Rh5BG264200

Plant mobile domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Forward (+)
33068935 .. 33076166
7232 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG264200.1

Sequence Viewer

Length: 3480 bp
ATGATTGAAGAGAAAGAAATGGTCATGGTTTCACCAACTGGTGGAGACCCATTCCGCAAAAATGCCTATTTTCTCAAACCCATTCTCCCTGATTCCTCCAATTATGAACCTCCTTTCAATCTCCCTCACTGTCTTTCCTCCCTCGCACCCCGTTTTGACCCAAAAAAGCTAGAGCTTCAAGTCCTTGGATGGCGTTTCGACCACCAAGATTTGCAGAGTTGGTTTCTTCACTTGGCTTCTAAGCACCAATCTACATGGAAGAAAGCTGGTGTCTTTGAAGCCATCTTCAATTCCACGTACCAAATCAAAAGGAAAAAGGATTTGGTTTGTGGGTTTGCAGAGAAATGGTGTTGTGAGACCAACACCTTCATCTTTCCATGGGGTGAAGCAACTATCACATTGGAGGATGTTATGGTTTTGGGAGGCTTTTCTGTTTTGGGAGACTCCATTTTAAGTCCTATTGAAAGCAGAGAACTGAAACAAATAGAAGACAAACTTGAGGAAGAGAGATTTGGACTTTACAATCGCGAGGGTGGGATTAGAGTTGCTTACATACACCTATGGATGAAGAAGTTCATGAAGAGTGGGAGCGAATTAGAGCACGAAGCATTCCTTGTGTTCTGGCTGTCCAGGTATGTTTTCCACAATTCTTTCAACGCAGTCAATAAGGCTGTTTTCTCCATTGCAATTCGTCTAGCTAGGGGGATTCGAGTTGCGCTTGCACCAGCTATTCTTTCTCACATTTATAGAGATTTGGGTCTACTCAAAAGGACAATTGCATCTTCAGATGAATTAAATGCCAAGAATGCTTTTGTAAAACTCATAATCAAGTCACAGTTTCAATTAGTTCAGGTTTGGGCATGGGAACGATTTCTGGAACTTAGGCCAAAGCCCAAAGGTATATGCTATGGTGAGCCGAGATTGGCTCGATGGGATAAAGTAGACTGTCTGAATGTTGGAGATATGAGGAGGGTTTTAGACTCAGCAGGTGAAGGTTTCATGTGGCGCCCTTATGCCATGGCCATTAAGAACTGGAATTTTCCTAAATACTATGTTGAAAAGGAAGAGTGGGTGTTGGTTGCTGCAGGCTTGGATGATGAACTATTGTCATTTGCCATGTGCTTGAGGGTGGCTGAGTTAGCTGGATATGATACTATACAGCACTACCTTCCACATAGAGTAGCTCGGCAATTTGGATTTGATCAAGACCTTCCGTGTTCTGTTCCTGGACATAGCCAAAATTATGACAACGCGAAATTGTATATTCCGTCCAGGCTTTCTGAGGCAGATGTTAGCATTAGATACTTAAATTGGTGGAAGGAATCAGTTTCAGGCCTCGAACAGACACATATGCCATCAAAAAAGAACGTTATCAAATCTGTAGACTTGATAAATGATGCCACCATTCCTTGTATTTGTTCTCCAAAGAATTCAGAACTTGTGCAGGTTTCTGCAGGACGGAATGAAGGTGAATATTCTTTTTGTCCTCCAGGATTTTCTCTCAAAAGGAATAGAATGGAAGCTGGAGATCCTATAGACGAAGATGATCTAACTATATCGGAGGCTTTGAAACTTAAGAAGAGGCTTAAAACTGTTGAAACTGGAAAATATACTGACATTTCTGTCGACACCATGAATGAAGAGAAAGAAATGGCCATGGTTTCACCAACTGGGGAAGACCCATTTCGCAAAGAGGCCTACTTTCTCAAACCCATTATCCCTAATTCCTCCATTGATGAACCTTTCAAGCTCCCTCGGGGTTTCACCTCCCTCCCACCCCGTTTTGACCCAAAAAACTGGCCATTGAAGCTTCGATTCCGTGGATGGCGTCTCGACCACCAAGACTTACAGACTTGGGTCGCCCACTTGGCCCCTATTCACCAATCTACATGGAAGAAAGCTGGCATCTTTGAAGCCATCTTCAATTCCACGTACCAAATCAAAAGGAAAAAGGATTTGCTTTGTGGGTTTGCTGAGAAATGGTGTTGTGAGACCAACACCTTCATTTTTCCATGGGGTGAAGCAACCATCACATTGGAGGATGTTATGGTTTTGGGAGGCTTCTCTGTTTTGGGGGACTCTATTTTCAGTCCTCTTGAAAGCAGAGAACTGAGAGAAATAGAAGAGAAGCTTGAGAAAGAGCGAAAAGGACTCTACGATCACTCTGTTGGGTGTAGGAATGCTTGCACAATGTTATGGATGCAGAAATTCATGAAGAGTGGGAGTGAATTGGAGCATGAGGCATTCCTTGTGTTTTGGCTGTCCAGGTATGTGTTCCACAATACTCCTAATAGTTCAGTCAATAAGGCTGTTTTCTCCATTGCGATTCGTTTAGCTAGGGGGATCCCAATTGCGCTTGCACCTGCTGTTCTTGCCCACATTTATAGGGATTTGAGTATGCTGAAAATGACAATTGTAGCTTCAAATGGATTGAATGCTAGGAATGGAATTGTAGATGCCACAATCATGTCACCATTTCATTTAGTTCAGGTTTGGGCATGGGAAAGGTTCGTGGAACTTAGGCCTATACCTATTGTTATAAGCTGTGCTGAGCCAAGATTGGCTCGATGGGATAAGGTAGATTGTCTGAATGTTGGAAATATGAGGAGCGTTTTAGACAAAGCAGGTGAAGGTTTCATTCGGCGCCCTTATACCATGGCCATTAAGAACTGTGTTTTTCCTGCATACTATGTTGAAATGGAAAAGTGGGTGTTGGTTGGTCCAAACTTGGATGGTGAACATGATCTAATGTCATTTGCCATGTTTTTGAGGGTGGCTGAGTTAGTTGGATTTGGTACTAGACAGAAATACCTCCCTCATCGAGTGGCTAGGCAATTTGGATTTAATCAAGACATTCCATGTTCTTCTGTTGCTGGACACAGCCACAGTTTTGAGAATGCAAAGTTGTACGTTCCATCCAAGCTTTCTGAGACAGATACTAGCATGAGATACTTGAGCTGGTGGCAGGAATCAGAGTCACGCCTCGAGCAGAAGAGTATTCCACTGAAAAAGAAACCAAAGAAAGCCGTAGGGGGGTCAAAAGAAGCAAACAAGATATTTAAGGCCGCCATTGCTTGTGATTATTCTCCAAAGAATTCAGAAAAAGTAGTGCAGGTATCTACAAGAAGGAATGATGATAGTGATAACCTTGTAGCTCTAGGATTTCCTCCCACATGTAATGAAATGAATGCTGCAGATCCTATGGATAAAGATGCACTGTCTATATCAGAAGTTCTGAAACATAGCAAGATAGATAAAACTGTTGAAACCAAGAAAAGTGGTGACTGTGAGAAATTATCTGGTAAAGTTCAAGATTTGGTATATTCAAGTGTGGAAAAAGGTACTGGTAATACTATGAGGTCAGAGGGAACAAAGAAGGTACTGAAGACTGAAACTTTGACCGGAGCATCTAAGGCTAAGTGTAACCTGCTAAAATGCAGCGGACAGCAACACAAGAGGTGCAAAAAATCACATGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1159

Amino Acids

132.08

Weight (kDa)

8.75

Isoelectric Point (pI)

37.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 90 - 440 5.1e-102 Plant mobile domain
PMD PF10536 635 - 989 7.8e-99 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000264)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48145 AT1G50745
fragaria_vesca FvH4_3g22280 FvH4_3g22281 FvH4_3g22290 FvH4_3g22300 FvH4_3g22321 FvH4_3g22330 FvH4_3g22330 FvH4_3g22331
rosa_chinensis RchiOBHm_Chr5g0038351 RchiOBHm_Chr5g0038361 RchiOBHm_Chr5g0038371 RchiOBHm_Chr5g0038381 RchiOBHm_Chr5g0038421 RchiOBHm_Chr5g0038451 RchiOBHm_Chr5g0038471 RchiOBHm_Chr5g0038491 RchiOBHm_Chr5g0038561 RchiOBHm_Chr5g0038731 RchiOBHm_Chr5g0038741 RchiOBHm_Chr5g0038771 RchiOBHm_Chr5g0038781 RchiOBHm_Chr5g0038791 RchiOBHm_Chr5g0038801 RchiOBHm_Chr5g0038831
rosa_laevigata RLG00000008815 RLG00000020213 RLG00000033850 RLG00000033864 RLG00000033875
rosa_multiflora Rmu_co8006804.1_g000001 Rmu_co8168012.1_g000001 Rmu_co8236409.1_g000001 Rmu_co8247247.1_g000001 Rmu_co8440391.1_g000001 Rmu_sc0000533.1_g000088 Rmu_sc0003198.1_g000005 Rmu_sc0003198.1_g000006 Rmu_sc0003198.1_g000007 Rmu_sc0003198.1_g000008 Rmu_sc0003198.1_g000013 Rmu_sc0005722.1_g000005 Rmu_sc0005722.1_g000007 Rmu_sc0005722.1_g000012 Rmu_sc0005722.1_g000013 Rmu_sc0005836.1_g000001 Rmu_sc0009149.1_g000006 Rmu_sc0009149.1_g000018 Rmu_sc0009149.1_g000020 Rmu_sc0017397.1_g000004 Rmu_sc0025071.1_g000001 Rmu_sc0032545.1_g000001 Rmu_sc0038346.1_g000001
