Rw5G024370

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000264
Physical Location & Seq
Forward (+)
34620586 .. 34622211
1626 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G024370.1

Sequence Viewer

Length: 1626 bp
ATGGTGTTGGGAGGGTTTTCTGTTTTGGGAGACTCTGTTTTCAGTCCTCTTGAAAGCAGAGAACTAAGAGAAGTGGAGGATAGACTTGAGGAAGCGCGGAAGGGATTTCAAAATAAAAGAGGTGATCAAGGCTGGGGAGTTGCCTACACTGATTTGTGGATGAAGGAATTCATGAAAGGTGGGAGTGATTTGGAGCATGAGGCATTTCTTGTGTTCTGGTTGTCTAGGTATGTTTTTCATGATGCTCGTAACTCAGTGAACAAGGCTGTGTTTTCCATTGCAATTCGTTTAGCTAGAGGGACTCTGATTGCGCTTGCGCCTGCTGTTCTTGCAAACATTTATAGAGATTTGGGTATGTTGAAGAGGAGTATTGCAGCTTCGAATGAGTTGAAAGTGACGATCAAGTCGCCATTCCATTTGGTTCAGGTTTGGGCTTGGGAGAGATTTCTGGAACTTCGGCCAAGGCCAAATGGTATCAGAAATGCTGAGCCGAGATTGGCTCGATGGGATAAAGTACTTGGTCTAAATATTGTTGGAAACTTGAGGAGAGTTTTGGATTCGGCGGGAGAAGGTTTCTTGTGGCGCCCTTATGCCATTGCCATTGAGAACTGGAAACTTCCCAAGTATTTTGTGGAGAAGGAGAAGTGGGTAGTGGTTGGTCCCAGTTTGAATGATGATGAATTGCTGTCATTTTCGATATGCATGAGGGTGAATGAGTTGGTTGGATTTGGTACTAAACAGCAGTACCTTCCGCACCGAGTGGCTATGCAATTTGGTTACGATCAGGACATCCCAGGTTTTGTTGCTCCATTGATTCACAATACTAATATGACCTGGAAGCAGTACTTGAAAGAACTTGAGTATGTGATATTGTATATACCATCGAGGCTTTCTGAGGCGGATGCTAGCACAAGATACTTAAAGTGGTGGAAGGAATCCATGACAGGCCTCAAACACAGAAGTATGTCACCAGAAAAGAAAGCAAGGGAAGCTGTCAATGAGATATATGATGTCAGCATTCCTTGTATCCGTTCTCCAAAGAAGGCAGAAGTACTCGTGCAGGTTTCTGCAGGAAGGAATGTATACGAAGGTAATGATTCCCTTGTGCCTCCCGGATTCCCTCCAAAAAGGTATAGGCTGGAAGTTGGAGATCCTATGGATGATGATGACCTAACTATAGCAGAGGCTTTGAAAATTAGGAAGAAGCATAAAACTGTTGAAACTAGAAAAGGTAGCGACGGTGAGAAGTTATCAGCTGATCATGATCAAATCTTGGCATCTTCAATTGCAGATGAATATTCTGTTAATACTATCACATCAGAAATATTTGAGAATGACATTACATTGGGTAAAGTTGTGACTTGGGGTGATAAGGGTAAGAGGAAGCTGAGAAAGGTAAGCATCATTATTGGCAATGAATGTCCTAGTAGCACCTCTCCAGTTGAGGAACAGGAATGTGCTAGCCTCAGCTCTTCATTTGAGAGACCGGAATACGCTTGCAGCAGGTCTGTATTTGAGAAACCAGAATATGCTAGCAGCAGTTCATTTGAAAAACGGGTGTCACAACTTAAATCTAAGGTTACAATGCTTGAAAAGATAGTTGAGGTGTTAAAATCTAGGACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

541

Amino Acids

61.57

Weight (kDa)

8.76

Isoelectric Point (pI)

43.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 1 - 311 1.1e-80 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000264)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48145 AT1G50745
fragaria_vesca FvH4_3g22280 FvH4_3g22281 FvH4_3g22290 FvH4_3g22300 FvH4_3g22321 FvH4_3g22330 FvH4_3g22330 FvH4_3g22331
