Rmu_sc0005722.1_g000005

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005722.1
OG0000264
Physical Location & Seq
Forward (+)
22580 .. 24616
2037 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005722.1_g000005.1.cds

Sequence Viewer

Length: 2037 bp
atgattgaagcacaagaaaatgaggccatggtttcaccaactggaggagacccatttcggaaaagagcctactttctcaaacccattgttgcttcctccattgatgaacctcctcctgagctttcccagtgttttagctccctcccatcaggttttgagcccaagaaattggttcttgaaatccgtggatggcgtctggaccacaaagatttgacgacttgggtggagcacttggctttaactcaccaaggtacatggaggagagctggaatctatgatgccatcttcaattccatgtgcgaaatccgaaggaagaatgatttggttcgtgggcttggcgagaaatggtgctgtgacaccaacacgttcatttttgattggggtgaagcaactatttctttggaagatgtgatggtgttgggagggttttctgttttgggagactctgttttcagtcctcttgaaagcagagaactaagagaagtggaggatagacttgaggaagcgcggaagggatttcaaaataaaagaggtgatcaaggctggggagttgcctacactgatttgtggatgaaggaattcatgaaaggtgggagtgatttggagcatgaggcatttcttgtgttctggttgtctaggtatgtttttcatgatgctcgtaactcagtgaacaaggctgtgttttccattgcaattcgtttagctagagggactctgattgcgcttgcgcctgctgttcttgcaaacatttatagagatttgggtatgttgaagaggagtattgcagcttcgaatgagttgaaagtgacgatcaagtcgccattccatttggttcaggtttgggcttgggagagatttctggaacttcggccaaggccaaatggtatcagaaatgctgagccgagattggctcgatgggataaagtacttggtctaaatattgttggaaacttgaggagagttttggattcggcgggagaaggtttcttgtggcgcccttatgccattgccattgagaactggaaacttcccaagtattttgtggagaaggagaagtgggtagtggttggtcccagtttgaatgatgatgaactgctgtcattttcgatatgcctgagggtgaatgagttggttggatttggtactaaacagcagtaccttccgcaccgagtggctatgcaatttggttacgatcaggacatcccaggttttgttgctccattgattcagaatactaatatgacctggaagcagtacttgaaagaacttgagtatgtgatattgtatataccatcgaggctttctgagggggatgctagcacaagatatttaaagtggtggaaggaatccatgacaggcctcaaacacagaagtatgtcaccagaaaagaaagcaagggaagctgtcaatgagatatatgatgtcagcattccttgtatccgttctccaaagaaggcagaagtactcgtgcaggtttctgcaggaaggaatgtatacgaaggtaatgattcccttgtgcctcccggattccctccaaaaaggtataggctggaagttggagatcctatggatgatgatgacctaactatatcagaggctttgaaaattaggaagaagcataaaactgttgaaactagaaaaggtagtgacggtgagaagttatcagctgatcatgatcaaatcttggcatcttcaattgcagatgaatattctgttaatactatcacatcagaaatatttgagaatgacattacattgggtaaagttgtgacttggggtgataagggtaagaggaagctgagaaaggtaagcatcattattggcaatgaatgtcctagtagcacctctccagttgaggaacaggaatgtgctagcctcagctcttcatttgagagatcggaatacgcttgcagcaggtctgtatttgagaaaccagaatatgctagcagcagttcatttgaaaaacgggtgtcacaacttaaatctaaggttacaatgcttgaaaagatagttgaggtgttaaaatctaggacatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

