Rroxscaffold_1G00042180

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000264
Physical Location & Seq
Reverse (-)
60259593 .. 60261197
1605 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00042180.1

Sequence Viewer

Length: 1605 bp
ATGAACAGTGGGACTTTCTTGGAGCACGAAGCATTCCTTGCATTTTGGTTATCAAGGTATGTATTTCCGGATGCTCGTAGTACAATACAAAAGCATGTTTTCCCAATTGCAATTCATTTAGCTAGGGGCACCCGAATTGCACTTGCACCTGCTGTTCTTGCAAGTATTTATAAGGACTTGACTTTGTTGAAATGCGCAATTGTGGATTCAAGTAAGTTAAGGACAGGTTGTGATGCTATAAAACTCAGCATCAAGTCACCATTTCAGTTTGTTCAACTTTGGGCGTGGGAAAGATTTGTAGAGCTGAGTCCAAATCCCAGAATGATCAATTTTGCGCAGCCAAGATTGGCTCGATGGGACAAAGTAAGTGGCGTGGAAGTTGAAAACTTGAGGAAGGTTTTAGACTCTGCCGGAGATGGTTTCAAGTGGCGTCCTTATGCCTTGACCGTTGAAAACTGGCAGTTACCCAAGTACTATCCTGTAGAGGGAATGCATGTATCAGATTGTTGGGGTTTGGATGATGAGTTGCATTCATTTTTCAGATGCTTGAGGGTTAGTGAGTTAGCTGGATTCGGTACCATTGAGCAGTACCTTCCGCATAGAGTAGCAATGCAATTTGGTTTTGATCAAGACATTCCATGCATTGTGGCTCGATCCAATCAAAGTTCTGATATAGCCTGGAATCATTACATCAAGGAAATTCAGAATGCAAGGTTGTATGTTCCATCCACCCTTTCAAAGGCAGTTATTAGCACAAGATACTTGAAGTGGTGGAAGGAATCAGTGTTGGGTCTCAAAAAGTCCACCATGTCAAAATTAGAAAATTCAAAATGCATGGGAGGATCCCTACCTAGGGCTAAACCTGCCCCTGTAGATCCTGGTTCTGCCCCAGAGAAAGCTGTAGAGGGTTCTAAGAAACGGAAGAAGAATAATGATTTCACTCTTCCTTCTGTTTCTGTTCCTAAGTACTCAGATGAAGGTAATGATTCCCTTGTTCCGTCAGGATTTCCTCCCAAATGTAGTATAATGGAAGATGGAGGTTCAGTGGATGAAGATGGACTAACTTTATCAGAAATTTGGAAATATTGTAAGAAACAGAAAAATGTAAATACGAGAACACGTGGTCAGCATAAGAAGTTAGCAGGTCAAGTTCAAAGTCTGGCATCTTCAATTGGAGCAAGTTCTGTTGATACTATGAAGTCAGAGAGGTTGGAAGATAGAGGTCCGATAGACGAGGATGGACCAAGTTTATCAGAAACTTTTGAAAATTCTAAGAAACATAAAAATGGTGACACTAGAATGTGTGGTGACAGTGAGAAATTATCAGGTCAAGGTCAAGATCTGGCATCTTCAATTGCAGAAAGTTCTGTTGACACTATAAACTCAGAGAAATTGGTGACAGAGGACATGTTGAATGAAGTTTTGATTGGAAGATTCAAGGCCGAAAGAAACCAGAAAACTGTAATGAGGAGTAATGCAAGAAGTTCAGATAATGAGATGGCAAGCATCGTTGACAATGAATATGCTAGCAACAGCTCTCAAATTGAGAAACGGGTTTCAGTGCTTAAAGCTAGGGCCAGCAGGCTTGACTGCTTGAGAGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

534

Amino Acids

59.72

Weight (kDa)

8.79

Isoelectric Point (pI)

41.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 3 - 259 2e-70 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000264)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48145 AT1G50745
