Rroxscaffold_1G00042510

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000264
Physical Location & Seq
Reverse (-)
60737273 .. 60741416
4144 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00042510.1

Sequence Viewer

Length: 2046 bp
ATGGTCCATCCCATCAGGTCGGTTGCCATCCACTCCACTGCTTGTAATTCATACACACTAGTATATATAGGTGATGAGCATCCACCTTTGGCGATTGTCATCACCGACTTCGGTGACACTCCCGACGACCTCTCCTCTCTTGAGAGAAAGAAACAAAAAGACAGGCTCTATTCCAAATCCCGGAATCCCCGATACTCCAAAACGACAAAATCCTCTTTTTCTCTAAAACACTCTCTGTTATTTGCTAGAGAGCAACAATCATCTTCCATAATCTTTGTCTCATCTTGGCATCTGTCCATGATTGAAGAGAAAGAAATGGTCATGGTTTCACCAACTGGTGGAGACCCATTTCGCAAAAATGCCTATTTTCTCAAACCCATTCTCCCTGATTCCTCCAATTATGAACCTCCTTTCAATATCCCTCACTGTTTTTCCTCTCTTGCACCCCGTTTTGACCCAAAAAAGCTAGAGCTTCAATTCCTAGGATGGCGTTCCCACAACCAAGATTTGCAGATCAATAAGGCTTTTTTCTCCATTGCAATTCGTCTAGCTAGGGGGATTCGAGTTGCGCTTGCACCAGCTATTCTTTCTCACATTTATAGAGATTTGAGTCTGCTCAAAAGGACAATTGTATCTTCAAATGAATTAAATGTCAAGAATGCTTCTGTACTAGAACTCATAATCAAGTCTCAGTTTCAATTAGTTCAGGTTTGGGCATGGGAACGATTTCTGGAACTTAGGCCAAAGCCCAAAGTTATATGCTATGGTGAGCCGAGATTGGCTCGATGGGGTAAAGTAGATTGTCTGAATGTTGCAGATATGAGGAGGGTTTTAGACTCAGCAGGTGAAGGTTTCATGTGGCGCCCTTATGCCATGGCCATTAAGAACTGGAATTTTCCTAGATACTATGTTGAAAAGGAAGAGTGGGTATTGGTTGGTGCAGGCTTGGATGATGAACTATTGTCGTTTGCCATGTGCTTGAGGCAGTACCTTCCACATAGAGTAGCTAGGCAATTTGGATTTGATCAAGACCTTCCGTGTTCTGTTTCTGGACACAACCAAAATTATGACAACACGAAATTGTATATTCCGTCCAGGCTTTCTGAGGCAGATGTTAGCATTAGATACTTAAATTGGTGGAAGGAATCTGTGTCAGGCCTCGAACAGAGACATATTCCATCGAAAAAGAAAGATAAGAGAGCTGTAGACTTGATATATGATACTACCAGTCCTTGTATTTGTTCTCCAAAGAATTCAGAAGAACTTGTGCAGGTTTCTGCAGGACGGAATGAAGGTGAATATTCTTTTTGTCCTCCAGGATTTTCTCTCAAAAGGAATAGAATGGAAGCTGGAGATCCTATAGACGAAGATGATCTAACTATATCAGAGGCTTTGAAACTTAAAAAGAAGCTTAAAACTGTTGAAACTGGAAAATATACTGACAGTGCGAAGTTGTCAAGTCCCAATCAAATCTTGGCATCTTCATCTGCAGATGAAAGTTCTATGAATATTATGAAGTCAAAAATACTGGAAAAAGAAGTTGTGTTGAGTAGTGAAGTGGTGACTTGGGAAAGTAAAGGTCAGTGGAAACTGGACAAGGTAATCATGAGTCAGGAAAGAAGTCTAAGTAATGACATGGTGAGCATCGTTGGCAATAAATGTCCTAGCAGCACCTCTTTATCTGATAAACCAGAATGTGGTAGCAGCATGTCTTTATTTAAGAAACGGGAATGTGCTAGCAGCAGTTCATTATTTGTGAAACAAGAATGTACTAGCAGTGGCTCTTTATTTGTAAAACTGGAATGTGCTAGCATCAGTCCTTCAATTGCAGATGAAGGTACTTTTGTTAATACTAAGAAGTCTGAAAGATTGGAGAAAGAGGTTCCATTCATTAAAGCTTTGATCTGGGGAGGTAAGGGTAAGAGGAAAATGAAAAATGTAATGAGAAGTAAGGCAAGAAGCAGCTCCTTATTCAAGAAACGGGAAGATGGCAGCAGCCGCACTTCATTTGAAGAACGAGTTTCAGAGCTTAAAGCTAAGGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