678

Amino Acids

77.19

Weight (kDa)

7.55

Isoelectric Point (pI)

43.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000264)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48145 AT1G50745
fragaria_vesca FvH4_3g22280 FvH4_3g22281 FvH4_3g22290 FvH4_3g22300 FvH4_3g22321 FvH4_3g22330 FvH4_3g22330 FvH4_3g22331
rosa_chinensis RchiOBHm_Chr5g0038351 RchiOBHm_Chr5g0038361 RchiOBHm_Chr5g0038371 RchiOBHm_Chr5g0038381 RchiOBHm_Chr5g0038421 RchiOBHm_Chr5g0038451 RchiOBHm_Chr5g0038471 RchiOBHm_Chr5g0038491 RchiOBHm_Chr5g0038561 RchiOBHm_Chr5g0038731 RchiOBHm_Chr5g0038741 RchiOBHm_Chr5g0038771 RchiOBHm_Chr5g0038781 RchiOBHm_Chr5g0038791 RchiOBHm_Chr5g0038801 RchiOBHm_Chr5g0038831
rosa_laevigata RLG00000008815 RLG00000020213 RLG00000033850 RLG00000033864 RLG00000033875
rosa_multiflora Rmu_co8006804.1_g000001 Rmu_co8168012.1_g000001 Rmu_co8236409.1_g000001 Rmu_co8247247.1_g000001 Rmu_co8440391.1_g000001 Rmu_sc0000533.1_g000088 Rmu_sc0003198.1_g000005 Rmu_sc0003198.1_g000006 Rmu_sc0003198.1_g000007 Rmu_sc0003198.1_g000008 Rmu_sc0003198.1_g000013 Rmu_sc0005722.1_g000005 Rmu_sc0005722.1_g000007 Rmu_sc0005722.1_g000012 Rmu_sc0005722.1_g000013 Rmu_sc0005836.1_g000001 Rmu_sc0009149.1_g000006 Rmu_sc0009149.1_g000018 Rmu_sc0009149.1_g000020 Rmu_sc0017397.1_g000004 Rmu_sc0025071.1_g000001 Rmu_sc0032545.1_g000001 Rmu_sc0038346.1_g000001
rosa_roxburghii Rroxscaffold_1G00042150 Rroxscaffold_1G00042180 Rroxscaffold_1G00042230 Rroxscaffold_1G00042240 Rroxscaffold_1G00042260 Rroxscaffold_1G00042320 Rroxscaffold_1G00042330 Rroxscaffold_1G00042350 Rroxscaffold_1G00042360 Rroxscaffold_1G00042370 Rroxscaffold_1G00042400 Rroxscaffold_1G00042430 Rroxscaffold_1G00042440 Rroxscaffold_1G00042510 Rroxscaffold_1G00042580 Rroxscaffold_1G00042620
rosa_rugosa Rorug05G0172200 Rorug05G0172300 Rorug05G0172500 Rorug05G0173100 Rorug05G0173200.1 Rorug05G0173600 Rorug05G0173800 Rorug05G0174000 Rorug05G0174100 Rorug05G0174200 Rorug05G0174200 Rorug05G0174400 Rorug05G0174500 Rorug05G0174600 Rorug05G0174700 Rorug05G0174800