fragaria_vesca FvH4_3g22280 FvH4_3g22281 FvH4_3g22290 FvH4_3g22300 FvH4_3g22321 FvH4_3g22330 FvH4_3g22330 FvH4_3g22331
rosa_chinensis RchiOBHm_Chr5g0038351 RchiOBHm_Chr5g0038361 RchiOBHm_Chr5g0038371 RchiOBHm_Chr5g0038381 RchiOBHm_Chr5g0038421 RchiOBHm_Chr5g0038451 RchiOBHm_Chr5g0038471 RchiOBHm_Chr5g0038491 RchiOBHm_Chr5g0038561 RchiOBHm_Chr5g0038731 RchiOBHm_Chr5g0038741 RchiOBHm_Chr5g0038771 RchiOBHm_Chr5g0038781 RchiOBHm_Chr5g0038791 RchiOBHm_Chr5g0038801 RchiOBHm_Chr5g0038831
rosa_laevigata RLG00000008815 RLG00000020213 RLG00000033850 RLG00000033864 RLG00000033875
rosa_multiflora Rmu_co8006804.1_g000001 Rmu_co8168012.1_g000001 Rmu_co8236409.1_g000001 Rmu_co8247247.1_g000001 Rmu_co8440391.1_g000001 Rmu_sc0000533.1_g000088 Rmu_sc0003198.1_g000005 Rmu_sc0003198.1_g000006 Rmu_sc0003198.1_g000007 Rmu_sc0003198.1_g000008 Rmu_sc0003198.1_g000013 Rmu_sc0005722.1_g000005 Rmu_sc0005722.1_g000007 Rmu_sc0005722.1_g000012 Rmu_sc0005722.1_g000013 Rmu_sc0005836.1_g000001 Rmu_sc0009149.1_g000006 Rmu_sc0009149.1_g000018 Rmu_sc0009149.1_g000020 Rmu_sc0017397.1_g000004 Rmu_sc0025071.1_g000001 Rmu_sc0032545.1_g000001 Rmu_sc0038346.1_g000001
rosa_roxburghii Rroxscaffold_1G00042150 Rroxscaffold_1G00042180 Rroxscaffold_1G00042230 Rroxscaffold_1G00042240 Rroxscaffold_1G00042260 Rroxscaffold_1G00042320 Rroxscaffold_1G00042330 Rroxscaffold_1G00042350 Rroxscaffold_1G00042360 Rroxscaffold_1G00042370 Rroxscaffold_1G00042400 Rroxscaffold_1G00042430 Rroxscaffold_1G00042440 Rroxscaffold_1G00042510 Rroxscaffold_1G00042580 Rroxscaffold_1G00042620
rosa_rugosa Rorug05G0172200 Rorug05G0172300 Rorug05G0172500 Rorug05G0173100 Rorug05G0173200.1 Rorug05G0173600 Rorug05G0173800 Rorug05G0174000 Rorug05G0174100 Rorug05G0174200 Rorug05G0174200 Rorug05G0174400 Rorug05G0174500 Rorug05G0174600 Rorug05G0174700 Rorug05G0174800
rosa_samantha Rh5AG259600 Rh5AG260200 Rh5AG260600 Rh5AG260800 Rh5AG261300 Rh5AG261400 Rh5AG261500 Rh5AG261700 Rh5AG261900 Rh5BG263600 Rh5BG264200 Rh5BG264500 Rh5BG264800 Rh5BG265100 Rh5BG265200 Rh5BG265500 Rh5BG265600 Rh5BG266000 Rh5CG295900 Rh5CG296700 Rh5CG296800 Rh5CG296900 Rh5CG297200 Rh5CG297700 Rh5CG297900 Rh5CG298100 Rh5CG298200 Rh5CG298300 Rh5CG298400 Rh5CG298500 Rh5CG298900 Rh5CG299200 Rh6DG125700
