Rh5BG264800

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0000264
Physical Location & Seq
Forward (+)
33155178 .. 33156980
1803 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG264800.1

Sequence Viewer

Length: 1803 bp
ATGATCGAAGCCGTGGAGCATTCCCCTCAGTCCAAAAGGCCAAAACTTTCTTTCTGTTCTAGCTACAACCAAACTACACCGGAAACCATGATTGAAGAGAAACAAGACCTCATGATTTCACCAACTGGCGGAGACCCATTTCACAAAACAGCAGCCCACTTCCTCAAACCCACTTCACCTTCCTCCATTGATGAACCTTTTCTCAAGCTCCCTGATTCCTTCTCCTCCCTCCCTCCACATTTTGACCCTACAAGTTGGAATTTGAAAGTTGAATTCCCTGGATGGCAACACGGTCAGAAAGAATGGAAAGCTTGGGTTGATCAATTGGCTCCACTTCACCAATCTACATGGAAGAAAGCTGGTATCTATGAACCCATCTTCAATTCCACGTACGAAATAAGAAGAAACAATGATTTAGTATATGCGCTTGCAGAGAAATGGTGCTCTGAAACCAACACCTTCATTTTTCCATGGGGTGAAACCACAATCACATTGGAGGATGTTATGGTTTTGGGAGACTCTATTTTCAGTCCTATTCAAACCAGAGAAGTGAAAGAAATAGAAGACAAACTTGAGAAAGAGCGAGGGGAAATTATTAGAAGATGTAAGAAGGCCCAGACAAGCACGTGGTTCCAGAAGTTCATCAACAGTGGGAGTGAATTCGAGCACGAAGCATTTCTTGCCTATTGGCTGTCCAGGTATGTTTTCAACAGTCGAACGGTTTATAGGCATGTTTTATCGATTGCAATTCGTATAGCTAGGGGAACGAAAATTTCGCTTGCACCATCTGTTCTTGCCAGCATTGATAAAGATTTGGGCTTACTGGGAAGTGCAATTGTAGATTTAAGTAAACTAACGAGTAGTGATGATACTATAGAATTGAACCTCAGGTCAGCATTGCAGTTTGTTCAAGTTTGGGCATGGGAAAGAGTGTTGGAACTTAGTCCATTGGCCAATGTTGTCAATAATGCTGAGCCAAGATTGGCTCGATGGGATAGAGTGAATGGTTTAAGTGTGAAAGATTTGAGGAGGGTTTTAGACTCTGCCGGAGAGGATTTCATGTGGCGCCCTTATGCCATGGCCATTGAGAACTCAAATTTTCCAAAATACTATTTGGAAAAGGAAAAGTGGGTTGGTCCTGGTTTGGATGATGAGTTCCTGTCATTTGCCATATGCTTGAGGGCGACTGAGTTAAACGGAATTGGTACTGCAGAGCAATACCTTCCGCATAGGGTAGCTAGGCAGTTTGGATTTGATCAAGACATTCCTGGTTTTGTTGCTCGAGCCGATGATGATTCTGATATTCTCTCTGGAAAAGAAATCCCTCATATAGCCTGGAAACATCACATCAGGGAGATTAAGAAGCTAAAATTGTATATCCCATCTAGGCTTTCGGAGGCAGATGTGAGCACAAGATACATGAAATGGTGGGAGGAAACAGTATCAGGTCTCAAACACATCACTGAGCCTGGGATGCCACAAAAGAAGAAAGCAAATACTACTGAGGGATCACTACTGACGGATAAACATGTTCCAATGCATCCTGGTTTTCCACGCAAGAAAGTTGCTGGGTCAAAGGAAAGGATAAGAATTGCTGATTTCACCATTCCTTCTGTTTCAAATGGTAGCAATGAAGGTAATGATTCTCTTGTTCCTCCAGGATTTTCTCCCACAAGTAATAGGATGAAAGCAGGATATCCTATGTATCAAACATATATGAATAATTCTTCTGTATATTTGTTCTTCTCCCTGAGGAGGTCTATATATACAGCTATATTTGAATACAATATGAAAGACAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

600

Amino Acids

68.67

Weight (kDa)