681

Amino Acids

77.22

Weight (kDa)

9.22

Isoelectric Point (pI)

48.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 170 - 381 2.3e-45 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000264)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48145 AT1G50745
fragaria_vesca FvH4_3g22280 FvH4_3g22281 FvH4_3g22290 FvH4_3g22300 FvH4_3g22321 FvH4_3g22330 FvH4_3g22330 FvH4_3g22331
rosa_chinensis RchiOBHm_Chr5g0038351 RchiOBHm_Chr5g0038361 RchiOBHm_Chr5g0038371 RchiOBHm_Chr5g0038381 RchiOBHm_Chr5g0038421 RchiOBHm_Chr5g0038451 RchiOBHm_Chr5g0038471 RchiOBHm_Chr5g0038491 RchiOBHm_Chr5g0038561 RchiOBHm_Chr5g0038731 RchiOBHm_Chr5g0038741 RchiOBHm_Chr5g0038771 RchiOBHm_Chr5g0038781 RchiOBHm_Chr5g0038791 RchiOBHm_Chr5g0038801 RchiOBHm_Chr5g0038831
rosa_laevigata RLG00000008815 RLG00000020213 RLG00000033850 RLG00000033864 RLG00000033875
rosa_multiflora Rmu_co8006804.1_g000001 Rmu_co8168012.1_g000001 Rmu_co8236409.1_g000001 Rmu_co8247247.1_g000001 Rmu_co8440391.1_g000001 Rmu_sc0000533.1_g000088 Rmu_sc0003198.1_g000005 Rmu_sc0003198.1_g000006 Rmu_sc0003198.1_g000007 Rmu_sc0003198.1_g000008 Rmu_sc0003198.1_g000013 Rmu_sc0005722.1_g000005 Rmu_sc0005722.1_g000007 Rmu_sc0005722.1_g000012 Rmu_sc0005722.1_g000013 Rmu_sc0005836.1_g000001 Rmu_sc0009149.1_g000006 Rmu_sc0009149.1_g000018 Rmu_sc0009149.1_g000020 Rmu_sc0017397.1_g000004 Rmu_sc0025071.1_g000001 Rmu_sc0032545.1_g000001 Rmu_sc0038346.1_g000001
rosa_roxburghii Rroxscaffold_1G00042150 Rroxscaffold_1G00042180 Rroxscaffold_1G00042230 Rroxscaffold_1G00042240 Rroxscaffold_1G00042260 Rroxscaffold_1G00042320 Rroxscaffold_1G00042330 Rroxscaffold_1G00042350 Rroxscaffold_1G00042360 Rroxscaffold_1G00042370 Rroxscaffold_1G00042400 Rroxscaffold_1G00042430 Rroxscaffold_1G00042440 Rroxscaffold_1G00042510 Rroxscaffold_1G00042580 Rroxscaffold_1G00042620
rosa_rugosa Rorug05G0172200 Rorug05G0172300 Rorug05G0172500 Rorug05G0173100 Rorug05G0173200.1 Rorug05G0173600 Rorug05G0173800 Rorug05G0174000 Rorug05G0174100 Rorug05G0174200 Rorug05G0174200 Rorug05G0174400 Rorug05G0174500 Rorug05G0174600 Rorug05G0174700 Rorug05G0174800