rosa_wichuraiana Rw0G001950 Rw0G001960 Rw0G013290 Rw5G024020 Rw5G024310 Rw5G024340 Rw5G024350 Rw5G024370 Rw5G024380 Rw5G024390 Rw5G024400 Rw5G024420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 171
AarI CACCTGC 1 cut(s) 157
Acc16I TGCGCA 2 cut(s) 196, 336
Acc36I ACCTGC 3 cut(s) 157, 871, 1133
Acc65I GGTACC 1 cut(s) 575
AccB1I GGYRCC 2 cut(s) 128, 575
AccIII TCCGGA 1 cut(s) 67
AciI CCGC 1 cut(s) 596
AclWI GGATC 4 cut(s) 648, 837, 850, 869
AcsI RAATTY 4 cut(s) 699, 823, 1074, 1267
AcvI CACGTG 1 cut(s) 1121
AcyI GRCGYC 1 cut(s) 430
AfaI GTAC 5 cut(s) 82, 473, 577, 590, 968
AfiI CCNNNNNNNGG 4 cut(s) 485, 739, 852, 853
AflIII ACRYGT 2 cut(s) 1118, 1407
AjnI CCWGG 2 cut(s) 677, 877
AjuI GAANNNNNNNTTGG 2 cut(s) 1410, 1442
AluBI AGCT 6 cut(s) 122, 304, 566, 899, 1536, 1571
AluI AGCT 6 cut(s) 122, 304, 566, 899, 1536, 1571
Alw21I GWGCWC 1 cut(s) 27
Alw26I GTCTC 1 cut(s) 797
AlwI GGATC 4 cut(s) 648, 837, 850, 869
Aor13HI TCCGGA 1 cut(s) 67
AoxI GGCC 2 cut(s) 1440, 1575
ApeKI GCWGC 1 cut(s) 337
ApoI RAATTY 4 cut(s) 699, 823, 1074, 1267
Asp718I GGTACC 1 cut(s) 575
AspA2I CCTAGG 1 cut(s) 851
AspLEI GCGC 2 cut(s) 197, 337
AspS9I GGNCC 3 cut(s) 1223, 1241, 1575
AsuHPI GGTGA 4 cut(s) 249, 1301, 1319, 1408
AsuNHI GCTAGC 1 cut(s) 1526
AvaII GGWCC 2 cut(s) 1223, 1241
AvrII CCTAGG 1 cut(s) 851
BaeGI GKGCMC 1 cut(s) 131
BamHI GGATCC 1 cut(s) 842
BanI GGYRCC 2 cut(s) 128, 575
BbrPI CACGTG 1 cut(s) 1121
Bbv12I GWGCWC 1 cut(s) 27
BbvI GCAGC 1 cut(s) 349
BccI CCATC 7 cut(s) 348, 410, 733, 1028, 1049, 1232, 1492
BciT130I CCWGG 2 cut(s) 679, 879
BclI TGATCA 2 cut(s) 324, 625
BcoDI GTCTC 1 cut(s) 797
BfaI CTAG 5 cut(s) 123, 852, 1296, 1527, 1572
BfmI CTRYAG 3 cut(s) 480, 870, 900
BfuAI ACCTGC 3 cut(s) 157, 871, 1133
BglII AGATCT 1 cut(s) 1339
BisI GCNGC 1 cut(s) 338
BlnI CCTAGG 1 cut(s) 851
BlsI GCNGC 1 cut(s) 339
BmcAI AGTACT 2 cut(s) 473, 968
Bme1390I CCNGG 2 cut(s) 679, 879
Bme18I GGWCC 2 cut(s) 1223, 1241