rosa_roxburghii Rroxscaffold_1G00042150 Rroxscaffold_1G00042180 Rroxscaffold_1G00042230 Rroxscaffold_1G00042240 Rroxscaffold_1G00042260 Rroxscaffold_1G00042320 Rroxscaffold_1G00042330 Rroxscaffold_1G00042350 Rroxscaffold_1G00042360 Rroxscaffold_1G00042370 Rroxscaffold_1G00042400 Rroxscaffold_1G00042430 Rroxscaffold_1G00042440 Rroxscaffold_1G00042510 Rroxscaffold_1G00042580 Rroxscaffold_1G00042620
rosa_rugosa Rorug05G0172200 Rorug05G0172300 Rorug05G0172500 Rorug05G0173100 Rorug05G0173200.1 Rorug05G0173600 Rorug05G0173800 Rorug05G0174000 Rorug05G0174100 Rorug05G0174200 Rorug05G0174200 Rorug05G0174400 Rorug05G0174500 Rorug05G0174600 Rorug05G0174700 Rorug05G0174800
rosa_samantha Rh5AG259600 Rh5AG260200 Rh5AG260600 Rh5AG260800 Rh5AG261300 Rh5AG261400 Rh5AG261500 Rh5AG261700 Rh5AG261900 Rh5BG263600 Rh5BG264200 Rh5BG264500 Rh5BG264800 Rh5BG265100 Rh5BG265200 Rh5BG265500 Rh5BG265600 Rh5BG266000 Rh5CG295900 Rh5CG296700 Rh5CG296800 Rh5CG296900 Rh5CG297200 Rh5CG297700 Rh5CG297900 Rh5CG298100 Rh5CG298200 Rh5CG298300 Rh5CG298400 Rh5CG298500 Rh5CG298900 Rh5CG299200 Rh6DG125700
rosa_wichuraiana Rw0G001950 Rw0G001960 Rw0G013290 Rw5G024020 Rw5G024310 Rw5G024340 Rw5G024350 Rw5G024370 Rw5G024380 Rw5G024390 Rw5G024400 Rw5G024420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2540
AarI CACCTGC 3 cut(s) 977, 2371, 2615
AasI GACNNNNNNGTC 1 cut(s) 1622
Acc36I ACCTGC 6 cut(s) 977, 1435, 2371, 2615, 3103, 3435
AccB1I GGYRCC 2 cut(s) 1005, 2643
AccB7I CCANNNNNTGG 1 cut(s) 41
AccI GTMKAC 4 cut(s) 760, 942, 1383, 1626
AccII CGCG 2 cut(s) 528, 1253
AciI CCGC 3 cut(s) 55, 3066, 3441
AclI AACGTT 1 cut(s) 1368
AclWI GGATC 4 cut(s) 1523, 2338, 2351, 3191
AcoI YGGCCR 4 cut(s) 1020, 1653, 1799, 2658
AcsI RAATTY 4 cut(s) 1036, 1429, 2207, 3094
AcuI CTGAAG 2 cut(s) 768, 3404
AcyI GRCGYC 3 cut(s) 1006, 1828, 2644
AfaI GTAC 6 cut(s) 299, 1934, 2797, 2909, 3343, 3381
AfiI CCNNNNNNNGG 2 cut(s) 41, 3033
AflII CTTAAG 1 cut(s) 1574
AflIII ACRYGT 1 cut(s) 3173
AjnI CCWGG 5 cut(s) 629, 1225, 1271, 1489, 2264
AjuI GAANNNNNNNTTGG 4 cut(s) 305, 337, 495, 527
Alw21I GWGCWC 1 cut(s) 603
Alw26I GTCTC 6 cut(s) 39, 350, 435, 1835, 1985, 2924
AlwI GGATC 4 cut(s) 1523, 2338, 2351, 3191
Ama87I CYCGRG 2 cut(s) 1755, 2984
ApeKI GCWGC 3 cut(s) 1082, 3191, 3438
ApoI RAATTY 4 cut(s) 1036, 1429, 2207, 3094
ArsI GACNNNNNNTTYG 2 cut(s) 3379, 3411
