Rmu_sc0005722.1_g000007

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005722.1
OG0000264
Physical Location & Seq
Forward (+)
38017 .. 40392
2376 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005722.1_g000007.1.cds

Sequence Viewer

Length: 2040 bp
atgattgaagagaaacaagacctcatgatttcaccaactggcggagacccatttcacaaaacagcccacttcctcaaacccacttcaccttcctccattgatgaaccttttctcaagctccctgattccttctcctccctccctccacattttgaccctacaagttggaatttgaaagttgaattccctggatggcaacacgagaaatggtgctctgaaaccaacaccttcatttttccatggggtgaaaccacaatcacattggaggatgttatggttttgggagactctattttcagtcctattcaaaccagagaagtgaaagaaatagaagacaaacttgagaaagagcgaagggaaattattagaagatgtaagaaggcccggacaagcacgtggttcaacaagttcatcaacagtgggagtgaattcgagcacgaagcatttcttgcctattggctgtccaggtatgttttcaacagtcgaacagtttataggcatgttttatcgattgcaattcgtttagctaggggaacgaaaatttcgcttgcaccatctgttcttgccagcatttataaagatttgggcttactgggaagtgcaattgtagatttaagtaaactaacgagtagtgatgatactatagaattgaacctcaggtcaccattgcagtttgttcaagtttgggcatgggaaagagtgttggaacttagtccattggccaatgttgtcaataatgctgagccaagattggctcgatgggatagagtaaatggtttaagtgtgaaagatttgaggagggttttagactctgccggagaggatttcatgtggcgcccttatgccatggccattgagaactcaaattttccaaaatactatttggaaaaggaaaagtgggttggtcctggtttggatgatgagttcctgtcatttgccatatgcttgagggcgactgagttaaacggaattggtactgcagagcaataccttccgcatagggtagctaggcagtttggatttgatcaagacattcctggttttgttgctcgagctgatgatgattctgatattctctctggaaaagaaatccctcatatagcctggaaacatcacatcagggagattaagaagctaaaattgtatatcccatctaggctttcggaggcagatgtgagcacaagatacatgaaatggtgggaggaaacagtatcaggtctcaaacacatcactgagcctgggatgccacaaaagaagaaagcaaatactaccgagggatcactactgacggataaacatgttccaatgcatcctggttttccacgaaagaaagttgctgggtcaaaggaaaggataagaattgctgatttcaccattccttctgtttcaaatggtagcaatgaaggtaatgattctcttgttcctccaggattttctcccacaagtaataggatgaaagcaggatatcctatggacgaagatgaactaactatatcagaaattttggagataagaaagaagcataatgttgaaaccataaaaaggggtgatgattcaattcctggtgaaagttctgctgatattatgatgccggaaagattggagaaagaggatatgctgaatccaacattgttgtgtagatatctggcatcctcaactctggaagaaggttctgtacgttctatgctatcagagaggtttgagaaagaggttatgttgagtgaagctgaagctttgattggtcgatccaaggccaagaaaagcctggaaaatgtcaagggatttaatgcaacatgtccaggtaaccatacggtaagtatcatttgtaatgctagttctagctgcagctctgcatttgagaaactatattcctcaaaggagttccagagccagttttcagagcttcaagctacggttaccaggcttgaaagtgtggttgatgtgtcacaagaaaacacaaatggagcaggttttagtaactgcgaaggaacaaaggcttcttcggattctgtatcgctaagaccaagtttttcgtactaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