6.76

Isoelectric Point (pI)

45.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 121 - 478 1.9e-97 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000264)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48145 AT1G50745
fragaria_vesca FvH4_3g22280 FvH4_3g22281 FvH4_3g22290 FvH4_3g22300 FvH4_3g22321 FvH4_3g22330 FvH4_3g22330 FvH4_3g22331
rosa_chinensis RchiOBHm_Chr5g0038351 RchiOBHm_Chr5g0038361 RchiOBHm_Chr5g0038371 RchiOBHm_Chr5g0038381 RchiOBHm_Chr5g0038421 RchiOBHm_Chr5g0038451 RchiOBHm_Chr5g0038471 RchiOBHm_Chr5g0038491 RchiOBHm_Chr5g0038561 RchiOBHm_Chr5g0038731 RchiOBHm_Chr5g0038741 RchiOBHm_Chr5g0038771 RchiOBHm_Chr5g0038781 RchiOBHm_Chr5g0038791 RchiOBHm_Chr5g0038801 RchiOBHm_Chr5g0038831
rosa_laevigata RLG00000008815 RLG00000020213 RLG00000033850 RLG00000033864 RLG00000033875
rosa_multiflora Rmu_co8006804.1_g000001 Rmu_co8168012.1_g000001 Rmu_co8236409.1_g000001 Rmu_co8247247.1_g000001 Rmu_co8440391.1_g000001 Rmu_sc0000533.1_g000088 Rmu_sc0003198.1_g000005 Rmu_sc0003198.1_g000006 Rmu_sc0003198.1_g000007 Rmu_sc0003198.1_g000008 Rmu_sc0003198.1_g000013 Rmu_sc0005722.1_g000005 Rmu_sc0005722.1_g000007 Rmu_sc0005722.1_g000012 Rmu_sc0005722.1_g000013 Rmu_sc0005836.1_g000001 Rmu_sc0009149.1_g000006 Rmu_sc0009149.1_g000018 Rmu_sc0009149.1_g000020 Rmu_sc0017397.1_g000004 Rmu_sc0025071.1_g000001 Rmu_sc0032545.1_g000001 Rmu_sc0038346.1_g000001
rosa_roxburghii Rroxscaffold_1G00042150 Rroxscaffold_1G00042180 Rroxscaffold_1G00042230 Rroxscaffold_1G00042240 Rroxscaffold_1G00042260 Rroxscaffold_1G00042320 Rroxscaffold_1G00042330 Rroxscaffold_1G00042350 Rroxscaffold_1G00042360 Rroxscaffold_1G00042370 Rroxscaffold_1G00042400 Rroxscaffold_1G00042430 Rroxscaffold_1G00042440 Rroxscaffold_1G00042510 Rroxscaffold_1G00042580 Rroxscaffold_1G00042620
rosa_rugosa Rorug05G0172200 Rorug05G0172300 Rorug05G0172500 Rorug05G0173100 Rorug05G0173200.1 Rorug05G0173600 Rorug05G0173800 Rorug05G0174000 Rorug05G0174100 Rorug05G0174200 Rorug05G0174200 Rorug05G0174400 Rorug05G0174500 Rorug05G0174600 Rorug05G0174700 Rorug05G0174800