Asp700I GAANNNNTTC 2 cut(s) 572, 870
AspLEI GCGC 4 cut(s) 718, 1008, 2356, 2646
AspS9I GGNCC 2 cut(s) 1870, 2720
AvaI CYCGRG 2 cut(s) 1755, 2984
AvaII GGWCC 1 cut(s) 2720
BalI TGGCCA 4 cut(s) 1022, 1655, 1801, 2660
BamHI GGATCC 1 cut(s) 2343
BanI GGYRCC 2 cut(s) 1005, 2643
BbsI GAAGAC 3 cut(s) 495, 1683, 3392
Bbv12I GWGCWC 1 cut(s) 603
BbvI GCAGC 3 cut(s) 1069, 3178, 3450
BceAI ACGGC 1 cut(s) 3011
BciT130I CCWGG 5 cut(s) 631, 1227, 1273, 1491, 2266
BclI TGATCA 1 cut(s) 1201
BcoDI GTCTC 6 cut(s) 39, 350, 435, 1835, 1985, 2924
BfmI CTRYAG 5 cut(s) 1083, 1380, 1452, 1533, 3192
BfoI RGCGCY 2 cut(s) 1009, 2647
BfrI CTTAAG 1 cut(s) 1574
BfuAI ACCTGC 6 cut(s) 977, 1435, 2371, 2615, 3103, 3435
BglI GCCNNNNNGGC 1 cut(s) 1868
BisI GCNGC 4 cut(s) 1083, 3066, 3192, 3439
BlpI GCTNAGC 1 cut(s) 2550
BlsI GCNGC 4 cut(s) 1084, 3067, 3193, 3440
Bme1390I CCNGG 5 cut(s) 631, 1227, 1273, 1491, 2266
Bme18I GGWCC 1 cut(s) 2720
BmeT110I CYCGRG 2 cut(s) 1755, 2984
BmgT120I GGNCC 2 cut(s) 1870, 2720
BmiI GGNNCC 4 cut(s) 1007, 1872, 2345, 2645
BmrFI CCNGG 5 cut(s) 631, 1227, 1273, 1491, 2266
BmrI ACTGGG 1 cut(s) 1680
BmsI GCATC 7 cut(s) 788, 1387, 1914, 2190, 2446, 3202, 3416
BmuI ACTGGG 1 cut(s) 1680
BoxI GACNNNNGTC 1 cut(s) 1856
BpiI GAAGAC 3 cut(s) 495, 1683, 3392
BplI GAGNNNNNCTC 2 cut(s) 910, 942
BpmI CTGGAG 2 cut(s) 1473, 1545
Bpu1102I GCTNAGC 1 cut(s) 2550
BpuEI CTTGAG 4 cut(s) 518, 1144, 2153, 2974
BsaAI YACGTR 2 cut(s) 297, 1932
BsaHI GRCGYC 3 cut(s) 1006, 1828, 2644
BsaI GGTCTC 3 cut(s) 39, 350, 1985
BsaJI CCNNGG 8 cut(s) 184, 377, 1017, 1656, 1754, 1819, 2012, 2655
BsaWI WCCGGW 1 cut(s) 3401
BsaXI ACNNNNNCTCC 2 cut(s) 69, 99
Bsc4I CCNNNNNNNGG 2 cut(s) 41, 3033
Bse1I ACTGG 6 cut(s) 43, 1037, 1606, 1675, 1802, 3349
Bse3DI GCAATG 3 cut(s) 681, 2319, 3069
BseBI CCWGG 5 cut(s) 631, 1227, 1273, 1491, 2266
BseDI CCNNGG 8 cut(s) 184, 377, 1017, 1656, 1754, 1819, 2012, 2655
BseGI GGATG 9 cut(s) 194, 412, 570, 1099, 1829, 2047, 2205, 2737, 2915
BseLI CCNNNNNNNGG 2 cut(s) 41, 3033
BseMI GCAATG 3 cut(s) 681, 2319, 3069
BseMII CTCAG 8 cut(s) 996, 1125, 1272, 1965, 2102, 2541, 2769, 2919
BseNI ACTGG 6 cut(s) 43, 1037, 1606, 1675, 1802, 3349
BseRI GAGGAG 2 cut(s) 982, 2620
BseXI GCAGC 3 cut(s) 1069, 3178, 3450
BsgI GTGCAG 2 cut(s) 1463, 3131
Bsh1236I CGCG 2 cut(s) 528, 1253
BshNI GGYRCC 2 cut(s) 1005, 2643
BsiHKAI GWGCWC 1 cut(s) 603
BsiHKCI CYCGRG 2 cut(s) 1755, 2984
BsiSI CCGG 1 cut(s) 3402
BslFI GGGAC 1 cut(s) 2090
BslI CCNNNNNNNGG 2 cut(s) 41, 3033
BsmAI GTCTC 6 cut(s) 39, 350, 435, 1835, 1985, 2924
