Rh5BG263600

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0000264
Physical Location & Seq
Forward (+)
32998770 .. 33001846
3077 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG263600.1

Sequence Viewer

Length: 2280 bp
ATGATTGAAGAGAGAGAAATGGTCATGGTTTCACCAACTGGTGGAGACCCATTTTGCAAAAATGGCTATTTTCGCAAACCCATTCTCCCTAATTCCTCCATTTATGAACCTCCTTTCAATCTCCCTCACTGTCTTTCCTCCCTCGCACCCCGTTTTGACCCAAAAAAGTTGAACCTTCAATTCCGTGGATGGCGTTACGACCACCAAGATTTGCAGAGTTGGTTGCTCCACTTGGCTTCTAAGCACCAATCTACATGGAAGAAAGCTGGTATCTTTGAAGCCATCTTCAGTTCCACGTACCAAATCAAAAGGAAAAAGGATTTGGTTTGTGGGTTTGCAGAGAAATGGTGTTGTGAGACCAACACCTTCATCTTTCCATGGGGTGAAGCAACTATCACATTGGAGGATGTTATGGTTTTGGGAGGCTTTTCTGTTTTGGGATACTCCATTTTAAGTCCTATTGAAAGCAGAGAACTGAAAGAAATAGAAGACAAACTTGAGGAAGAGCGAATTGGACTTTACAATCGCGAGGGTGGGGTTAGAGTTGCTTACACACAACTATGGATGAAGAAGTTCATGAAGAGTGGAAGTGAATTAGAGCACGAAGCATTCCTTGTGTTCTGGCTGTCCAGGTATGTTTTCCATAATTCTCTCAATGCAGTCAATAAGGCTGTTTTCTCCATTGCAATTCGTCTAGCTAGGGGGATTGGAGTTGCGCTTGCACCAGCTATTCTTGCTCACATTTATAGAGATTTGAGTCTGCTCAAAAGGACAATTGTATCTTCAAATGAATTAAATGTCAAGAATGCTTTTGTACTAGAACTCATAATCAAGTCACAGTTTCAATTAGTTCAGGTTTGGGCATGGGAACGATTTCTGGAACTTAGGCCAAAGCCCAAAGTTATATGCTATGGTGAGCCGAGATTGGCTCGATGGGATAAAGTAGACTGTCTGAATGTTGGAGATATGAGGAGGGTTTTAGACTCAGCAGGTGAAGGTTTCATGTGGCGCCCTTATGCCATGGCCATTAAGAACTGGAATTTTCCTAGATACTATGTTGAAAAGGAAGAGTGGGTGTTGGTTGGTGCAGGCTTGGATGATGATCTATTGTCATTTGCCATGTGCTTGAGGGTGGCTGAGTTAGTTGGATTTGATACTATACAGCAGTACCTTCCACATAGAGTAGCTAGGCAATTTGGATTTGATCAAGACCTTCCGTGTTCTGTTTCTGGACACAGCCAAAATTATGACAACACGAAATTGTATATTCCATCCAGGCTTTCTGAGGCAGATGTTAGCATTAGATACTTAAATTGGTGGAAGGAATCTGTGTCAGGCCTCGAACAGAGACATATTCCATTGAAAAAGAAAGTTAAGAGAGCTGTAGACTTGATATATGATGCTTCCAGTCCTTGTATTTGTTCTCCAAAGAATTCAGAAGAACTTGTGCAGGTTTCTGCAGGACGGAATGAAGGTGAATATTCTTTTTGTCCTCCAGGATTTTCTCTCAAAAGGAATAGAATGGAAGCTGGAGATCCTATAGACGAAGATGATCTAACTATATCAGAGGCTTTGAAACTTAAGAAGAAGCTTAAAATTGTTGAAACTGGAAAATATACTGACAGTGCGAAGTTGTCAAGTCCCAATCAAATCTGTGCATATTCATCTGCAGATGAAAGTTCTATGAATATTATGAAGTCAAAAATACTGGAAAAAGAAGTTGTGTTGAGTAGTGAAGCGGTGACTTGGGGAAGTAAAGGTCATTGGAAACTGGACAAGGTAATCATGAGTCAGGAAAGAAGTCTAAGTAATGACATGGTGAGCATCGTTGGCAATAAATGTCCTAGCAGCACCTCTTTATCTGGTAAACCGGAATGTGGTAGCAGCATGTCTTTATGTAAGAAACGGGAATGTGCTAGCAGCAGTTCTTTATTTGTGAAACAAGAATGTACTAGCAGCGGCTCTTTATTTGTAAAACTGGAATGTGCTAGCACCAGCCCTTCAATTGCAGATGAAGGTACTTTTGTTAATACTAAGACGTCTGAAAGATTGGAGGAAGAGGTTCCATTCATTAAAGCTTTGATCTGGGGAGGTAAGGGTAAGAGGAAAATGAAAAATGTAATGAGAAGTAAGGCAAGAAGCAGATCCTTATTCAAGAAACGGGAAGATGGCAGCAGCAGCATTTCATTTGAAAAACGAGTTTCAGAGCTTAAAGCTAAGGTTTACAGGCTGGAAAAGGTGGTTCAGGTGTTGAAAGAAAATACTTTTGGGAAGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

759

Amino Acids

86.24

Weight (kDa)

8.98

Isoelectric Point (pI)

46.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 90 - 441 1.2e-103 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000264)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48145 AT1G50745
fragaria_vesca FvH4_3g22280 FvH4_3g22281 FvH4_3g22290 FvH4_3g22300 FvH4_3g22321 FvH4_3g22330 FvH4_3g22330 FvH4_3g22331
rosa_chinensis RchiOBHm_Chr5g0038351 RchiOBHm_Chr5g0038361 RchiOBHm_Chr5g0038371 RchiOBHm_Chr5g0038381 RchiOBHm_Chr5g0038421 RchiOBHm_Chr5g0038451 RchiOBHm_Chr5g0038471 RchiOBHm_Chr5g0038491 RchiOBHm_Chr5g0038561 RchiOBHm_Chr5g0038731 RchiOBHm_Chr5g0038741 RchiOBHm_Chr5g0038771 RchiOBHm_Chr5g0038781 RchiOBHm_Chr5g0038791 RchiOBHm_Chr5g0038801 RchiOBHm_Chr5g0038831
rosa_laevigata RLG00000008815 RLG00000020213 RLG00000033850 RLG00000033864 RLG00000033875
rosa_multiflora Rmu_co8006804.1_g000001 Rmu_co8168012.1_g000001 Rmu_co8236409.1_g000001 Rmu_co8247247.1_g000001 Rmu_co8440391.1_g000001 Rmu_sc0000533.1_g000088 Rmu_sc0003198.1_g000005 Rmu_sc0003198.1_g000006 Rmu_sc0003198.1_g000007 Rmu_sc0003198.1_g000008 Rmu_sc0003198.1_g000013 Rmu_sc0005722.1_g000005 Rmu_sc0005722.1_g000007 Rmu_sc0005722.1_g000012 Rmu_sc0005722.1_g000013 Rmu_sc0005836.1_g000001 Rmu_sc0009149.1_g000006 Rmu_sc0009149.1_g000018 Rmu_sc0009149.1_g000020 Rmu_sc0017397.1_g000004 Rmu_sc0025071.1_g000001 Rmu_sc0032545.1_g000001 Rmu_sc0038346.1_g000001