rosa_samantha Rh5AG259600 Rh5AG260200 Rh5AG260600 Rh5AG260800 Rh5AG261300 Rh5AG261400 Rh5AG261500 Rh5AG261700 Rh5AG261900 Rh5BG263600 Rh5BG264200 Rh5BG264500 Rh5BG264800 Rh5BG265100 Rh5BG265200 Rh5BG265500 Rh5BG265600 Rh5BG266000 Rh5CG295900 Rh5CG296700 Rh5CG296800 Rh5CG296900 Rh5CG297200 Rh5CG297700 Rh5CG297900 Rh5CG298100 Rh5CG298200 Rh5CG298300 Rh5CG298400 Rh5CG298500 Rh5CG298900 Rh5CG299200 Rh6DG125700
rosa_wichuraiana Rw0G001950 Rw0G001960 Rw0G013290 Rw5G024020 Rw5G024310 Rw5G024340 Rw5G024350 Rw5G024370 Rw5G024380 Rw5G024390 Rw5G024400 Rw5G024420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1065
AciI CCGC 2 cut(s) 129, 1226
AclWI GGATC 1 cut(s) 1516
AcoI YGGCCR 2 cut(s) 951, 1080
AcsI RAATTY 5 cut(s) 259, 272, 659, 771, 1096
AcvI CACGTG 1 cut(s) 627
AcyI GRCGYC 1 cut(s) 1066
AfaI GTAC 2 cut(s) 392, 1207
AfiI CCNNNNNNNGG 2 cut(s) 128, 1755
AflIII ACRYGT 1 cut(s) 1528
AjnI CCWGG 8 cut(s) 277, 695, 1138, 1267, 1334, 1468, 1543, 1657
AjuI GAANNNNNNNTTGG 2 cut(s) 1116, 1148
AloI GAACNNNNNNTCC 2 cut(s) 1139, 1171
AluBI AGCT 8 cut(s) 63, 208, 311, 359, 758, 1238, 1366, 1772
AluI AGCT 8 cut(s) 63, 208, 311, 359, 758, 1238, 1366, 1772
Alw21I GWGCWC 3 cut(s) 446, 669, 1412
Alw26I GTCTC 3 cut(s) 126, 510, 1454
AlwI GGATC 1 cut(s) 1516
Ama87I CYCGRG 1 cut(s) 1281
AoxI GGCC 4 cut(s) 38, 612, 951, 1080
ApeKI GCWGC 1 cut(s) 152
ApoI RAATTY 5 cut(s) 259, 272, 659, 771, 1096
Asp700I GAANNNNTTC 2 cut(s) 198, 675
AspLEI GCGC 2 cut(s) 427, 1068
AspS9I GGNCC 2 cut(s) 613, 1136
AsuHPI GGTGA 5 cut(s) 111, 168, 329, 488, 1594
AvaI CYCGRG 1 cut(s) 1281
AvaII GGWCC 1 cut(s) 1136
AxyI CCTNAGG 2 cut(s) 887, 1751
BalI TGGCCA 2 cut(s) 953, 1082
BanI GGYRCC 1 cut(s) 1065
BbrPI CACGTG 1 cut(s) 627
BbsI GAAGAC 1 cut(s) 570
Bbv12I GWGCWC 3 cut(s) 446, 669, 1412
BbvI GCAGC 1 cut(s) 164
BccI CCATC 5 cut(s) 276, 383, 793, 984, 1390
BciT130I CCWGG 8 cut(s) 279, 697, 1140, 1269, 1336, 1470, 1545, 1659
BclI TGATCA 2 cut(s) 319, 1255
BcoDI GTCTC 3 cut(s) 126, 510, 1454
BfaI CTAG 4 cut(s) 60, 759, 1239, 1386
BfmI CTRYAG 2 cut(s) 873, 1209
BfoI RGCGCY 1 cut(s) 1069
BisI GCNGC 1 cut(s) 153
BlpI GCTNAGC 1 cut(s) 972
BlsI GCNGC 1 cut(s) 154
Bme1390I CCNGG 8 cut(s) 279, 697, 1140, 1269, 1336, 1470, 1545, 1659