rosa_samantha Rh5AG259600 Rh5AG260200 Rh5AG260600 Rh5AG260800 Rh5AG261300 Rh5AG261400 Rh5AG261500 Rh5AG261700 Rh5AG261900 Rh5BG263600 Rh5BG264200 Rh5BG264500 Rh5BG264800 Rh5BG265100 Rh5BG265200 Rh5BG265500 Rh5BG265600 Rh5BG266000 Rh5CG295900 Rh5CG296700 Rh5CG296800 Rh5CG296900 Rh5CG297200 Rh5CG297700 Rh5CG297900 Rh5CG298100 Rh5CG298200 Rh5CG298300 Rh5CG298400 Rh5CG298500 Rh5CG298900 Rh5CG299200 Rh6DG125700
rosa_wichuraiana Rw0G001950 Rw0G001960 Rw0G013290 Rw5G024020 Rw5G024310 Rw5G024340 Rw5G024350 Rw5G024370 Rw5G024380 Rw5G024390 Rw5G024400 Rw5G024420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 814
Acc36I ACCTGC 2 cut(s) 1462, 1905
AccB1I GGYRCC 1 cut(s) 993
AccI GTMKAC 1 cut(s) 1494
AccII CGCG 1 cut(s) 508
AciI CCGC 3 cut(s) 508, 974, 1163
AclWI GGATC 1 cut(s) 1556
AcoI YGGCCR 1 cut(s) 869
AcsI RAATTY 1 cut(s) 578
AcyI GRCGYC 2 cut(s) 193, 994
AdeI CACNNNGTG 1 cut(s) 1171
AfaI GTAC 6 cut(s) 253, 927, 1144, 1157, 1256, 1464
AfiI CCNNNNNNNGG 1 cut(s) 44
AflIII ACRYGT 1 cut(s) 363
AjnI CCWGG 2 cut(s) 1204, 1244
AjuI GAANNNNNNNTTGG 2 cut(s) 305, 337
AluBI AGCT 9 cut(s) 121, 138, 266, 704, 788, 1403, 1667, 1798, 1881
AluI AGCT 9 cut(s) 121, 138, 266, 704, 788, 1403, 1667, 1798, 1881
Alw21I GWGCWC 1 cut(s) 231
Alw26I GTCTC 2 cut(s) 42, 435
AlwI GGATC 1 cut(s) 1556
AoxI GGCC 4 cut(s) 24, 869, 875, 1357
ApeKI GCWGC 3 cut(s) 785, 1911, 1947
ApoI RAATTY 1 cut(s) 578
Asp700I GAANNNNTTC 1 cut(s) 578
AspLEI GCGC 4 cut(s) 508, 724, 730, 996
AspS9I GGNCC 2 cut(s) 199, 1070
AsuC2I CCSGG 1 cut(s) 1524
AsuHPI GGTGA 8 cut(s) 27, 236, 395, 545, 1132, 1371, 1664, 1790
AsuII TTCGAA 1 cut(s) 791
AsuNHI GCTAGC 3 cut(s) 1316, 1871, 1943
AvaII GGWCC 2 cut(s) 199, 1070
AxyI CCTNAGG 1 cut(s) 1115
BaeI ACNNNNGTAYC 2 cut(s) 1139, 1172
BanI GGYRCC 1 cut(s) 993
BanII GRGCYC 1 cut(s) 162
BarI GAAGNNNNNNTAC 2 cut(s) 772, 804
BauI CACGAG 1 cut(s) 1466
Bbv12I GWGCWC 1 cut(s) 231
BbvCI CCTCAGC 1 cut(s) 1877
BbvI GCAGC 3 cut(s) 797, 1923, 1959
BccI CCATC 6 cut(s) 154, 183, 290, 406, 909, 1300
BciT130I CCWGG 2 cut(s) 1206, 1246
BciVI GTATCC 1 cut(s) 1448
BclI TGATCA 3 cut(s) 535, 1669, 1675
BcnI CCSGG 1 cut(s) 1524
BcoDI GTCTC 2 cut(s) 42, 435
BfaI CTAG 8 cut(s) 636, 705, 1317, 1635, 1836, 1872, 1944, 2028
