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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1221 |
| AarI | CACCTGC | 1 cut(s) | 1207 |
| Acc16I | TGCGCA | 1 cut(s) | 1246 |
| Acc36I | ACCTGC | 3 cut(s) | 1207, 1921, 2183 |
| Acc65I | GGTACC | 1 cut(s) | 1625 |
| AccB1I | GGYRCC | 1 cut(s) | 1625 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 509 |
| AccI | GTMKAC | 1 cut(s) | 1018 |
| AccII | CGCG | 1 cut(s) | 1015 |
| AccIII | TCCGGA | 1 cut(s) | 1117 |
| AciI | CCGC | 2 cut(s) | 306, 1646 |
| AclI | AACGTT | 1 cut(s) | 409 |
| AclWI | GGATC | 5 cut(s) | 352, 1698, 1887, 1900, 1919 |
| AcoI | YGGCCR | 1 cut(s) | 638 |
| AcsI | RAATTY | 6 cut(s) | 400, 1046, 1749, 1873, 2124, 2317 |
| AcvI | CACGTG | 1 cut(s) | 2171 |
| AcyI | GRCGYC | 1 cut(s) | 1480 |
| AfaI | GTAC | 6 cut(s) | 1132, 1523, 1627, 1640, 1717, 2018 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 509, 1902, 1903 |
| AflII | CTTAAG | 1 cut(s) | 392 |
| AflIII | ACRYGT | 2 cut(s) | 2168, 2457 |
| AhlI | ACTAGT | 1 cut(s) | 349 |
| AjnI | CCWGG | 6 cut(s) | 13, 170, 658, 1727, 1927, 2050 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 14, 46 |
| Alw21I | GWGCWC | 2 cut(s) | 957, 1077 |
| Alw26I | GTCTC | 4 cut(s) | 290, 507, 830, 1847 |
| AlwI | GGATC | 5 cut(s) | 352, 1698, 1887, 1900, 1919 |
| Aor13HI | TCCGGA | 1 cut(s) | 1117 |
| AoxI | GGCC | 5 cut(s) | 303, 356, 638, 2490, 2625 |
| ApeKI | GCWGC | 3 cut(s) | 1387, 2580, 2583 |
| ApoI | RAATTY | 6 cut(s) | 400, 1046, 1749, 1873, 2124, 2317 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1046 |
| Asp718I | GGTACC | 1 cut(s) | 1625 |
| AspA2I | CCTAGG | 1 cut(s) | 1901 |
| AspLEI | GCGC | 1 cut(s) | 1247 |
| AspS9I | GGNCC | 5 cut(s) | 11, 2273, 2291, 2625, 2676 |
| AsuHPI | GGTGA | 8 cut(s) | 70, 492, 875, 907, 1299, 2351, 2369, 2458 |
| AsuNHI | GCTAGC | 1 cut(s) | 2576 |
| AvaII | GGWCC | 4 cut(s) | 11, 2273, 2291, 2676 |
| AvrII | CCTAGG | 1 cut(s) | 1901 |
| BaeGI | GKGCMC | 1 cut(s) | 460 |
| BalI | TGGCCA | 1 cut(s) | 640 |
| BamHI | GGATCC | 1 cut(s) | 1892 |
| BanI | GGYRCC | 1 cut(s) | 1625 |
| BanII | GRGCYC | 1 cut(s) | 957 |
| BbrPI | CACGTG | 1 cut(s) | 2171 |
| BbsI | GAAGAC | 2 cut(s) | 746, 2109 |
| Bbv12I | GWGCWC | 2 cut(s) | 957, 1077 |
| BbvI | GCAGC | 3 cut(s) | 1399, 2592, 2595 |
| BciT130I | CCWGG | 6 cut(s) | 15, 172, 660, 1729, 1929, 2052 |
