Plant mobile domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PMD | PF10536 | 90 - 440 | 1.2e-100 | Plant mobile domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 977 |
| Acc36I | ACCTGC | 3 cut(s) | 977, 1176, 1438 |
| AccB1I | GGYRCC | 1 cut(s) | 1005 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 41 |
| AccI | GTMKAC | 3 cut(s) | 760, 942, 1383 |
| AccII | CGCG | 2 cut(s) | 528, 1253 |
| AciI | CCGC | 3 cut(s) | 55, 431, 1956 |
| AclWI | GGATC | 1 cut(s) | 1526 |
| AcsI | RAATTY | 2 cut(s) | 1036, 1429 |
| AcuI | CTGAAG | 1 cut(s) | 768 |
| AcyI | GRCGYC | 1 cut(s) | 1006 |
| AfaI | GTAC | 4 cut(s) | 299, 1615, 1948, 2017 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 41 |
| AflIII | ACRYGT | 1 cut(s) | 2197 |
| AjnI | CCWGG | 4 cut(s) | 629, 1225, 1271, 1492 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 305, 337, 495, 527, 1467, 1499 |
| Alw21I | GWGCWC | 1 cut(s) | 603 |
| Alw26I | GTCTC | 4 cut(s) | 39, 350, 435, 1339 |
| AlwI | GGATC | 1 cut(s) | 1526 |
| AoxI | GGCC | 2 cut(s) | 884, 1333 |
| ApeKI | GCWGC | 9 cut(s) | 1830, 1845, 1881, 1917, 1953, 2139, 2169, 2172, 2175 |
| ApoI | RAATTY | 2 cut(s) | 1036, 1429 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 572, 870 |
| AspLEI | GCGC | 2 cut(s) | 718, 1008 |
| AspS9I | GGNCC | 1 cut(s) | 1487 |
| AsuHPI | GGTGA | 6 cut(s) | 24, 395, 923, 1001, 1484, 1828 |
| AsuNHI | GCTAGC | 2 cut(s) | 1913, 1985 |
| AvaII | GGWCC | 1 cut(s) | 1487 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2007, 2040 |
| BanI | GGYRCC | 1 cut(s) | 1005 |
| BbsI | GAAGAC | 1 cut(s) | 495 |
| Bbv12I | GWGCWC | 1 cut(s) | 603 |
| BbvI | GCAGC | 9 cut(s) | 1842, 1857, 1893, 1929, 1965, 2151, 2181, 2184, 2187 |
| BccI | CCATC | 5 cut(s) | 183, 290, 924, 1363, 2159 |
| BciT130I | CCWGG | 4 cut(s) | 631, 1227, 1273, 1494 |
| BclI | TGATCA | 1 cut(s) | 1201 |
| BcoDI | GTCTC | 4 cut(s) | 39, 350, 435, 1339 |
| BfaI | CTAG | 8 cut(s) | 170, 695, 699, 1605, 1842, 1914, 1950, 1986 |
| BfmI | CTRYAG | 5 cut(s) | 1380, 1455, 1536, 1596, 1665 |
| BfoI | RGCGCY | 1 cut(s) | 1009 |
| BfuAI | ACCTGC | 3 cut(s) | 977, 1176, 1438 |
| BmcAI | AGTACT | 1 cut(s) | 1615 |
| Bme1390I | CCNGG | 4 cut(s) | 631, 1227, 1273, 1494 |
| Bme18I | GGWCC | 1 cut(s) | 1487 |
| BmgT120I | GGNCC | 1 cut(s) | 1487 |
| BmiI | GGNNCC | 2 cut(s) | 1007, 2061 |