rosa_roxburghii Rroxscaffold_1G00042150 Rroxscaffold_1G00042180 Rroxscaffold_1G00042230 Rroxscaffold_1G00042240 Rroxscaffold_1G00042260 Rroxscaffold_1G00042320 Rroxscaffold_1G00042330 Rroxscaffold_1G00042350 Rroxscaffold_1G00042360 Rroxscaffold_1G00042370 Rroxscaffold_1G00042400 Rroxscaffold_1G00042430 Rroxscaffold_1G00042440 Rroxscaffold_1G00042510 Rroxscaffold_1G00042580 Rroxscaffold_1G00042620
rosa_rugosa Rorug05G0172200 Rorug05G0172300 Rorug05G0172500 Rorug05G0173100 Rorug05G0173200.1 Rorug05G0173600 Rorug05G0173800 Rorug05G0174000 Rorug05G0174100 Rorug05G0174200 Rorug05G0174200 Rorug05G0174400 Rorug05G0174500 Rorug05G0174600 Rorug05G0174700 Rorug05G0174800
rosa_samantha Rh5AG259600 Rh5AG260200 Rh5AG260600 Rh5AG260800 Rh5AG261300 Rh5AG261400 Rh5AG261500 Rh5AG261700 Rh5AG261900 Rh5BG263600 Rh5BG264200 Rh5BG264500 Rh5BG264800 Rh5BG265100 Rh5BG265200 Rh5BG265500 Rh5BG265600 Rh5BG266000 Rh5CG295900 Rh5CG296700 Rh5CG296800 Rh5CG296900 Rh5CG297200 Rh5CG297700 Rh5CG297900 Rh5CG298100 Rh5CG298200 Rh5CG298300 Rh5CG298400 Rh5CG298500 Rh5CG298900 Rh5CG299200 Rh6DG125700
rosa_wichuraiana Rw0G001950 Rw0G001960 Rw0G013290 Rw5G024020 Rw5G024310 Rw5G024340 Rw5G024350 Rw5G024370 Rw5G024380 Rw5G024390 Rw5G024400 Rw5G024420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 980
AatII GACGTC 1 cut(s) 2042
Acc36I ACCTGC 2 cut(s) 980, 1441
AccB1I GGYRCC 1 cut(s) 1008
AccB7I CCANNNNNTGG 1 cut(s) 41
AccI GTMKAC 2 cut(s) 945, 1386
AccII CGCG 1 cut(s) 528
AciI CCGC 2 cut(s) 1739, 1959
AclWI GGATC 2 cut(s) 1529, 2139
AcoI YGGCCR 1 cut(s) 1023
AcsI RAATTY 2 cut(s) 1039, 1432
AcuI CTGAAG 1 cut(s) 271
AcyI GRCGYC 2 cut(s) 1009, 2039
AfaI GTAC 5 cut(s) 299, 816, 1169, 1951, 2020
AfiI CCNNNNNNNGG 2 cut(s) 41, 1877
AflII CTTAAG 1 cut(s) 1580
AjnI CCWGG 3 cut(s) 629, 1274, 1495
AjuI GAANNNNNNNTTGG 5 cut(s) 305, 337, 495, 527, 2250
Alw21I GWGCWC 1 cut(s) 603
Alw26I GTCTC 3 cut(s) 39, 350, 1342
AlwI GGATC 2 cut(s) 1529, 2139
AoxI GGCC 3 cut(s) 887, 1023, 1336
ApeKI GCWGC 7 cut(s) 1848, 1884, 1920, 1956, 2172, 2175, 2178
ApoI RAATTY 2 cut(s) 1039, 1432
Asp700I GAANNNNTTC 3 cut(s) 572, 873, 2061
AspLEI GCGC 2 cut(s) 718, 1011
AsuHPI GGTGA 7 cut(s) 24, 395, 926, 1004, 1487, 1753, 1831
AsuNHI GCTAGC 2 cut(s) 1916, 1988