| BciVI | GTATCC | 1 cut(s) | 178 |
| BclI | TGATCA | 3 cut(s) | 130, 706, 1374 |
| BcoDI | GTCTC | 4 cut(s) | 290, 507, 830, 1847 |
| BcuI | ACTAGT | 1 cut(s) | 349 |
| BfmI | CTRYAG | 3 cut(s) | 1530, 1920, 1950 |
| BfrI | CTTAAG | 1 cut(s) | 392 |
| BfuAI | ACCTGC | 3 cut(s) | 1207, 1921, 2183 |
| BfuI | GTATCC | 1 cut(s) | 178 |
| BglII | AGATCT | 1 cut(s) | 2389 |
| BisI | GCNGC | 4 cut(s) | 306, 1388, 2581, 2584 |
| BlnI | CCTAGG | 1 cut(s) | 1901 |
| BlsI | GCNGC | 4 cut(s) | 307, 1389, 2582, 2585 |
| BmcAI | AGTACT | 3 cut(s) | 1523, 1717, 2018 |
| Bme1390I | CCNGG | 6 cut(s) | 15, 172, 660, 1729, 1929, 2052 |
| Bme18I | GGWCC | 4 cut(s) | 11, 2273, 2291, 2676 |
| BmgT120I | GGNCC | 5 cut(s) | 11, 2273, 2291, 2625, 2676 |
| BmiI | GGNNCC | 4 cut(s) | 1180, 1627, 1894, 2501 |
| BmrFI | CCNGG | 6 cut(s) | 15, 172, 660, 1729, 1929, 2052 |
| BmrI | ACTGGG | 1 cut(s) | 365 |
| BmsI | GCATC | 5 cut(s) | 1111, 1273, 1308, 1583, 2405 |
| BmtI | GCTAGC | 1 cut(s) | 2580 |
| BmuI | ACTGGG | 1 cut(s) | 365 |
| BpiI | GAAGAC | 2 cut(s) | 746, 2109 |
| BpmI | CTGGAG | 1 cut(s) | 2106 |
| BpuEI | CTTGAG | 5 cut(s) | 73, 941, 1459, 1618, 2657 |
| BsaAI | YACGTR | 2 cut(s) | 735, 2171 |
| BsaHI | GRCGYC | 1 cut(s) | 1480 |
| BsaI | GGTCTC | 3 cut(s) | 290, 507, 1847 |
| BsaJI | CCNNGG | 4 cut(s) | 658, 857, 1901, 2672 |
| BsaWI | WCCGGW | 1 cut(s) | 1117 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2079, 2109 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 509, 1902, 1903 |
| Bse1I | ACTGG | 4 cut(s) | 371, 511, 548, 1511 |
| Bse3DI | GCAATG | 1 cut(s) | 1665 |
| BseAI | TCCGGA | 1 cut(s) | 1117 |
| BseBI | CCWGG | 6 cut(s) | 15, 172, 660, 1729, 1929, 2052 |
| BseDI | CCNNGG | 4 cut(s) | 658, 857, 1901, 2672 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 509, 1902, 1903 |
| BseMI | GCAATG | 1 cut(s) | 1665 |
| BseMII | CTCAG | 7 cut(s) | 186, 222, 825, 1309, 1346, 2034, 2448 |
| BseNI | ACTGG | 4 cut(s) | 371, 511, 548, 1511 |
| BseRI | GAGGAG | 1 cut(s) | 2533 |
| BseSI | GKGCMC | 1 cut(s) | 460 |
| BseXI | GCAGC | 3 cut(s) | 1399, 2592, 2595 |
| BsgI | GTGCAG | 1 cut(s) | 1406 |
| Bsh1236I | CGCG | 1 cut(s) | 1015 |
| BshFI | GGCC | 5 cut(s) | 305, 358, 640, 2492, 2627 |
| BshNI | GGYRCC | 1 cut(s) | 1625 |
| BsiHKAI | GWGCWC | 2 cut(s) | 957, 1077 |
| BsiSI | CCGG | 2 cut(s) | 1118, 1461 |