679

Amino Acids

76.66

Weight (kDa)

5.88

Isoelectric Point (pI)

46.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000264)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48145 AT1G50745
fragaria_vesca FvH4_3g22280 FvH4_3g22281 FvH4_3g22290 FvH4_3g22300 FvH4_3g22321 FvH4_3g22330 FvH4_3g22330 FvH4_3g22331
rosa_chinensis RchiOBHm_Chr5g0038351 RchiOBHm_Chr5g0038361 RchiOBHm_Chr5g0038371 RchiOBHm_Chr5g0038381 RchiOBHm_Chr5g0038421 RchiOBHm_Chr5g0038451 RchiOBHm_Chr5g0038471 RchiOBHm_Chr5g0038491 RchiOBHm_Chr5g0038561 RchiOBHm_Chr5g0038731 RchiOBHm_Chr5g0038741 RchiOBHm_Chr5g0038771 RchiOBHm_Chr5g0038781 RchiOBHm_Chr5g0038791 RchiOBHm_Chr5g0038801 RchiOBHm_Chr5g0038831
rosa_laevigata RLG00000008815 RLG00000020213 RLG00000033850 RLG00000033864 RLG00000033875
rosa_multiflora Rmu_co8006804.1_g000001 Rmu_co8168012.1_g000001 Rmu_co8236409.1_g000001 Rmu_co8247247.1_g000001 Rmu_co8440391.1_g000001 Rmu_sc0000533.1_g000088 Rmu_sc0003198.1_g000005 Rmu_sc0003198.1_g000006 Rmu_sc0003198.1_g000007 Rmu_sc0003198.1_g000008 Rmu_sc0003198.1_g000013 Rmu_sc0005722.1_g000005 Rmu_sc0005722.1_g000007 Rmu_sc0005722.1_g000012 Rmu_sc0005722.1_g000013 Rmu_sc0005836.1_g000001 Rmu_sc0009149.1_g000006 Rmu_sc0009149.1_g000018 Rmu_sc0009149.1_g000020 Rmu_sc0017397.1_g000004 Rmu_sc0025071.1_g000001 Rmu_sc0032545.1_g000001 Rmu_sc0038346.1_g000001
rosa_roxburghii Rroxscaffold_1G00042150 Rroxscaffold_1G00042180 Rroxscaffold_1G00042230 Rroxscaffold_1G00042240 Rroxscaffold_1G00042260 Rroxscaffold_1G00042320 Rroxscaffold_1G00042330 Rroxscaffold_1G00042350 Rroxscaffold_1G00042360 Rroxscaffold_1G00042370 Rroxscaffold_1G00042400 Rroxscaffold_1G00042430 Rroxscaffold_1G00042440 Rroxscaffold_1G00042510 Rroxscaffold_1G00042580 Rroxscaffold_1G00042620
rosa_rugosa Rorug05G0172200 Rorug05G0172300 Rorug05G0172500 Rorug05G0173100 Rorug05G0173200.1 Rorug05G0173600 Rorug05G0173800 Rorug05G0174000 Rorug05G0174100 Rorug05G0174200 Rorug05G0174200 Rorug05G0174400 Rorug05G0174500 Rorug05G0174600 Rorug05G0174700 Rorug05G0174800