rosa_chinensis RchiOBHm_Chr5g0038351 RchiOBHm_Chr5g0038361 RchiOBHm_Chr5g0038371 RchiOBHm_Chr5g0038381 RchiOBHm_Chr5g0038421 RchiOBHm_Chr5g0038451 RchiOBHm_Chr5g0038471 RchiOBHm_Chr5g0038491 RchiOBHm_Chr5g0038561 RchiOBHm_Chr5g0038731 RchiOBHm_Chr5g0038741 RchiOBHm_Chr5g0038771 RchiOBHm_Chr5g0038781 RchiOBHm_Chr5g0038791 RchiOBHm_Chr5g0038801 RchiOBHm_Chr5g0038831
rosa_laevigata RLG00000008815 RLG00000020213 RLG00000033850 RLG00000033864 RLG00000033875
rosa_multiflora Rmu_co8006804.1_g000001 Rmu_co8168012.1_g000001 Rmu_co8236409.1_g000001 Rmu_co8247247.1_g000001 Rmu_co8440391.1_g000001 Rmu_sc0000533.1_g000088 Rmu_sc0003198.1_g000005 Rmu_sc0003198.1_g000006 Rmu_sc0003198.1_g000007 Rmu_sc0003198.1_g000008 Rmu_sc0003198.1_g000013 Rmu_sc0005722.1_g000005 Rmu_sc0005722.1_g000007 Rmu_sc0005722.1_g000012 Rmu_sc0005722.1_g000013 Rmu_sc0005836.1_g000001 Rmu_sc0009149.1_g000006 Rmu_sc0009149.1_g000018 Rmu_sc0009149.1_g000020 Rmu_sc0017397.1_g000004 Rmu_sc0025071.1_g000001 Rmu_sc0032545.1_g000001 Rmu_sc0038346.1_g000001
rosa_roxburghii Rroxscaffold_1G00042150 Rroxscaffold_1G00042180 Rroxscaffold_1G00042230 Rroxscaffold_1G00042240 Rroxscaffold_1G00042260 Rroxscaffold_1G00042320 Rroxscaffold_1G00042330 Rroxscaffold_1G00042350 Rroxscaffold_1G00042360 Rroxscaffold_1G00042370 Rroxscaffold_1G00042400 Rroxscaffold_1G00042430 Rroxscaffold_1G00042440 Rroxscaffold_1G00042510 Rroxscaffold_1G00042580 Rroxscaffold_1G00042620
rosa_rugosa Rorug05G0172200 Rorug05G0172300 Rorug05G0172500 Rorug05G0173100 Rorug05G0173200.1 Rorug05G0173600 Rorug05G0173800 Rorug05G0174000 Rorug05G0174100 Rorug05G0174200 Rorug05G0174200 Rorug05G0174400 Rorug05G0174500 Rorug05G0174600 Rorug05G0174700 Rorug05G0174800
rosa_samantha Rh5AG259600 Rh5AG260200 Rh5AG260600 Rh5AG260800 Rh5AG261300 Rh5AG261400 Rh5AG261500 Rh5AG261700 Rh5AG261900 Rh5BG263600 Rh5BG264200 Rh5BG264500 Rh5BG264800 Rh5BG265100 Rh5BG265200 Rh5BG265500 Rh5BG265600 Rh5BG266000 Rh5CG295900 Rh5CG296700 Rh5CG296800 Rh5CG296900 Rh5CG297200 Rh5CG297700 Rh5CG297900 Rh5CG298100 Rh5CG298200 Rh5CG298300 Rh5CG298400 Rh5CG298500 Rh5CG298900 Rh5CG299200 Rh6DG125700
rosa_wichuraiana Rw0G001950 Rw0G001960 Rw0G013290 Rw5G024020 Rw5G024310 Rw5G024340 Rw5G024350 Rw5G024370 Rw5G024380 Rw5G024390 Rw5G024400 Rw5G024420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 403