| BmrFI | CCNGG | 4 cut(s) | 631, 1227, 1273, 1494 |
| BmsI | GCATC | 5 cut(s) | 788, 1387, 1664, 1830, 1998 |
| BmtI | GCTAGC | 2 cut(s) | 1917, 1989 |
| BpiI | GAAGAC | 1 cut(s) | 495 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 910, 942 |
| BpmI | CTGGAG | 3 cut(s) | 1476, 1548, 1727 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2217 |
| BpuEI | CTTGAG | 2 cut(s) | 518, 1144 |
| BsaAI | YACGTR | 1 cut(s) | 297 |
| BsaHI | GRCGYC | 1 cut(s) | 1006 |
| BsaI | GGTCTC | 2 cut(s) | 39, 350 |
| BsaJI | CCNNGG | 3 cut(s) | 184, 377, 1017 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 69, 99 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 41 |
| Bse118I | RCCGGY | 1 cut(s) | 724 |
| Bse1I | ACTGG | 5 cut(s) | 43, 1037, 1710, 1773, 1980 |
| Bse3DI | GCAATG | 2 cut(s) | 681, 2134 |
| BseBI | CCWGG | 4 cut(s) | 631, 1227, 1273, 1494 |
| BseDI | CCNNGG | 3 cut(s) | 184, 377, 1017 |
| BseGI | GGATG | 4 cut(s) | 194, 412, 570, 1099 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 41 |
| BseMI | GCAATG | 2 cut(s) | 681, 2134 |
| BseMII | CTCAG | 3 cut(s) | 996, 1125, 1272 |
| BseNI | ACTGG | 5 cut(s) | 43, 1037, 1710, 1773, 1980 |
| BseRI | GAGGAG | 1 cut(s) | 982 |
| BseXI | GCAGC | 9 cut(s) | 1842, 1857, 1893, 1929, 1965, 2151, 2181, 2184, 2187 |
| BsgI | GTGCAG | 2 cut(s) | 1104, 1466 |
| Bsh1236I | CGCG | 2 cut(s) | 528, 1253 |
| BshFI | GGCC | 2 cut(s) | 886, 1335 |
| BshNI | GGYRCC | 1 cut(s) | 1005 |
| BsiHKAI | GWGCWC | 1 cut(s) | 603 |
| BsiSI | CCGG | 1 cut(s) | 725 |
| BslFI | GGGAC | 2 cut(s) | 784, 1623 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 41 |
| BsmAI | GTCTC | 4 cut(s) | 39, 350, 435, 1339 |
| BsmFI | GGGAC | 2 cut(s) | 784, 1623 |
| BsmI | GAATGC | 2 cut(s) | 608, 811 |
| BsnI | GGCC | 2 cut(s) | 886, 1335 |
| Bso31I | GGTCTC | 2 cut(s) | 39, 350 |
| Bsp1286I | GDGCHC | 1 cut(s) | 603 |
| Bsp143I | GATC | 5 cut(s) | 1201, 1531, 1549, 1642, 2079 |
| Bsp19I | CCATGG | 2 cut(s) | 377, 1017 |
| Bsp68I | TCGCGA | 1 cut(s) | 528 |
| BspACI | CCGC | 3 cut(s) | 55, 431, 1956 |
| BspANI | GGCC | 2 cut(s) | 886, 1335 |
| BspCNI | CTCAG | 3 cut(s) | 995, 1126, 1273 |
| BspFNI | CGCG | 2 cut(s) | 528, 1253 |
| BspHI | TCATGA | 2 cut(s) | 576, 1782 |
| BspLI | GGNNCC | 2 cut(s) | 1007, 2061 |
| BspMAI | CTGCAG | 2 cut(s) | 1459, 1669 |
| BspMI | ACCTGC | 3 cut(s) | 977, 1176, 1438 |