BsmBI CGTCTC 1 cut(s) 1835
BsmFI GGGAC 1 cut(s) 2090
BsmI GAATGC 7 cut(s) 608, 811, 2185, 2243, 2440, 2902, 3193
Bso31I GGTCTC 3 cut(s) 39, 350, 1985
BsoBI CYCGRG 2 cut(s) 1755, 2984
Bsp1286I GDGCHC 1 cut(s) 603
Bsp143I GATC 7 cut(s) 1201, 1528, 1546, 2158, 2343, 2743, 3196
Bsp1720I GCTNAGC 1 cut(s) 2550
Bsp19I CCATGG 5 cut(s) 377, 1017, 1656, 2012, 2655
Bsp68I TCGCGA 1 cut(s) 528
BspACI CCGC 3 cut(s) 55, 3066, 3441
BspCNI CTCAG 8 cut(s) 995, 1126, 1273, 1966, 2103, 2542, 2770, 2920
BspFNI CGCG 2 cut(s) 528, 1253
BspHI TCATGA 2 cut(s) 576, 2211
BspLI GGNNCC 4 cut(s) 1007, 1872, 2345, 2645
BspMAI CTGCAG 3 cut(s) 1087, 1456, 3196
BspMI ACCTGC 6 cut(s) 977, 1435, 2371, 2615, 3103, 3435
BspPI GGATC 4 cut(s) 1523, 2338, 2351, 3191
BspT107I GGYRCC 2 cut(s) 1005, 2643
BspTI CTTAAG 1 cut(s) 1574
BspTNI GGTCTC 3 cut(s) 39, 350, 1985
BsrDI GCAATG 3 cut(s) 681, 2319, 3069
BsrI ACTGG 6 cut(s) 43, 1037, 1606, 1675, 1802, 3349
BssECI CCNNGG 8 cut(s) 184, 377, 1017, 1656, 1754, 1819, 2012, 2655
BssMI GATC 7 cut(s) 1201, 1528, 1546, 2158, 2343, 2743, 3196
BssNI GRCGYC 3 cut(s) 1006, 1828, 2644
BssT1I CCWWGG 6 cut(s) 184, 377, 1017, 1656, 2012, 2655
Bst2UI CCWGG 5 cut(s) 631, 1227, 1273, 1491, 2266
Bst4CI ACNGT 9 cut(s) 131, 837, 947, 1594, 2672, 2888, 3219, 3262, 3287
Bst6I CTCTTC 9 cut(s) 3, 498, 575, 1059, 1574, 1635, 2118, 2210, 2987
BstACI GRCGYC 3 cut(s) 1006, 1828, 2644
BstAFI CTTAAG 1 cut(s) 1574
BstBAI YACGTR 2 cut(s) 297, 1932
BstC8I GCNNGC 5 cut(s) 720, 1087, 1903, 2185, 2358
BstDSI CCRYGG 6 cut(s) 377, 1017, 1656, 1819, 2012, 2655
BstF5I GGATG 9 cut(s) 194, 412, 570, 1099, 1829, 2047, 2205, 2737, 2915
BstFNI CGCG 2 cut(s) 528, 1253
BstH2I RGCGCY 2 cut(s) 1009, 2647
BstHHI GCGC 4 cut(s) 718, 1008, 2356, 2646
BstKTI GATC 7 cut(s) 1204, 1531, 1549, 2161, 2346, 2746, 3199
BstMAI GTCTC 6 cut(s) 39, 350, 435, 1835, 1985, 2924
BstMBI GATC 7 cut(s) 1201, 1528, 1546, 2158, 2343, 2743, 3196
BstMWI GCNNNNNNNGC 7 cut(s) 806, 1139, 1807, 1868, 2372, 3071, 3413
BstNI CCWGG 5 cut(s) 631, 1227, 1273, 1491, 2266
BstNSI RCATGY 1 cut(s) 3177
BstPAI GACNNNNGTC 1 cut(s) 1856
BstSCI CCNGG 5 cut(s) 629, 1225, 1271, 1489, 2264
BstSFI CTRYAG 5 cut(s) 1083, 1380, 1452, 1533, 3192
BstUI CGCG 2 cut(s) 528, 1253
BstV1I GCAGC 3 cut(s) 1069, 3178, 3450
BstV2I GAAGAC 3 cut(s) 495, 1683, 3392
BstX2I RGATCY 3 cut(s) 1528, 2343, 3196
BstXI CCANNNNNNTGG 2 cut(s) 1797, 2035
BstYI RGATCY 3 cut(s) 1528, 2343, 3196
BtgI CCRYGG 6 cut(s) 377, 1017, 1656, 1819, 2012, 2655