BfmI CTRYAG 1 cut(s) 1479
BfoI RGCGCY 1 cut(s) 997
BfuAI ACCTGC 2 cut(s) 1462, 1905
BfuI GTATCC 1 cut(s) 1448
BisI GCNGC 3 cut(s) 786, 1912, 1948
BlpI GCTNAGC 1 cut(s) 897
BlsI GCNGC 3 cut(s) 787, 1913, 1949
BmcAI AGTACT 3 cut(s) 927, 1256, 1464
Bme1390I CCNGG 3 cut(s) 1206, 1246, 1524
Bme18I GGWCC 2 cut(s) 199, 1070
BmgT120I GGNCC 2 cut(s) 199, 1070
BmiI GGNNCC 2 cut(s) 995, 1072
BmrFI CCNGG 3 cut(s) 1206, 1246, 1524
BmrI ACTGGG 2 cut(s) 121, 1068
BmsI GCATC 5 cut(s) 268, 643, 1303, 1697, 1821
BmtI GCTAGC 3 cut(s) 1320, 1875, 1947
BmuI ACTGGG 2 cut(s) 121, 1068
BplI GAGNNNNNCTC 2 cut(s) 895, 927
BpmI CTGGAG 2 cut(s) 63, 1833
Bpu10I CCTNAGC 2 cut(s) 117, 1877
Bpu1102I GCTNAGC 1 cut(s) 897
Bpu14I TTCGAA 1 cut(s) 791
BpuEI CTTGAG 3 cut(s) 518, 973, 1289
BpuMI CCSGG 1 cut(s) 1524
BsaBI GATNNNNATC 1 cut(s) 1674
BsaHI GRCGYC 2 cut(s) 193, 994
BsaI GGTCTC 1 cut(s) 42
BsaJI CCNNGG 5 cut(s) 27, 184, 247, 872, 1204
BsaXI ACNNNNNCTCC 2 cut(s) 432, 462
Bsc4I CCNNNNNNNGG 1 cut(s) 44
Bse1I ACTGG 5 cut(s) 46, 127, 1025, 1074, 1850
Bse21I CCTNAGG 1 cut(s) 1115
Bse3DI GCAATG 3 cut(s) 687, 1005, 1831
Bse8I GATNNNNATC 1 cut(s) 1674
BseBI CCWGG 2 cut(s) 1206, 1246
BseDI CCNNGG 5 cut(s) 27, 184, 247, 872, 1204
BseGI GGATG 5 cut(s) 194, 576, 1200, 1318, 1576
BseJI GATNNNNATC 1 cut(s) 1674
BseLI CCNNNNNNNGG 1 cut(s) 44
BseMI GCAATG 3 cut(s) 687, 1005, 1831
BseMII CTCAG 7 cut(s) 108, 678, 888, 1106, 1296, 1790, 1891
BseNI ACTGG 5 cut(s) 46, 127, 1025, 1074, 1850
BseRI GAGGAG 5 cut(s) 60, 102, 274, 790, 970
BseXI GCAGC 3 cut(s) 797, 1923, 1959
BseYI CCCAGC 1 cut(s) 543
BsgI GTGCAG 1 cut(s) 1490
Bsh1236I CGCG 1 cut(s) 508
BshFI GGCC 4 cut(s) 26, 871, 877, 1359
BshNI GGYRCC 1 cut(s) 993
BsiHKAI GWGCWC 1 cut(s) 231
BsiSI CCGG 1 cut(s) 1524
BslFI GGGAC 2 cut(s) 724, 1056
BslI CCNNNNNNNGG 1 cut(s) 44
BsmAI GTCTC 2 cut(s) 42, 435
BsmFI GGGAC 2 cut(s) 724, 1056
BsmI GAATGC 1 cut(s) 1428
BsnI GGCC 4 cut(s) 26, 871, 877, 1359
Bso31I GGTCTC 1 cut(s) 42
Bsp119I TTCGAA 1 cut(s) 791
Bsp1286I GDGCHC 2 cut(s) 162, 231
Bsp143I GATC 7 cut(s) 535, 810, 1192, 1561, 1669, 1675, 1895
Bsp1720I GCTNAGC 1 cut(s) 897
Bsp19I CCATGG 1 cut(s) 27
BspACI CCGC 3 cut(s) 508, 974, 1163
BspANI GGCC 4 cut(s) 26, 871, 877, 1359