BmgT120I GGNCC 3 cut(s) 1223, 1241, 1575
BmiI GGNNCC 3 cut(s) 130, 577, 844
BmrFI CCNGG 2 cut(s) 679, 879
BmsI GCATC 7 cut(s) 61, 223, 258, 533, 1172, 1355, 1515
BmtI GCTAGC 1 cut(s) 1530
BpuEI CTTGAG 2 cut(s) 409, 568
BsaAI YACGTR 1 cut(s) 1121
BsaHI GRCGYC 1 cut(s) 430
BsaI GGTCTC 1 cut(s) 797
BsaJI CCNNGG 1 cut(s) 851
BsaWI WCCGGW 1 cut(s) 67
BsaXI ACNNNNNCTCC 2 cut(s) 1029, 1059
Bsc4I CCNNNNNNNGG 4 cut(s) 485, 739, 852, 853
Bse1I ACTGG 1 cut(s) 461
Bse3DI GCAATG 1 cut(s) 615
BseAI TCCGGA 1 cut(s) 67
BseBI CCWGG 2 cut(s) 679, 879
BseDI CCNNGG 1 cut(s) 851
BseGI GGATG 5 cut(s) 76, 523, 725, 1054, 1243
BseLI CCNNNNNNNGG 4 cut(s) 485, 739, 852, 853
BseMI GCAATG 1 cut(s) 615
BseMII CTCAG 4 cut(s) 259, 296, 984, 1398
BseNI ACTGG 1 cut(s) 461
BseRI GAGGAG 1 cut(s) 1483
BseSI GKGCMC 1 cut(s) 131
BseXI GCAGC 1 cut(s) 349
BshFI GGCC 2 cut(s) 1442, 1577
BshNI GGYRCC 2 cut(s) 128, 575
BsiHKAI GWGCWC 1 cut(s) 27
BsiSI CCGG 2 cut(s) 68, 411
BslFI GGGAC 2 cut(s) 25, 371
BslI CCNNNNNNNGG 4 cut(s) 485, 739, 852, 853
BsmAI GTCTC 1 cut(s) 797
BsmFI GGGAC 2 cut(s) 25, 371
BsmI GAATGC 4 cut(s) 32, 495, 529, 712
BsnI GGCC 2 cut(s) 1442, 1577
Bso31I GGTCTC 1 cut(s) 797
Bsp1286I GDGCHC 2 cut(s) 27, 131
Bsp13I TCCGGA 1 cut(s) 67
Bsp143I GATC 6 cut(s) 324, 625, 653, 842, 874, 1339
BspACI CCGC 1 cut(s) 596
BspANI GGCC 2 cut(s) 1442, 1577
BspCNI CTCAG 4 cut(s) 258, 297, 983, 1397
BspEI TCCGGA 1 cut(s) 67
BspLI GGNNCC 3 cut(s) 130, 577, 844
BspMI ACCTGC 3 cut(s) 157, 871, 1133
BspOI GCTAGC 1 cut(s) 1530
BspPI GGATC 4 cut(s) 648, 837, 850, 869
BspT107I GGYRCC 2 cut(s) 128, 575
BspTNI GGTCTC 1 cut(s) 797
BsrDI GCAATG 1 cut(s) 615
BsrI ACTGG 1 cut(s) 461
BssECI CCNNGG 1 cut(s) 851
BssMI GATC 6 cut(s) 324, 625, 653, 842, 874, 1339
BssNI GRCGYC 1 cut(s) 430
BssT1I CCWWGG 1 cut(s) 851
Bst2UI CCWGG 2 cut(s) 679, 879
Bst4CI ACNGT 4 cut(s) 8, 448, 1313, 1462
Bst6I CTCTTC 1 cut(s) 948
BstACI GRCGYC 1 cut(s) 430
BstAPI GCANNNNNTGC 1 cut(s) 38
BstBAI YACGTR 1 cut(s) 1121
BstC8I GCNNGC 4 cut(s) 1504, 1528, 1579, 1583
BstDEI CTNAG 7 cut(s) 245, 305, 912, 963, 970, 1272, 1384
BstENI CCTNNNNNAGG 1 cut(s) 737