BtsCI GGATG 9 cut(s) 194, 412, 570, 1099, 1829, 2047, 2205, 2737, 2915
BtsIMutI CAGTG 3 cut(s) 127, 3002, 3215
BtuMI TCGCGA 1 cut(s) 528
BveI ACCTGC 6 cut(s) 977, 1435, 2371, 2615, 3103, 3435
Cac8I GCNNGC 5 cut(s) 720, 1087, 1903, 2185, 2358
CciI TCATGA 2 cut(s) 576, 2211
CfoI GCGC 4 cut(s) 718, 1008, 2356, 2646
Cfr13I GGNCC 2 cut(s) 1870, 2720
CseI GACGC 1 cut(s) 1817
Csp6I GTAC 6 cut(s) 298, 1933, 2796, 2908, 3342, 3380
CspCI CAANNNNNGTGG 2 cut(s) 3259, 3294
CviQI GTAC 6 cut(s) 298, 1933, 2796, 2908, 3342, 3380
DinI GGCGCC 2 cut(s) 1007, 2645
DpnI GATC 7 cut(s) 1203, 1530, 1548, 2160, 2345, 2745, 3198
DpnII GATC 7 cut(s) 1201, 1528, 1546, 2158, 2343, 2743, 3196
DrdI GACNNNNNNGTC 1 cut(s) 1622
DseDI GACNNNNNNGTC 1 cut(s) 1622
EaeI YGGCCR 4 cut(s) 1020, 1653, 1799, 2658
Eam1104I CTCTTC 9 cut(s) 3, 498, 575, 1059, 1574, 1635, 2118, 2210, 2987
EarI CTCTTC 9 cut(s) 3, 498, 575, 1059, 1574, 1635, 2118, 2210, 2987
Eco130I CCWWGG 6 cut(s) 184, 377, 1017, 1656, 2012, 2655
Eco147I AGGCCT 3 cut(s) 1335, 1697, 2524
Eco31I GGTCTC 3 cut(s) 39, 350, 1985
Eco47I GGWCC 1 cut(s) 2720
Eco57I CTGAAG 2 cut(s) 768, 3404
Eco88I CYCGRG 2 cut(s) 1755, 2984
EcoRI GAATTC 2 cut(s) 1429, 3094
EcoRII CCWGG 5 cut(s) 629, 1225, 1271, 1489, 2264
EcoT14I CCWWGG 6 cut(s) 184, 377, 1017, 1656, 2012, 2655
EgeI GGCGCC 2 cut(s) 1007, 2645
EheI GGCGCC 2 cut(s) 1007, 2645
ErhI CCWWGG 6 cut(s) 184, 377, 1017, 1656, 2012, 2655
Esp3I CGTCTC 1 cut(s) 1835
FalI AAGNNNNNCTT 6 cut(s) 480, 512, 597, 629, 2115, 2147
FaqI GGGAC 1 cut(s) 2090
FauNDI CATATG 1 cut(s) 1350
FbaI TGATCA 1 cut(s) 1201
FblI GTMKAC 4 cut(s) 760, 942, 1383, 1626
Fnu4HI GCNGC 4 cut(s) 1083, 3066, 3192, 3439
FokI GGATG 9 cut(s) 201, 419, 577, 1106, 1836, 2054, 2212, 2744, 2902
Fsp4HI GCNGC 4 cut(s) 1083, 3066, 3192, 3439
GlaI GCGC 4 cut(s) 717, 1007, 2355, 2645
GluI GCNGC 4 cut(s) 1083, 3066, 3192, 3439
GsuI CTGGAG 2 cut(s) 1473, 1545
HaeII RGCGCY 2 cut(s) 1009, 2647
HapII CCGG 1 cut(s) 3402
HgaI GACGC 1 cut(s) 1817
HhaI GCGC 4 cut(s) 718, 1008, 2356, 2646
Hin1I GRCGYC 3 cut(s) 1006, 1828, 2644
Hin6I GCGC 4 cut(s) 716, 1006, 2354, 2644
HinP1I GCGC 4 cut(s) 716, 1006, 2354, 2644
HincII GTYRAC 1 cut(s) 1627
HindII GTYRAC 1 cut(s) 1627
HindIII AAGCTT 3 cut(s) 1808, 2129, 2921
HpaII CCGG 1 cut(s) 3402
Hpy166II GTNNAC 5 cut(s) 761, 943, 1384, 1627, 2738
Hpy188III TCNNGA 9 cut(s) 527, 577, 875, 1205, 1832, 2096, 2212, 2849, 3311
Hpy8I GTNNAC 5 cut(s) 761, 943, 1384, 1627, 2738
HpyCH4III ACNGT 9 cut(s) 131, 837, 947, 1594, 2672, 2888, 3219, 3262, 3287