BspCNI CTCAG 7 cut(s) 109, 677, 889, 1107, 1297, 1791, 1890
BspFNI CGCG 1 cut(s) 508
BspHI TCATGA 3 cut(s) 582, 649, 1672
BspLI GGNNCC 2 cut(s) 995, 1072
BspMAI CTGCAG 1 cut(s) 1483
BspMI ACCTGC 2 cut(s) 1462, 1905
BspOI GCTAGC 3 cut(s) 1320, 1875, 1947
BspPI GGATC 1 cut(s) 1556
BspQI GCTCTTC 1 cut(s) 1888
BspT104I TTCGAA 1 cut(s) 791
BspT107I GGYRCC 1 cut(s) 993
BspTNI GGTCTC 1 cut(s) 42
BsrDI GCAATG 3 cut(s) 687, 1005, 1831
BsrI ACTGG 5 cut(s) 46, 127, 1025, 1074, 1850
BssECI CCNNGG 5 cut(s) 27, 184, 247, 872, 1204
BssMI GATC 7 cut(s) 535, 810, 1192, 1561, 1669, 1675, 1895
BssNAI GTATAC 1 cut(s) 1495
BssNI GRCGYC 2 cut(s) 193, 994
BssSI CACGAG 1 cut(s) 1466
BssT1I CCWWGG 3 cut(s) 27, 247, 872
Bst1107I GTATAC 1 cut(s) 1495
Bst2BI CACGAG 1 cut(s) 1466
Bst2UI CCWGG 2 cut(s) 1206, 1246
Bst4CI ACNGT 2 cut(s) 1627, 1652
Bst6I CTCTTC 2 cut(s) 767, 1888
BstACI GRCGYC 2 cut(s) 193, 994
BstBI TTCGAA 1 cut(s) 791
BstC8I GCNNGC 6 cut(s) 726, 732, 1318, 1873, 1909, 1945
BstDEI CTNAG 9 cut(s) 117, 476, 664, 897, 1115, 1305, 1799, 1877, 1986
BstDSI CCRYGG 2 cut(s) 27, 184
BstF5I GGATG 5 cut(s) 194, 576, 1200, 1318, 1576
BstFNI CGCG 1 cut(s) 508
BstH2I RGCGCY 1 cut(s) 997
BstHHI GCGC 4 cut(s) 508, 724, 730, 996
BstKTI GATC 7 cut(s) 538, 813, 1195, 1564, 1672, 1678, 1898
BstMAI GTCTC 2 cut(s) 42, 435
BstMBI GATC 7 cut(s) 535, 810, 1192, 1561, 1669, 1675, 1895
BstMWI GCNNNNNNNGC 2 cut(s) 740, 1400
BstNI CCWGG 2 cut(s) 1206, 1246
BstSCI CCNGG 3 cut(s) 1204, 1244, 1522
BstSFI CTRYAG 1 cut(s) 1479
BstUI CGCG 1 cut(s) 508
BstV1I GCAGC 3 cut(s) 797, 1923, 1959
BstX2I RGATCY 1 cut(s) 1561
BstXI CCANNNNNNTGG 1 cut(s) 169
BstYI RGATCY 1 cut(s) 1561
BstZ17I GTATAC 1 cut(s) 1495
Bsu36I CCTNAGG 1 cut(s) 1115
BsuI GTATCC 1 cut(s) 1448
BsuRI GGCC 4 cut(s) 26, 871, 877, 1359
BtgI CCRYGG 2 cut(s) 27, 184
BtsCI GGATG 5 cut(s) 194, 576, 1200, 1318, 1576
BtsIMutI CAGTG 3 cut(s) 134, 558, 672
BveI ACCTGC 2 cut(s) 1462, 1905
Cac8I GCNNGC 6 cut(s) 726, 732, 1318, 1873, 1909, 1945
CciI TCATGA 3 cut(s) 582, 649, 1672
CfoI GCGC 4 cut(s) 508, 724, 730, 996
Cfr13I GGNCC 2 cut(s) 199, 1070
CseI GACGC 1 cut(s) 182
Csp6I GTAC 6 cut(s) 252, 926, 1143, 1156, 1255, 1463
CviAII CATG 8 cut(s) 28, 255, 295, 583, 608, 650, 1351, 1673