Acc36I ACCTGC 2 cut(s) 1051, 1494
AccB1I GGYRCC 1 cut(s) 582
AccI GTMKAC 1 cut(s) 1083
AccII CGCG 1 cut(s) 97
AciI CCGC 4 cut(s) 97, 563, 752, 899
AclWI GGATC 1 cut(s) 1145
AcoI YGGCCR 1 cut(s) 458
AcsI RAATTY 1 cut(s) 167
AcyI GRCGYC 1 cut(s) 583
AdeI CACNNNGTG 1 cut(s) 760
AfaI GTAC 5 cut(s) 516, 733, 746, 845, 1053
AjnI CCWGG 2 cut(s) 793, 833
AluBI AGCT 6 cut(s) 293, 377, 992, 1256, 1387, 1470
AluI AGCT 6 cut(s) 293, 377, 992, 1256, 1387, 1470
Alw26I GTCTC 2 cut(s) 24, 1477
AlwI GGATC 1 cut(s) 1145
AoxI GGCC 3 cut(s) 458, 464, 946
ApeKI GCWGC 3 cut(s) 374, 1500, 1536
ApoI RAATTY 1 cut(s) 167
Asp700I GAANNNNTTC 1 cut(s) 167
AspLEI GCGC 4 cut(s) 97, 313, 319, 585
AspS9I GGNCC 1 cut(s) 659
AsuC2I CCSGG 1 cut(s) 1113
AsuHPI GGTGA 5 cut(s) 134, 721, 960, 1253, 1379
AsuII TTCGAA 1 cut(s) 380
AsuNHI GCTAGC 3 cut(s) 905, 1460, 1532
AvaII GGWCC 1 cut(s) 659
BaeI ACNNNNGTAYC 2 cut(s) 728, 761
BanI GGYRCC 1 cut(s) 582
BarI GAAGNNNNNNTAC 2 cut(s) 361, 393
BauI CACGAG 1 cut(s) 1055
BbvCI CCTCAGC 1 cut(s) 1466
BbvI GCAGC 3 cut(s) 386, 1512, 1548
BccI CCATC 2 cut(s) 498, 889
BciT130I CCWGG 2 cut(s) 795, 835
BciVI GTATCC 1 cut(s) 1037
BclI TGATCA 3 cut(s) 124, 1258, 1264
BcnI CCSGG 1 cut(s) 1113
BcoDI GTCTC 2 cut(s) 24, 1477
BfaI CTAG 8 cut(s) 225, 294, 906, 1224, 1425, 1461, 1533, 1617
BfmI CTRYAG 2 cut(s) 1068, 1176
BfoI RGCGCY 1 cut(s) 586
BfuAI ACCTGC 2 cut(s) 1051, 1494
BfuI GTATCC 1 cut(s) 1037
BisI GCNGC 3 cut(s) 375, 1501, 1537
BlpI GCTNAGC 1 cut(s) 486
BlsI GCNGC 3 cut(s) 376, 1502, 1538
BmcAI AGTACT 3 cut(s) 516, 845, 1053
Bme1390I CCNGG 3 cut(s) 795, 835, 1113
Bme18I GGWCC 1 cut(s) 659
BmgT120I GGNCC 1 cut(s) 659
BmiI GGNNCC 2 cut(s) 584, 661
BmrFI CCNGG 3 cut(s) 795, 835, 1113
BmrI ACTGGG 1 cut(s) 657
BmsI GCATC 4 cut(s) 232, 892, 1286, 1410
BmtI GCTAGC 3 cut(s) 909, 1464, 1536
BmuI ACTGGG 1 cut(s) 657
BplI GAGNNNNNCTC 2 cut(s) 484, 516
BpmI CTGGAG 1 cut(s) 1422
Bpu10I CCTNAGC 1 cut(s) 1466
Bpu1102I GCTNAGC 1 cut(s) 486
Bpu14I TTCGAA 1 cut(s) 380
BpuEI CTTGAG 3 cut(s) 107, 562, 878
BpuMI CCSGG 1 cut(s) 1113
BsaBI GATNNNNATC 1 cut(s) 1263
BsaHI GRCGYC 1 cut(s) 583
BsaI GGTCTC 1 cut(s) 1477
BsaJI CCNNGG 2 cut(s) 461, 793
BsaWI WCCGGW 1 cut(s) 1486