HpyCH4IV ACGT 4 cut(s) 296, 1368, 1931, 2910
HpyF10VI GCNNNNNNNGC 7 cut(s) 806, 1139, 1807, 1868, 2372, 3071, 3413
HpySE526I ACGT 4 cut(s) 296, 1368, 1931, 2910
Hsp92I GRCGYC 3 cut(s) 1006, 1828, 2644
HspAI GCGC 4 cut(s) 716, 1006, 2354, 2644
KasI GGCGCC 2 cut(s) 1005, 2643
Ksp22I TGATCA 1 cut(s) 1201
Kzo9I GATC 7 cut(s) 1201, 1528, 1546, 2158, 2343, 2743, 3196
LmnI GCTCC 5 cut(s) 588, 1755, 2233, 2607, 3404
Lsp1109I GCAGC 3 cut(s) 1069, 3178, 3450
LweI GCATC 7 cut(s) 788, 1387, 1914, 2190, 2446, 3202, 3416
MaeII ACGT 4 cut(s) 296, 1368, 1931, 2910
MaeIII GTNAC 5 cut(s) 831, 2469, 2976, 3281, 3422
MalI GATC 7 cut(s) 1203, 1530, 1548, 2160, 2345, 2745, 3198
MboI GATC 7 cut(s) 1201, 1528, 1546, 2158, 2343, 2743, 3196
MfeI CAATTG 3 cut(s) 774, 2349, 2412
MflI RGATCY 3 cut(s) 1528, 2343, 3196
MhlI GDGCHC 1 cut(s) 603
MlsI TGGCCA 4 cut(s) 1022, 1655, 1801, 2660
MluNI TGGCCA 4 cut(s) 1022, 1655, 1801, 2660
Mly113I GGCGCC 2 cut(s) 1006, 2644
MlyI GAGTC 5 cut(s) 437, 974, 2072, 2145, 2984
MmeI TCCRAC 3 cut(s) 937, 2575, 2767
Mox20I TGGCCA 4 cut(s) 1022, 1655, 1801, 2660
MroXI GAANNNNTTC 2 cut(s) 572, 870
MscI TGGCCA 4 cut(s) 1022, 1655, 1801, 2660
MseI TTAA 9 cut(s) 452, 794, 1026, 1307, 1575, 1587, 2664, 2844, 3060
MslI CAYNNNNRTG 1 cut(s) 2465
Msp20I TGGCCA 4 cut(s) 1022, 1655, 1801, 2660
MspA1I CMGCKG 1 cut(s) 3441
MspCI CTTAAG 1 cut(s) 1574
MspI CCGG 1 cut(s) 3402
MspR9I CCNGG 5 cut(s) 631, 1227, 1273, 1491, 2266
MunI CAATTG 3 cut(s) 774, 2349, 2412
Mva1269I GAATGC 7 cut(s) 608, 811, 2185, 2243, 2440, 2902, 3193
MvaI CCWGG 5 cut(s) 631, 1227, 1273, 1491, 2266
MvnI CGCG 2 cut(s) 528, 1253
MwoI GCNNNNNNNGC 7 cut(s) 806, 1139, 1807, 1868, 2372, 3071, 3413
NarI GGCGCC 2 cut(s) 1006, 2644
NcoI CCATGG 5 cut(s) 377, 1017, 1656, 2012, 2655
NdeI CATATG 1 cut(s) 1350
NdeII GATC 7 cut(s) 1201, 1528, 1546, 2158, 2343, 2743, 3196
NlaIV GGNNCC 4 cut(s) 1007, 1872, 2345, 2645
NmeAIII GCCGAG 2 cut(s) 942, 1165
NmuCI GTSAC 4 cut(s) 831, 2469, 2976, 3281
NruI TCGCGA 1 cut(s) 528
NspI RCATGY 1 cut(s) 3177
PaeR7I CTCGAG 1 cut(s) 2984
PagI TCATGA 2 cut(s) 576, 2211
PaqCI CACCTGC 3 cut(s) 977, 2371, 2615
PceI AGGCCT 3 cut(s) 1335, 1697, 2524
PciI ACATGT 1 cut(s) 3173
PctI GAATGC 7 cut(s) 608, 811, 2185, 2243, 2440, 2902, 3193
PdmI GAANNNNTTC 2 cut(s) 572, 870
PfeI GAWTC 6 cut(s) 92, 706, 1322, 1815, 2326, 2969
PflMI CCANNNNNTGG 1 cut(s) 41
PfoI TCCNGGA 2 cut(s) 1225, 1489
PkrI GCNGC 4 cut(s) 1084, 3067, 3193, 3440
PleI GAGTC 5 cut(s) 437, 974, 2072, 2145, 2983
PluTI GGCGCC 2 cut(s) 1009, 2647