CviQI GTAC 6 cut(s) 252, 926, 1143, 1156, 1255, 1463
DdeI CTNAG 9 cut(s) 117, 476, 664, 897, 1115, 1305, 1799, 1877, 1986
DinI GGCGCC 1 cut(s) 995
DpnI GATC 7 cut(s) 537, 812, 1194, 1563, 1671, 1677, 1897
DpnII GATC 7 cut(s) 535, 810, 1192, 1561, 1669, 1675, 1895
DraI TTTAAA 1 cut(s) 1332
DraIII CACNNNGTG 1 cut(s) 1171
DrdI GACNNNNNNGTC 1 cut(s) 814
DseDI GACNNNNNNGTC 1 cut(s) 814
EaeI YGGCCR 1 cut(s) 869
Eam1104I CTCTTC 2 cut(s) 767, 1888
EarI CTCTTC 2 cut(s) 767, 1888
Eco130I CCWWGG 3 cut(s) 27, 247, 872
Eco147I AGGCCT 1 cut(s) 1359
Eco24I GRGCYC 1 cut(s) 162
Eco31I GGTCTC 1 cut(s) 42
Eco47I GGWCC 2 cut(s) 199, 1070
Eco81I CCTNAGG 1 cut(s) 1115
EcoRI GAATTC 1 cut(s) 578
EcoRII CCWGG 2 cut(s) 1204, 1244
EcoT14I CCWWGG 3 cut(s) 27, 247, 872
EcoT38I GRGCYC 1 cut(s) 162
EgeI GGCGCC 1 cut(s) 995
EheI GGCGCC 1 cut(s) 995
ErhI CCWWGG 3 cut(s) 27, 247, 872
FaeI CATG 8 cut(s) 31, 258, 298, 586, 611, 653, 1354, 1676
FalI AAGNNNNNCTT 2 cut(s) 1241, 1273
FaqI GGGAC 2 cut(s) 724, 1056
FatI CATG 8 cut(s) 27, 254, 294, 582, 607, 649, 1350, 1672
FauI CCCGC 1 cut(s) 967
FbaI TGATCA 3 cut(s) 535, 1669, 1675
FblI GTMKAC 1 cut(s) 1494
Fnu4HI GCNGC 3 cut(s) 786, 1912, 1948
FokI GGATG 5 cut(s) 201, 583, 1187, 1325, 1583
FriOI GRGCYC 1 cut(s) 162
Fsp4HI GCNGC 3 cut(s) 786, 1912, 1948
FspBI CTAG 8 cut(s) 636, 705, 1317, 1635, 1836, 1872, 1944, 2028
GlaI GCGC 4 cut(s) 507, 723, 729, 995
GluI GCNGC 3 cut(s) 786, 1912, 1948
GsaI CCCAGC 1 cut(s) 547
GsuI CTGGAG 2 cut(s) 63, 1833
HaeII RGCGCY 1 cut(s) 997
HaeIII GGCC 4 cut(s) 26, 871, 877, 1359
HapII CCGG 1 cut(s) 1524
HgaI GACGC 1 cut(s) 182
HhaI GCGC 4 cut(s) 508, 724, 730, 996
Hin1I GRCGYC 2 cut(s) 193, 994
Hin1II CATG 8 cut(s) 31, 258, 298, 586, 611, 653, 1354, 1676
Hin6I GCGC 4 cut(s) 506, 722, 728, 994
HinP1I GCGC 4 cut(s) 506, 722, 728, 994
HinfI GANTC 8 cut(s) 270, 443, 712, 968, 1225, 1346, 1508, 1527
HpaII CCGG 1 cut(s) 1524
HphI GGTGA 8 cut(s) 27, 236, 395, 545, 1132, 1371, 1664, 1790
Hpy166II GTNNAC 2 cut(s) 670, 1495
Hpy188I TCNGA 9 cut(s) 60, 308, 717, 890, 1230, 1306, 1594, 1732, 1900
Hpy188III TCNNGA 9 cut(s) 116, 176, 197, 461, 583, 650, 860, 1196, 1673
Hpy8I GTNNAC 2 cut(s) 670, 1495