| BslFI | GGGAC | 2 cut(s) | 1075, 1421 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 509, 1902, 1903 |
| BsmAI | GTCTC | 4 cut(s) | 290, 507, 830, 1847 |
| BsmFI | GGGAC | 2 cut(s) | 1075, 1421 |
| BsmI | GAATGC | 3 cut(s) | 1082, 1579, 1762 |
| BsnI | GGCC | 5 cut(s) | 305, 358, 640, 2492, 2627 |
| Bso31I | GGTCTC | 3 cut(s) | 290, 507, 1847 |
| Bsp1286I | GDGCHC | 3 cut(s) | 460, 957, 1077 |
| Bsp13I | TCCGGA | 1 cut(s) | 1117 |
| Bsp143I | GATC | 9 cut(s) | 130, 344, 706, 1374, 1675, 1703, 1892, 1924, 2389 |
| BspACI | CCGC | 2 cut(s) | 306, 1646 |
| BspANI | GGCC | 5 cut(s) | 305, 358, 640, 2492, 2627 |
| BspCNI | CTCAG | 7 cut(s) | 187, 223, 826, 1308, 1347, 2033, 2447 |
| BspEI | TCCGGA | 1 cut(s) | 1117 |
| BspFNI | CGCG | 1 cut(s) | 1015 |
| BspHI | TCATGA | 1 cut(s) | 1050 |
| BspLI | GGNNCC | 4 cut(s) | 1180, 1627, 1894, 2501 |
| BspMI | ACCTGC | 3 cut(s) | 1207, 1921, 2183 |
| BspOI | GCTAGC | 1 cut(s) | 2580 |
| BspPI | GGATC | 5 cut(s) | 352, 1698, 1887, 1900, 1919 |
| BspQI | GCTCTTC | 1 cut(s) | 480 |
| BspT107I | GGYRCC | 1 cut(s) | 1625 |
| BspTI | CTTAAG | 1 cut(s) | 392 |
| BspTNI | GGTCTC | 3 cut(s) | 290, 507, 1847 |
| BsrDI | GCAATG | 1 cut(s) | 1665 |
| BsrI | ACTGG | 4 cut(s) | 371, 511, 548, 1511 |
| BssECI | CCNNGG | 4 cut(s) | 658, 857, 1901, 2672 |
| BssMI | GATC | 9 cut(s) | 130, 344, 706, 1374, 1675, 1703, 1892, 1924, 2389 |
| BssNI | GRCGYC | 1 cut(s) | 1480 |
| BssT1I | CCWWGG | 3 cut(s) | 857, 1901, 2672 |
| Bst2UI | CCWGG | 6 cut(s) | 15, 172, 660, 1729, 1929, 2052 |
| Bst4CI | ACNGT | 5 cut(s) | 185, 1058, 2363, 2428, 2512 |
| Bst6I | CTCTTC | 3 cut(s) | 419, 480, 1998 |
| BstACI | GRCGYC | 1 cut(s) | 1480 |
| BstAFI | CTTAAG | 1 cut(s) | 392 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1088 |
| BstBAI | YACGTR | 2 cut(s) | 735, 2171 |
| BstC8I | GCNNGC | 5 cut(s) | 748, 2554, 2578, 2629, 2633 |
| BstFNI | CGCG | 1 cut(s) | 1015 |
| BstHHI | GCGC | 1 cut(s) | 1247 |
| BstKTI | GATC | 9 cut(s) | 133, 347, 709, 1377, 1678, 1706, 1895, 1927, 2392 |
| BstMAI | GTCTC | 4 cut(s) | 290, 507, 830, 1847 |
| BstMBI | GATC | 9 cut(s) | 130, 344, 706, 1374, 1675, 1703, 1892, 1924, 2389 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1088, 1208, 1913 |
| BstNI | CCWGG | 6 cut(s) | 15, 172, 660, 1729, 1929, 2052 |
| BstNSI | RCATGY | 4 cut(s) | 1148, 1547, 2461, 2656 |
| BstSCI | CCNGG | 6 cut(s) | 13, 170, 658, 1727, 1927, 2050 |
