Rh5AG260800

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000264
Physical Location & Seq
Forward (+)
34040629 .. 34063357
22729 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG260800.1

Sequence Viewer

Length: 1803 bp
ATGCAGGACAGAATCACAGACACCATGATTGAAGCGCAAGAAAATGAGGCCATGGTTTCACCAACTGGAGGAGACCCATTTCGGAAAAGAGCCTACTTTCTCAAACCCATTGTTGCTTCCTCCATTGATGAACCTCCTCCTGAGCTTTCCCAGTGTTTTAGCTCCCTCCCATCAGGTTTTGAGCCCAAGAAATTGGTTCTTGAAATCCGTGGATGGCGTCTGGACCACAAAGATTTGAAGACTTGGGTGGAGCACTTGGCTTTAACTCACCAAGGTACATGGAGGAGAGCTGGAATCTATGATGCCATCTTCAATTCCATGTGCGAAATCCGAAAGAAGAATGATTTGGTTCGTGGGCTTGGCGAGAAATGGTGCTGTGACACCAACACGTTCATTTTTGATTGGGGTGAAGCAACTATTTCTTTGGAAGATGTGATGGTATTGGGAGGGTTTTCTGTTTTGGGAGACTCTGTTTTCAGTCCTCTTGAAAGCAGAGAACTAAGAGAAGTGGAGGATAGACTTGAGCAAGTGCGGAAGGGATTTCAAAATAAAAGAGGTGATCAAGGCTGGGGAGTTGCCTACACTGATTTGTGGATGAAGGAATTCATGAAAGGTGGGAGTGATTTGGAGCATGAGGCATTTCTTGTGTTCTGGTTGTCTAGGTATGTTTTTCATGATGCTCGTAATTCAGTGAACAAGGCTGTGTTTTCCATTGCAATTCGTTTAGCTAGAGGGACTCGGATTGCGCTTGCGCCTGCTGTTCTTGCAAACATTTATAGAGATTTGGGTATGTTGAAGAGGAGTATTGCAGCTTCAAATGAGTTGAAAGTGACGATCAAGTCGCCATTCCATTTGGTTCAGGTTTGGGCTTGGGAGAGATTTCTGGAACTTCGGCCAAGGCCAAATGGTATCAGAAATGCTGAGCCGAGATTGGCTCGATGGGATAAAGTATTTGGTCTAAACGTTGGAAACTTGAGGAGCGTTTTGGATTCGGCGGGAGAAGGTTTCTTGTGGCGCCCTTATGCCATTGCCATTGAGAACTGGAAACTTCCCAAGTATTTTGTGGAGAAGGAGAAGTGGGTGGTGGTTGGTCCCAGTTTGACTGATGATGAATTGCTGTCATTTTCGATATGCCTGAGGGTGAATGAGTTGGTTGGATTTGGTACAAAACAGCAGTACCTTCCGCACCGAGTGGCTATGCAATTTGGTTACGATCAGGACATCCCAGGTTTTGTTGCTCCATTGATTCACAAAACTAATATGACCTGGAAGCAGTACTTGAAAGAACTTGAGTATGTGATATTGTATATACCATCGAGGCTTTCTGAGGCGGATGCTAGCACAAGATACTTAAAGTGGTGGAAGGAATCCACGGCAGGCCTCAAACACAGAAGTATGTCACCAGAAAAGAAAGCAAGGGAAGCTGGCAATGAGATATATGATGTCAGCATTCCTTGTATCCGTTCTCCAAAGAAGGCAGAAGTACTCGTGCAGGTTTCTGCAGGAAGGAATGTATACGAAGGTAATGATTCCCTTGTGCCTCCCGGATTCCCTCCAAAAAGGGGAAAGTATGGTTCAGAATATACCACAATTATTTCTAGGTTGGAACTTGAGCAGAATGTTCAAAAGAAATTGGACAAAGCTAAGAAGGAGAGGGACACATATCTTGTGCAGCTTCATCAATGTGAGAAAAGAATTGAGGAACTAAACAAGGAAGTGGAGGAAGTCAGGGGAAAACATGAAATAGAAGTTGCGACTCATAACAAAAATTTGGAAATTCTTAAGCAAACTTTGGAGAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

600

Amino Acids

69.03

Weight (kDa)

8.56

Isoelectric Point (pI)

41.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 98 - 455 2.1e-107 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000264)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48145 AT1G50745