BstF5I GGATG 5 cut(s) 76, 523, 725, 1054, 1243
BstHHI GCGC 2 cut(s) 197, 337
BstKTI GATC 6 cut(s) 327, 628, 656, 845, 877, 1342
BstMAI GTCTC 1 cut(s) 797
BstMBI GATC 6 cut(s) 324, 625, 653, 842, 874, 1339
BstMWI GCNNNNNNNGC 3 cut(s) 38, 158, 863
BstNI CCWGG 2 cut(s) 679, 879
BstNSI RCATGY 3 cut(s) 98, 497, 1411
BstSCI CCNGG 2 cut(s) 677, 877
BstSFI CTRYAG 3 cut(s) 480, 870, 900
BstSLI GKGCMC 1 cut(s) 131
BstV1I GCAGC 1 cut(s) 349
BstX2I RGATCY 3 cut(s) 842, 874, 1339
BstYI RGATCY 3 cut(s) 842, 874, 1339
BsuRI GGCC 2 cut(s) 1442, 1577
BtsCI GGATG 5 cut(s) 76, 523, 725, 1054, 1243
BtsIMutI CAGTG 5 cut(s) 13, 789, 1050, 1318, 1566
BveI ACCTGC 3 cut(s) 157, 871, 1133
Cac8I GCNNGC 4 cut(s) 1504, 1528, 1579, 1583
CfoI GCGC 2 cut(s) 197, 337
Cfr13I GGNCC 3 cut(s) 1223, 1241, 1575
CseI GACGC 1 cut(s) 419
Csp6I GTAC 5 cut(s) 81, 472, 576, 589, 967
CspCI CAANNNNNGTGG 2 cut(s) 349, 384
CviAII CATG 6 cut(s) 95, 494, 639, 808, 835, 1408
CviQI GTAC 5 cut(s) 81, 472, 576, 589, 967
DdeI CTNAG 7 cut(s) 245, 305, 912, 963, 970, 1272, 1384
DpnI GATC 6 cut(s) 326, 627, 655, 844, 876, 1341
DpnII GATC 6 cut(s) 324, 625, 653, 842, 874, 1339
Eam1104I CTCTTC 1 cut(s) 948
EarI CTCTTC 1 cut(s) 948
Eco130I CCWWGG 1 cut(s) 851
Eco31I GGTCTC 1 cut(s) 797
Eco47I GGWCC 2 cut(s) 1223, 1241
Eco72I CACGTG 1 cut(s) 1121
EcoNI CCTNNNNNAGG 1 cut(s) 737
EcoRII CCWGG 2 cut(s) 677, 877
EcoT14I CCWWGG 1 cut(s) 851
EcoT22I ATGCAT 3 cut(s) 495, 644, 836
ErhI CCWWGG 1 cut(s) 851
FaeI CATG 6 cut(s) 98, 497, 642, 811, 838, 1411
FalI AAGNNNNNCTT 2 cut(s) 21, 53
FaqI GGGAC 2 cut(s) 25, 371
FatI CATG 6 cut(s) 94, 493, 638, 807, 834, 1407
FbaI TGATCA 2 cut(s) 324, 625
Fnu4HI GCNGC 1 cut(s) 338
FokI GGATG 5 cut(s) 83, 530, 712, 1061, 1250
Fsp4HI GCNGC 1 cut(s) 338
FspBI CTAG 5 cut(s) 123, 852, 1296, 1527, 1572
FspI TGCGCA 2 cut(s) 196, 336
GlaI GCGC 2 cut(s) 196, 336
GluI GCNGC 1 cut(s) 338
HaeIII GGCC 2 cut(s) 1442, 1577
HapII CCGG 2 cut(s) 68, 411
HgaI GACGC 1 cut(s) 419
HhaI GCGC 2 cut(s) 197, 337
Hin1I GRCGYC 1 cut(s) 430
Hin1II CATG 6 cut(s) 98, 497, 642, 811, 838, 1411
Hin6I GCGC 2 cut(s) 195, 335
HinP1I GCGC 2 cut(s) 195, 335
