Rmu_sc0005722.1_g000012

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005722.1
OG0000264
Physical Location & Seq
Forward (+)
63523 .. 65786
2264 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005722.1_g000012.1.cds

Sequence Viewer

Length: 2079 bp
atgtcccaacattcctctcagtccaaaaggccaaagctttctctgttcaaggagactccaccggacacgacggtcgaagagcaacaagacgcggccatggtgtcttcaactggtggacacccatttcgcaaaaatgcctactttctcaaacccattgccccatattcctccattgatgaacctcctttcaagctccctctctgtttttcctccctcccttcccgttttgacccaaaaggctggccattgaagcttcattttactgggtggcgtctcgaccactacgatttgcagacttgggtcgaacgcttggcccccattcaccaatggacatggaagaaagctggtatttatgaagccatcttcagttccacttacgaaatcaataggagaaaggatttggtttgtgggtttgcagagaaatggtgttgtgagaccaacacattcatctttccttggggtgaagcaaccatcacattggaggatgttatggttttgggaggcttttcggttctgggtgactctgttttcagccctcttaaaagcacagagctgaaggaagtagaagagaaacttgagcagaagcgactgggactccgcacttgcacgactgttcacacaagattatggatggagaaattcatgaatagtgggactgaactggagcacgaagcatttcttgtcttttggttggccagggggattcgagttgcgcttgcaccggctgttcttgccagcatttacaaagatttgagtatcttaaaaacgactcttgtatcagatgaattcagaacctgtgatgatgtcttaaaactcaccattcactcaccatttcaattagttcaggtttgggcatgggagaggtttttggaacttaggccaaaacccaatgttattagctatggtgagccaaggatggctcgatgggataaagtagatggtctgaatgttcaaaattggaggagggttttagactccgccggggaagatttcatgtggcgcccttatgccatggccattgagaactggaatcctaaatactatttggaaaaggaaatgagggtttgtcctggtttggatgatgaactcctgtcatttgccatatgcttgaggctgactgagttagatgggttcggtactacaacacaataccttcctcatagggtagctaggcaatttggatttgatcaagacattccatgttccgttgatagatccgacaaagattccaatatgctttgtggaaaagaagatcctcatagagcctggaaacatcacattagggaaattaagaatgtaaaattgtatgttccatctagactttctgaggcagatgtgagcacaagatacctgaaatggtgggaggaaacagtgtcctgtatcaagcacatgagagagcctagcatgccagaaaaaaagaaagaaaacagtactcaaggatcactaccaaaggataaacatgtccccatgcatcctgggtttctgccaaagaaagttgttaaaggttcaacagaaaggaacatgattactgatttcaccattccttcagtttcttacctaaaaagtttggaaaaactagtgcaggcctcaaaaggaagcaatgagggtaatgattccttttttcctccagggtttcctcccagaggtgataggattgaagctggagctcctatggatgatgaagaaaatgtcaaaactagaaaacgtggtgacaaagagaagttatcaggtgaagttcagaatttggaatcttcaatgtcctttgaaggttctaataattgtatgctatcaggaaaaattgagaaagagataagcttgagtgaagctttggttggcggatccaaggcgaagtcaaacgttgaaactatcaaggggtatactgcaagaagtcaagccatgaacactgtaagtatcacggccaataattgtgcttgtagtagctctttattggagatactgtttaccctaaaagagttccagaaacagttttcagaacttaaagcaaaggttagcaggcttgaaagtgtggtggacatgtcacaagcaaacgctaaaggagcgagttttaggaataactaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

692

Amino Acids