| BspOI | GCTAGC | 2 cut(s) | 1917, 1989 |
| BspPI | GGATC | 1 cut(s) | 1526 |
| BspT107I | GGYRCC | 1 cut(s) | 1005 |
| BspTNI | GGTCTC | 2 cut(s) | 39, 350 |
| BsrDI | GCAATG | 2 cut(s) | 681, 2134 |
| BsrFI | RCCGGY | 1 cut(s) | 724 |
| BsrI | ACTGG | 5 cut(s) | 43, 1037, 1710, 1773, 1980 |
| BssAI | RCCGGY | 1 cut(s) | 724 |
| BssECI | CCNNGG | 3 cut(s) | 184, 377, 1017 |
| BssMI | GATC | 5 cut(s) | 1201, 1531, 1549, 1642, 2079 |
| BssNI | GRCGYC | 1 cut(s) | 1006 |
| BssT1I | CCWWGG | 3 cut(s) | 184, 377, 1017 |
| Bst2UI | CCWGG | 4 cut(s) | 631, 1227, 1273, 1494 |
| Bst4CI | ACNGT | 5 cut(s) | 131, 837, 947, 1597, 1622 |
| Bst6I | CTCTTC | 5 cut(s) | 3, 498, 575, 1059, 2267 |
| BstACI | GRCGYC | 1 cut(s) | 1006 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1168 |
| BstBAI | YACGTR | 1 cut(s) | 297 |
| BstC8I | GCNNGC | 4 cut(s) | 720, 1087, 1915, 1987 |
| BstDEI | CTNAG | 7 cut(s) | 240, 881, 982, 1134, 1281, 2031, 2217 |
| BstDSI | CCRYGG | 2 cut(s) | 377, 1017 |
| BstF5I | GGATG | 4 cut(s) | 194, 412, 570, 1099 |
| BstFNI | CGCG | 2 cut(s) | 528, 1253 |
| BstH2I | RGCGCY | 1 cut(s) | 1009 |
| BstHHI | GCGC | 2 cut(s) | 718, 1008 |
| BstKTI | GATC | 5 cut(s) | 1204, 1534, 1552, 1645, 2082 |
| BstMAI | GTCTC | 4 cut(s) | 39, 350, 435, 1339 |
| BstMBI | GATC | 5 cut(s) | 1201, 1531, 1549, 1642, 2079 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 806, 1168, 1827, 2175 |
| BstNI | CCWGG | 4 cut(s) | 631, 1227, 1273, 1494 |
| BstNSI | RCATGY | 1 cut(s) | 1888 |
| BstSCI | CCNGG | 4 cut(s) | 629, 1225, 1271, 1492 |
| BstSFI | CTRYAG | 5 cut(s) | 1380, 1455, 1536, 1596, 1665 |
| BstUI | CGCG | 2 cut(s) | 528, 1253 |
| BstV1I | GCAGC | 9 cut(s) | 1842, 1857, 1893, 1929, 1965, 2151, 2181, 2184, 2187 |
| BstV2I | GAAGAC | 1 cut(s) | 495 |
| BstX2I | RGATCY | 1 cut(s) | 1531 |
| BstYI | RGATCY | 1 cut(s) | 1531 |
| BsuRI | GGCC | 2 cut(s) | 886, 1335 |
| BtgI | CCRYGG | 2 cut(s) | 377, 1017 |
| BtsCI | GGATG | 4 cut(s) | 194, 412, 570, 1099 |
| BtsIMutI | CAGTG | 2 cut(s) | 127, 1627 |
| BtuMI | TCGCGA | 1 cut(s) | 528 |
| BveI | ACCTGC | 3 cut(s) | 977, 1176, 1438 |
| Cac8I | GCNNGC | 4 cut(s) | 720, 1087, 1915, 1987 |
| CciI | TCATGA | 2 cut(s) | 576, 1782 |
| CfoI | GCGC | 2 cut(s) | 718, 1008 |
| Cfr10I | RCCGGY | 1 cut(s) | 724 |
| Cfr13I | GGNCC | 1 cut(s) | 1487 |
| Csp6I | GTAC | 4 cut(s) | 298, 1614, 1947, 2016 |