rosa_samantha Rh5AG259600 Rh5AG260200 Rh5AG260600 Rh5AG260800 Rh5AG261300 Rh5AG261400 Rh5AG261500 Rh5AG261700 Rh5AG261900 Rh5BG263600 Rh5BG264200 Rh5BG264500 Rh5BG264800 Rh5BG265100 Rh5BG265200 Rh5BG265500 Rh5BG265600 Rh5BG266000 Rh5CG295900 Rh5CG296700 Rh5CG296800 Rh5CG296900 Rh5CG297200 Rh5CG297700 Rh5CG297900 Rh5CG298100 Rh5CG298200 Rh5CG298300 Rh5CG298400 Rh5CG298500 Rh5CG298900 Rh5CG299200 Rh6DG125700
rosa_wichuraiana Rw0G001950 Rw0G001960 Rw0G013290 Rw5G024020 Rw5G024310 Rw5G024340 Rw5G024350 Rw5G024370 Rw5G024380 Rw5G024390 Rw5G024400 Rw5G024420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 833
Acc36I ACCTGC 2 cut(s) 833, 1261
AccB1I GGYRCC 1 cut(s) 861
AccB7I CCANNNNNTGG 2 cut(s) 338, 1697
AccI GTMKAC 1 cut(s) 1206
AciI CCGC 1 cut(s) 1999
AclWI GGATC 1 cut(s) 1349
AcoI YGGCCR 1 cut(s) 876
AcsI RAATTY 2 cut(s) 892, 1252
AcyI GRCGYC 1 cut(s) 862
AfaI GTAC 4 cut(s) 669, 989, 1771, 1840
AfiI CCNNNNNNNGG 3 cut(s) 180, 338, 1697
AhlI ACTAGT 1 cut(s) 58
AjnI CCWGG 2 cut(s) 1094, 1315
Alw26I GTCTC 4 cut(s) 283, 336, 693, 1162
AlwI GGATC 1 cut(s) 1349
AoxI GGCC 3 cut(s) 740, 876, 1156
ApeKI GCWGC 6 cut(s) 1668, 1704, 1740, 1962, 1992, 1995
ApoI RAATTY 2 cut(s) 892, 1252
Asp700I GAANNNNTTC 1 cut(s) 726
AspA2I CCTAGG 1 cut(s) 481
AspLEI GCGC 2 cut(s) 571, 864
AspS9I GGNCC 1 cut(s) 4
AsuC2I CCSGG 1 cut(s) 181
AsuHPI GGTGA 9 cut(s) 83, 94, 125, 321, 779, 857, 1307, 1573, 1651
AsuNHI GCTAGC 2 cut(s) 1736, 1808
AvaII GGWCC 1 cut(s) 4
AvrII CCTAGG 1 cut(s) 481
BaeI ACNNNNGTAYC 4 cut(s) 615, 648, 1830, 1863
BalI TGGCCA 1 cut(s) 878
BanI GGYRCC 1 cut(s) 861
BbvI GCAGC 6 cut(s) 1680, 1716, 1752, 1974, 2004, 2007
BccI CCATC 7 cut(s) 15, 20, 35, 480, 780, 1186, 1982
BciT130I CCWGG 2 cut(s) 1096, 1317
BclI TGATCA 1 cut(s) 1024
BcnI CCSGG 1 cut(s) 181
BcoDI GTCTC 4 cut(s) 283, 336, 693, 1162
BcuI ACTAGT 1 cut(s) 58
BfmI CTRYAG 4 cut(s) 1203, 1278, 1359, 1488
BfoI RGCGCY 1 cut(s) 865
BfuAI ACCTGC 2 cut(s) 833, 1261
BisI GCNGC 7 cut(s) 1669, 1705, 1741, 1963, 1993, 1996, 1999
BlnI CCTAGG 1 cut(s) 481
BlsI GCNGC 7 cut(s) 1670, 1706, 1742, 1964, 1994, 1997, 2000
Bme1390I CCNGG 3 cut(s) 181, 1096, 1317
Bme18I GGWCC 1 cut(s) 4
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 2 cut(s) 863, 1884