78.93

Weight (kDa)

8.05

Isoelectric Point (pI)

42.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000264)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48145 AT1G50745
fragaria_vesca FvH4_3g22280 FvH4_3g22281 FvH4_3g22290 FvH4_3g22300 FvH4_3g22321 FvH4_3g22330 FvH4_3g22330 FvH4_3g22331
rosa_chinensis RchiOBHm_Chr5g0038351 RchiOBHm_Chr5g0038361 RchiOBHm_Chr5g0038371 RchiOBHm_Chr5g0038381 RchiOBHm_Chr5g0038421 RchiOBHm_Chr5g0038451 RchiOBHm_Chr5g0038471 RchiOBHm_Chr5g0038491 RchiOBHm_Chr5g0038561 RchiOBHm_Chr5g0038731 RchiOBHm_Chr5g0038741 RchiOBHm_Chr5g0038771 RchiOBHm_Chr5g0038781 RchiOBHm_Chr5g0038791 RchiOBHm_Chr5g0038801 RchiOBHm_Chr5g0038831
rosa_laevigata RLG00000008815 RLG00000020213 RLG00000033850 RLG00000033864 RLG00000033875
rosa_multiflora Rmu_co8006804.1_g000001 Rmu_co8168012.1_g000001 Rmu_co8236409.1_g000001 Rmu_co8247247.1_g000001 Rmu_co8440391.1_g000001 Rmu_sc0000533.1_g000088 Rmu_sc0003198.1_g000005 Rmu_sc0003198.1_g000006 Rmu_sc0003198.1_g000007 Rmu_sc0003198.1_g000008 Rmu_sc0003198.1_g000013 Rmu_sc0005722.1_g000005 Rmu_sc0005722.1_g000007 Rmu_sc0005722.1_g000012 Rmu_sc0005722.1_g000013 Rmu_sc0005836.1_g000001 Rmu_sc0009149.1_g000006 Rmu_sc0009149.1_g000018 Rmu_sc0009149.1_g000020 Rmu_sc0017397.1_g000004 Rmu_sc0025071.1_g000001 Rmu_sc0032545.1_g000001 Rmu_sc0038346.1_g000001
rosa_roxburghii Rroxscaffold_1G00042150 Rroxscaffold_1G00042180 Rroxscaffold_1G00042230 Rroxscaffold_1G00042240 Rroxscaffold_1G00042260 Rroxscaffold_1G00042320 Rroxscaffold_1G00042330 Rroxscaffold_1G00042350 Rroxscaffold_1G00042360 Rroxscaffold_1G00042370 Rroxscaffold_1G00042400 Rroxscaffold_1G00042430 Rroxscaffold_1G00042440 Rroxscaffold_1G00042510 Rroxscaffold_1G00042580 Rroxscaffold_1G00042620
rosa_rugosa Rorug05G0172200 Rorug05G0172300 Rorug05G0172500 Rorug05G0173100 Rorug05G0173200.1 Rorug05G0173600 Rorug05G0173800 Rorug05G0174000 Rorug05G0174100 Rorug05G0174200 Rorug05G0174200 Rorug05G0174400 Rorug05G0174500 Rorug05G0174600 Rorug05G0174700 Rorug05G0174800
rosa_samantha Rh5AG259600 Rh5AG260200 Rh5AG260600 Rh5AG260800 Rh5AG261300 Rh5AG261400 Rh5AG261500 Rh5AG261700 Rh5AG261900 Rh5BG263600 Rh5BG264200 Rh5BG264500 Rh5BG264800 Rh5BG265100 Rh5BG265200 Rh5BG265500 Rh5BG265600 Rh5BG266000 Rh5CG295900 Rh5CG296700 Rh5CG296800 Rh5CG296900 Rh5CG297200 Rh5CG297700 Rh5CG297900 Rh5CG298100 Rh5CG298200 Rh5CG298300 Rh5CG298400 Rh5CG298500 Rh5CG298900 Rh5CG299200 Rh6DG125700