fragaria_vesca FvH4_3g22280 FvH4_3g22281 FvH4_3g22290 FvH4_3g22300 FvH4_3g22321 FvH4_3g22330 FvH4_3g22330 FvH4_3g22331
rosa_chinensis RchiOBHm_Chr5g0038351 RchiOBHm_Chr5g0038361 RchiOBHm_Chr5g0038371 RchiOBHm_Chr5g0038381 RchiOBHm_Chr5g0038421 RchiOBHm_Chr5g0038451 RchiOBHm_Chr5g0038471 RchiOBHm_Chr5g0038491 RchiOBHm_Chr5g0038561 RchiOBHm_Chr5g0038731 RchiOBHm_Chr5g0038741 RchiOBHm_Chr5g0038771 RchiOBHm_Chr5g0038781 RchiOBHm_Chr5g0038791 RchiOBHm_Chr5g0038801 RchiOBHm_Chr5g0038831
rosa_laevigata RLG00000008815 RLG00000020213 RLG00000033850 RLG00000033864 RLG00000033875
rosa_multiflora Rmu_co8006804.1_g000001 Rmu_co8168012.1_g000001 Rmu_co8236409.1_g000001 Rmu_co8247247.1_g000001 Rmu_co8440391.1_g000001 Rmu_sc0000533.1_g000088 Rmu_sc0003198.1_g000005 Rmu_sc0003198.1_g000006 Rmu_sc0003198.1_g000007 Rmu_sc0003198.1_g000008 Rmu_sc0003198.1_g000013 Rmu_sc0005722.1_g000005 Rmu_sc0005722.1_g000007 Rmu_sc0005722.1_g000012 Rmu_sc0005722.1_g000013 Rmu_sc0005836.1_g000001 Rmu_sc0009149.1_g000006 Rmu_sc0009149.1_g000018 Rmu_sc0009149.1_g000020 Rmu_sc0017397.1_g000004 Rmu_sc0025071.1_g000001 Rmu_sc0032545.1_g000001 Rmu_sc0038346.1_g000001
rosa_roxburghii Rroxscaffold_1G00042150 Rroxscaffold_1G00042180 Rroxscaffold_1G00042230 Rroxscaffold_1G00042240 Rroxscaffold_1G00042260 Rroxscaffold_1G00042320 Rroxscaffold_1G00042330 Rroxscaffold_1G00042350 Rroxscaffold_1G00042360 Rroxscaffold_1G00042370 Rroxscaffold_1G00042400 Rroxscaffold_1G00042430 Rroxscaffold_1G00042440 Rroxscaffold_1G00042510 Rroxscaffold_1G00042580 Rroxscaffold_1G00042620
rosa_rugosa Rorug05G0172200 Rorug05G0172300 Rorug05G0172500 Rorug05G0173100 Rorug05G0173200.1 Rorug05G0173600 Rorug05G0173800 Rorug05G0174000 Rorug05G0174100 Rorug05G0174200 Rorug05G0174200 Rorug05G0174400 Rorug05G0174500 Rorug05G0174600 Rorug05G0174700 Rorug05G0174800
rosa_samantha Rh5AG259600 Rh5AG260200 Rh5AG260600 Rh5AG260800 Rh5AG261300 Rh5AG261400 Rh5AG261500 Rh5AG261700 Rh5AG261900 Rh5BG263600 Rh5BG264200 Rh5BG264500 Rh5BG264800 Rh5BG265100 Rh5BG265200 Rh5BG265500 Rh5BG265600 Rh5BG266000 Rh5CG295900 Rh5CG296700 Rh5CG296800 Rh5CG296900 Rh5CG297200 Rh5CG297700 Rh5CG297900 Rh5CG298100 Rh5CG298200 Rh5CG298300 Rh5CG298400 Rh5CG298500 Rh5CG298900 Rh5CG299200 Rh6DG125700