HpyCH4III ACNGT 2 cut(s) 1627, 1652
HpyCH4IV ACGT 1 cut(s) 365
HpyCH4V TGCA 8 cut(s) 692, 743, 785, 1180, 1471, 1481, 1700, 1911
HpyF10VI GCNNNNNNNGC 2 cut(s) 740, 1400
HpyF3I CTNAG 9 cut(s) 117, 476, 664, 897, 1115, 1305, 1799, 1877, 1986
HpySE526I ACGT 1 cut(s) 365
Hsp92I GRCGYC 2 cut(s) 193, 994
Hsp92II CATG 8 cut(s) 31, 258, 298, 586, 611, 653, 1354, 1676
HspAI GCGC 4 cut(s) 506, 722, 728, 994
KasI GGCGCC 1 cut(s) 993
Ksp22I TGATCA 3 cut(s) 535, 1669, 1675
Kzo9I GATC 7 cut(s) 535, 810, 1192, 1561, 1669, 1675, 1895
LguI GCTCTTC 1 cut(s) 1888
LmnI GCTCC 4 cut(s) 143, 226, 604, 1222
Lsp1109I GCAGC 3 cut(s) 797, 1923, 1959
LweI GCATC 5 cut(s) 268, 643, 1303, 1697, 1821
MaeI CTAG 8 cut(s) 636, 705, 1317, 1635, 1836, 1872, 1944, 2028
MaeII ACGT 1 cut(s) 365
MaeIII GTNAC 9 cut(s) 353, 659, 805, 1187, 1377, 1646, 1768, 1971, 1990
MalI GATC 7 cut(s) 537, 812, 1194, 1563, 1671, 1677, 1897
MboI GATC 7 cut(s) 535, 810, 1192, 1561, 1669, 1675, 1895
MboII GAAGA 7 cut(s) 277, 325, 416, 784, 1624, 1683, 1875
MfeI CAATTG 1 cut(s) 1695
MflI RGATCY 1 cut(s) 1561
MhlI GDGCHC 2 cut(s) 162, 231
MluCI AATT 7 cut(s) 167, 289, 578, 693, 1181, 1605, 1695
Mly113I GGCGCC 1 cut(s) 994
MlyI GAGTC 2 cut(s) 437, 706
MmeI TCCRAC 3 cut(s) 925, 1114, 1537
MroXI GAANNNNTTC 1 cut(s) 578
MseI TTAA 5 cut(s) 239, 1331, 1716, 1980, 2021
MspA1I CMGCKG 1 cut(s) 1667
MspI CCGG 1 cut(s) 1524
MspR9I CCNGG 3 cut(s) 1206, 1246, 1524
MunI CAATTG 1 cut(s) 1695
Mva1269I GAATGC 1 cut(s) 1428
MvaI CCWGG 2 cut(s) 1206, 1246
MvnI CGCG 1 cut(s) 508
MwoI GCNNNNNNNGC 2 cut(s) 740, 1400
NarI GGCGCC 1 cut(s) 994
NciI CCSGG 1 cut(s) 1524
NcoI CCATGG 1 cut(s) 27
NdeII GATC 7 cut(s) 535, 810, 1192, 1561, 1669, 1675, 1895
NheI GCTAGC 3 cut(s) 1316, 1871, 1943
NlaIII CATG 8 cut(s) 31, 258, 298, 586, 611, 653, 1354, 1676
NlaIV GGNNCC 2 cut(s) 995, 1072
NmeAIII GCCGAG 1 cut(s) 927
NmuCI GTSAC 6 cut(s) 353, 805, 1377, 1646, 1768, 1971
NspV TTCGAA 1 cut(s) 791
PagI TCATGA 3 cut(s) 582, 649, 1672
PceI AGGCCT 1 cut(s) 1359
PciSI GCTCTTC 1 cut(s) 1888
PctI GAATGC 1 cut(s) 1428
PdmI GAANNNNTTC 1 cut(s) 578
PfeI GAWTC 6 cut(s) 270, 968, 1225, 1346, 1508, 1527
PfoI TCCNGGA 1 cut(s) 1522
PkrI GCNGC 3 cut(s) 787, 1913, 1949
PleI GAGTC 2 cut(s) 437, 706