BsaXI ACNNNNNCTCC 2 cut(s) 21, 51
Bse1I ACTGG 3 cut(s) 614, 663, 1439
Bse3DI GCAATG 3 cut(s) 276, 594, 1420
Bse8I GATNNNNATC 1 cut(s) 1263
BseBI CCWGG 2 cut(s) 795, 835
BseDI CCNNGG 2 cut(s) 461, 793
BseGI GGATG 4 cut(s) 165, 789, 907, 1165
BseJI GATNNNNATC 1 cut(s) 1263
BseMI GCAATG 3 cut(s) 276, 594, 1420
BseMII CTCAG 5 cut(s) 267, 477, 885, 1379, 1480
BseNI ACTGG 3 cut(s) 614, 663, 1439
BseRI GAGGAG 2 cut(s) 379, 559
BseXI GCAGC 3 cut(s) 386, 1512, 1548
BseYI CCCAGC 1 cut(s) 132
BsgI GTGCAG 1 cut(s) 1079
Bsh1236I CGCG 1 cut(s) 97
BshFI GGCC 3 cut(s) 460, 466, 948
BshNI GGYRCC 1 cut(s) 582
BsiSI CCGG 2 cut(s) 1113, 1487
BslFI GGGAC 2 cut(s) 313, 645
BsmAI GTCTC 2 cut(s) 24, 1477
BsmFI GGGAC 2 cut(s) 313, 645
BsmI GAATGC 1 cut(s) 1017
BsnI GGCC 3 cut(s) 460, 466, 948
Bso31I GGTCTC 1 cut(s) 1477
Bsp119I TTCGAA 1 cut(s) 380
Bsp143I GATC 6 cut(s) 124, 399, 781, 1150, 1258, 1264
Bsp1720I GCTNAGC 1 cut(s) 486
BspACI CCGC 4 cut(s) 97, 563, 752, 899
BspANI GGCC 3 cut(s) 460, 466, 948
BspCNI CTCAG 5 cut(s) 266, 478, 886, 1380, 1479
BspFNI CGCG 1 cut(s) 97
BspHI TCATGA 3 cut(s) 171, 238, 1261
BspLI GGNNCC 2 cut(s) 584, 661
BspMAI CTGCAG 1 cut(s) 1072
BspMI ACCTGC 2 cut(s) 1051, 1494
BspOI GCTAGC 3 cut(s) 909, 1464, 1536
BspPI GGATC 1 cut(s) 1145
BspQI GCTCTTC 1 cut(s) 1477
BspT104I TTCGAA 1 cut(s) 380
BspT107I GGYRCC 1 cut(s) 582
BspTNI GGTCTC 1 cut(s) 1477
BsrDI GCAATG 3 cut(s) 276, 594, 1420
BsrI ACTGG 3 cut(s) 614, 663, 1439
BssECI CCNNGG 2 cut(s) 461, 793
BssMI GATC 6 cut(s) 124, 399, 781, 1150, 1258, 1264
BssNAI GTATAC 1 cut(s) 1084
BssNI GRCGYC 1 cut(s) 583
BssSI CACGAG 1 cut(s) 1055
BssT1I CCWWGG 1 cut(s) 461
Bst1107I GTATAC 1 cut(s) 1084
Bst2BI CACGAG 1 cut(s) 1055
Bst2UI CCWGG 2 cut(s) 795, 835
Bst4CI ACNGT 2 cut(s) 1216, 1241
Bst6I CTCTTC 2 cut(s) 356, 1477
BstACI GRCGYC 1 cut(s) 583
BstBI TTCGAA 1 cut(s) 380
BstC8I GCNNGC 6 cut(s) 315, 321, 907, 1462, 1498, 1534
BstDEI CTNAG 7 cut(s) 65, 253, 486, 894, 1388, 1466, 1575
BstF5I GGATG 4 cut(s) 165, 789, 907, 1165
BstFNI CGCG 1 cut(s) 97
BstH2I RGCGCY 1 cut(s) 586
BstHHI GCGC 4 cut(s) 97, 313, 319, 585
BstKTI GATC 6 cut(s) 127, 402, 784, 1153, 1261, 1267
BstMAI GTCTC 2 cut(s) 24, 1477
BstMBI GATC 6 cut(s) 124, 399, 781, 1150, 1258, 1264
BstMWI GCNNNNNNNGC 2 cut(s) 329, 989