rosa_wichuraiana Rw0G001950 Rw0G001960 Rw0G013290 Rw5G024020 Rw5G024310 Rw5G024340 Rw5G024350 Rw5G024370 Rw5G024380 Rw5G024390 Rw5G024400 Rw5G024420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 838
Acc36I ACCTGC 1 cut(s) 1483
AccB1I GGYRCC 1 cut(s) 1014
AccI GTMKAC 1 cut(s) 1515
AciI CCGC 4 cut(s) 532, 995, 1184, 1331
AclI AACGTT 1 cut(s) 963
AcoI YGGCCR 1 cut(s) 893
AcsI RAATTY 3 cut(s) 602, 1768, 1776
AcyI GRCGYC 2 cut(s) 217, 1015
AdeI CACNNNGTG 1 cut(s) 1192
AfaI GTAC 5 cut(s) 277, 1165, 1178, 1277, 1485
AfiI CCNNNNNNNGG 2 cut(s) 68, 1562
AflII CTTAAG 1 cut(s) 1781
AflIII ACRYGT 1 cut(s) 387
AjnI CCWGG 2 cut(s) 1225, 1265
AjuI GAANNNNNNNTTGG 2 cut(s) 329, 361
AluBI AGCT 8 cut(s) 145, 162, 290, 728, 812, 1424, 1643, 1675
AluI AGCT 8 cut(s) 145, 162, 290, 728, 812, 1424, 1643, 1675
Alw21I GWGCWC 1 cut(s) 255
Alw26I GTCTC 2 cut(s) 66, 459
AoxI GGCC 4 cut(s) 48, 893, 899, 1378
ApeKI GCWGC 2 cut(s) 809, 1672
ApoI RAATTY 3 cut(s) 602, 1768, 1776
Asp700I GAANNNNTTC 1 cut(s) 602
AspLEI GCGC 4 cut(s) 37, 748, 754, 1017
AspS9I GGNCC 2 cut(s) 223, 1091
AsuC2I CCSGG 1 cut(s) 1545
AsuHPI GGTGA 6 cut(s) 51, 260, 419, 569, 1153, 1392
AsuNHI GCTAGC 1 cut(s) 1337
AvaII GGWCC 2 cut(s) 223, 1091
AxyI CCTNAGG 1 cut(s) 1136
BaeI ACNNNNGTAYC 2 cut(s) 1160, 1193
BanI GGYRCC 1 cut(s) 1014
BanII GRGCYC 1 cut(s) 186
BarI GAAGNNNNNNTAC 2 cut(s) 796, 828
BauI CACGAG 1 cut(s) 1487
BbsI GAAGAC 1 cut(s) 245
Bbv12I GWGCWC 1 cut(s) 255
BbvI GCAGC 2 cut(s) 821, 1684
BccI CCATC 6 cut(s) 178, 207, 314, 430, 933, 1321
BceAI ACGGC 1 cut(s) 1389
BciT130I CCWGG 2 cut(s) 1227, 1267
BciVI GTATCC 1 cut(s) 1469
BclI TGATCA 1 cut(s) 559
BcnI CCSGG 1 cut(s) 1545
BcoDI GTCTC 2 cut(s) 66, 459
BfaI CTAG 4 cut(s) 660, 729, 1338, 1599
BfmI CTRYAG 1 cut(s) 1500
BfoI RGCGCY 1 cut(s) 1018
BfrI CTTAAG 1 cut(s) 1781
BfuAI ACCTGC 1 cut(s) 1483
BfuI GTATCC 1 cut(s) 1469
BisI GCNGC 2 cut(s) 810, 1673
BlpI GCTNAGC 1 cut(s) 921
BlsI GCNGC 2 cut(s) 811, 1674
BmcAI AGTACT 2 cut(s) 1277, 1485
Bme1390I CCNGG 3 cut(s) 1227, 1267, 1545
Bme18I GGWCC 2 cut(s) 223, 1091
BmgT120I GGNCC 2 cut(s) 223, 1091
BmiI GGNNCC 2 cut(s) 1016, 1093
BmrFI CCNGG 3 cut(s) 1227, 1267, 1545
BmrI ACTGGG 2 cut(s) 145, 1089