rosa_samantha Rh5AG259600 Rh5AG260200 Rh5AG260600 Rh5AG260800 Rh5AG261300 Rh5AG261400 Rh5AG261500 Rh5AG261700 Rh5AG261900 Rh5BG263600 Rh5BG264200 Rh5BG264500 Rh5BG264800 Rh5BG265100 Rh5BG265200 Rh5BG265500 Rh5BG265600 Rh5BG266000 Rh5CG295900 Rh5CG296700 Rh5CG296800 Rh5CG296900 Rh5CG297200 Rh5CG297700 Rh5CG297900 Rh5CG298100 Rh5CG298200 Rh5CG298300 Rh5CG298400 Rh5CG298500 Rh5CG298900 Rh5CG299200 Rh6DG125700
rosa_wichuraiana Rw0G001950 Rw0G001960 Rw0G013290 Rw5G024020 Rw5G024310 Rw5G024340 Rw5G024350 Rw5G024370 Rw5G024380 Rw5G024390 Rw5G024400 Rw5G024420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 576
Acc36I ACCTGC 1 cut(s) 1958
AccB1I GGYRCC 1 cut(s) 834
AciI CCGC 2 cut(s) 42, 995
AclWI GGATC 2 cut(s) 1285, 1740
AcoI YGGCCR 2 cut(s) 720, 849
AcsI RAATTY 6 cut(s) 169, 182, 428, 540, 865, 1500
AcuI CTGAAG 1 cut(s) 1749
AcvI CACGTG 1 cut(s) 396
AcyI GRCGYC 1 cut(s) 835
AfaI GTAC 3 cut(s) 976, 1677, 2036
AfiI CCNNNNNNNGG 2 cut(s) 41, 1542
AflIII ACRYGT 2 cut(s) 1297, 1793
AjuI GAANNNNNNNTTGG 4 cut(s) 885, 917, 1722, 1754
AloI GAACNNNNNNTCC 2 cut(s) 908, 940
Alw21I GWGCWC 3 cut(s) 215, 438, 1181
Alw26I GTCTC 3 cut(s) 39, 279, 1223
AlwI GGATC 2 cut(s) 1285, 1740
Ama87I CYCGRG 1 cut(s) 1050
AoxI GGCC 4 cut(s) 381, 720, 849, 1752
ApeKI GCWGC 2 cut(s) 1842, 1845
ApoI RAATTY 6 cut(s) 169, 182, 428, 540, 865, 1500
Asp700I GAANNNNTTC 2 cut(s) 108, 444
AspLEI GCGC 1 cut(s) 837
AspS9I GGNCC 2 cut(s) 382, 905
AsuC2I CCSGG 1 cut(s) 385
AsuHPI GGTGA 7 cut(s) 24, 78, 257, 654, 1363, 1559, 1577
AvaI CYCGRG 1 cut(s) 1050
AvaII GGWCC 1 cut(s) 905
AxyI CCTNAGG 1 cut(s) 656
BalI TGGCCA 2 cut(s) 722, 851
BanI GGYRCC 1 cut(s) 834
BarI GAAGNNNNNNTAC 2 cut(s) 1659, 1691
BauI CACGAG 1 cut(s) 200
BbrPI CACGTG 1 cut(s) 396
BbsI GAAGAC 1 cut(s) 339
Bbv12I GWGCWC 3 cut(s) 215, 438, 1181
BbvI GCAGC 2 cut(s) 1829, 1857
BccI CCATC 4 cut(s) 186, 562, 753, 1159
BclI TGATCA 1 cut(s) 1024
BcnI CCSGG 1 cut(s) 385
BcoDI GTCTC 3 cut(s) 39, 279, 1223
BfaI CTAG 5 cut(s) 528, 1008, 1155, 1833, 1839
BfmI CTRYAG 3 cut(s) 642, 978, 1843
BfoI RGCGCY 1 cut(s) 838
BfuAI ACCTGC 1 cut(s) 1958
BisI GCNGC 2 cut(s) 1843, 1846
BlpI GCTNAGC 1 cut(s) 741
BlsI GCNGC 2 cut(s) 1844, 1847
Bme18I GGWCC 1 cut(s) 905
BmeT110I CYCGRG 1 cut(s) 1050
BmgT120I GGNCC 2 cut(s) 382, 905
BmiI GGNNCC 1 cut(s) 836
BmrI ACTGGG 1 cut(s) 602
BmsI GCATC 4 cut(s) 1233, 1318, 1578, 1658
BmuI ACTGGG 1 cut(s) 602
BpiI GAAGAC 1 cut(s) 339
BpmI CTGGAG 1 cut(s) 1410
Bpu1102I GCTNAGC 1 cut(s) 741