Bme18I GGWCC 1 cut(s) 1136
BmeT110I CYCGRG 1 cut(s) 1281
BmgT120I GGNCC 2 cut(s) 613, 1136
BmiI GGNNCC 3 cut(s) 330, 632, 1067
BmrFI CCNGG 8 cut(s) 279, 697, 1140, 1269, 1336, 1470, 1545, 1659
BmrI ACTGGG 1 cut(s) 833
BmsI GCATC 2 cut(s) 1464, 1549
BmuI ACTGGG 1 cut(s) 833
BpiI GAAGAC 1 cut(s) 570
BpmI CTGGAG 1 cut(s) 1641
Bpu1102I GCTNAGC 1 cut(s) 972
BpuEI CTTGAG 3 cut(s) 188, 593, 1198
Bsa29I ATCGAT 1 cut(s) 740
BsaAI YACGTR 2 cut(s) 390, 627
BsaHI GRCGYC 1 cut(s) 1066
BsaI GGTCTC 2 cut(s) 126, 1454
BsaJI CCNNGG 5 cut(s) 12, 277, 470, 1077, 1469
BsaWI WCCGGW 1 cut(s) 79
Bsc4I CCNNNNNNNGG 2 cut(s) 128, 1755
Bse1I ACTGG 2 cut(s) 130, 828
Bse21I CCTNAGG 2 cut(s) 887, 1751
Bse3DI GCAATG 2 cut(s) 896, 1636
BseBI CCWGG 8 cut(s) 279, 697, 1140, 1269, 1336, 1470, 1545, 1659
BseCI ATCGAT 1 cut(s) 740
BseDI CCNNGG 5 cut(s) 12, 277, 470, 1077, 1469
BseGI GGATG 6 cut(s) 287, 505, 1153, 1479, 1540, 1689
BseLI CCNNNNNNNGG 2 cut(s) 128, 1755
BseMI GCAATG 2 cut(s) 896, 1636
BseMII CTCAG 7 cut(s) 41, 901, 963, 1179, 1455, 1494, 1742
BseNI ACTGG 2 cut(s) 130, 828
BseRI GAGGAG 3 cut(s) 214, 1042, 1768
BseXI GCAGC 1 cut(s) 164
BseYI CCCAGC 1 cut(s) 1568
BshFI GGCC 4 cut(s) 40, 614, 953, 1082
BshNI GGYRCC 1 cut(s) 1065
BshVI ATCGAT 1 cut(s) 740
BsiHKAI GWGCWC 3 cut(s) 446, 669, 1412
BsiHKCI CYCGRG 1 cut(s) 1281
BsiSI CCGG 2 cut(s) 80, 1047
BsiWI CGTACG 1 cut(s) 390
BslI CCNNNNNNNGG 2 cut(s) 128, 1755
BsmAI GTCTC 3 cut(s) 126, 510, 1454
BsmI GAATGC 1 cut(s) 19
BsnI GGCC 4 cut(s) 40, 614, 953, 1082
Bso31I GGTCTC 2 cut(s) 126, 1454
BsoBI CYCGRG 1 cut(s) 1281
Bsp1286I GDGCHC 3 cut(s) 446, 669, 1412
Bsp143I GATC 4 cut(s) 3, 319, 1255, 1508
Bsp1720I GCTNAGC 1 cut(s) 972
Bsp19I CCATGG 2 cut(s) 470, 1077
BspACI CCGC 2 cut(s) 129, 1226
BspANI GGCC 4 cut(s) 40, 614, 953, 1082
BspCNI CTCAG 7 cut(s) 40, 900, 964, 1180, 1456, 1495, 1743
BspDI ATCGAT 1 cut(s) 740
BspHI TCATGA 1 cut(s) 111
BspLI GGNNCC 3 cut(s) 330, 632, 1067
BspMAI CTGCAG 1 cut(s) 1213
BspPI GGATC 1 cut(s) 1516
BspT107I GGYRCC 1 cut(s) 1065
BspTNI GGTCTC 2 cut(s) 126, 1454
BsrDI GCAATG 2 cut(s) 896, 1636