rosa_wichuraiana Rw0G001950 Rw0G001960 Rw0G013290 Rw5G024020 Rw5G024310 Rw5G024340 Rw5G024350 Rw5G024370 Rw5G024380 Rw5G024390 Rw5G024400 Rw5G024420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 71
AccB1I GGYRCC 1 cut(s) 999
AccI GTMKAC 1 cut(s) 1877
AccII CGCG 1 cut(s) 92
AciI CCGC 4 cut(s) 92, 598, 978, 1836
AclI AACGTT 1 cut(s) 1857
AclWI GGATC 5 cut(s) 1209, 1247, 1447, 1833, 1846
AcoI YGGCCR 5 cut(s) 93, 242, 693, 1014, 1917
AcsI RAATTY 3 cut(s) 638, 785, 1741
AcuI CTGAAG 3 cut(s) 349, 575, 1530
AcyI GRCGYC 2 cut(s) 271, 1000
AfaI GTAC 2 cut(s) 1138, 1432
AfiI CCNNNNNNNGG 1 cut(s) 1643
AflIII ACRYGT 2 cut(s) 1459, 2034
AhlI ACTAGT 1 cut(s) 1576
AjnI CCWGG 5 cut(s) 695, 1069, 1265, 1474, 1627
AjuI GAANNNNNNNTTGG 2 cut(s) 1815, 1847
Alw21I GWGCWC 3 cut(s) 669, 1343, 1669
Alw26I GTCTC 3 cut(s) 47, 278, 428
AlwI GGATC 5 cut(s) 1209, 1247, 1447, 1833, 1846
AlwNI CAGNNNCTG 1 cut(s) 795
AoxI GGCC 9 cut(s) 29, 93, 242, 312, 693, 878, 1014, 1584, 1917
ApoI RAATTY 3 cut(s) 638, 785, 1741
ArsI GACNNNNNNTTYG 2 cut(s) 108, 140
Asp700I GAANNNNTTC 1 cut(s) 675
AspLEI GCGC 2 cut(s) 715, 1002
AspS9I GGNCC 1 cut(s) 313
AsuC2I CCSGG 1 cut(s) 982
BaeI ACNNNNGTAYC 2 cut(s) 759, 792
BalI TGGCCA 3 cut(s) 244, 695, 1016
BamHI GGATCC 1 cut(s) 1838
BanI GGYRCC 1 cut(s) 999
BanII GRGCYC 1 cut(s) 1669
BbsI GAAGAC 1 cut(s) 96
Bbv12I GWGCWC 3 cut(s) 669, 1343, 1669
BccI CCATC 8 cut(s) 368, 479, 625, 910, 918, 932, 1121, 1321
BceAI ACGGC 1 cut(s) 1932
BciT130I CCWGG 5 cut(s) 697, 1071, 1267, 1476, 1629
BclI TGATCA 1 cut(s) 1186
BcnI CCSGG 1 cut(s) 982
BcoDI GTCTC 3 cut(s) 47, 278, 428
BcuI ACTAGT 1 cut(s) 1576
BfaI CTAG 5 cut(s) 1170, 1317, 1401, 1577, 1698
BfoI RGCGCY 1 cut(s) 1003
BisI GCNGC 1 cut(s) 93
BlsI GCNGC 1 cut(s) 94
BmcAI AGTACT 1 cut(s) 1432
Bme1390I CCNGG 6 cut(s) 697, 982, 1071, 1267, 1476, 1629
BmgT120I GGNCC 1 cut(s) 313
BmiI GGNNCC 3 cut(s) 315, 1001, 1840
BmrFI CCNGG 6 cut(s) 697, 982, 1071, 1267, 1476, 1629
BmrI ACTGGG 2 cut(s) 273, 599
BmsI GCATC 1 cut(s) 1480
BmuI ACTGGG 2 cut(s) 273, 599
BoxI GACNNNNGTC 1 cut(s) 299
BpiI GAAGAC 1 cut(s) 96
BpmI CTGGAG 3 cut(s) 683, 1611, 1683
BpuEI CTTGAG 4 cut(s) 596, 1129, 1419, 1837
BpuMI CCSGG 1 cut(s) 982
BsaHI GRCGYC 2 cut(s) 271, 1000
BsaI GGTCTC 1 cut(s) 428
BsaJI CCNNGG 9 cut(s) 96, 455, 696, 911, 981, 1011, 1475, 1628, 1842
BsaWI WCCGGW 1 cut(s) 61
BsaXI ACNNNNNCTCC 4 cut(s) 579, 609, 1943, 1973
Bsc4I CCNNNNNNNGG 1 cut(s) 1643