BstNI CCWGG 2 cut(s) 795, 835
BstSCI CCNGG 3 cut(s) 793, 833, 1111
BstSFI CTRYAG 2 cut(s) 1068, 1176
BstUI CGCG 1 cut(s) 97
BstV1I GCAGC 3 cut(s) 386, 1512, 1548
BstX2I RGATCY 1 cut(s) 1150
BstYI RGATCY 1 cut(s) 1150
BstZ17I GTATAC 1 cut(s) 1084
BsuI GTATCC 1 cut(s) 1037
BsuRI GGCC 3 cut(s) 460, 466, 948
BtsCI GGATG 4 cut(s) 165, 789, 907, 1165
BtsIMutI CAGTG 2 cut(s) 147, 261
BveI ACCTGC 2 cut(s) 1051, 1494
Cac8I GCNNGC 6 cut(s) 315, 321, 907, 1462, 1498, 1534
CciI TCATGA 3 cut(s) 171, 238, 1261
CfoI GCGC 4 cut(s) 97, 313, 319, 585
Cfr13I GGNCC 1 cut(s) 659
Csp6I GTAC 5 cut(s) 515, 732, 745, 844, 1052
CviAII CATG 6 cut(s) 172, 197, 239, 703, 940, 1262
CviQI GTAC 5 cut(s) 515, 732, 745, 844, 1052
DdeI CTNAG 7 cut(s) 65, 253, 486, 894, 1388, 1466, 1575
DinI GGCGCC 1 cut(s) 584
DpnI GATC 6 cut(s) 126, 401, 783, 1152, 1260, 1266
DpnII GATC 6 cut(s) 124, 399, 781, 1150, 1258, 1264
DraIII CACNNNGTG 1 cut(s) 760
DrdI GACNNNNNNGTC 1 cut(s) 403
DseDI GACNNNNNNGTC 1 cut(s) 403
EaeI YGGCCR 1 cut(s) 458
Eam1104I CTCTTC 2 cut(s) 356, 1477
EarI CTCTTC 2 cut(s) 356, 1477
EciI GGCGGA 1 cut(s) 914
Eco130I CCWWGG 1 cut(s) 461
Eco147I AGGCCT 1 cut(s) 948
Eco31I GGTCTC 1 cut(s) 1477
Eco47I GGWCC 1 cut(s) 659
EcoRI GAATTC 1 cut(s) 167
EcoRII CCWGG 2 cut(s) 793, 833
EcoT14I CCWWGG 1 cut(s) 461
EcoT22I ATGCAT 1 cut(s) 704
EgeI GGCGCC 1 cut(s) 584
EheI GGCGCC 1 cut(s) 584
ErhI CCWWGG 1 cut(s) 461
FaeI CATG 6 cut(s) 175, 200, 242, 706, 943, 1265
FalI AAGNNNNNCTT 2 cut(s) 830, 862
FaqI GGGAC 2 cut(s) 313, 645
FatI CATG 6 cut(s) 171, 196, 238, 702, 939, 1261
FauI CCCGC 1 cut(s) 556
FbaI TGATCA 3 cut(s) 124, 1258, 1264
FblI GTMKAC 1 cut(s) 1083
Fnu4HI GCNGC 3 cut(s) 375, 1501, 1537
FokI GGATG 4 cut(s) 172, 776, 914, 1172
Fsp4HI GCNGC 3 cut(s) 375, 1501, 1537
FspBI CTAG 8 cut(s) 225, 294, 906, 1224, 1425, 1461, 1533, 1617
GlaI GCGC 4 cut(s) 96, 312, 318, 584
GluI GCNGC 3 cut(s) 375, 1501, 1537
GsaI CCCAGC 1 cut(s) 136
GsuI CTGGAG 1 cut(s) 1422
HaeII RGCGCY 1 cut(s) 586
HaeIII GGCC 3 cut(s) 460, 466, 948
HapII CCGG 2 cut(s) 1113, 1487
HhaI GCGC 4 cut(s) 97, 313, 319, 585
Hin1I GRCGYC 1 cut(s) 583
Hin1II CATG 6 cut(s) 175, 200, 242, 706, 943, 1265
Hin6I GCGC 4 cut(s) 95, 311, 317, 583
HinP1I GCGC 4 cut(s) 95, 311, 317, 583