BsrI ACTGG 2 cut(s) 130, 828
BssECI CCNNGG 5 cut(s) 12, 277, 470, 1077, 1469
BssMI GATC 4 cut(s) 3, 319, 1255, 1508
BssNI GRCGYC 1 cut(s) 1066
BssT1I CCWWGG 2 cut(s) 470, 1077
Bst2UI CCWGG 8 cut(s) 279, 697, 1140, 1269, 1336, 1470, 1545, 1659
Bst4CI ACNGT 5 cut(s) 293, 650, 713, 721, 1441
Bst6I CTCTTC 1 cut(s) 90
BstACI GRCGYC 1 cut(s) 1066
BstAPI GCANNNNNTGC 1 cut(s) 680
BstBAI YACGTR 2 cut(s) 390, 627
BstC8I GCNNGC 3 cut(s) 429, 780, 799
BstDEI CTNAG 8 cut(s) 27, 887, 941, 972, 1188, 1464, 1503, 1751
BstDSI CCRYGG 3 cut(s) 12, 470, 1077
BstF5I GGATG 6 cut(s) 287, 505, 1153, 1479, 1540, 1689
BstH2I RGCGCY 1 cut(s) 1069
BstHHI GCGC 2 cut(s) 427, 1068
BstKTI GATC 4 cut(s) 6, 322, 1258, 1511
BstMAI GTCTC 3 cut(s) 126, 510, 1454
BstMBI GATC 4 cut(s) 3, 319, 1255, 1508
BstMWI GCNNNNNNNGC 2 cut(s) 680, 1474
BstNI CCWGG 8 cut(s) 279, 697, 1140, 1269, 1336, 1470, 1545, 1659
BstNSI RCATGY 2 cut(s) 734, 1532
BstSCI CCNGG 8 cut(s) 277, 695, 1138, 1267, 1334, 1468, 1543, 1657
BstSFI CTRYAG 2 cut(s) 873, 1209
BstV1I GCAGC 1 cut(s) 164
BstV2I GAAGAC 1 cut(s) 570
Bsu15I ATCGAT 1 cut(s) 740
Bsu36I CCTNAGG 2 cut(s) 887, 1751
BsuRI GGCC 4 cut(s) 40, 614, 953, 1082
BsuTUI ATCGAT 1 cut(s) 740
BtgI CCRYGG 3 cut(s) 12, 470, 1077
BtsCI GGATG 6 cut(s) 287, 505, 1153, 1479, 1540, 1689
BtsIMutI CAGTG 2 cut(s) 655, 1461
Cac8I GCNNGC 3 cut(s) 429, 780, 799
CciI TCATGA 1 cut(s) 111
CfoI GCGC 2 cut(s) 427, 1068
Cfr13I GGNCC 2 cut(s) 613, 1136
ClaI ATCGAT 1 cut(s) 740
Csp6I GTAC 2 cut(s) 391, 1206
CviQI GTAC 2 cut(s) 391, 1206
DdeI CTNAG 8 cut(s) 27, 887, 941, 972, 1188, 1464, 1503, 1751
DinI GGCGCC 1 cut(s) 1067
DpnI GATC 4 cut(s) 5, 321, 1257, 1510
DpnII GATC 4 cut(s) 3, 319, 1255, 1508
EaeI YGGCCR 2 cut(s) 951, 1080
Eam1104I CTCTTC 1 cut(s) 90
EarI CTCTTC 1 cut(s) 90
EciI GGCGGA 1 cut(s) 144
Eco130I CCWWGG 2 cut(s) 470, 1077
Eco31I GGTCTC 2 cut(s) 126, 1454
Eco32I GATATC 1 cut(s) 1697
Eco47I GGWCC 1 cut(s) 1136
Eco72I CACGTG 1 cut(s) 627
Eco81I CCTNAGG 2 cut(s) 887, 1751
Eco88I CYCGRG 1 cut(s) 1281
EcoRI GAATTC 2 cut(s) 272, 659
EcoRII CCWGG 8 cut(s) 277, 695, 1138, 1267, 1334, 1468, 1543, 1657
EcoRV GATATC 1 cut(s) 1697