BmrFI CCNGG 3 cut(s) 181, 1096, 1317
BmsI GCATC 5 cut(s) 88, 298, 1487, 1653, 1821
BmtI GCTAGC 2 cut(s) 1740, 1812
BplI GAGNNNNNCTC 2 cut(s) 766, 798
BpmI CTGGAG 2 cut(s) 1299, 1371
Bpu10I CCTNAGC 1 cut(s) 2037
BpuEI CTTGAG 2 cut(s) 161, 1000
BpuMI CCSGG 1 cut(s) 181
BsaBI GATNNNNATC 2 cut(s) 78, 98
BsaHI GRCGYC 1 cut(s) 862
BsaI GGTCTC 1 cut(s) 336
BsaJI CCNNGG 2 cut(s) 481, 873
BsaXI ACNNNNNCTCC 4 cut(s) 116, 146, 366, 396
Bsc4I CCNNNNNNNGG 3 cut(s) 180, 338, 1697
Bse1I ACTGG 7 cut(s) 340, 893, 1227, 1432, 1533, 1596, 1803
Bse3DI GCAATG 1 cut(s) 534
Bse8I GATNNNNATC 2 cut(s) 78, 98
BseBI CCWGG 2 cut(s) 1096, 1317
BseDI CCNNGG 2 cut(s) 481, 873
BseGI GGATG 5 cut(s) 7, 27, 79, 491, 955
BseJI GATNNNNATC 2 cut(s) 78, 98
BseLI CCNNNNNNNGG 3 cut(s) 180, 338, 1697
BseMI GCAATG 1 cut(s) 534
BseMII CTCAG 3 cut(s) 704, 852, 1095
BseNI ACTGG 7 cut(s) 340, 893, 1227, 1432, 1533, 1596, 1803
BseRI GAGGAG 2 cut(s) 124, 838
BseXI GCAGC 6 cut(s) 1680, 1716, 1752, 1974, 2004, 2007
BsgI GTGCAG 2 cut(s) 960, 1289
BshFI GGCC 3 cut(s) 742, 878, 1158
BshNI GGYRCC 1 cut(s) 861
BsiSI CCGG 1 cut(s) 181
BslFI GGGAC 1 cut(s) 1446
BslI CCNNNNNNNGG 3 cut(s) 180, 338, 1697
BsmAI GTCTC 4 cut(s) 283, 336, 693, 1162
BsmFI GGGAC 1 cut(s) 1446
BsmI GAATGC 1 cut(s) 664
BsnI GGCC 3 cut(s) 742, 878, 1158
Bso31I GGTCTC 1 cut(s) 336
Bsp143I GATC 5 cut(s) 513, 1024, 1354, 1372, 1902
Bsp19I CCATGG 1 cut(s) 873
BspACI CCGC 1 cut(s) 1999
BspANI GGCC 3 cut(s) 742, 878, 1158
BspCNI CTCAG 3 cut(s) 703, 851, 1096
BspHI TCATGA 1 cut(s) 1605
BspLI GGNNCC 2 cut(s) 863, 1884
BspMAI CTGCAG 2 cut(s) 1282, 1492
BspMI ACCTGC 2 cut(s) 833, 1261
BspOI GCTAGC 2 cut(s) 1740, 1812
BspPI GGATC 1 cut(s) 1349
BspT107I GGYRCC 1 cut(s) 861
BspTNI GGTCTC 1 cut(s) 336
BsrDI GCAATG 1 cut(s) 534
BsrI ACTGG 7 cut(s) 340, 893, 1227, 1432, 1533, 1596, 1803
BssECI CCNNGG 2 cut(s) 481, 873
BssMI GATC 5 cut(s) 513, 1024, 1354, 1372, 1902
BssNI GRCGYC 1 cut(s) 862
BssT1I CCWWGG 2 cut(s) 481, 873
Bst2UI CCWGG 2 cut(s) 1096, 1317
Bst4CI ACNGT 3 cut(s) 428, 1420, 1445
Bst6I CTCTTC 2 cut(s) 300, 915
BstACI GRCGYC 1 cut(s) 862
BstC8I GCNNGC 4 cut(s) 573, 943, 1738, 1810
BstDEI CTNAG 7 cut(s) 690, 737, 838, 1104, 1625, 1854, 2037