BaeI ACNNNNGTAYC 6 cut(s) 762, 795, 1151, 1184, 2010, 2043
BalI TGGCCA 1 cut(s) 1025
BanI GGYRCC 1 cut(s) 1008
BbsI GAAGAC 1 cut(s) 495
Bbv12I GWGCWC 1 cut(s) 603
BbvI GCAGC 7 cut(s) 1860, 1896, 1932, 1968, 2184, 2187, 2190
BccI CCATC 5 cut(s) 183, 290, 927, 1279, 2162
BciT130I CCWGG 3 cut(s) 631, 1276, 1497
BciVI GTATCC 1 cut(s) 434
BclI TGATCA 1 cut(s) 1204
BcoDI GTCTC 3 cut(s) 39, 350, 1342
BfaI CTAG 9 cut(s) 695, 699, 818, 1047, 1188, 1845, 1917, 1953, 1989
BfmI CTRYAG 4 cut(s) 1383, 1458, 1539, 1668
BfoI RGCGCY 1 cut(s) 1012
BfrI CTTAAG 1 cut(s) 1580
BfuAI ACCTGC 2 cut(s) 980, 1441
BfuI GTATCC 1 cut(s) 434
BisI GCNGC 8 cut(s) 1849, 1885, 1921, 1957, 1960, 2173, 2176, 2179
BlsI GCNGC 8 cut(s) 1850, 1886, 1922, 1958, 1961, 2174, 2177, 2180
Bme1390I CCNGG 3 cut(s) 631, 1276, 1497
BmiI GGNNCC 2 cut(s) 1010, 2064
BmrFI CCNGG 3 cut(s) 631, 1276, 1497
BmsI GCATC 2 cut(s) 1390, 1833
BmtI GCTAGC 2 cut(s) 1920, 1992
BpiI GAAGAC 1 cut(s) 495
BplI GAGNNNNNCTC 2 cut(s) 913, 945
BpmI CTGGAG 2 cut(s) 1479, 1551
Bpu10I CCTNAGC 1 cut(s) 2217
BpuEI CTTGAG 2 cut(s) 518, 1147
BsaAI YACGTR 1 cut(s) 297
BsaBI GATNNNNATC 1 cut(s) 1101
BsaHI GRCGYC 2 cut(s) 1009, 2039
BsaI GGTCTC 2 cut(s) 39, 350
BsaJI CCNNGG 3 cut(s) 184, 377, 1020
BsaWI WCCGGW 1 cut(s) 1870
BsaXI ACNNNNNCTCC 2 cut(s) 69, 99
Bsc4I CCNNNNNNNGG 2 cut(s) 41, 1877
Bse1I ACTGG 7 cut(s) 43, 1040, 1407, 1612, 1713, 1776, 1983
Bse3DI GCAATG 1 cut(s) 681
Bse8I GATNNNNATC 1 cut(s) 1101
BseBI CCWGG 3 cut(s) 631, 1276, 1497
BseDI CCNNGG 3 cut(s) 184, 377, 1020
BseGI GGATG 5 cut(s) 194, 412, 570, 1102, 1271
BseJI GATNNNNATC 1 cut(s) 1101
BseLI CCNNNNNNNGG 2 cut(s) 41, 1877
BseMI GCAATG 1 cut(s) 681
BseMII CTCAG 3 cut(s) 999, 1128, 1275
BseNI ACTGG 7 cut(s) 43, 1040, 1407, 1612, 1713, 1776, 1983
BseRI GAGGAG 1 cut(s) 985
BseXI GCAGC 7 cut(s) 1860, 1896, 1932, 1968, 2184, 2187, 2190
BsgI GTGCAG 2 cut(s) 1107, 1469
Bsh1236I CGCG 1 cut(s) 528
BshFI GGCC 3 cut(s) 889, 1025, 1338
BshNI GGYRCC 1 cut(s) 1008
BsiHKAI GWGCWC 1 cut(s) 603
BsiSI CCGG 1 cut(s) 1871
BslFI GGGAC 1 cut(s) 1626
BslI CCNNNNNNNGG 2 cut(s) 41, 1877