Bse118I RCCGGY 1 cut(s) 721
Bse1I ACTGG 5 cut(s) 115, 268, 594, 666, 1031
Bse3DI GCAATG 2 cut(s) 153, 1606
BseBI CCWGG 5 cut(s) 697, 1071, 1267, 1476, 1629
BseDI CCNNGG 9 cut(s) 96, 455, 696, 911, 981, 1011, 1475, 1628, 1842
BseGI GGATG 6 cut(s) 490, 636, 921, 1084, 1471, 1681
BseLI CCNNNNNNNGG 1 cut(s) 1643
BseMI GCAATG 2 cut(s) 153, 1606
BseMII CTCAG 3 cut(s) 32, 1110, 1317
BseNI ACTGG 5 cut(s) 115, 268, 594, 666, 1031
BseRI GAGGAG 1 cut(s) 976
BsgI GTGCAG 1 cut(s) 1601
Bsh1236I CGCG 1 cut(s) 92
Bsh1285I CGRYCG 1 cut(s) 75
BshFI GGCC 9 cut(s) 31, 95, 244, 314, 695, 880, 1016, 1586, 1919
BshNI GGYRCC 1 cut(s) 999
BsiEI CGRYCG 1 cut(s) 75
BsiHKAI GWGCWC 3 cut(s) 669, 1343, 1669
BsiSI CCGG 3 cut(s) 62, 722, 981
BslFI GGGAC 3 cut(s) 606, 667, 1448
BslI CCNNNNNNNGG 1 cut(s) 1643
BsmAI GTCTC 3 cut(s) 47, 278, 428
BsmBI CGTCTC 1 cut(s) 278
BsmFI GGGAC 3 cut(s) 606, 667, 1448
BsnI GGCC 9 cut(s) 31, 95, 244, 314, 695, 880, 1016, 1586, 1919
Bso31I GGTCTC 1 cut(s) 428
Bsp1286I GDGCHC 3 cut(s) 669, 1343, 1669
Bsp143I GATC 5 cut(s) 1186, 1214, 1252, 1439, 1838
Bsp19I CCATGG 2 cut(s) 96, 1011
BspACI CCGC 4 cut(s) 92, 598, 978, 1836
BspANI GGCC 9 cut(s) 31, 95, 244, 314, 695, 880, 1016, 1586, 1919
BspCNI CTCAG 3 cut(s) 31, 1111, 1318
BspFNI CGCG 1 cut(s) 92
BspHI TCATGA 1 cut(s) 642
BspLI GGNNCC 3 cut(s) 315, 1001, 1840
BspPI GGATC 5 cut(s) 1209, 1247, 1447, 1833, 1846
BspQI GCTCTTC 1 cut(s) 72
BspT107I GGYRCC 1 cut(s) 999
BspTNI GGTCTC 1 cut(s) 428
BsrDI GCAATG 2 cut(s) 153, 1606
BsrFI RCCGGY 1 cut(s) 721
BsrI ACTGG 5 cut(s) 115, 268, 594, 666, 1031
BssAI RCCGGY 1 cut(s) 721
BssECI CCNNGG 9 cut(s) 96, 455, 696, 911, 981, 1011, 1475, 1628, 1842
BssMI GATC 5 cut(s) 1186, 1214, 1252, 1439, 1838
BssNAI GTATAC 1 cut(s) 1878
BssNI GRCGYC 2 cut(s) 271, 1000
BssT1I CCWWGG 5 cut(s) 96, 455, 911, 1011, 1842
Bst1107I GTATAC 1 cut(s) 1878
Bst2UI CCWGG 5 cut(s) 697, 1071, 1267, 1476, 1629
Bst4CI ACNGT 7 cut(s) 73, 613, 1372, 1430, 1906, 1959, 1986
Bst6I CTCTTC 2 cut(s) 72, 561
BstACI GRCGYC 2 cut(s) 271, 1000
BstC8I GCNNGC 6 cut(s) 242, 717, 736, 1406, 1584, 2015
BstDEI CTNAG 4 cut(s) 18, 875, 1119, 1326
BstDSI CCRYGG 2 cut(s) 96, 1011
BstENI CCTNNNNNAGG 1 cut(s) 1641
BstF5I GGATG 6 cut(s) 490, 636, 921, 1084, 1471, 1681
BstFNI CGCG 1 cut(s) 92
BstH2I RGCGCY 1 cut(s) 1003
BstHHI GCGC 2 cut(s) 715, 1002
BstKTI GATC 5 cut(s) 1189, 1217, 1255, 1442, 1841
BstMAI GTCTC 3 cut(s) 47, 278, 428