BstDSI CCRYGG 1 cut(s) 873
BstF5I GGATG 5 cut(s) 7, 27, 79, 491, 955
BstH2I RGCGCY 1 cut(s) 865
BstHHI GCGC 2 cut(s) 571, 864
BstKTI GATC 5 cut(s) 516, 1027, 1357, 1375, 1905
BstMAI GTCTC 4 cut(s) 283, 336, 693, 1162
BstMBI GATC 5 cut(s) 513, 1024, 1354, 1372, 1902
BstMWI GCNNNNNNNGC 2 cut(s) 1650, 1998
BstNI CCWGG 2 cut(s) 1096, 1317
BstNSI RCATGY 1 cut(s) 1711
BstSCI CCNGG 3 cut(s) 179, 1094, 1315
BstSFI CTRYAG 4 cut(s) 1203, 1278, 1359, 1488
BstV1I GCAGC 6 cut(s) 1680, 1716, 1752, 1974, 2004, 2007
BstX2I RGATCY 1 cut(s) 1354
BstYI RGATCY 1 cut(s) 1354
BsuRI GGCC 3 cut(s) 742, 878, 1158
BtgI CCRYGG 1 cut(s) 873
BtsCI GGATG 5 cut(s) 7, 27, 79, 491, 955
BtsI GCAGTG 2 cut(s) 36, 1783
BtsIMutI CAGTG 5 cut(s) 36, 424, 1450, 1589, 1783
BveI ACCTGC 2 cut(s) 833, 1261
Cac8I GCNNGC 4 cut(s) 573, 943, 1738, 1810
CciI TCATGA 1 cut(s) 1605
CfoI GCGC 2 cut(s) 571, 864
Cfr13I GGNCC 1 cut(s) 4
Csp6I GTAC 4 cut(s) 668, 988, 1770, 1839
CviAII CATG 9 cut(s) 298, 322, 717, 856, 874, 973, 1606, 1636, 1708
CviQI GTAC 4 cut(s) 668, 988, 1770, 1839
DdeI CTNAG 7 cut(s) 690, 737, 838, 1104, 1625, 1854, 2037
DinI GGCGCC 1 cut(s) 863
DpnI GATC 5 cut(s) 515, 1026, 1356, 1374, 1904
DpnII GATC 5 cut(s) 513, 1024, 1354, 1372, 1902
EaeI YGGCCR 1 cut(s) 876
Eam1104I CTCTTC 2 cut(s) 300, 915
EarI CTCTTC 2 cut(s) 300, 915
Eco130I CCWWGG 2 cut(s) 481, 873
Eco147I AGGCCT 1 cut(s) 1158
Eco31I GGTCTC 1 cut(s) 336
Eco47I GGWCC 1 cut(s) 4
EcoRI GAATTC 1 cut(s) 1252
EcoRII CCWGG 2 cut(s) 1094, 1315
EcoT14I CCWWGG 2 cut(s) 481, 873
EgeI GGCGCC 1 cut(s) 863
EheI GGCGCC 1 cut(s) 863
ErhI CCWWGG 2 cut(s) 481, 873
FaeI CATG 9 cut(s) 301, 325, 720, 859, 877, 976, 1609, 1639, 1711
FaqI GGGAC 1 cut(s) 1446
FatI CATG 9 cut(s) 297, 321, 716, 855, 873, 972, 1605, 1635, 1707
FbaI TGATCA 1 cut(s) 1024
FblI GTMKAC 1 cut(s) 1206
Fnu4HI GCNGC 7 cut(s) 1669, 1705, 1741, 1963, 1993, 1996, 1999
FokI GGATG 4 cut(s) 14, 66, 498, 962
Fsp4HI GCNGC 7 cut(s) 1669, 1705, 1741, 1963, 1993, 1996, 1999
GlaI GCGC 2 cut(s) 570, 863
GluI GCNGC 7 cut(s) 1669, 1705, 1741, 1963, 1993, 1996, 1999
GsuI CTGGAG 2 cut(s) 1299, 1371
HaeII RGCGCY 1 cut(s) 865
HaeIII GGCC 3 cut(s) 742, 878, 1158
HapII CCGG 1 cut(s) 181
HhaI GCGC 2 cut(s) 571, 864