PluTI GGCGCC 1 cut(s) 997
PpsI GAGTC 2 cut(s) 437, 706
Psp6I CCWGG 2 cut(s) 1204, 1244
PspFI CCCAGC 1 cut(s) 543
PspGI CCWGG 2 cut(s) 1204, 1244
PspN4I GGNNCC 2 cut(s) 995, 1072
PspPI GGNCC 2 cut(s) 199, 1070
PstI CTGCAG 1 cut(s) 1483
PsuI RGATCY 1 cut(s) 1561
PvuII CAGCTG 1 cut(s) 1667
RsaI GTAC 6 cut(s) 253, 927, 1144, 1157, 1256, 1464
RsaNI GTAC 6 cut(s) 252, 926, 1143, 1156, 1255, 1463
SapI GCTCTTC 1 cut(s) 1888
SaqAI TTAA 5 cut(s) 239, 1331, 1716, 1980, 2021
SatI GCNGC 3 cut(s) 786, 1912, 1948
Sau3AI GATC 7 cut(s) 535, 810, 1192, 1561, 1669, 1675, 1895
Sau96I GGNCC 2 cut(s) 199, 1070
ScaI AGTACT 3 cut(s) 927, 1256, 1464
SchI GAGTC 2 cut(s) 437, 706
ScrFI CCNGG 3 cut(s) 1206, 1246, 1524
SduI GDGCHC 2 cut(s) 162, 231
SfaNI GCATC 5 cut(s) 268, 643, 1303, 1697, 1821
SfcI CTRYAG 1 cut(s) 1479
SfoI GGCGCC 1 cut(s) 995
SfuI TTCGAA 1 cut(s) 791
SinI GGWCC 2 cut(s) 199, 1070
SmlI CTYRAG 3 cut(s) 497, 952, 1268
SmoI CTYRAG 3 cut(s) 497, 952, 1268
Sse9I AATT 7 cut(s) 167, 289, 578, 693, 1181, 1605, 1695
SseBI AGGCCT 1 cut(s) 1359
SsiI CCGC 3 cut(s) 508, 974, 1163
SspDI GGCGCC 1 cut(s) 993
SspI AATATT 3 cut(s) 940, 1709, 1737
SspMI CTAG 8 cut(s) 636, 705, 1317, 1635, 1836, 1872, 1944, 2028
StuI AGGCCT 1 cut(s) 1359
StyD4I CCNGG 3 cut(s) 1204, 1244, 1522
StyI CCWWGG 3 cut(s) 27, 247, 872
TaaI ACNGT 2 cut(s) 1627, 1652
TaiI ACGT 1 cut(s) 368
TaqI TCGA 4 cut(s) 791, 913, 1106, 1295
TasI AATT 7 cut(s) 167, 289, 578, 693, 1181, 1605, 1695
TatI WGTACW 3 cut(s) 925, 1254, 1462
TfiI GAWTC 6 cut(s) 270, 968, 1225, 1346, 1508, 1527
Tru1I TTAA 5 cut(s) 239, 1331, 1716, 1980, 2021
Tru9I TTAA 5 cut(s) 239, 1331, 1716, 1980, 2021
TscAI CASTG 3 cut(s) 134, 565, 672
TseFI GTSAC 6 cut(s) 353, 805, 1377, 1646, 1768, 1971
TseI GCWGC 3 cut(s) 785, 1911, 1947
Tsp45I GTSAC 6 cut(s) 353, 805, 1377, 1646, 1768, 1971
TspGWI ACGGA 2 cut(s) 173, 1430
TspRI CASTG 3 cut(s) 134, 565, 672
VpaK11BI GGWCC 2 cut(s) 199, 1070
XapI RAATTY 1 cut(s) 578
XcmI CCANNNNNNNNNTGG 1 cut(s) 1039
XmiI GTMKAC 1 cut(s) 1494
XmnI GAANNNNTTC 1 cut(s) 578
XspI CTAG 8 cut(s) 636, 705, 1317, 1635, 1836, 1872, 1944, 2028
ZrmI AGTACT 3 cut(s) 927, 1256, 1464
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.