| CviQI | GTAC | 4 cut(s) | 298, 1614, 1947, 2016 |
| DdeI | CTNAG | 7 cut(s) | 240, 881, 982, 1134, 1281, 2031, 2217 |
| DinI | GGCGCC | 1 cut(s) | 1007 |
| DpnI | GATC | 5 cut(s) | 1203, 1533, 1551, 1644, 2081 |
| DpnII | GATC | 5 cut(s) | 1201, 1531, 1549, 1642, 2079 |
| Eam1104I | CTCTTC | 5 cut(s) | 3, 498, 575, 1059, 2267 |
| EarI | CTCTTC | 5 cut(s) | 3, 498, 575, 1059, 2267 |
| Eco130I | CCWWGG | 3 cut(s) | 184, 377, 1017 |
| Eco147I | AGGCCT | 1 cut(s) | 1335 |
| Eco31I | GGTCTC | 2 cut(s) | 39, 350 |
| Eco47I | GGWCC | 1 cut(s) | 1487 |
| Eco57I | CTGAAG | 1 cut(s) | 768 |
| EcoRI | GAATTC | 1 cut(s) | 1429 |
| EcoRII | CCWGG | 4 cut(s) | 629, 1225, 1271, 1492 |
| EcoT14I | CCWWGG | 3 cut(s) | 184, 377, 1017 |
| EgeI | GGCGCC | 1 cut(s) | 1007 |
| EheI | GGCGCC | 1 cut(s) | 1007 |
| ErhI | CCWWGG | 3 cut(s) | 184, 377, 1017 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 480, 512, 597, 629 |
| FaqI | GGGAC | 2 cut(s) | 784, 1623 |
| FauNDI | CATATG | 2 cut(s) | 1350, 2188 |
| FbaI | TGATCA | 1 cut(s) | 1201 |
| FblI | GTMKAC | 3 cut(s) | 760, 942, 1383 |
| FokI | GGATG | 4 cut(s) | 201, 419, 577, 1106 |
| FspBI | CTAG | 8 cut(s) | 170, 695, 699, 1605, 1842, 1914, 1950, 1986 |
| GlaI | GCGC | 2 cut(s) | 717, 1007 |
| GsuI | CTGGAG | 3 cut(s) | 1476, 1548, 1727 |
| HaeII | RGCGCY | 1 cut(s) | 1009 |
| HaeIII | GGCC | 2 cut(s) | 886, 1335 |
| HapII | CCGG | 1 cut(s) | 725 |
| HhaI | GCGC | 2 cut(s) | 718, 1008 |
| Hin1I | GRCGYC | 1 cut(s) | 1006 |
| Hin6I | GCGC | 2 cut(s) | 716, 1006 |
| HinP1I | GCGC | 2 cut(s) | 716, 1006 |
| HindIII | AAGCTT | 2 cut(s) | 1586, 2073 |
| HinfI | GANTC | 4 cut(s) | 443, 706, 980, 1322 |
| HpaII | CCGG | 1 cut(s) | 725 |
| HphI | GGTGA | 6 cut(s) | 24, 395, 923, 1001, 1484, 1828 |
| Hpy166II | GTNNAC | 4 cut(s) | 761, 943, 1384, 2224 |
| Hpy188III | TCNNGA | 6 cut(s) | 527, 577, 875, 1205, 1640, 1783 |
| Hpy8I | GTNNAC | 4 cut(s) | 761, 943, 1384, 2224 |
| Hpy99I | CGWCG | 1 cut(s) | 1829 |
| HpyAV | CCTTC | 7 cut(s) | 376, 986, 1220, 1312, 1455, 2006, 2007 |
| HpyCH4III | ACNGT | 5 cut(s) | 131, 837, 947, 1597, 1622 |
| HpyCH4IV | ACGT | 2 cut(s) | 296, 2197 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 806, 1168, 1827, 2175 |
| HpyF3I | CTNAG | 7 cut(s) | 240, 881, 982, 1134, 1281, 2031, 2217 |
| HpySE526I | ACGT | 2 cut(s) | 296, 2197 |
| Hsp92I | GRCGYC | 1 cut(s) | 1006 |