| BstSFI | CTRYAG | 3 cut(s) | 1530, 1920, 1950 |
| BstSLI | GKGCMC | 1 cut(s) | 460 |
| BstUI | CGCG | 1 cut(s) | 1015 |
| BstV1I | GCAGC | 3 cut(s) | 1399, 2592, 2595 |
| BstV2I | GAAGAC | 2 cut(s) | 746, 2109 |
| BstX2I | RGATCY | 3 cut(s) | 1892, 1924, 2389 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 636 |
| BstYI | RGATCY | 3 cut(s) | 1892, 1924, 2389 |
| BsuI | GTATCC | 1 cut(s) | 178 |
| BsuRI | GGCC | 5 cut(s) | 305, 358, 640, 2492, 2627 |
| BtsIMutI | CAGTG | 8 cut(s) | 190, 282, 1063, 1839, 2100, 2368, 2424, 2616 |
| BveI | ACCTGC | 3 cut(s) | 1207, 1921, 2183 |
| Cac8I | GCNNGC | 5 cut(s) | 748, 2554, 2578, 2629, 2633 |
| CciI | TCATGA | 1 cut(s) | 1050 |
| CfoI | GCGC | 1 cut(s) | 1247 |
| Cfr13I | GGNCC | 5 cut(s) | 11, 2273, 2291, 2625, 2676 |
| CseI | GACGC | 2 cut(s) | 999, 1469 |
| Csp6I | GTAC | 6 cut(s) | 1131, 1522, 1626, 1639, 1716, 2017 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 716, 751, 1399, 1434 |
| CviQI | GTAC | 6 cut(s) | 1131, 1522, 1626, 1639, 1716, 2017 |
| DpnI | GATC | 9 cut(s) | 132, 346, 708, 1376, 1677, 1705, 1894, 1926, 2391 |
| DpnII | GATC | 9 cut(s) | 130, 344, 706, 1374, 1675, 1703, 1892, 1924, 2389 |
| EaeI | YGGCCR | 1 cut(s) | 638 |
| Eam1104I | CTCTTC | 3 cut(s) | 419, 480, 1998 |
| EarI | CTCTTC | 3 cut(s) | 419, 480, 1998 |
| Ecl136II | GAGCTC | 1 cut(s) | 955 |
| Eco130I | CCWWGG | 3 cut(s) | 857, 1901, 2672 |
| Eco147I | AGGCCT | 1 cut(s) | 358 |
| Eco24I | GRGCYC | 1 cut(s) | 957 |
| Eco31I | GGTCTC | 3 cut(s) | 290, 507, 1847 |
| Eco32I | GATATC | 1 cut(s) | 655 |
| Eco47I | GGWCC | 4 cut(s) | 11, 2273, 2291, 2676 |
| Eco53kI | GAGCTC | 1 cut(s) | 955 |
| Eco72I | CACGTG | 1 cut(s) | 2171 |
| EcoICRI | GAGCTC | 1 cut(s) | 955 |
| EcoRII | CCWGG | 6 cut(s) | 13, 170, 658, 1727, 1927, 2050 |
| EcoRV | GATATC | 1 cut(s) | 655 |
| EcoT14I | CCWWGG | 3 cut(s) | 857, 1901, 2672 |
| EcoT22I | ATGCAT | 3 cut(s) | 1545, 1694, 1886 |
| EcoT38I | GRGCYC | 1 cut(s) | 957 |
| ErhI | CCWWGG | 3 cut(s) | 857, 1901, 2672 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 474, 506, 960, 992, 1071, 1103 |
| FaqI | GGGAC | 2 cut(s) | 1075, 1421 |
| FbaI | TGATCA | 3 cut(s) | 130, 706, 1374 |
| FblI | GTMKAC | 1 cut(s) | 1018 |
| Fnu4HI | GCNGC | 4 cut(s) | 306, 1388, 2581, 2584 |
| FriOI | GRGCYC | 1 cut(s) | 957 |
| Fsp4HI | GCNGC | 4 cut(s) | 306, 1388, 2581, 2584 |