BstMBI GATC 5 cut(s) 1186, 1214, 1252, 1439, 1838
BstMCI CGRYCG 1 cut(s) 75
BstMWI GCNNNNNNNGC 4 cut(s) 250, 731, 1405, 2057
BstNI CCWGG 5 cut(s) 697, 1071, 1267, 1476, 1629
BstNSI RCATGY 3 cut(s) 1408, 1463, 2038
BstPAI GACNNNNGTC 1 cut(s) 299
BstSCI CCNGG 6 cut(s) 695, 980, 1069, 1265, 1474, 1627
BstUI CGCG 1 cut(s) 92
BstV2I GAAGAC 1 cut(s) 96
BstX2I RGATCY 3 cut(s) 1214, 1252, 1838
BstXI CCANNNNNNTGG 2 cut(s) 240, 478
BstYI RGATCY 3 cut(s) 1214, 1252, 1838
BstZ17I GTATAC 1 cut(s) 1878
BsuRI GGCC 9 cut(s) 31, 95, 244, 314, 695, 880, 1016, 1586, 1919
BtgI CCRYGG 2 cut(s) 96, 1011
BtsCI GGATG 6 cut(s) 490, 636, 921, 1084, 1471, 1681
BtsIMutI CAGTG 2 cut(s) 1377, 1902
Cac8I GCNNGC 6 cut(s) 242, 717, 736, 1406, 1584, 2015
CaiI CAGNNNCTG 1 cut(s) 795
CciI TCATGA 1 cut(s) 642
CfoI GCGC 2 cut(s) 715, 1002
Cfr10I RCCGGY 1 cut(s) 721
Cfr13I GGNCC 1 cut(s) 313
CseI GACGC 2 cut(s) 98, 260
Csp6I GTAC 2 cut(s) 1137, 1431
CviQI GTAC 2 cut(s) 1137, 1431
DdeI CTNAG 4 cut(s) 18, 875, 1119, 1326
DinI GGCGCC 1 cut(s) 1001
DpnI GATC 5 cut(s) 1188, 1216, 1254, 1441, 1840
DpnII GATC 5 cut(s) 1186, 1214, 1252, 1439, 1838
DrdI GACNNNNNNGTC 1 cut(s) 71
DseDI GACNNNNNNGTC 1 cut(s) 71
EaeI YGGCCR 5 cut(s) 93, 242, 693, 1014, 1917
Eam1104I CTCTTC 2 cut(s) 72, 561
EarI CTCTTC 2 cut(s) 72, 561
EciI GGCGGA 2 cut(s) 967, 1851
Ecl136II GAGCTC 1 cut(s) 1667
Eco130I CCWWGG 5 cut(s) 96, 455, 911, 1011, 1842
Eco147I AGGCCT 1 cut(s) 1586
Eco24I GRGCYC 1 cut(s) 1669
Eco31I GGTCTC 1 cut(s) 428
Eco53kI GAGCTC 1 cut(s) 1667
Eco57I CTGAAG 3 cut(s) 349, 575, 1530
EcoICRI GAGCTC 1 cut(s) 1667
EcoNI CCTNNNNNAGG 1 cut(s) 1641
EcoRI GAATTC 1 cut(s) 785
EcoRII CCWGG 5 cut(s) 695, 1069, 1265, 1474, 1627
EcoT14I CCWWGG 5 cut(s) 96, 455, 911, 1011, 1842
EcoT22I ATGCAT 1 cut(s) 1473
EcoT38I GRGCYC 1 cut(s) 1669
EgeI GGCGCC 1 cut(s) 1001
EheI GGCGCC 1 cut(s) 1001
ErhI CCWWGG 5 cut(s) 96, 455, 911, 1011, 1842
Esp3I CGTCTC 1 cut(s) 278
FalI AAGNNNNNCTT 4 cut(s) 558, 590, 663, 695
FaqI GGGAC 3 cut(s) 606, 667, 1448
FauNDI CATATG 1 cut(s) 1103
FbaI TGATCA 1 cut(s) 1186
FblI GTMKAC 1 cut(s) 1877
Fnu4HI GCNGC 1 cut(s) 93
FokI GGATG 6 cut(s) 497, 643, 928, 1091, 1458, 1688
FriOI GRGCYC 1 cut(s) 1669
Fsp4HI GCNGC 1 cut(s) 93
FspBI CTAG 5 cut(s) 1170, 1317, 1401, 1577, 1698
GlaI GCGC 2 cut(s) 714, 1001
GluI GCNGC 1 cut(s) 93
GsuI CTGGAG 3 cut(s) 683, 1611, 1683
HaeII RGCGCY 1 cut(s) 1003
HaeIII GGCC 9 cut(s) 31, 95, 244, 314, 695, 880, 1016, 1586, 1919