Hin1I GRCGYC 1 cut(s) 862
Hin1II CATG 9 cut(s) 301, 325, 720, 859, 877, 976, 1609, 1639, 1711
Hin6I GCGC 2 cut(s) 569, 862
HinP1I GCGC 2 cut(s) 569, 862
HindIII AAGCTT 2 cut(s) 1409, 1896
HinfI GANTC 7 cut(s) 184, 389, 559, 610, 836, 1145, 1609
HpaII CCGG 1 cut(s) 181
HphI GGTGA 9 cut(s) 83, 94, 125, 321, 779, 857, 1307, 1573, 1651
Hpy166II GTNNAC 1 cut(s) 1207
Hpy188I TCNGA 7 cut(s) 807, 1105, 1258, 1387, 1684, 1864, 2026
Hpy188III TCNNGA 9 cut(s) 122, 140, 655, 731, 1028, 1050, 1606, 1613, 1975
Hpy8I GTNNAC 1 cut(s) 1207
Hpy99I CGWCG 1 cut(s) 128
HpyAV CCTTC 7 cut(s) 842, 1001, 1043, 1135, 1286, 1829, 1830
HpyCH4III ACNGT 3 cut(s) 428, 1420, 1445
HpyF10VI GCNNNNNNNGC 2 cut(s) 1650, 1998
HpyF3I CTNAG 7 cut(s) 690, 737, 838, 1104, 1625, 1854, 2037
Hsp92I GRCGYC 1 cut(s) 862
Hsp92II CATG 9 cut(s) 301, 325, 720, 859, 877, 976, 1609, 1639, 1711
HspAI GCGC 2 cut(s) 569, 862
KasI GGCGCC 1 cut(s) 861
Ksp22I TGATCA 1 cut(s) 1024
Kzo9I GATC 5 cut(s) 513, 1024, 1354, 1372, 1902
LmnI GCTCC 1 cut(s) 1970
Lsp1109I GCAGC 6 cut(s) 1680, 1716, 1752, 1974, 2004, 2007
LweI GCATC 5 cut(s) 88, 298, 1487, 1653, 1821
MaeIII GTNAC 2 cut(s) 113, 1561
MalI GATC 5 cut(s) 515, 1026, 1356, 1374, 1904
MboI GATC 5 cut(s) 513, 1024, 1354, 1372, 1902
MboII GAAGA 9 cut(s) 255, 317, 627, 932, 1271, 1379, 1473, 1997, 2024
MfeI CAATTG 2 cut(s) 627, 1824
MflI RGATCY 1 cut(s) 1354
MlsI TGGCCA 1 cut(s) 878
MluNI TGGCCA 1 cut(s) 878
Mly113I GGCGCC 1 cut(s) 862
MlyI GAGTC 3 cut(s) 619, 830, 1618
Mox20I TGGCCA 1 cut(s) 878
MroXI GAANNNNTTC 1 cut(s) 726
MscI TGGCCA 1 cut(s) 878
MseI TTAA 9 cut(s) 647, 882, 1130, 1401, 1413, 1719, 1848, 1893, 2031
Msp20I TGGCCA 1 cut(s) 878
MspI CCGG 1 cut(s) 181
MspR9I CCNGG 3 cut(s) 181, 1096, 1317
MunI CAATTG 2 cut(s) 627, 1824
Mva1269I GAATGC 1 cut(s) 664
MvaI CCWGG 2 cut(s) 1096, 1317
MwoI GCNNNNNNNGC 2 cut(s) 1650, 1998
NarI GGCGCC 1 cut(s) 862
NciI CCSGG 1 cut(s) 181
NcoI CCATGG 1 cut(s) 873
NdeII GATC 5 cut(s) 513, 1024, 1354, 1372, 1902
NheI GCTAGC 2 cut(s) 1736, 1808
NlaIII CATG 9 cut(s) 301, 325, 720, 859, 877, 976, 1609, 1639, 1711
NlaIV GGNNCC 2 cut(s) 863, 1884
NmeAIII GCCGAG 1 cut(s) 798
NmuCI GTSAC 2 cut(s) 113, 1561
NspI RCATGY 1 cut(s) 1711