| FspI | TGCGCA | 1 cut(s) | 1246 |
| GlaI | GCGC | 1 cut(s) | 1246 |
| GluI | GCNGC | 4 cut(s) | 306, 1388, 2581, 2584 |
| GsuI | CTGGAG | 1 cut(s) | 2106 |
| HaeIII | GGCC | 5 cut(s) | 305, 358, 640, 2492, 2627 |
| HapII | CCGG | 2 cut(s) | 1118, 1461 |
| HgaI | GACGC | 2 cut(s) | 999, 1469 |
| HhaI | GCGC | 1 cut(s) | 1247 |
| Hin1I | GRCGYC | 1 cut(s) | 1480 |
| Hin6I | GCGC | 1 cut(s) | 1245 |
| HinP1I | GCGC | 1 cut(s) | 1245 |
| HincII | GTYRAC | 1 cut(s) | 2422 |
| HindII | GTYRAC | 1 cut(s) | 2422 |
| HpaII | CCGG | 2 cut(s) | 1118, 1461 |
| HphI | GGTGA | 8 cut(s) | 70, 492, 875, 907, 1299, 2351, 2369, 2458 |
| Hpy166II | GTNNAC | 5 cut(s) | 724, 1019, 1854, 2422, 2431 |
| Hpy188III | TCNNGA | 9 cut(s) | 52, 134, 380, 941, 983, 1051, 1118, 1679, 2387 |
| Hpy8I | GTNNAC | 5 cut(s) | 724, 1019, 1854, 2422, 2431 |
| Hpy99I | CGWCG | 1 cut(s) | 1015 |
| HpyCH4III | ACNGT | 5 cut(s) | 185, 1058, 2363, 2428, 2512 |
| HpyCH4IV | ACGT | 3 cut(s) | 409, 734, 2170 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1088, 1208, 1913 |
| HpySE526I | ACGT | 3 cut(s) | 409, 734, 2170 |
| Hsp92I | GRCGYC | 1 cut(s) | 1480 |
| HspAI | GCGC | 1 cut(s) | 1245 |
| Kpn2I | TCCGGA | 1 cut(s) | 1117 |
| KpnI | GGTACC | 1 cut(s) | 1629 |
| Ksp22I | TGATCA | 3 cut(s) | 130, 706, 1374 |
| Kzo9I | GATC | 9 cut(s) | 130, 344, 706, 1374, 1675, 1703, 1892, 1924, 2389 |
| LguI | GCTCTTC | 1 cut(s) | 480 |
| LmnI | GCTCC | 2 cut(s) | 1072, 2225 |
| Lsp1109I | GCAGC | 3 cut(s) | 1399, 2592, 2595 |
| LweI | GCATC | 5 cut(s) | 1111, 1273, 1308, 1583, 2405 |
| MaeII | ACGT | 3 cut(s) | 409, 734, 2170 |
| MaeIII | GTNAC | 5 cut(s) | 58, 185, 1305, 2357, 2446 |
| MalI | GATC | 9 cut(s) | 132, 346, 708, 1376, 1677, 1705, 1894, 1926, 2391 |
| MboI | GATC | 9 cut(s) | 130, 344, 706, 1374, 1675, 1703, 1892, 1924, 2389 |
| MfeI | CAATTG | 5 cut(s) | 710, 1155, 1248, 2220, 2403 |
| MflI | RGATCY | 3 cut(s) | 1892, 1924, 2389 |
| MhlI | GDGCHC | 3 cut(s) | 460, 957, 1077 |
| MlsI | TGGCCA | 1 cut(s) | 640 |
| MluNI | TGGCCA | 1 cut(s) | 640 |
| MlyI | GAGTC | 3 cut(s) | 932, 1366, 1448 |
| MmeI | TCCRAC | 2 cut(s) | 52, 2241 |
| Mox20I | TGGCCA | 1 cut(s) | 640 |
| Mph1103I | ATGCAT | 3 cut(s) | 1545, 1694, 1886 |
| MroI | TCCGGA | 1 cut(s) | 1117 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1046 |
| MscI | TGGCCA | 1 cut(s) | 640 |
