCC | 1 cut(s) | 1007 |
| Sfr274I | CTCGAG | 1 cut(s) | 1221 |
| SinI | GGWCC | 3 cut(s) | 85, 316, 1076 |
| SlaI | CTCGAG | 1 cut(s) | 1221 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1804 |
| SmlI | CTYRAG | 4 cut(s) | 275, 625, 1117, 1221 |
| SmoI | CTYRAG | 4 cut(s) | 275, 625, 1117, 1221 |
| SsiI | CCGC | 1 cut(s) | 204 |
| SspDI | GGCGCC | 1 cut(s) | 1005 |
| SspI | AATATT | 1 cut(s) | 1942 |
| SspMI | CTAG | 6 cut(s) | 135, 1179, 1326, 1905, 2007, 2145 |
| StyI | CCWWGG | 2 cut(s) | 542, 1017 |
| TaaI | ACNGT | 8 cut(s) | 27, 365, 703, 1381, 1846, 2119, 2221, 2288 |
| TaiI | ACGT | 3 cut(s) | 464, 682, 1362 |
| TaqI | TCGA | 3 cut(s) | 716, 928, 1222 |
| TfiI | GAWTC | 7 cut(s) | 287, 1235, 1546, 1583, 1724, 1792, 2312 |
| Tru1I | TTAA | 8 cut(s) | 785, 950, 1133, 1299, 1935, 1955, 1973, 2091 |
| Tru9I | TTAA | 8 cut(s) | 785, 950, 1133, 1299, 1935, 1955, 1973, 2091 |
| TscAI | CASTG | 2 cut(s) | 708, 1408 |
| TseFI | GTSAC | 3 cut(s) | 831, 2018, 2250 |
| TseI | GCWGC | 2 cut(s) | 2148, 2151 |
| Tsp45I | GTSAC | 3 cut(s) | 831, 2018, 2250 |
| TspGWI | ACGGA | 3 cut(s) | 1152, 1155, 1475 |
| TspRI | CASTG | 2 cut(s) | 708, 1408 |
| VpaK11BI | GGWCC | 3 cut(s) | 85, 316, 1076 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2010 |
| XapI | RAATTY | 7 cut(s) | 15, 331, 344, 712, 1036, 1671, 1968 |
| XceI | RCATGY | 2 cut(s) | 1472, 2103 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 562, 2068 |
| XhoI | CTCGAG | 1 cut(s) | 1221 |
| XmnI | GAANNNNTTC | 2 cut(s) | 270, 728 |
| XspI | CTAG | 6 cut(s) | 135, 1179, 1326, 1905, 2007, 2145 |
| Zsp2I | ATGCAT | 1 cut(s) | 1482 |