| HspAI | GCGC | 2 cut(s) | 716, 1006 |
| KasI | GGCGCC | 1 cut(s) | 1005 |
| Ksp22I | TGATCA | 1 cut(s) | 1201 |
| Kzo9I | GATC | 5 cut(s) | 1201, 1531, 1549, 1642, 2079 |
| LmnI | GCTCC | 2 cut(s) | 588, 2147 |
| Lsp1109I | GCAGC | 9 cut(s) | 1842, 1857, 1893, 1929, 1965, 2151, 2181, 2184, 2187 |
| LweI | GCATC | 5 cut(s) | 788, 1387, 1664, 1830, 1998 |
| MaeI | CTAG | 8 cut(s) | 170, 695, 699, 1605, 1842, 1914, 1950, 1986 |
| MaeII | ACGT | 2 cut(s) | 296, 2197 |
| MaeIII | GTNAC | 2 cut(s) | 814, 831 |
| MalI | GATC | 5 cut(s) | 1203, 1533, 1551, 1644, 2081 |
| MboI | GATC | 5 cut(s) | 1201, 1531, 1549, 1642, 2079 |
| MfeI | CAATTG | 2 cut(s) | 774, 2001 |
| MflI | RGATCY | 1 cut(s) | 1531 |
| MhlI | GDGCHC | 1 cut(s) | 603 |
| Mly113I | GGCGCC | 1 cut(s) | 1006 |
| MlyI | GAGTC | 2 cut(s) | 437, 974 |
| MmeI | TCCRAC | 2 cut(s) | 937, 1123 |
| MroXI | GAANNNNTTC | 2 cut(s) | 572, 870 |
| MseI | TTAA | 9 cut(s) | 452, 794, 1026, 1307, 1371, 1590, 2025, 2070, 2211 |
| MspA1I | CMGCKG | 1 cut(s) | 1956 |
| MspI | CCGG | 1 cut(s) | 725 |
| MspR9I | CCNGG | 4 cut(s) | 631, 1227, 1273, 1494 |
| MunI | CAATTG | 2 cut(s) | 774, 2001 |
| Mva1269I | GAATGC | 2 cut(s) | 608, 811 |
| MvaI | CCWGG | 4 cut(s) | 631, 1227, 1273, 1494 |
| MvnI | CGCG | 2 cut(s) | 528, 1253 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 806, 1168, 1827, 2175 |
| NarI | GGCGCC | 1 cut(s) | 1006 |
| NcoI | CCATGG | 2 cut(s) | 377, 1017 |
| NdeI | CATATG | 2 cut(s) | 1350, 2188 |
| NdeII | GATC | 5 cut(s) | 1201, 1531, 1549, 1642, 2079 |
| NheI | GCTAGC | 2 cut(s) | 1913, 1985 |
| NlaIV | GGNNCC | 2 cut(s) | 1007, 2061 |
| NmeAIII | GCCGAG | 2 cut(s) | 942, 1165 |
| NmuCI | GTSAC | 1 cut(s) | 831 |
| NruI | TCGCGA | 1 cut(s) | 528 |
| NspI | RCATGY | 1 cut(s) | 1888 |
| PagI | TCATGA | 2 cut(s) | 576, 1782 |
| PaqCI | CACCTGC | 1 cut(s) | 977 |
| PceI | AGGCCT | 1 cut(s) | 1335 |
| PctI | GAATGC | 2 cut(s) | 608, 811 |
| PdmI | GAANNNNTTC | 2 cut(s) | 572, 870 |
| PfeI | GAWTC | 2 cut(s) | 706, 1322 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 41 |
| PfoI | TCCNGGA | 2 cut(s) | 1225, 1492 |
| PleI | GAGTC | 2 cut(s) | 437, 974 |
| PluTI | GGCGCC | 1 cut(s) | 1009 |
| PpsI | GAGTC | 2 cut(s) | 437, 974 |
| Ppu21I | YACGTR | 1 cut(s) | 297 |
| Psp6I | CCWGG | 4 cut(s) | 629, 1225, 1271, 1492 |
| PspGI | CCWGG | 4 cut(s) | 629, 1225, 1271, 1492 |