| MseI | TTAA | 8 cut(s) | 393, 582, 672, 978, 1268, 1743, 2331, 2616 |
| MslI | CAYNNNNRTG | 1 cut(s) | 183 |
| Msp20I | TGGCCA | 1 cut(s) | 640 |
| MspA1I | CMGCKG | 1 cut(s) | 746 |
| MspCI | CTTAAG | 1 cut(s) | 392 |
| MspI | CCGG | 2 cut(s) | 1118, 1461 |
| MspR9I | CCNGG | 6 cut(s) | 15, 172, 660, 1729, 1929, 2052 |
| MunI | CAATTG | 5 cut(s) | 710, 1155, 1248, 2220, 2403 |
| Mva1269I | GAATGC | 3 cut(s) | 1082, 1579, 1762 |
| MvaI | CCWGG | 6 cut(s) | 15, 172, 660, 1729, 1929, 2052 |
| MvnI | CGCG | 1 cut(s) | 1015 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1088, 1208, 1913 |
| NdeII | GATC | 9 cut(s) | 130, 344, 706, 1374, 1675, 1703, 1892, 1924, 2389 |
| NheI | GCTAGC | 1 cut(s) | 2576 |
| NlaIV | GGNNCC | 4 cut(s) | 1180, 1627, 1894, 2501 |
| NmuCI | GTSAC | 5 cut(s) | 58, 185, 1305, 2357, 2446 |
| NsbI | TGCGCA | 1 cut(s) | 1246 |
| NsiI | ATGCAT | 3 cut(s) | 1545, 1694, 1886 |
| NspI | RCATGY | 4 cut(s) | 1148, 1547, 2461, 2656 |
| PagI | TCATGA | 1 cut(s) | 1050 |
| PaqCI | CACCTGC | 1 cut(s) | 1207 |
| PceI | AGGCCT | 1 cut(s) | 358 |
| PciI | ACATGT | 1 cut(s) | 2457 |
| PciSI | GCTCTTC | 1 cut(s) | 480 |
| PctI | GAATGC | 3 cut(s) | 1082, 1579, 1762 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1046 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 509 |
| PfoI | TCCNGGA | 1 cut(s) | 170 |
| PkrI | GCNGC | 4 cut(s) | 307, 1389, 2582, 2585 |
| PleI | GAGTC | 3 cut(s) | 931, 1365, 1448 |
| PmaCI | CACGTG | 1 cut(s) | 2171 |
| PmlI | CACGTG | 1 cut(s) | 2171 |
| PpsI | GAGTC | 3 cut(s) | 931, 1365, 1448 |
| Ppu21I | YACGTR | 2 cut(s) | 735, 2171 |
| PscI | ACATGT | 1 cut(s) | 2457 |
| PsiI | TTATAA | 1 cut(s) | 1221 |
| Psp124BI | GAGCTC | 1 cut(s) | 957 |
| Psp1406I | AACGTT | 1 cut(s) | 409 |
| Psp6I | CCWGG | 6 cut(s) | 13, 170, 658, 1727, 1927, 2050 |
| PspCI | CACGTG | 1 cut(s) | 2171 |
| PspGI | CCWGG | 6 cut(s) | 13, 170, 658, 1727, 1927, 2050 |
| PspN4I | GGNNCC | 4 cut(s) | 1180, 1627, 1894, 2501 |
| PspPI | GGNCC | 5 cut(s) | 11, 2273, 2291, 2625, 2676 |
| PsuI | RGATCY | 3 cut(s) | 1892, 1924, 2389 |
| PvuII | CAGCTG | 1 cut(s) | 746 |
| RsaI | GTAC | 6 cut(s) | 1132, 1523, 1627, 1640, 1717, 2018 |
| RsaNI | GTAC | 6 cut(s) | 1131, 1522, 1626, 1639, 1716, 2017 |
| RseI | CAYNNNNRTG | 1 cut(s) | 183 |
| SacI | GAGCTC | 1 cut(s) | 957 |
| SapI | GCTCTTC | 1 cut(s) | 480 |