BpuEI CTTGAG 3 cut(s) 98, 362, 967
BpuMI CCSGG 1 cut(s) 385
Bsa29I ATCGAT 1 cut(s) 509
BsaAI YACGTR 1 cut(s) 396
BsaHI GRCGYC 1 cut(s) 835
BsaI GGTCTC 2 cut(s) 39, 1223
BsaJI CCNNGG 6 cut(s) 187, 239, 846, 1238, 1272, 1749
Bsc4I CCNNNNNNNGG 2 cut(s) 41, 1542
Bse1I ACTGG 3 cut(s) 43, 597, 1891
Bse21I CCTNAGG 1 cut(s) 656
Bse3DI GCAATG 2 cut(s) 665, 1405
BseCI ATCGAT 1 cut(s) 509
BseDI CCNNGG 6 cut(s) 187, 239, 846, 1238, 1272, 1749
BseGI GGATG 7 cut(s) 197, 274, 922, 1248, 1309, 1458, 1649
BseLI CCNNNNNNNGG 2 cut(s) 41, 1542
BseMI GCAATG 2 cut(s) 665, 1405
BseMII CTCAG 4 cut(s) 670, 732, 948, 1224
BseNI ACTGG 3 cut(s) 43, 597, 1891
BseRI GAGGAG 2 cut(s) 124, 811
BseXI GCAGC 2 cut(s) 1829, 1857
BseYI CCCAGC 1 cut(s) 1337
BshFI GGCC 4 cut(s) 383, 722, 851, 1754
BshNI GGYRCC 1 cut(s) 834
BshVI ATCGAT 1 cut(s) 509
BsiHKAI GWGCWC 3 cut(s) 215, 438, 1181
BsiHKCI CYCGRG 1 cut(s) 1050
BsiSI CCGG 3 cut(s) 385, 816, 1592
BslI CCNNNNNNNGG 2 cut(s) 41, 1542
BsmAI GTCTC 3 cut(s) 39, 279, 1223
BsnI GGCC 4 cut(s) 383, 722, 851, 1754
Bso31I GGTCTC 2 cut(s) 39, 1223
BsoBI CYCGRG 1 cut(s) 1050
Bsp1286I GDGCHC 3 cut(s) 215, 438, 1181
Bsp143I GATC 3 cut(s) 1024, 1277, 1745
Bsp1720I GCTNAGC 1 cut(s) 741
Bsp19I CCATGG 2 cut(s) 239, 846
BspACI CCGC 2 cut(s) 42, 995
BspANI GGCC 4 cut(s) 383, 722, 851, 1754
BspCNI CTCAG 4 cut(s) 669, 733, 949, 1225
BspDI ATCGAT 1 cut(s) 509
BspHI TCATGA 1 cut(s) 24
BspLI GGNNCC 1 cut(s) 836
BspMAI CTGCAG 2 cut(s) 982, 1847
BspMI ACCTGC 1 cut(s) 1958
BspPI GGATC 2 cut(s) 1285, 1740
BspT107I GGYRCC 1 cut(s) 834
BspTNI GGTCTC 2 cut(s) 39, 1223
BsrDI GCAATG 2 cut(s) 665, 1405
BsrI ACTGG 3 cut(s) 43, 597, 1891
BssECI CCNNGG 6 cut(s) 187, 239, 846, 1238, 1272, 1749
BssMI GATC 3 cut(s) 1024, 1277, 1745
BssNI GRCGYC 1 cut(s) 835
BssSI CACGAG 1 cut(s) 200
BssT1I CCWWGG 3 cut(s) 239, 846, 1749
Bst2BI CACGAG 1 cut(s) 200
Bst4CI ACNGT 6 cut(s) 419, 482, 490, 1210, 1813, 1915
Bst6I CTCTTC 1 cut(s) 3
BstACI GRCGYC 1 cut(s) 835
BstAPI GCANNNNNTGC 1 cut(s) 449
BstBAI YACGTR 1 cut(s) 396
BstC8I GCNNGC 2 cut(s) 549, 568
BstDEI CTNAG 6 cut(s) 656, 710, 741, 957, 1233, 2018
BstDSI CCRYGG 2 cut(s) 239, 846
BstEII GGTNACC 3 cut(s) 660, 1802, 1915
BstF5I GGATG 7 cut(s) 197, 274, 922, 1248, 1309, 1458, 1649
BstH2I RGCGCY 1 cut(s) 838
BstHHI GCGC 1 cut(s) 837