HapII CCGG 3 cut(s) 62, 722, 981
HgaI GACGC 2 cut(s) 98, 260
HhaI GCGC 2 cut(s) 715, 1002
Hin1I GRCGYC 2 cut(s) 271, 1000
Hin6I GCGC 2 cut(s) 713, 1000
HinP1I GCGC 2 cut(s) 713, 1000
HindIII AAGCTT 4 cut(s) 35, 251, 1813, 1824
HpaII CCGG 3 cut(s) 62, 722, 981
Hpy166II GTNNAC 5 cut(s) 116, 616, 1878, 1962, 2032
Hpy188I TCNGA 7 cut(s) 781, 791, 945, 1219, 1327, 1740, 1993
Hpy188III TCNNGA 6 cut(s) 275, 643, 1190, 1317, 1791, 1978
Hpy8I GTNNAC 5 cut(s) 116, 616, 1878, 1962, 2032
Hpy99I CGWCG 1 cut(s) 73
HpyAV CCTTC 5 cut(s) 228, 550, 1163, 1554, 1760
HpyCH4III ACNGT 7 cut(s) 73, 613, 1372, 1430, 1906, 1959, 1986
HpyCH4IV ACGT 2 cut(s) 1705, 1857
HpyCH4V TGCA 7 cut(s) 292, 416, 606, 719, 1471, 1582, 1883
HpyF10VI GCNNNNNNNGC 4 cut(s) 250, 731, 1405, 2057
HpyF3I CTNAG 4 cut(s) 18, 875, 1119, 1326
HpySE526I ACGT 2 cut(s) 1705, 1857
Hsp92I GRCGYC 2 cut(s) 271, 1000
HspAI GCGC 2 cut(s) 713, 1000
KasI GGCGCC 1 cut(s) 999
Ksp22I TGATCA 1 cut(s) 1186
Kzo9I GATC 5 cut(s) 1186, 1214, 1252, 1439, 1838
LguI GCTCTTC 1 cut(s) 72
LmnI GCTCC 5 cut(s) 198, 664, 1664, 1672, 2057
LweI GCATC 1 cut(s) 1480
MaeI CTAG 5 cut(s) 1170, 1317, 1401, 1577, 1698
MaeII ACGT 2 cut(s) 1705, 1857
MaeIII GTNAC 3 cut(s) 518, 1709, 2037
MalI GATC 5 cut(s) 1188, 1216, 1254, 1441, 1840
MboI GATC 5 cut(s) 1186, 1214, 1252, 1439, 1838
MboII GAAGA 9 cut(s) 89, 96, 349, 355, 578, 998, 1262, 1694, 1743
MflI RGATCY 3 cut(s) 1214, 1252, 1838
MhlI GDGCHC 3 cut(s) 669, 1343, 1669
MlsI TGGCCA 3 cut(s) 244, 695, 1016
MluNI TGGCCA 3 cut(s) 244, 695, 1016
Mly113I GGCGCC 1 cut(s) 1000
MlyI GAGTC 5 cut(s) 49, 515, 588, 763, 968
MmeI TCCRAC 1 cut(s) 1242
Mox20I TGGCCA 3 cut(s) 244, 695, 1016
Mph1103I ATGCAT 1 cut(s) 1473
MroXI GAANNNNTTC 1 cut(s) 675
MscI TGGCCA 3 cut(s) 244, 695, 1016
MseI TTAA 6 cut(s) 540, 761, 809, 1290, 1500, 1998
Msp20I TGGCCA 3 cut(s) 244, 695, 1016
MspI CCGG 3 cut(s) 62, 722, 981
MspR9I CCNGG 6 cut(s) 697, 982, 1071, 1267, 1476, 1629
MvaI CCWGG 5 cut(s) 697, 1071, 1267, 1476, 1629
MvnI CGCG 1 cut(s) 92
MwoI GCNNNNNNNGC 4 cut(s) 250, 731, 1405, 2057
NarI GGCGCC 1 cut(s) 1000
NciI CCSGG 1 cut(s) 982
NcoI CCATGG 2 cut(s) 96, 1011
NdeI CATATG 1 cut(s) 1103
NdeII GATC 5 cut(s) 1186, 1214, 1252, 1439, 1838
NlaIV GGNNCC 3 cut(s) 315, 1001, 1840
NmuCI GTSAC 3 cut(s) 518, 1709, 2037
NsiI ATGCAT 1 cut(s) 1473
NspI RCATGY 3 cut(s) 1408, 1463, 2038
PaeI GCATGC 1 cut(s) 1408
PagI TCATGA 1 cut(s) 642