HincII GTYRAC 2 cut(s) 1372, 1513
HindII GTYRAC 2 cut(s) 1372, 1513
HinfI GANTC 8 cut(s) 206, 307, 404, 570, 682, 779, 986, 1434
HpaII CCGG 2 cut(s) 68, 411
HphI GGTGA 4 cut(s) 249, 1301, 1319, 1408
Hpy166II GTNNAC 3 cut(s) 804, 1372, 1513
Hpy188III TCNNGA 4 cut(s) 68, 629, 1002, 1337
Hpy8I GTNNAC 3 cut(s) 804, 1372, 1513
HpyAV CCTTC 5 cut(s) 388, 602, 769, 957, 971
HpyCH4III ACNGT 4 cut(s) 8, 448, 1313, 1462
HpyCH4IV ACGT 1 cut(s) 1120
HpyF10VI GCNNNNNNNGC 3 cut(s) 38, 158, 863
HpyF3I CTNAG 7 cut(s) 245, 305, 912, 963, 970, 1272, 1384
HpySE526I ACGT 1 cut(s) 1120
Hsp92I GRCGYC 1 cut(s) 430
Hsp92II CATG 6 cut(s) 98, 497, 642, 811, 838, 1411
HspAI GCGC 2 cut(s) 195, 335
Kpn2I TCCGGA 1 cut(s) 67
KpnI GGTACC 1 cut(s) 579
Ksp22I TGATCA 2 cut(s) 324, 625
Kzo9I GATC 6 cut(s) 324, 625, 653, 842, 874, 1339
LmnI GCTCC 2 cut(s) 22, 1175
Lsp1109I GCAGC 1 cut(s) 349
LweI GCATC 7 cut(s) 61, 223, 258, 533, 1172, 1355, 1515
MaeI CTAG 5 cut(s) 123, 852, 1296, 1527, 1572
MaeII ACGT 1 cut(s) 1120
MaeIII GTNAC 5 cut(s) 255, 462, 1289, 1307, 1396
MalI GATC 6 cut(s) 326, 627, 655, 844, 876, 1341
MboI GATC 6 cut(s) 324, 625, 653, 842, 874, 1339
MboII GAAGA 9 cut(s) 934, 935, 937, 1043, 1064, 1158, 1226, 1341, 1443
MfeI CAATTG 4 cut(s) 105, 198, 1170, 1353
MflI RGATCY 3 cut(s) 842, 874, 1339
MhlI GDGCHC 2 cut(s) 27, 131
MlyI GAGTC 2 cut(s) 316, 398
MmeI TCCRAC 1 cut(s) 1191
Mph1103I ATGCAT 3 cut(s) 495, 644, 836
MroI TCCGGA 1 cut(s) 67
MseI TTAA 2 cut(s) 218, 1566
MslI CAYNNNNRTG 2 cut(s) 1284, 1298
MspI CCGG 2 cut(s) 68, 411
MspR9I CCNGG 2 cut(s) 679, 879
MunI CAATTG 4 cut(s) 105, 198, 1170, 1353
Mva1269I GAATGC 4 cut(s) 32, 495, 529, 712
MvaI CCWGG 2 cut(s) 679, 879
MwoI GCNNNNNNNGC 3 cut(s) 38, 158, 863
NdeII GATC 6 cut(s) 324, 625, 653, 842, 874, 1339
NheI GCTAGC 1 cut(s) 1526
NlaIII CATG 6 cut(s) 98, 497, 642, 811, 838, 1411
NlaIV GGNNCC 3 cut(s) 130, 577, 844
NmuCI GTSAC 4 cut(s) 255, 1289, 1307, 1396
NsbI TGCGCA 2 cut(s) 196, 336
NsiI ATGCAT 3 cut(s) 495, 644, 836
NspI RCATGY 3 cut(s) 98, 497, 1411
PaqCI CACCTGC 1 cut(s) 157
PciI ACATGT 1 cut(s) 1407
PctI GAATGC 4 cut(s) 32, 495, 529, 712