BstKTI GATC 3 cut(s) 1027, 1280, 1748
BstMAI GTCTC 3 cut(s) 39, 279, 1223
BstMBI GATC 3 cut(s) 1024, 1277, 1745
BstMWI GCNNNNNNNGC 2 cut(s) 449, 1243
BstNSI RCATGY 3 cut(s) 503, 1301, 1797
BstPI GGTNACC 3 cut(s) 660, 1802, 1915
BstSFI CTRYAG 3 cut(s) 642, 978, 1843
BstV1I GCAGC 2 cut(s) 1829, 1857
BstV2I GAAGAC 1 cut(s) 339
Bsu15I ATCGAT 1 cut(s) 509
Bsu36I CCTNAGG 1 cut(s) 656
BsuRI GGCC 4 cut(s) 383, 722, 851, 1754
BsuTUI ATCGAT 1 cut(s) 509
BtgI CCRYGG 2 cut(s) 239, 846
BtsCI GGATG 7 cut(s) 197, 274, 922, 1248, 1309, 1458, 1649
BtsIMutI CAGTG 2 cut(s) 424, 1230
BveI ACCTGC 1 cut(s) 1958
Cac8I GCNNGC 2 cut(s) 549, 568
CciI TCATGA 1 cut(s) 24
CfoI GCGC 1 cut(s) 837
Cfr13I GGNCC 2 cut(s) 382, 905
ClaI ATCGAT 1 cut(s) 509
Csp6I GTAC 3 cut(s) 975, 1676, 2035
CviAII CATG 9 cut(s) 25, 240, 500, 690, 829, 847, 1189, 1298, 1794
CviQI GTAC 3 cut(s) 975, 1676, 2035
DdeI CTNAG 6 cut(s) 656, 710, 741, 957, 1233, 2018
DinI GGCGCC 1 cut(s) 836
DpnI GATC 3 cut(s) 1026, 1279, 1747
DpnII GATC 3 cut(s) 1024, 1277, 1745
EaeI YGGCCR 2 cut(s) 720, 849
Eam1104I CTCTTC 1 cut(s) 3
EarI CTCTTC 1 cut(s) 3
EciI GGCGGA 1 cut(s) 57
Eco130I CCWWGG 3 cut(s) 239, 846, 1749
Eco31I GGTCTC 2 cut(s) 39, 1223
Eco32I GATATC 2 cut(s) 1466, 1643
Eco47I GGWCC 1 cut(s) 905
Eco57I CTGAAG 1 cut(s) 1749
Eco72I CACGTG 1 cut(s) 396
Eco81I CCTNAGG 1 cut(s) 656
Eco88I CYCGRG 1 cut(s) 1050
Eco91I GGTNACC 3 cut(s) 660, 1802, 1915
EcoO65I GGTNACC 3 cut(s) 660, 1802, 1915
EcoRI GAATTC 2 cut(s) 182, 428
EcoRV GATATC 2 cut(s) 1466, 1643
EcoT14I CCWWGG 3 cut(s) 239, 846, 1749
EcoT22I ATGCAT 1 cut(s) 1311
EgeI GGCGCC 1 cut(s) 836
EheI GGCGCC 1 cut(s) 836
ErhI CCWWGG 3 cut(s) 239, 846, 1749
FaeI CATG 9 cut(s) 28, 243, 503, 693, 832, 850, 1192, 1301, 1797
FalI AAGNNNNNCTT 4 cut(s) 324, 356, 432, 464
FatI CATG 9 cut(s) 24, 239, 499, 689, 828, 846, 1188, 1297, 1793
FauNDI CATATG 1 cut(s) 941
FbaI TGATCA 1 cut(s) 1024
Fnu4HI GCNGC 2 cut(s) 1843, 1846
FokI GGATG 7 cut(s) 204, 281, 929, 1255, 1296, 1465, 1636
Fsp4HI GCNGC 2 cut(s) 1843, 1846
FspBI CTAG 5 cut(s) 528, 1008, 1155, 1833, 1839
GlaI GCGC 1 cut(s) 836
GluI GCNGC 2 cut(s) 1843, 1846
GsaI CCCAGC 1 cut(s) 1341
GsuI CTGGAG 1 cut(s) 1410
HaeII RGCGCY 1 cut(s) 838
HaeIII GGCC 4 cut(s) 383, 722, 851, 1754
HapII CCGG 3 cut(s) 385, 816, 1592