EcoT14I CCWWGG 2 cut(s) 470, 1077
EcoT22I ATGCAT 1 cut(s) 1542
EgeI GGCGCC 1 cut(s) 1067
EheI GGCGCC 1 cut(s) 1067
ErhI CCWWGG 2 cut(s) 470, 1077
FalI AAGNNNNNCTT 4 cut(s) 555, 587, 663, 695
FauNDI CATATG 1 cut(s) 1172
FbaI TGATCA 2 cut(s) 319, 1255
Fnu4HI GCNGC 1 cut(s) 153
FokI GGATG 6 cut(s) 294, 512, 1160, 1486, 1527, 1696
Fsp4HI GCNGC 1 cut(s) 153
FspBI CTAG 4 cut(s) 60, 759, 1239, 1386
GlaI GCGC 2 cut(s) 426, 1067
GluI GCNGC 1 cut(s) 153
GsaI CCCAGC 1 cut(s) 1572
GsuI CTGGAG 1 cut(s) 1641
HaeII RGCGCY 1 cut(s) 1069
HaeIII GGCC 4 cut(s) 40, 614, 953, 1082
HapII CCGG 2 cut(s) 80, 1047
HhaI GCGC 2 cut(s) 427, 1068
Hin1I GRCGYC 1 cut(s) 1066
Hin6I GCGC 2 cut(s) 425, 1066
HinP1I GCGC 2 cut(s) 425, 1066
HindIII AAGCTT 1 cut(s) 309
HinfI GANTC 5 cut(s) 215, 518, 1040, 1295, 1643
HpaII CCGG 2 cut(s) 80, 1047
HphI GGTGA 5 cut(s) 111, 168, 329, 488, 1594
Hpy166II GTNNAC 1 cut(s) 851
Hpy188I TCNGA 4 cut(s) 297, 448, 1300, 1396
Hpy188III TCNNGA 4 cut(s) 112, 634, 1259, 1311
Hpy8I GTNNAC 1 cut(s) 851
HpyAV CCTTC 7 cut(s) 189, 229, 469, 604, 1232, 1620, 1628
HpyCH4III ACNGT 5 cut(s) 293, 650, 713, 721, 1441
HpyCH4IV ACGT 2 cut(s) 389, 626
HpyCH4V TGCA 7 cut(s) 431, 746, 782, 833, 901, 1211, 1540
HpyF10VI GCNNNNNNNGC 2 cut(s) 680, 1474
HpyF3I CTNAG 8 cut(s) 27, 887, 941, 972, 1188, 1464, 1503, 1751
HpySE526I ACGT 2 cut(s) 389, 626
Hsp92I GRCGYC 1 cut(s) 1066
HspAI GCGC 2 cut(s) 425, 1066
KasI GGCGCC 1 cut(s) 1065
Ksp22I TGATCA 2 cut(s) 319, 1255
Kzo9I GATC 4 cut(s) 3, 319, 1255, 1508
LmnI GCTCC 3 cut(s) 16, 213, 334
Lsp1109I GCAGC 1 cut(s) 164
LweI GCATC 2 cut(s) 1464, 1549
MaeI CTAG 4 cut(s) 60, 759, 1239, 1386
MaeII ACGT 2 cut(s) 389, 626
MalI GATC 4 cut(s) 5, 321, 1257, 1510
MboI GATC 4 cut(s) 3, 319, 1255, 1508
MboII GAAGA 9 cut(s) 107, 364, 370, 414, 575, 612, 1498, 1719, 1735
MfeI CAATTG 2 cut(s) 323, 834
MhlI GDGCHC 3 cut(s) 446, 669, 1412
MlsI TGGCCA 2 cut(s) 953, 1082
MluNI TGGCCA 2 cut(s) 953, 1082
Mly113I GGCGCC 1 cut(s) 1066
MlyI GAGTC 2 cut(s) 512, 1034
MmeI TCCRAC 2 cut(s) 236, 915
Mox20I TGGCCA 2 cut(s) 953, 1082
Mph1103I ATGCAT 1 cut(s) 1542
MroXI GAANNNNTTC 2 cut(s) 198, 675