PfeI GAWTC 6 cut(s) 206, 570, 682, 779, 986, 1434
PkrI GCNGC 1 cut(s) 339
PleI GAGTC 2 cut(s) 315, 398
PmaCI CACGTG 1 cut(s) 1121
PmlI CACGTG 1 cut(s) 1121
PpsI GAGTC 2 cut(s) 315, 398
Ppu21I YACGTR 1 cut(s) 1121
PscI ACATGT 1 cut(s) 1407
PsiI TTATAA 1 cut(s) 171
Psp6I CCWGG 2 cut(s) 677, 877
PspCI CACGTG 1 cut(s) 1121
PspGI CCWGG 2 cut(s) 677, 877
PspN4I GGNNCC 3 cut(s) 130, 577, 844
PspPI GGNCC 3 cut(s) 1223, 1241, 1575
PsuI RGATCY 3 cut(s) 842, 874, 1339
RsaI GTAC 5 cut(s) 82, 473, 577, 590, 968
RsaNI GTAC 5 cut(s) 81, 472, 576, 589, 967
RseI CAYNNNNRTG 2 cut(s) 1284, 1298
SaqAI TTAA 2 cut(s) 218, 1566
SatI GCNGC 1 cut(s) 338
Sau3AI GATC 6 cut(s) 324, 625, 653, 842, 874, 1339
Sau96I GGNCC 3 cut(s) 1223, 1241, 1575
ScaI AGTACT 2 cut(s) 473, 968
SchI GAGTC 2 cut(s) 316, 398
ScrFI CCNGG 2 cut(s) 679, 879
SduI GDGCHC 2 cut(s) 27, 131
SfaNI GCATC 7 cut(s) 61, 223, 258, 533, 1172, 1355, 1515
SfcI CTRYAG 3 cut(s) 480, 870, 900
SinI GGWCC 2 cut(s) 1223, 1241
SmiMI CAYNNNNRTG 2 cut(s) 1284, 1298
SmlI CTYRAG 3 cut(s) 388, 547, 1594
SmoI CTYRAG 3 cut(s) 388, 547, 1594
SsiI CCGC 1 cut(s) 596
SspI AATATT 1 cut(s) 1085
SspMI CTAG 5 cut(s) 123, 852, 1296, 1527, 1572
StyD4I CCNGG 2 cut(s) 677, 877
StyI CCWWGG 1 cut(s) 851
TaaI ACNGT 4 cut(s) 8, 448, 1313, 1462
TaiI ACGT 1 cut(s) 1123
TaqI TCGA 2 cut(s) 352, 652
TatI WGTACW 3 cut(s) 80, 471, 966
TfiI GAWTC 6 cut(s) 206, 570, 682, 779, 986, 1434
Tru1I TTAA 2 cut(s) 218, 1566
Tru9I TTAA 2 cut(s) 218, 1566
TscAI CASTG 5 cut(s) 13, 789, 1050, 1318, 1566
TseFI GTSAC 4 cut(s) 255, 1289, 1307, 1396
TseI GCWGC 1 cut(s) 337
Tsp45I GTSAC 4 cut(s) 255, 1289, 1307, 1396
TspDTI ATGAA 8 cut(s) 17, 104, 522, 990, 1065, 1211, 1431, 1533
TspGWI ACGGA 2 cut(s) 934, 987
TspRI CASTG 5 cut(s) 13, 789, 1050, 1318, 1566
VpaK11BI GGWCC 2 cut(s) 1223, 1241
XagI CCTNNNNNAGG 1 cut(s) 737
XapI RAATTY 4 cut(s) 699, 823, 1074, 1267
XceI RCATGY 3 cut(s) 98, 497, 1411
XmaJI CCTAGG 1 cut(s) 851
XspI CTAG 5 cut(s) 123, 852, 1296, 1527, 1572
ZrmI AGTACT 2 cut(s) 473, 968
Zsp2I ATGCAT 3 cut(s) 495, 644, 836
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.