BsmAI GTCTC 3 cut(s) 39, 350, 1342
BsmFI GGGAC 1 cut(s) 1626
BsmI GAATGC 2 cut(s) 608, 811
BsnI GGCC 3 cut(s) 889, 1025, 1338
Bso31I GGTCTC 2 cut(s) 39, 350
Bsp1286I GDGCHC 1 cut(s) 603
Bsp143I GATC 6 cut(s) 1102, 1204, 1534, 1552, 2082, 2144
Bsp19I CCATGG 2 cut(s) 377, 1020
Bsp68I TCGCGA 1 cut(s) 528
BspACI CCGC 2 cut(s) 1739, 1959
BspANI GGCC 3 cut(s) 889, 1025, 1338
BspCNI CTCAG 3 cut(s) 998, 1129, 1276
BspFNI CGCG 1 cut(s) 528
BspHI TCATGA 2 cut(s) 576, 1785
BspLI GGNNCC 2 cut(s) 1010, 2064
BspMAI CTGCAG 2 cut(s) 1462, 1672
BspMI ACCTGC 2 cut(s) 980, 1441
BspOI GCTAGC 2 cut(s) 1920, 1992
BspPI GGATC 2 cut(s) 1529, 2139
BspQI GCTCTTC 1 cut(s) 498
BspT107I GGYRCC 1 cut(s) 1008
BspTI CTTAAG 1 cut(s) 1580
BspTNI GGTCTC 2 cut(s) 39, 350
BsrDI GCAATG 1 cut(s) 681
BsrI ACTGG 7 cut(s) 43, 1040, 1407, 1612, 1713, 1776, 1983
BssECI CCNNGG 3 cut(s) 184, 377, 1020
BssMI GATC 6 cut(s) 1102, 1204, 1534, 1552, 2082, 2144
BssNI GRCGYC 2 cut(s) 1009, 2039
BssT1I CCWWGG 2 cut(s) 377, 1020
Bst2UI CCWGG 3 cut(s) 631, 1276, 1497
Bst4CI ACNGT 4 cut(s) 131, 840, 950, 1625
Bst6I CTCTTC 6 cut(s) 3, 498, 575, 1062, 2052, 2267
BstACI GRCGYC 2 cut(s) 1009, 2039
BstAFI CTTAAG 1 cut(s) 1580
BstBAI YACGTR 1 cut(s) 297
BstC8I GCNNGC 4 cut(s) 720, 1090, 1918, 1990
BstDEI CTNAG 8 cut(s) 240, 884, 985, 1137, 1284, 1805, 2034, 2217
BstDSI CCRYGG 3 cut(s) 184, 377, 1020
BstF5I GGATG 5 cut(s) 194, 412, 570, 1102, 1271
BstFNI CGCG 1 cut(s) 528
BstH2I RGCGCY 1 cut(s) 1012
BstHHI GCGC 2 cut(s) 718, 1011
BstKTI GATC 6 cut(s) 1105, 1207, 1537, 1555, 2085, 2147
BstMAI GTCTC 3 cut(s) 39, 350, 1342
BstMBI GATC 6 cut(s) 1102, 1204, 1534, 1552, 2082, 2144
BstMWI GCNNNNNNNGC 5 cut(s) 63, 72, 734, 1830, 2178
BstNI CCWGG 3 cut(s) 631, 1276, 1497
BstNSI RCATGY 1 cut(s) 1891
BstSCI CCNGG 3 cut(s) 629, 1274, 1495
BstSFI CTRYAG 4 cut(s) 1383, 1458, 1539, 1668
BstUI CGCG 1 cut(s) 528
BstV1I GCAGC 7 cut(s) 1860, 1896, 1932, 1968, 2184, 2187, 2190
BstV2I GAAGAC 1 cut(s) 495
BstX2I RGATCY 2 cut(s) 1534, 2144
BstYI RGATCY 2 cut(s) 1534, 2144
BsuI GTATCC 1 cut(s) 434