PpsI GAGTC 5 cut(s) 437, 974, 2072, 2145, 2983
Ppu21I YACGTR 2 cut(s) 297, 1932
PscI ACATGT 1 cut(s) 3173
PshAI GACNNNNGTC 1 cut(s) 1856
PsiI TTATAA 1 cut(s) 2540
Psp1406I AACGTT 1 cut(s) 1368
Psp6I CCWGG 5 cut(s) 629, 1225, 1271, 1489, 2264
PspGI CCWGG 5 cut(s) 629, 1225, 1271, 1489, 2264
PspN4I GGNNCC 4 cut(s) 1007, 1872, 2345, 2645
PspPI GGNCC 2 cut(s) 1870, 2720
PspXI VCTCGAGB 1 cut(s) 2984
PstI CTGCAG 3 cut(s) 1087, 1456, 3196
PsuI RGATCY 3 cut(s) 1528, 2343, 3196
RruI TCGCGA 1 cut(s) 528
RsaI GTAC 6 cut(s) 299, 1934, 2797, 2909, 3343, 3381
RsaNI GTAC 6 cut(s) 298, 1933, 2796, 2908, 3342, 3380
RseI CAYNNNNRTG 1 cut(s) 2465
SalI GTCGAC 1 cut(s) 1625
SaqAI TTAA 9 cut(s) 452, 794, 1026, 1307, 1575, 1587, 2664, 2844, 3060
SatI GCNGC 4 cut(s) 1083, 3066, 3192, 3439
Sau3AI GATC 7 cut(s) 1201, 1528, 1546, 2158, 2343, 2743, 3196
Sau96I GGNCC 2 cut(s) 1870, 2720
SchI GAGTC 5 cut(s) 437, 974, 2072, 2145, 2984
ScrFI CCNGG 5 cut(s) 631, 1227, 1273, 1491, 2266
SduI GDGCHC 1 cut(s) 603
SfaNI GCATC 7 cut(s) 788, 1387, 1914, 2190, 2446, 3202, 3416
SfcI CTRYAG 5 cut(s) 1083, 1380, 1452, 1533, 3192
SfoI GGCGCC 2 cut(s) 1007, 2645
Sfr274I CTCGAG 1 cut(s) 2984
SinI GGWCC 1 cut(s) 2720
SlaI CTCGAG 1 cut(s) 2984
SmiMI CAYNNNNRTG 1 cut(s) 2465
SmlI CTYRAG 6 cut(s) 497, 1123, 1574, 2132, 2953, 2984
SmoI CTYRAG 6 cut(s) 497, 1123, 1574, 2132, 2953, 2984
SseBI AGGCCT 3 cut(s) 1335, 1697, 2524
SsiI CCGC 3 cut(s) 55, 3066, 3441
SspDI GGCGCC 2 cut(s) 1005, 2643
SspI AATATT 1 cut(s) 1475
StuI AGGCCT 3 cut(s) 1335, 1697, 2524
StyD4I CCNGG 5 cut(s) 629, 1225, 1271, 1489, 2264
StyI CCWWGG 6 cut(s) 184, 377, 1017, 1656, 2012, 2655
TaaI ACNGT 9 cut(s) 131, 837, 947, 1594, 2672, 2888, 3219, 3262, 3287
TaiI ACGT 4 cut(s) 299, 1371, 1934, 2913
TauI GCSGC 1 cut(s) 3068
TfiI GAWTC 6 cut(s) 92, 706, 1322, 1815, 2326, 2969
Tru1I TTAA 9 cut(s) 452, 794, 1026, 1307, 1575, 1587, 2664, 2844, 3060
Tru9I TTAA 9 cut(s) 452, 794, 1026, 1307, 1575, 1587, 2664, 2844, 3060
TscAI CASTG 3 cut(s) 134, 3009, 3222
TseFI GTSAC 4 cut(s) 831, 2469, 2976, 3281
TseI GCWGC 3 cut(s) 1082, 3191, 3438
Tsp45I GTSAC 4 cut(s) 831, 2469, 2976, 3281
TspGWI ACGGA 4 cut(s) 1203, 1257, 1474, 1808
TspRI CASTG 3 cut(s) 134, 3009, 3222
Van91I CCANNNNNTGG 1 cut(s) 41
Vha464I CTTAAG 1 cut(s) 1574
VpaK11BI GGWCC 1 cut(s) 2720
XapI RAATTY 4 cut(s) 1036, 1429, 2207, 3094
XceI RCATGY 1 cut(s) 3177
XhoI CTCGAG 1 cut(s) 2984
XmiI GTMKAC 4 cut(s) 760, 942, 1383, 1626
XmnI GAANNNNTTC 2 cut(s) 572, 870
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.