HhaI GCGC 1 cut(s) 837
Hin1I GRCGYC 1 cut(s) 835
Hin1II CATG 9 cut(s) 28, 243, 503, 693, 832, 850, 1192, 1301, 1797
Hin6I GCGC 1 cut(s) 835
HinP1I GCGC 1 cut(s) 835
HindIII AAGCTT 1 cut(s) 1731
HinfI GANTC 8 cut(s) 125, 287, 809, 1064, 1412, 1553, 1621, 2006
HpaII CCGG 3 cut(s) 385, 816, 1592
HphI GGTGA 7 cut(s) 24, 78, 257, 654, 1363, 1559, 1577
Hpy166II GTNNAC 1 cut(s) 620
Hpy188I TCNGA 7 cut(s) 217, 1069, 1165, 1498, 1693, 1900, 2005
Hpy188III TCNNGA 5 cut(s) 25, 1028, 1080, 1661, 1885
Hpy8I GTNNAC 1 cut(s) 620
HpyCH4III ACNGT 6 cut(s) 419, 482, 490, 1210, 1813, 1915
HpyCH4IV ACGT 2 cut(s) 395, 1678
HpyCH4V TGCA 9 cut(s) 515, 551, 602, 670, 980, 1309, 1790, 1845, 1853
HpyF10VI GCNNNNNNNGC 2 cut(s) 449, 1243
HpyF3I CTNAG 6 cut(s) 656, 710, 741, 957, 1233, 2018
HpySE526I ACGT 2 cut(s) 395, 1678
Hsp92I GRCGYC 1 cut(s) 835
Hsp92II CATG 9 cut(s) 28, 243, 503, 693, 832, 850, 1192, 1301, 1797
HspAI GCGC 1 cut(s) 835
KasI GGCGCC 1 cut(s) 834
Ksp22I TGATCA 1 cut(s) 1024
Kzo9I GATC 3 cut(s) 1024, 1277, 1745
LmnI GCTCC 2 cut(s) 123, 1964
Lsp1109I GCAGC 2 cut(s) 1829, 1857
LweI GCATC 4 cut(s) 1233, 1318, 1578, 1658
MaeI CTAG 5 cut(s) 528, 1008, 1155, 1833, 1839
MaeII ACGT 2 cut(s) 395, 1678
MaeIII GTNAC 5 cut(s) 660, 1802, 1915, 1944, 1976
MalI GATC 3 cut(s) 1026, 1279, 1747
MboI GATC 3 cut(s) 1024, 1277, 1745
MboII GAAGA 7 cut(s) 20, 344, 381, 1267, 1490, 1676, 1992
MfeI CAATTG 1 cut(s) 603
MhlI GDGCHC 3 cut(s) 215, 438, 1181
MlsI TGGCCA 2 cut(s) 722, 851
MluNI TGGCCA 2 cut(s) 722, 851
Mly113I GGCGCC 1 cut(s) 835
MlyI GAGTC 2 cut(s) 281, 803
MmeI TCCRAC 3 cut(s) 146, 684, 1649
Mox20I TGGCCA 2 cut(s) 722, 851
Mph1103I ATGCAT 1 cut(s) 1311
MroXI GAANNNNTTC 2 cut(s) 108, 444
MscI TGGCCA 2 cut(s) 722, 851
MseI TTAA 5 cut(s) 614, 779, 962, 1128, 1785
MslI CAYNNNNRTG 1 cut(s) 1633
Msp20I TGGCCA 2 cut(s) 722, 851
MspI CCGG 3 cut(s) 385, 816, 1592
MunI CAATTG 1 cut(s) 603
MwoI GCNNNNNNNGC 2 cut(s) 449, 1243
NarI GGCGCC 1 cut(s) 835
NciI CCSGG 1 cut(s) 385
NcoI CCATGG 2 cut(s) 239, 846
NdeI CATATG 1 cut(s) 941
NdeII GATC 3 cut(s) 1024, 1277, 1745
NlaIII CATG 9 cut(s) 28, 243, 503, 693, 832, 850, 1192, 1301, 1797
NlaIV GGNNCC 1 cut(s) 836
NmuCI GTSAC 2 cut(s) 660, 1944
NsiI ATGCAT 1 cut(s) 1311
NspI RCATGY 3 cut(s) 503, 1301, 1797
PaeR7I CTCGAG 1 cut(s) 1050