BsuRI GGCC 3 cut(s) 889, 1025, 1338
BtgI CCRYGG 3 cut(s) 184, 377, 1020
BtsCI GGATG 5 cut(s) 194, 412, 570, 1102, 1271
BtsIMutI CAGTG 2 cut(s) 127, 1630
BtuMI TCGCGA 1 cut(s) 528
BveI ACCTGC 2 cut(s) 980, 1441
Cac8I GCNNGC 4 cut(s) 720, 1090, 1918, 1990
CciI TCATGA 2 cut(s) 576, 1785
CfoI GCGC 2 cut(s) 718, 1011
Csp6I GTAC 5 cut(s) 298, 815, 1168, 1950, 2019
CviQI GTAC 5 cut(s) 298, 815, 1168, 1950, 2019
DdeI CTNAG 8 cut(s) 240, 884, 985, 1137, 1284, 1805, 2034, 2217
DinI GGCGCC 1 cut(s) 1010
DpnI GATC 6 cut(s) 1104, 1206, 1536, 1554, 2084, 2146
DpnII GATC 6 cut(s) 1102, 1204, 1534, 1552, 2082, 2144
EaeI YGGCCR 1 cut(s) 1023
Eam1104I CTCTTC 6 cut(s) 3, 498, 575, 1062, 2052, 2267
EarI CTCTTC 6 cut(s) 3, 498, 575, 1062, 2052, 2267
Eco130I CCWWGG 2 cut(s) 377, 1020
Eco147I AGGCCT 1 cut(s) 1338
Eco31I GGTCTC 2 cut(s) 39, 350
Eco57I CTGAAG 1 cut(s) 271
EcoRI GAATTC 1 cut(s) 1432
EcoRII CCWGG 3 cut(s) 629, 1274, 1495
EcoT14I CCWWGG 2 cut(s) 377, 1020
EgeI GGCGCC 1 cut(s) 1010
EheI GGCGCC 1 cut(s) 1010
ErhI CCWWGG 2 cut(s) 377, 1020
FalI AAGNNNNNCTT 4 cut(s) 480, 512, 597, 629
FaqI GGGAC 1 cut(s) 1626
FbaI TGATCA 1 cut(s) 1204
FblI GTMKAC 2 cut(s) 945, 1386
Fnu4HI GCNGC 8 cut(s) 1849, 1885, 1921, 1957, 1960, 2173, 2176, 2179
FokI GGATG 5 cut(s) 201, 419, 577, 1109, 1258
Fsp4HI GCNGC 8 cut(s) 1849, 1885, 1921, 1957, 1960, 2173, 2176, 2179
FspBI CTAG 9 cut(s) 695, 699, 818, 1047, 1188, 1845, 1917, 1953, 1989
GlaI GCGC 2 cut(s) 717, 1010
GluI GCNGC 8 cut(s) 1849, 1885, 1921, 1957, 1960, 2173, 2176, 2179
GsuI CTGGAG 2 cut(s) 1479, 1551
HaeII RGCGCY 1 cut(s) 1012
HaeIII GGCC 3 cut(s) 889, 1025, 1338
HapII CCGG 1 cut(s) 1871
HhaI GCGC 2 cut(s) 718, 1011
Hin1I GRCGYC 2 cut(s) 1009, 2039
Hin6I GCGC 2 cut(s) 716, 1009
HinP1I GCGC 2 cut(s) 716, 1009
HindIII AAGCTT 2 cut(s) 1589, 2076
HinfI GANTC 4 cut(s) 757, 983, 1325, 1789
HpaII CCGG 1 cut(s) 1871
HphI GGTGA 7 cut(s) 24, 395, 926, 1004, 1487, 1753, 1831
Hpy166II GTNNAC 4 cut(s) 946, 1387, 1868, 2224
Hpy188I TCNGA 6 cut(s) 954, 1285, 1438, 1567, 2044, 2206
Hpy188III TCNNGA 9 cut(s) 527, 577, 802, 878, 1208, 1230, 1786, 1793, 2155