HinfI GANTC 7 cut(s) 32, 301, 557, 814, 935, 1097, 1116
HpaII CCGG 2 cut(s) 1113, 1487
HphI GGTGA 5 cut(s) 134, 721, 960, 1253, 1379
Hpy166II GTNNAC 2 cut(s) 259, 1084
Hpy188I TCNGA 4 cut(s) 306, 479, 895, 1321
Hpy188III TCNNGA 6 cut(s) 50, 172, 239, 449, 785, 1262
Hpy8I GTNNAC 2 cut(s) 259, 1084
Hpy99I CGWCG 1 cut(s) 1241
HpyAV CCTTC 9 cut(s) 94, 157, 563, 631, 758, 925, 1036, 1068, 1082
HpyCH4III ACNGT 2 cut(s) 1216, 1241
HpyCH4V TGCA 9 cut(s) 281, 332, 374, 702, 769, 1060, 1070, 1289, 1500
HpyF10VI GCNNNNNNNGC 2 cut(s) 329, 989
HpyF3I CTNAG 7 cut(s) 65, 253, 486, 894, 1388, 1466, 1575
Hsp92I GRCGYC 1 cut(s) 583
Hsp92II CATG 6 cut(s) 175, 200, 242, 706, 943, 1265
HspAI GCGC 4 cut(s) 95, 311, 317, 583
KasI GGCGCC 1 cut(s) 582
Ksp22I TGATCA 3 cut(s) 124, 1258, 1264
Kzo9I GATC 6 cut(s) 124, 399, 781, 1150, 1258, 1264
LguI GCTCTTC 1 cut(s) 1477
LmnI GCTCC 2 cut(s) 193, 811
Lsp1109I GCAGC 3 cut(s) 386, 1512, 1548
LweI GCATC 4 cut(s) 232, 892, 1286, 1410
MaeI CTAG 8 cut(s) 225, 294, 906, 1224, 1425, 1461, 1533, 1617
MaeIII GTNAC 7 cut(s) 248, 394, 776, 966, 1357, 1560, 1579
MalI GATC 6 cut(s) 126, 401, 783, 1152, 1260, 1266
MboI GATC 6 cut(s) 124, 399, 781, 1150, 1258, 1264
MboII GAAGA 4 cut(s) 373, 1213, 1272, 1464
MfeI CAATTG 1 cut(s) 1284
MflI RGATCY 1 cut(s) 1150
MluCI AATT 6 cut(s) 167, 282, 680, 770, 1194, 1284
Mly113I GGCGCC 1 cut(s) 583
MlyI GAGTC 2 cut(s) 26, 295
MmeI TCCRAC 3 cut(s) 514, 703, 1126
Mph1103I ATGCAT 1 cut(s) 704
MroXI GAANNNNTTC 1 cut(s) 167
MseI TTAA 4 cut(s) 920, 1305, 1569, 1610
MslI CAYNNNNRTG 1 cut(s) 707
MspA1I CMGCKG 1 cut(s) 1256
MspI CCGG 2 cut(s) 1113, 1487
MspR9I CCNGG 3 cut(s) 795, 835, 1113
MunI CAATTG 1 cut(s) 1284
Mva1269I GAATGC 1 cut(s) 1017
MvaI CCWGG 2 cut(s) 795, 835
MvnI CGCG 1 cut(s) 97
MwoI GCNNNNNNNGC 2 cut(s) 329, 989
NarI GGCGCC 1 cut(s) 583
NciI CCSGG 1 cut(s) 1113
NdeII GATC 6 cut(s) 124, 399, 781, 1150, 1258, 1264
NheI GCTAGC 3 cut(s) 905, 1460, 1532
NlaIII CATG 6 cut(s) 175, 200, 242, 706, 943, 1265
NlaIV GGNNCC 2 cut(s) 584, 661
NmeAIII GCCGAG 1 cut(s) 516
NmuCI GTSAC 4 cut(s) 394, 966, 1357, 1560
NsiI ATGCAT 1 cut(s) 704
NspV TTCGAA 1 cut(s) 380
PagI TCATGA 3 cut(s) 171, 238, 1261
PceI AGGCCT 1 cut(s) 948
PciSI GCTCTTC 1 cut(s) 1477
PctI GAATGC 1 cut(s) 1017
PdmI GAANNNNTTC 1 cut(s) 167