BmsI GCATC 3 cut(s) 292, 667, 1324
BmtI GCTAGC 1 cut(s) 1341
BmuI ACTGGG 2 cut(s) 145, 1089
BpiI GAAGAC 1 cut(s) 245
BplI GAGNNNNNCTC 2 cut(s) 919, 951
BpmI CTGGAG 1 cut(s) 87
Bpu10I CCTNAGC 1 cut(s) 141
Bpu1102I GCTNAGC 1 cut(s) 921
BpuEI CTTGAG 4 cut(s) 542, 994, 1310, 1631
BpuMI CCSGG 1 cut(s) 1545
BsaHI GRCGYC 2 cut(s) 217, 1015
BsaI GGTCTC 1 cut(s) 66
BsaJI CCNNGG 6 cut(s) 51, 208, 271, 896, 1225, 1371
BsaXI ACNNNNNCTCC 2 cut(s) 456, 486
Bsc4I CCNNNNNNNGG 2 cut(s) 68, 1562
Bse1I ACTGG 4 cut(s) 70, 151, 1046, 1095
Bse21I CCTNAGG 1 cut(s) 1136
Bse3DI GCAATG 3 cut(s) 711, 1026, 1435
BseBI CCWGG 2 cut(s) 1227, 1267
BseDI CCNNGG 6 cut(s) 51, 208, 271, 896, 1225, 1371
BseGI GGATG 4 cut(s) 218, 600, 1221, 1339
BseLI CCNNNNNNNGG 2 cut(s) 68, 1562
BseMI GCAATG 3 cut(s) 711, 1026, 1435
BseMII CTCAG 4 cut(s) 132, 912, 1127, 1317
BseNI ACTGG 4 cut(s) 70, 151, 1046, 1095
BseRI GAGGAG 5 cut(s) 84, 126, 298, 814, 991
BseXI GCAGC 2 cut(s) 821, 1684
BseYI CCCAGC 1 cut(s) 567
BsgI GTGCAG 2 cut(s) 1511, 1691
BshFI GGCC 4 cut(s) 50, 895, 901, 1380
BshNI GGYRCC 1 cut(s) 1014
BsiHKAI GWGCWC 1 cut(s) 255
BsiSI CCGG 1 cut(s) 1545
BslFI GGGAC 3 cut(s) 748, 1077, 1670
BslI CCNNNNNNNGG 2 cut(s) 68, 1562
BsmAI GTCTC 2 cut(s) 66, 459
BsmFI GGGAC 3 cut(s) 748, 1077, 1670
BsmI GAATGC 1 cut(s) 1449
BsnI GGCC 4 cut(s) 50, 895, 901, 1380
Bso31I GGTCTC 1 cut(s) 66
Bsp1286I GDGCHC 2 cut(s) 186, 255
Bsp143I GATC 3 cut(s) 559, 834, 1213
Bsp1720I GCTNAGC 1 cut(s) 921
Bsp19I CCATGG 1 cut(s) 51
BspACI CCGC 4 cut(s) 532, 995, 1184, 1331
BspANI GGCC 4 cut(s) 50, 895, 901, 1380
BspCNI CTCAG 4 cut(s) 133, 913, 1128, 1318
BspHI TCATGA 2 cut(s) 606, 673
BspLI GGNNCC 2 cut(s) 1016, 1093
BspMAI CTGCAG 1 cut(s) 1504
BspMI ACCTGC 1 cut(s) 1483
BspOI GCTAGC 1 cut(s) 1341
BspT107I GGYRCC 1 cut(s) 1014
BspTI CTTAAG 1 cut(s) 1781
BspTNI GGTCTC 1 cut(s) 66
BsrDI GCAATG 3 cut(s) 711, 1026, 1435
BsrI ACTGG 4 cut(s) 70, 151, 1046, 1095
BssECI CCNNGG 6 cut(s) 51, 208, 271, 896, 1225, 1371
BssMI GATC 3 cut(s) 559, 834, 1213
BssNAI GTATAC 1 cut(s) 1516
BssNI GRCGYC 2 cut(s) 217, 1015
BssSI CACGAG 1 cut(s) 1487
BssT1I CCWWGG 3 cut(s) 51, 271, 896
Bst1107I GTATAC 1 cut(s) 1516
Bst2BI CACGAG 1 cut(s) 1487
Bst2UI CCWGG 2 cut(s) 1227, 1267
Bst6I CTCTTC 1 cut(s) 791
BstACI GRCGYC 2 cut(s) 217, 1015