Hpy8I GTNNAC 4 cut(s) 946, 1387, 1868, 2224
HpyAV CCTTC 9 cut(s) 185, 376, 989, 1181, 1223, 1315, 1466, 2009, 2010
HpyCH4III ACNGT 4 cut(s) 131, 840, 950, 1625
HpyCH4IV ACGT 2 cut(s) 296, 2039
HpyF10VI GCNNNNNNNGC 5 cut(s) 63, 72, 734, 1830, 2178
HpyF3I CTNAG 8 cut(s) 240, 884, 985, 1137, 1284, 1805, 2034, 2217
HpySE526I ACGT 2 cut(s) 296, 2039
Hsp92I GRCGYC 2 cut(s) 1009, 2039
HspAI GCGC 2 cut(s) 716, 1009
KasI GGCGCC 1 cut(s) 1008
Ksp22I TGATCA 1 cut(s) 1204
Kzo9I GATC 6 cut(s) 1102, 1204, 1534, 1552, 2082, 2144
LguI GCTCTTC 1 cut(s) 498
LmnI GCTCC 1 cut(s) 231
Lsp1109I GCAGC 7 cut(s) 1860, 1896, 1932, 1968, 2184, 2187, 2190
LweI GCATC 2 cut(s) 1390, 1833
MaeI CTAG 9 cut(s) 695, 699, 818, 1047, 1188, 1845, 1917, 1953, 1989
MaeII ACGT 2 cut(s) 296, 2039
MaeIII GTNAC 3 cut(s) 194, 834, 1741
MalI GATC 6 cut(s) 1104, 1206, 1536, 1554, 2084, 2146
MboI GATC 6 cut(s) 1102, 1204, 1534, 1552, 2082, 2144
MfeI CAATTG 2 cut(s) 774, 2004
MflI RGATCY 2 cut(s) 1534, 2144
MhlI GDGCHC 1 cut(s) 603
MlsI TGGCCA 1 cut(s) 1025
MluNI TGGCCA 1 cut(s) 1025
Mly113I GGCGCC 1 cut(s) 1009
MlyI GAGTC 3 cut(s) 766, 977, 1798
MmeI TCCRAC 2 cut(s) 940, 1126
Mox20I TGGCCA 1 cut(s) 1025
MroXI GAANNNNTTC 3 cut(s) 572, 873, 2061
MscI TGGCCA 1 cut(s) 1025
MslI CAYNNNNRTG 1 cut(s) 559
Msp20I TGGCCA 1 cut(s) 1025
MspA1I CMGCKG 1 cut(s) 1959
MspCI CTTAAG 1 cut(s) 1580
MspI CCGG 1 cut(s) 1871
MspR9I CCNGG 3 cut(s) 631, 1276, 1497
MunI CAATTG 2 cut(s) 774, 2004
Mva1269I GAATGC 2 cut(s) 608, 811
MvaI CCWGG 3 cut(s) 631, 1276, 1497
MvnI CGCG 1 cut(s) 528
MwoI GCNNNNNNNGC 5 cut(s) 63, 72, 734, 1830, 2178
NarI GGCGCC 1 cut(s) 1009
NcoI CCATGG 2 cut(s) 377, 1020
NdeII GATC 6 cut(s) 1102, 1204, 1534, 1552, 2082, 2144
NheI GCTAGC 2 cut(s) 1916, 1988
NlaIV GGNNCC 2 cut(s) 1010, 2064
NmeAIII GCCGAG 1 cut(s) 945
NmuCI GTSAC 2 cut(s) 834, 1741
NruI TCGCGA 1 cut(s) 528
NspI RCATGY 1 cut(s) 1891
PagI TCATGA 2 cut(s) 576, 1785
PaqCI CACCTGC 1 cut(s) 980
PceI AGGCCT 1 cut(s) 1338
PciSI GCTCTTC 1 cut(s) 498
PctI GAATGC 2 cut(s) 608, 811
PdmI GAANNNNTTC 3 cut(s) 572, 873, 2061