PfeI GAWTC 5 cut(s) 557, 814, 935, 1097, 1116
PfoI TCCNGGA 1 cut(s) 1111
PkrI GCNGC 3 cut(s) 376, 1502, 1538
PleI GAGTC 2 cut(s) 26, 295
PluTI GGCGCC 1 cut(s) 586
PpsI GAGTC 2 cut(s) 26, 295
Psp6I CCWGG 2 cut(s) 793, 833
PspFI CCCAGC 1 cut(s) 132
PspGI CCWGG 2 cut(s) 793, 833
PspN4I GGNNCC 2 cut(s) 584, 661
PspPI GGNCC 1 cut(s) 659
PstI CTGCAG 1 cut(s) 1072
PsuI RGATCY 1 cut(s) 1150
PvuII CAGCTG 1 cut(s) 1256
RsaI GTAC 5 cut(s) 516, 733, 746, 845, 1053
RsaNI GTAC 5 cut(s) 515, 732, 745, 844, 1052
RseI CAYNNNNRTG 1 cut(s) 707
SapI GCTCTTC 1 cut(s) 1477
SaqAI TTAA 4 cut(s) 920, 1305, 1569, 1610
SatI GCNGC 3 cut(s) 375, 1501, 1537
Sau3AI GATC 6 cut(s) 124, 399, 781, 1150, 1258, 1264
Sau96I GGNCC 1 cut(s) 659
ScaI AGTACT 3 cut(s) 516, 845, 1053
SchI GAGTC 2 cut(s) 26, 295
ScrFI CCNGG 3 cut(s) 795, 835, 1113
SfaNI GCATC 4 cut(s) 232, 892, 1286, 1410
SfcI CTRYAG 2 cut(s) 1068, 1176
SfoI GGCGCC 1 cut(s) 584
SfuI TTCGAA 1 cut(s) 380
SinI GGWCC 1 cut(s) 659
SmiMI CAYNNNNRTG 1 cut(s) 707
SmlI CTYRAG 3 cut(s) 86, 541, 857
SmoI CTYRAG 3 cut(s) 86, 541, 857
Sse9I AATT 6 cut(s) 167, 282, 680, 770, 1194, 1284
SseBI AGGCCT 1 cut(s) 948
SsiI CCGC 4 cut(s) 97, 563, 752, 899
SspDI GGCGCC 1 cut(s) 582
SspI AATATT 3 cut(s) 529, 1298, 1326
SspMI CTAG 8 cut(s) 225, 294, 906, 1224, 1425, 1461, 1533, 1617
StuI AGGCCT 1 cut(s) 948
StyD4I CCNGG 3 cut(s) 793, 833, 1111
StyI CCWWGG 1 cut(s) 461
TaaI ACNGT 2 cut(s) 1216, 1241
TaqI TCGA 4 cut(s) 380, 502, 695, 884
TasI AATT 6 cut(s) 167, 282, 680, 770, 1194, 1284
TatI WGTACW 3 cut(s) 514, 843, 1051
TfiI GAWTC 5 cut(s) 557, 814, 935, 1097, 1116
Tru1I TTAA 4 cut(s) 920, 1305, 1569, 1610
Tru9I TTAA 4 cut(s) 920, 1305, 1569, 1610
TscAI CASTG 2 cut(s) 154, 261
TseFI GTSAC 4 cut(s) 394, 966, 1357, 1560
TseI GCWGC 3 cut(s) 374, 1500, 1536
Tsp45I GTSAC 4 cut(s) 394, 966, 1357, 1560
TspDTI ATGAA 9 cut(s) 160, 176, 188, 227, 693, 1308, 1431, 1464, 1533
TspGWI ACGGA 1 cut(s) 1019
TspRI CASTG 2 cut(s) 154, 261
VpaK11BI GGWCC 1 cut(s) 659
XapI RAATTY 1 cut(s) 167
XcmI CCANNNNNNNNNTGG 1 cut(s) 628
XmiI GTMKAC 1 cut(s) 1083
XmnI GAANNNNTTC 1 cut(s) 167
XspI CTAG 8 cut(s) 225, 294, 906, 1224, 1425, 1461, 1533, 1617
ZrmI AGTACT 3 cut(s) 516, 845, 1053
Zsp2I ATGCAT 1 cut(s) 704
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.