BstAFI CTTAAG 1 cut(s) 1781
BstC8I GCNNGC 5 cut(s) 750, 756, 1339, 1378, 1426
BstDEI CTNAG 6 cut(s) 141, 500, 921, 1136, 1326, 1644
BstDSI CCRYGG 3 cut(s) 51, 208, 1371
BstF5I GGATG 4 cut(s) 218, 600, 1221, 1339
BstH2I RGCGCY 1 cut(s) 1018
BstHHI GCGC 4 cut(s) 37, 748, 754, 1017
BstKTI GATC 3 cut(s) 562, 837, 1216
BstMAI GTCTC 2 cut(s) 66, 459
BstMBI GATC 3 cut(s) 559, 834, 1213
BstMWI GCNNNNNNNGC 2 cut(s) 764, 1421
BstNI CCWGG 2 cut(s) 1227, 1267
BstSCI CCNGG 3 cut(s) 1225, 1265, 1543
BstSFI CTRYAG 1 cut(s) 1500
BstV1I GCAGC 2 cut(s) 821, 1684
BstV2I GAAGAC 1 cut(s) 245
BstXI CCANNNNNNTGG 1 cut(s) 193
BstZ17I GTATAC 1 cut(s) 1516
Bsu36I CCTNAGG 1 cut(s) 1136
BsuI GTATCC 1 cut(s) 1469
BsuRI GGCC 4 cut(s) 50, 895, 901, 1380
BtgI CCRYGG 3 cut(s) 51, 208, 1371
BtsCI GGATG 4 cut(s) 218, 600, 1221, 1339
BtsIMutI CAGTG 3 cut(s) 158, 582, 696
BveI ACCTGC 1 cut(s) 1483
Cac8I GCNNGC 5 cut(s) 750, 756, 1339, 1378, 1426
CciI TCATGA 2 cut(s) 606, 673
CfoI GCGC 4 cut(s) 37, 748, 754, 1017
Cfr13I GGNCC 2 cut(s) 223, 1091
CseI GACGC 1 cut(s) 206
Csp6I GTAC 5 cut(s) 276, 1164, 1177, 1276, 1484
CviAII CATG 8 cut(s) 25, 52, 279, 319, 607, 632, 674, 1739
CviQI GTAC 5 cut(s) 276, 1164, 1177, 1276, 1484
DdeI CTNAG 6 cut(s) 141, 500, 921, 1136, 1326, 1644
DinI GGCGCC 1 cut(s) 1016
DpnI GATC 3 cut(s) 561, 836, 1215
DpnII GATC 3 cut(s) 559, 834, 1213
DraIII CACNNNGTG 1 cut(s) 1192
DrdI GACNNNNNNGTC 1 cut(s) 838
DseDI GACNNNNNNGTC 1 cut(s) 838
EaeI YGGCCR 1 cut(s) 893
Eam1104I CTCTTC 1 cut(s) 791
EarI CTCTTC 1 cut(s) 791
EciI GGCGGA 1 cut(s) 1346
Eco130I CCWWGG 3 cut(s) 51, 271, 896
Eco147I AGGCCT 1 cut(s) 1380
Eco24I GRGCYC 1 cut(s) 186
Eco31I GGTCTC 1 cut(s) 66
Eco47I GGWCC 2 cut(s) 223, 1091
Eco81I CCTNAGG 1 cut(s) 1136
EcoRI GAATTC 1 cut(s) 602
EcoRII CCWGG 2 cut(s) 1225, 1265
EcoT14I CCWWGG 3 cut(s) 51, 271, 896
EcoT38I GRGCYC 1 cut(s) 186
EgeI GGCGCC 1 cut(s) 1016
EheI GGCGCC 1 cut(s) 1016
ErhI CCWWGG 3 cut(s) 51, 271, 896
FaeI CATG 8 cut(s) 28, 55, 282, 322, 610, 635, 677, 1742
FalI AAGNNNNNCTT 2 cut(s) 1262, 1294
FaqI GGGAC 3 cut(s) 748, 1077, 1670
FatI CATG 8 cut(s) 24, 51, 278, 318, 606, 631, 673, 1738
FauI CCCGC 1 cut(s) 988
FbaI TGATCA 1 cut(s) 559
FblI GTMKAC 1 cut(s) 1515
Fnu4HI GCNGC 2 cut(s) 810, 1673
FokI GGATG 4 cut(s) 225, 607, 1208, 1346