| PspN4I | GGNNCC | 2 cut(s) | 1007, 2061 |
| PspPI | GGNCC | 1 cut(s) | 1487 |
| PstI | CTGCAG | 2 cut(s) | 1459, 1669 |
| PsuI | RGATCY | 1 cut(s) | 1531 |
| RruI | TCGCGA | 1 cut(s) | 528 |
| RsaI | GTAC | 4 cut(s) | 299, 1615, 1948, 2017 |
| RsaNI | GTAC | 4 cut(s) | 298, 1614, 1947, 2016 |
| SaqAI | TTAA | 9 cut(s) | 452, 794, 1026, 1307, 1371, 1590, 2025, 2070, 2211 |
| Sau3AI | GATC | 5 cut(s) | 1201, 1531, 1549, 1642, 2079 |
| Sau96I | GGNCC | 1 cut(s) | 1487 |
| ScaI | AGTACT | 1 cut(s) | 1615 |
| SchI | GAGTC | 2 cut(s) | 437, 974 |
| ScrFI | CCNGG | 4 cut(s) | 631, 1227, 1273, 1494 |
| SduI | GDGCHC | 1 cut(s) | 603 |
| SfaNI | GCATC | 5 cut(s) | 788, 1387, 1664, 1830, 1998 |
| SfcI | CTRYAG | 5 cut(s) | 1380, 1455, 1536, 1596, 1665 |
| SfoI | GGCGCC | 1 cut(s) | 1007 |
| SinI | GGWCC | 1 cut(s) | 1487 |
| SmlI | CTYRAG | 2 cut(s) | 497, 1123 |
| SmoI | CTYRAG | 2 cut(s) | 497, 1123 |
| SseBI | AGGCCT | 1 cut(s) | 1335 |
| SsiI | CCGC | 3 cut(s) | 55, 431, 1956 |
| SspDI | GGCGCC | 1 cut(s) | 1005 |
| SspI | AATATT | 2 cut(s) | 1478, 1687 |
| SspMI | CTAG | 8 cut(s) | 170, 695, 699, 1605, 1842, 1914, 1950, 1986 |
| StuI | AGGCCT | 1 cut(s) | 1335 |
| StyD4I | CCNGG | 4 cut(s) | 629, 1225, 1271, 1492 |
| StyI | CCWWGG | 3 cut(s) | 184, 377, 1017 |
| TaaI | ACNGT | 5 cut(s) | 131, 837, 947, 1597, 1622 |
| TaiI | ACGT | 2 cut(s) | 299, 2200 |
| TaqI | TCGA | 4 cut(s) | 198, 709, 928, 1338 |
| TatI | WGTACW | 2 cut(s) | 1613, 1946 |
| TauI | GCSGC | 1 cut(s) | 1959 |
| TfiI | GAWTC | 2 cut(s) | 706, 1322 |
| Tru1I | TTAA | 9 cut(s) | 452, 794, 1026, 1307, 1371, 1590, 2025, 2070, 2211 |
| Tru9I | TTAA | 9 cut(s) | 452, 794, 1026, 1307, 1371, 1590, 2025, 2070, 2211 |
| TscAI | CASTG | 2 cut(s) | 134, 1627 |
| TseFI | GTSAC | 1 cut(s) | 831 |
| TseI | GCWGC | 9 cut(s) | 1830, 1845, 1881, 1917, 1953, 2139, 2169, 2172, 2175 |
| Tsp45I | GTSAC | 1 cut(s) | 831 |
| TspGWI | ACGGA | 1 cut(s) | 1203 |
| TspRI | CASTG | 2 cut(s) | 134, 1627 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 41 |
| VpaK11BI | GGWCC | 1 cut(s) | 1487 |
| XapI | RAATTY | 2 cut(s) | 1036, 1429 |
| XceI | RCATGY | 1 cut(s) | 1888 |
| XmiI | GTMKAC | 3 cut(s) | 760, 942, 1383 |
| XmnI | GAANNNNTTC | 2 cut(s) | 572, 870 |
| XspI | CTAG | 8 cut(s) | 170, 695, 699, 1605, 1842, 1914, 1950, 1986 |
| ZrmI | AGTACT | 1 cut(s) | 1615 |