PceI AGGCCT 1 cut(s) 1586
PciI ACATGT 2 cut(s) 1459, 2034
PciSI GCTCTTC 1 cut(s) 72
PcsI WCGNNNNNNNCGW 1 cut(s) 282
PdmI GAANNNNTTC 1 cut(s) 675
PfeI GAWTC 5 cut(s) 703, 1030, 1226, 1613, 1748
PkrI GCNGC 1 cut(s) 94
PleI GAGTC 5 cut(s) 49, 515, 588, 763, 968
PluTI GGCGCC 1 cut(s) 1003
PpsI GAGTC 5 cut(s) 49, 515, 588, 763, 968
PscI ACATGT 2 cut(s) 1459, 2034
PshAI GACNNNNGTC 1 cut(s) 299
Psp124BI GAGCTC 1 cut(s) 1669
Psp1406I AACGTT 1 cut(s) 1857
Psp6I CCWGG 5 cut(s) 695, 1069, 1265, 1474, 1627
PspGI CCWGG 5 cut(s) 695, 1069, 1265, 1474, 1627
PspN4I GGNNCC 3 cut(s) 315, 1001, 1840
PspPI GGNCC 1 cut(s) 313
PstNI CAGNNNCTG 1 cut(s) 795
PsuI RGATCY 3 cut(s) 1214, 1252, 1838
RsaI GTAC 2 cut(s) 1138, 1432
RsaNI GTAC 2 cut(s) 1137, 1431
SacI GAGCTC 1 cut(s) 1669
SapI GCTCTTC 1 cut(s) 72
SaqAI TTAA 6 cut(s) 540, 761, 809, 1290, 1500, 1998
SatI GCNGC 1 cut(s) 93
Sau3AI GATC 5 cut(s) 1186, 1214, 1252, 1439, 1838
Sau96I GGNCC 1 cut(s) 313
ScaI AGTACT 1 cut(s) 1432
SchI GAGTC 5 cut(s) 49, 515, 588, 763, 968
ScrFI CCNGG 6 cut(s) 697, 982, 1071, 1267, 1476, 1629
SduI GDGCHC 3 cut(s) 669, 1343, 1669
SfaNI GCATC 1 cut(s) 1480
SfoI GGCGCC 1 cut(s) 1001
SmlI CTYRAG 4 cut(s) 575, 1108, 1434, 1816
SmoI CTYRAG 4 cut(s) 575, 1108, 1434, 1816
SpeI ACTAGT 1 cut(s) 1576
SphI GCATGC 1 cut(s) 1408
SseBI AGGCCT 1 cut(s) 1586
SsiI CCGC 4 cut(s) 92, 598, 978, 1836
SspDI GGCGCC 1 cut(s) 999
SspMI CTAG 5 cut(s) 1170, 1317, 1401, 1577, 1698
SstI GAGCTC 1 cut(s) 1669
StuI AGGCCT 1 cut(s) 1586
StyD4I CCNGG 6 cut(s) 695, 980, 1069, 1265, 1474, 1627
StyI CCWWGG 5 cut(s) 96, 455, 911, 1011, 1842
TaaI ACNGT 7 cut(s) 73, 613, 1372, 1430, 1906, 1959, 1986
TaiI ACGT 2 cut(s) 1708, 1860
TaqI TCGA 5 cut(s) 75, 276, 303, 706, 922
TatI WGTACW 1 cut(s) 1430
TauI GCSGC 1 cut(s) 95
TfiI GAWTC 5 cut(s) 703, 1030, 1226, 1613, 1748
Tru1I TTAA 6 cut(s) 540, 761, 809, 1290, 1500, 1998
Tru9I TTAA 6 cut(s) 540, 761, 809, 1290, 1500, 1998
TscAI CASTG 2 cut(s) 1377, 1909
TseFI GTSAC 3 cut(s) 518, 1709, 2037
Tsp45I GTSAC 3 cut(s) 518, 1709, 2037
TspGWI ACGGA 1 cut(s) 1195
TspRI CASTG 2 cut(s) 1377, 1909
XagI CCTNNNNNAGG 1 cut(s) 1641
XapI RAATTY 3 cut(s) 638, 785, 1741
XbaI TCTAGA 1 cut(s) 1316
XceI RCATGY 3 cut(s) 1408, 1463, 2038
XmiI GTMKAC 1 cut(s) 1877
XmnI GAANNNNTTC 1 cut(s) 675
XspI CTAG 5 cut(s) 1170, 1317, 1401, 1577, 1698
ZrmI AGTACT 1 cut(s) 1432
Zsp2I ATGCAT 1 cut(s) 1473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.