FriOI GRGCYC 1 cut(s) 186
Fsp4HI GCNGC 2 cut(s) 810, 1673
FspBI CTAG 4 cut(s) 660, 729, 1338, 1599
GlaI GCGC 4 cut(s) 36, 747, 753, 1016
GluI GCNGC 2 cut(s) 810, 1673
GsaI CCCAGC 1 cut(s) 571
GsuI CTGGAG 1 cut(s) 87
HaeII RGCGCY 1 cut(s) 1018
HaeIII GGCC 4 cut(s) 50, 895, 901, 1380
HapII CCGG 1 cut(s) 1545
HgaI GACGC 1 cut(s) 206
HhaI GCGC 4 cut(s) 37, 748, 754, 1017
Hin1I GRCGYC 2 cut(s) 217, 1015
Hin1II CATG 8 cut(s) 28, 55, 282, 322, 610, 635, 677, 1742
Hin6I GCGC 4 cut(s) 35, 746, 752, 1015
HinP1I GCGC 4 cut(s) 35, 746, 752, 1015
HpaII CCGG 1 cut(s) 1545
HphI GGTGA 6 cut(s) 51, 260, 419, 569, 1153, 1392
Hpy166II GTNNAC 2 cut(s) 694, 1516
Hpy188I TCNGA 6 cut(s) 84, 332, 741, 914, 1327, 1579
Hpy188III TCNNGA 8 cut(s) 140, 200, 221, 485, 607, 674, 884, 1217
Hpy8I GTNNAC 2 cut(s) 694, 1516
HpyCH4IV ACGT 2 cut(s) 389, 963
HpyCH4V TGCA 8 cut(s) 4, 716, 767, 809, 1201, 1492, 1502, 1672
HpyF10VI GCNNNNNNNGC 2 cut(s) 764, 1421
HpyF3I CTNAG 6 cut(s) 141, 500, 921, 1136, 1326, 1644
HpySE526I ACGT 2 cut(s) 389, 963
Hsp92I GRCGYC 2 cut(s) 217, 1015
Hsp92II CATG 8 cut(s) 28, 55, 282, 322, 610, 635, 677, 1742
HspAI GCGC 4 cut(s) 35, 746, 752, 1015
KasI GGCGCC 1 cut(s) 1014
Ksp22I TGATCA 1 cut(s) 559
Kzo9I GATC 3 cut(s) 559, 834, 1213
LmnI GCTCC 5 cut(s) 167, 250, 628, 978, 1243
Lsp1109I GCAGC 2 cut(s) 821, 1684
LweI GCATC 3 cut(s) 292, 667, 1324
MaeI CTAG 4 cut(s) 660, 729, 1338, 1599
MaeII ACGT 2 cut(s) 389, 963
MaeIII GTNAC 4 cut(s) 377, 829, 1208, 1398
MalI GATC 3 cut(s) 561, 836, 1215
MboI GATC 3 cut(s) 559, 834, 1213
MboII GAAGA 5 cut(s) 250, 301, 349, 440, 808
MhlI GDGCHC 2 cut(s) 186, 255
Mly113I GGCGCC 1 cut(s) 1015
MlyI GAGTC 3 cut(s) 461, 730, 1750
MmeI TCCRAC 3 cut(s) 946, 1135, 1584
MroXI GAANNNNTTC 1 cut(s) 602
MseI TTAA 3 cut(s) 263, 1352, 1782
MslI CAYNNNNRTG 1 cut(s) 1683
MspCI CTTAAG 1 cut(s) 1781
MspI CCGG 1 cut(s) 1545
MspR9I CCNGG 3 cut(s) 1227, 1267, 1545
Mva1269I GAATGC 1 cut(s) 1449
MvaI CCWGG 2 cut(s) 1227, 1267
MwoI GCNNNNNNNGC 2 cut(s) 764, 1421
NarI GGCGCC 1 cut(s) 1015
NciI CCSGG 1 cut(s) 1545
NcoI CCATGG 1 cut(s) 51
NdeII GATC 3 cut(s) 559, 834, 1213
NheI GCTAGC 1 cut(s) 1337
NlaIII CATG 8 cut(s) 28, 55, 282, 322, 610, 635, 677, 1742
NlaIV GGNNCC 2 cut(s) 1016, 1093
NmeAIII GCCGAG 1 cut(s) 951