PagI TCATGA 1 cut(s) 24
PciI ACATGT 2 cut(s) 1297, 1793
PdmI GAANNNNTTC 2 cut(s) 108, 444
PfeI GAWTC 6 cut(s) 125, 1064, 1412, 1553, 1621, 2006
PfoI TCCNGGA 1 cut(s) 1426
PkrI GCNGC 2 cut(s) 1844, 1847
PleI GAGTC 2 cut(s) 281, 803
PluTI GGCGCC 1 cut(s) 838
PmaCI CACGTG 1 cut(s) 396
PmlI CACGTG 1 cut(s) 396
PpsI GAGTC 2 cut(s) 281, 803
Ppu21I YACGTR 1 cut(s) 396
PscI ACATGT 2 cut(s) 1297, 1793
PsiI TTATAA 1 cut(s) 576
PspCI CACGTG 1 cut(s) 396
PspEI GGTNACC 3 cut(s) 660, 1802, 1915
PspFI CCCAGC 1 cut(s) 1337
PspN4I GGNNCC 1 cut(s) 836
PspPI GGNCC 2 cut(s) 382, 905
PspXI VCTCGAGB 1 cut(s) 1050
PsrI GAACNNNNNNTAC 2 cut(s) 1819, 1851
PstI CTGCAG 2 cut(s) 982, 1847
RsaI GTAC 3 cut(s) 976, 1677, 2036
RsaNI GTAC 3 cut(s) 975, 1676, 2035
RseI CAYNNNNRTG 1 cut(s) 1633
SaqAI TTAA 5 cut(s) 614, 779, 962, 1128, 1785
SatI GCNGC 2 cut(s) 1843, 1846
Sau3AI GATC 3 cut(s) 1024, 1277, 1745
Sau96I GGNCC 2 cut(s) 382, 905
SchI GAGTC 2 cut(s) 281, 803
SduI GDGCHC 3 cut(s) 215, 438, 1181
SfaNI GCATC 4 cut(s) 1233, 1318, 1578, 1658
SfcI CTRYAG 3 cut(s) 642, 978, 1843
SfoI GGCGCC 1 cut(s) 836
Sfr274I CTCGAG 1 cut(s) 1050
SinI GGWCC 1 cut(s) 905
SlaI CTCGAG 1 cut(s) 1050
SmiMI CAYNNNNRTG 1 cut(s) 1633
SmlI CTYRAG 4 cut(s) 113, 341, 946, 1050
SmoI CTYRAG 4 cut(s) 113, 341, 946, 1050
SsiI CCGC 2 cut(s) 42, 995
SspDI GGCGCC 1 cut(s) 834
SspMI CTAG 5 cut(s) 528, 1008, 1155, 1833, 1839
StyI CCWWGG 3 cut(s) 239, 846, 1749
TaaI ACNGT 6 cut(s) 419, 482, 490, 1210, 1813, 1915
TaiI ACGT 2 cut(s) 398, 1681
TaqI TCGA 6 cut(s) 432, 484, 509, 757, 1051, 1744
TfiI GAWTC 6 cut(s) 125, 1064, 1412, 1553, 1621, 2006
Tru1I TTAA 5 cut(s) 614, 779, 962, 1128, 1785
Tru9I TTAA 5 cut(s) 614, 779, 962, 1128, 1785
TscAI CASTG 2 cut(s) 424, 1237
TseFI GTSAC 2 cut(s) 660, 1944
TseI GCWGC 2 cut(s) 1842, 1845
Tsp45I GTSAC 2 cut(s) 660, 1944
TspDTI ATGAA 8 cut(s) 117, 220, 400, 817, 1205, 1416, 1469, 1497
TspGWI ACGGA 2 cut(s) 981, 1304
TspRI CASTG 2 cut(s) 424, 1237
VpaK11BI GGWCC 1 cut(s) 905
XapI RAATTY 6 cut(s) 169, 182, 428, 540, 865, 1500
XceI RCATGY 3 cut(s) 503, 1301, 1797
XcmI CCANNNNNNNNNTGG 2 cut(s) 259, 1762
XhoI CTCGAG 1 cut(s) 1050
XmnI GAANNNNTTC 2 cut(s) 108, 444
XspI CTAG 5 cut(s) 528, 1008, 1155, 1833, 1839
Zsp2I ATGCAT 1 cut(s) 1311
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.