| SaqAI | TTAA | 8 cut(s) | 393, 582, 672, 978, 1268, 1743, 2331, 2616 |
| SatI | GCNGC | 4 cut(s) | 306, 1388, 2581, 2584 |
| Sau3AI | GATC | 9 cut(s) | 130, 344, 706, 1374, 1675, 1703, 1892, 1924, 2389 |
| Sau96I | GGNCC | 5 cut(s) | 11, 2273, 2291, 2625, 2676 |
| ScaI | AGTACT | 3 cut(s) | 1523, 1717, 2018 |
| SchI | GAGTC | 3 cut(s) | 932, 1366, 1448 |
| ScrFI | CCNGG | 6 cut(s) | 15, 172, 660, 1729, 1929, 2052 |
| SduI | GDGCHC | 3 cut(s) | 460, 957, 1077 |
| SfaNI | GCATC | 5 cut(s) | 1111, 1273, 1308, 1583, 2405 |
| SfcI | CTRYAG | 3 cut(s) | 1530, 1920, 1950 |
| SinI | GGWCC | 4 cut(s) | 11, 2273, 2291, 2676 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 183 |
| SmlI | CTYRAG | 6 cut(s) | 52, 392, 956, 1438, 1597, 2636 |
| SmoI | CTYRAG | 6 cut(s) | 52, 392, 956, 1438, 1597, 2636 |
| SpeI | ACTAGT | 1 cut(s) | 349 |
| SseBI | AGGCCT | 1 cut(s) | 358 |
| SsiI | CCGC | 2 cut(s) | 306, 1646 |
| SspI | AATATT | 1 cut(s) | 2135 |
| SstI | GAGCTC | 1 cut(s) | 957 |
| StuI | AGGCCT | 1 cut(s) | 358 |
| StyD4I | CCNGG | 6 cut(s) | 13, 170, 658, 1727, 1927, 2050 |
| StyI | CCWWGG | 3 cut(s) | 857, 1901, 2672 |
| TaaI | ACNGT | 5 cut(s) | 185, 1058, 2363, 2428, 2512 |
| TaiI | ACGT | 3 cut(s) | 412, 737, 2173 |
| TaqI | TCGA | 6 cut(s) | 106, 773, 926, 1402, 1674, 1702 |
| TatI | WGTACW | 4 cut(s) | 1130, 1521, 1715, 2016 |
| TauI | GCSGC | 1 cut(s) | 308 |
| Tru1I | TTAA | 8 cut(s) | 393, 582, 672, 978, 1268, 1743, 2331, 2616 |
| Tru9I | TTAA | 8 cut(s) | 393, 582, 672, 978, 1268, 1743, 2331, 2616 |
| TscAI | CASTG | 8 cut(s) | 190, 282, 1063, 1839, 2100, 2368, 2431, 2616 |
| TseFI | GTSAC | 5 cut(s) | 58, 185, 1305, 2357, 2446 |
| TseI | GCWGC | 3 cut(s) | 1387, 2580, 2583 |
| Tsp45I | GTSAC | 5 cut(s) | 58, 185, 1305, 2357, 2446 |
| TspGWI | ACGGA | 2 cut(s) | 1984, 2121 |
| TspRI | CASTG | 8 cut(s) | 190, 282, 1063, 1839, 2100, 2368, 2431, 2616 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 509 |
| Vha464I | CTTAAG | 1 cut(s) | 392 |
| VpaK11BI | GGWCC | 4 cut(s) | 11, 2273, 2291, 2676 |
| XapI | RAATTY | 6 cut(s) | 400, 1046, 1749, 1873, 2124, 2317 |
| XceI | RCATGY | 4 cut(s) | 1148, 1547, 2461, 2656 |
| XmaJI | CCTAGG | 1 cut(s) | 1901 |
| XmiI | GTMKAC | 1 cut(s) | 1018 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1046 |
| ZrmI | AGTACT | 3 cut(s) | 1523, 1717, 2018 |
| Zsp2I | ATGCAT | 3 cut(s) | 1545, 1694, 1886 |