NmuCI GTSAC 3 cut(s) 377, 829, 1398
PagI TCATGA 2 cut(s) 606, 673
PceI AGGCCT 1 cut(s) 1380
PctI GAATGC 1 cut(s) 1449
PdmI GAANNNNTTC 1 cut(s) 602
PfeI GAWTC 7 cut(s) 12, 294, 989, 1246, 1367, 1529, 1548
PfoI TCCNGGA 1 cut(s) 1543
PkrI GCNGC 2 cut(s) 811, 1674
PleI GAGTC 3 cut(s) 461, 730, 1750
PluTI GGCGCC 1 cut(s) 1018
PpsI GAGTC 3 cut(s) 461, 730, 1750
Psp1406I AACGTT 1 cut(s) 963
Psp6I CCWGG 2 cut(s) 1225, 1265
PspFI CCCAGC 1 cut(s) 567
PspGI CCWGG 2 cut(s) 1225, 1265
PspN4I GGNNCC 2 cut(s) 1016, 1093
PspPI GGNCC 2 cut(s) 223, 1091
PstI CTGCAG 1 cut(s) 1504
RsaI GTAC 5 cut(s) 277, 1165, 1178, 1277, 1485
RsaNI GTAC 5 cut(s) 276, 1164, 1177, 1276, 1484
RseI CAYNNNNRTG 1 cut(s) 1683
SaqAI TTAA 3 cut(s) 263, 1352, 1782
SatI GCNGC 2 cut(s) 810, 1673
Sau3AI GATC 3 cut(s) 559, 834, 1213
Sau96I GGNCC 2 cut(s) 223, 1091
ScaI AGTACT 2 cut(s) 1277, 1485
SchI GAGTC 3 cut(s) 461, 730, 1750
ScrFI CCNGG 3 cut(s) 1227, 1267, 1545
SduI GDGCHC 2 cut(s) 186, 255
SfaNI GCATC 3 cut(s) 292, 667, 1324
SfcI CTRYAG 1 cut(s) 1500
SfoI GGCGCC 1 cut(s) 1016
SinI GGWCC 2 cut(s) 223, 1091
SmiMI CAYNNNNRTG 1 cut(s) 1683
SmlI CTYRAG 5 cut(s) 521, 973, 1289, 1610, 1781
SmoI CTYRAG 5 cut(s) 521, 973, 1289, 1610, 1781
SseBI AGGCCT 1 cut(s) 1380
SsiI CCGC 4 cut(s) 532, 995, 1184, 1331
SspDI GGCGCC 1 cut(s) 1014
SspMI CTAG 4 cut(s) 660, 729, 1338, 1599
StuI AGGCCT 1 cut(s) 1380
StyD4I CCNGG 3 cut(s) 1225, 1265, 1543
StyI CCWWGG 3 cut(s) 51, 271, 896
TaiI ACGT 2 cut(s) 392, 966
TaqI TCGA 3 cut(s) 937, 1127, 1316
TatI WGTACW 2 cut(s) 1275, 1483
TfiI GAWTC 7 cut(s) 12, 294, 989, 1246, 1367, 1529, 1548
Tru1I TTAA 3 cut(s) 263, 1352, 1782
Tru9I TTAA 3 cut(s) 263, 1352, 1782
TscAI CASTG 3 cut(s) 158, 589, 696
TseFI GTSAC 3 cut(s) 377, 829, 1398
TseI GCWGC 2 cut(s) 809, 1672
Tsp45I GTSAC 3 cut(s) 377, 829, 1398
TspDTI ATGAA 9 cut(s) 144, 382, 595, 611, 623, 662, 1125, 1667, 1755
TspGWI ACGGA 2 cut(s) 197, 1451
TspRI CASTG 3 cut(s) 158, 589, 696
Vha464I CTTAAG 1 cut(s) 1781
VpaK11BI GGWCC 2 cut(s) 223, 1091
XapI RAATTY 3 cut(s) 602, 1768, 1776
XcmI CCANNNNNNNNNTGG 1 cut(s) 1060
XmiI GTMKAC 1 cut(s) 1515
XmnI GAANNNNTTC 1 cut(s) 602
XspI CTAG 4 cut(s) 660, 729, 1338, 1599
ZrmI AGTACT 2 cut(s) 1277, 1485
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.