PfeI GAWTC 1 cut(s) 1325
PflMI CCANNNNNTGG 1 cut(s) 41
PfoI TCCNGGA 1 cut(s) 1495
PkrI GCNGC 8 cut(s) 1850, 1886, 1922, 1958, 1961, 2174, 2177, 2180
PleI GAGTC 3 cut(s) 765, 977, 1797
PluTI GGCGCC 1 cut(s) 1012
PpsI GAGTC 3 cut(s) 765, 977, 1797
Ppu21I YACGTR 1 cut(s) 297
Psp6I CCWGG 3 cut(s) 629, 1274, 1495
PspGI CCWGG 3 cut(s) 629, 1274, 1495
PspN4I GGNNCC 2 cut(s) 1010, 2064
PstI CTGCAG 2 cut(s) 1462, 1672
PsuI RGATCY 2 cut(s) 1534, 2144
RruI TCGCGA 1 cut(s) 528
RsaI GTAC 5 cut(s) 299, 816, 1169, 1951, 2020
RsaNI GTAC 5 cut(s) 298, 815, 1168, 1950, 2019
RseI CAYNNNNRTG 1 cut(s) 559
SapI GCTCTTC 1 cut(s) 498
SatI GCNGC 8 cut(s) 1849, 1885, 1921, 1957, 1960, 2173, 2176, 2179
Sau3AI GATC 6 cut(s) 1102, 1204, 1534, 1552, 2082, 2144
SchI GAGTC 3 cut(s) 766, 977, 1798
ScrFI CCNGG 3 cut(s) 631, 1276, 1497
SduI GDGCHC 1 cut(s) 603
SfaNI GCATC 2 cut(s) 1390, 1833
SfcI CTRYAG 4 cut(s) 1383, 1458, 1539, 1668
SfoI GGCGCC 1 cut(s) 1010
SmiMI CAYNNNNRTG 1 cut(s) 559
SmlI CTYRAG 3 cut(s) 497, 1126, 1580
SmoI CTYRAG 3 cut(s) 497, 1126, 1580
SseBI AGGCCT 1 cut(s) 1338
SsiI CCGC 2 cut(s) 1739, 1959
SspDI GGCGCC 1 cut(s) 1008
SspI AATATT 2 cut(s) 1481, 1690
SspMI CTAG 9 cut(s) 695, 699, 818, 1047, 1188, 1845, 1917, 1953, 1989
StuI AGGCCT 1 cut(s) 1338
StyD4I CCNGG 3 cut(s) 629, 1274, 1495
StyI CCWWGG 2 cut(s) 377, 1020
TaaI ACNGT 4 cut(s) 131, 840, 950, 1625
TaiI ACGT 2 cut(s) 299, 2042
TaqI TCGA 2 cut(s) 931, 1341
TatI WGTACW 2 cut(s) 814, 1949
TauI GCSGC 1 cut(s) 1962
TfiI GAWTC 1 cut(s) 1325
TscAI CASTG 2 cut(s) 134, 1630
TseFI GTSAC 2 cut(s) 834, 1741
TseI GCWGC 7 cut(s) 1848, 1884, 1920, 1956, 2172, 2175, 2178
Tsp45I GTSAC 2 cut(s) 834, 1741
TspGWI ACGGA 3 cut(s) 173, 1206, 1480
TspRI CASTG 2 cut(s) 134, 1630
Van91I CCANNNNNTGG 1 cut(s) 41
Vha464I CTTAAG 1 cut(s) 1580
XapI RAATTY 2 cut(s) 1039, 1432
XceI RCATGY 1 cut(s) 1891
XmiI GTMKAC 2 cut(s) 945, 1386
XmnI GAANNNNTTC 3 cut(s) 572, 873, 2061
XspI CTAG 9 cut(s) 695, 699, 818, 1047, 1188, 1845, 1917, 1953, 1989
ZraI GACGTC 1 cut(s) 2040
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.