PagI TCATGA 1 cut(s) 1605
PaqCI CACCTGC 1 cut(s) 833
PceI AGGCCT 1 cut(s) 1158
PctI GAATGC 1 cut(s) 664
PdmI GAANNNNTTC 1 cut(s) 726
PfeI GAWTC 4 cut(s) 184, 389, 559, 1145
PflMI CCANNNNNTGG 2 cut(s) 338, 1697
PfoI TCCNGGA 2 cut(s) 179, 1315
PkrI GCNGC 7 cut(s) 1670, 1706, 1742, 1964, 1994, 1997, 2000
PleI GAGTC 3 cut(s) 618, 830, 1617
PluTI GGCGCC 1 cut(s) 865
PpsI GAGTC 3 cut(s) 618, 830, 1617
Psp6I CCWGG 2 cut(s) 1094, 1315
PspGI CCWGG 2 cut(s) 1094, 1315
PspN4I GGNNCC 2 cut(s) 863, 1884
PspPI GGNCC 1 cut(s) 4
PstI CTGCAG 2 cut(s) 1282, 1492
PsuI RGATCY 1 cut(s) 1354
RsaI GTAC 4 cut(s) 669, 989, 1771, 1840
RsaNI GTAC 4 cut(s) 668, 988, 1770, 1839
SaqAI TTAA 9 cut(s) 647, 882, 1130, 1401, 1413, 1719, 1848, 1893, 2031
SatI GCNGC 7 cut(s) 1669, 1705, 1741, 1963, 1993, 1996, 1999
Sau3AI GATC 5 cut(s) 513, 1024, 1354, 1372, 1902
Sau96I GGNCC 1 cut(s) 4
SchI GAGTC 3 cut(s) 619, 830, 1618
ScrFI CCNGG 3 cut(s) 181, 1096, 1317
SfaNI GCATC 5 cut(s) 88, 298, 1487, 1653, 1821
SfcI CTRYAG 4 cut(s) 1203, 1278, 1359, 1488
SfoI GGCGCC 1 cut(s) 863
SinI GGWCC 1 cut(s) 4
SmlI CTYRAG 2 cut(s) 140, 979
SmoI CTYRAG 2 cut(s) 140, 979
SpeI ACTAGT 1 cut(s) 58
SseBI AGGCCT 1 cut(s) 1158
SsiI CCGC 1 cut(s) 1999
SspDI GGCGCC 1 cut(s) 861
SspI AATATT 2 cut(s) 1301, 1510
StuI AGGCCT 1 cut(s) 1158
StyD4I CCNGG 3 cut(s) 179, 1094, 1315
StyI CCWWGG 2 cut(s) 481, 873
TaaI ACNGT 3 cut(s) 428, 1420, 1445
TaqI TCGA 4 cut(s) 562, 784, 1161, 1181
TatI WGTACW 2 cut(s) 667, 1769
TauI GCSGC 1 cut(s) 2001
TfiI GAWTC 4 cut(s) 184, 389, 559, 1145
Tru1I TTAA 9 cut(s) 647, 882, 1130, 1401, 1413, 1719, 1848, 1893, 2031
Tru9I TTAA 9 cut(s) 647, 882, 1130, 1401, 1413, 1719, 1848, 1893, 2031
TscAI CASTG 5 cut(s) 43, 431, 1450, 1589, 1783
TseFI GTSAC 2 cut(s) 113, 1561
TseI GCWGC 6 cut(s) 1668, 1704, 1740, 1962, 1992, 1995
Tsp45I GTSAC 2 cut(s) 113, 1561
TspGWI ACGGA 3 cut(s) 1026, 1080, 1300
TspRI CASTG 5 cut(s) 43, 431, 1450, 1589, 1783
Van91I CCANNNNNTGG 2 cut(s) 338, 1697
VpaK11BI GGWCC 1 cut(s) 4
XapI RAATTY 2 cut(s) 892, 1252
XceI RCATGY 1 cut(s) 1711
XcmI CCANNNNNNNNNTGG 1 cut(s) 1471
XmaJI CCTAGG 1 cut(s) 481
XmiI GTMKAC 1 cut(s) 1206
XmnI GAANNNNTTC 1 cut(s) 726
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.