MscI TGGCCA 2 cut(s) 953, 1082
MseI TTAA 5 cut(s) 845, 1010, 1193, 1359, 1801
Msp20I TGGCCA 2 cut(s) 953, 1082
MspI CCGG 2 cut(s) 80, 1047
MspR9I CCNGG 8 cut(s) 279, 697, 1140, 1269, 1336, 1470, 1545, 1659
MunI CAATTG 2 cut(s) 323, 834
Mva1269I GAATGC 1 cut(s) 19
MvaI CCWGG 8 cut(s) 279, 697, 1140, 1269, 1336, 1470, 1545, 1659
MwoI GCNNNNNNNGC 2 cut(s) 680, 1474
NarI GGCGCC 1 cut(s) 1066
NcoI CCATGG 2 cut(s) 470, 1077
NdeI CATATG 1 cut(s) 1172
NdeII GATC 4 cut(s) 3, 319, 1255, 1508
NlaIV GGNNCC 3 cut(s) 330, 632, 1067
NsiI ATGCAT 1 cut(s) 1542
NspI RCATGY 2 cut(s) 734, 1532
PaeR7I CTCGAG 1 cut(s) 1281
PagI TCATGA 1 cut(s) 111
PciI ACATGT 1 cut(s) 1528
PctI GAATGC 1 cut(s) 19
PdmI GAANNNNTTC 2 cut(s) 198, 675
PfeI GAWTC 3 cut(s) 215, 1295, 1643
Pfl23II CGTACG 1 cut(s) 390
PfoI TCCNGGA 1 cut(s) 1657
PkrI GCNGC 1 cut(s) 154
PleI GAGTC 2 cut(s) 512, 1034
PluTI GGCGCC 1 cut(s) 1069
PmaCI CACGTG 1 cut(s) 627
PmlI CACGTG 1 cut(s) 627
PpsI GAGTC 2 cut(s) 512, 1034
Ppu21I YACGTR 2 cut(s) 390, 627
PscI ACATGT 1 cut(s) 1528
Psp6I CCWGG 8 cut(s) 277, 695, 1138, 1267, 1334, 1468, 1543, 1657
PspCI CACGTG 1 cut(s) 627
PspFI CCCAGC 1 cut(s) 1568
PspGI CCWGG 8 cut(s) 277, 695, 1138, 1267, 1334, 1468, 1543, 1657
PspLI CGTACG 1 cut(s) 390
PspN4I GGNNCC 3 cut(s) 330, 632, 1067
PspPI GGNCC 2 cut(s) 613, 1136
PspXI VCTCGAGB 1 cut(s) 1281
PstI CTGCAG 1 cut(s) 1213
RsaI GTAC 2 cut(s) 392, 1207
RsaNI GTAC 2 cut(s) 391, 1206
SaqAI TTAA 5 cut(s) 845, 1010, 1193, 1359, 1801
SatI GCNGC 1 cut(s) 153
Sau3AI GATC 4 cut(s) 3, 319, 1255, 1508
Sau96I GGNCC 2 cut(s) 613, 1136
SchI GAGTC 2 cut(s) 512, 1034
ScrFI CCNGG 8 cut(s) 279, 697, 1140, 1269, 1336, 1470, 1545, 1659
SduI GDGCHC 3 cut(s) 446, 669, 1412
SfaNI GCATC 2 cut(s) 1464, 1549
SfcI CTRYAG 2 cut(s) 873, 1209
SfoI GGCGCC 1 cut(s) 1067
Sfr274I CTCGAG 1 cut(s) 1281
SinI GGWCC 1 cut(s) 1136
SlaI CTCGAG 1 cut(s) 1281
SmlI CTYRAG 4 cut(s) 203, 572, 1177, 1281
SmoI CTYRAG 4 cut(s) 203, 572, 1177, 1281
SsiI CCGC 2 cut(s) 129, 1226
SspDI GGCGCC 1 cut(s) 1065
SspMI CTAG 4 cut(s) 60, 759, 1239, 1386
StyD4I CCNGG 8 cut(s) 277, 695, 1138, 1267, 1334, 1468, 1543, 1657
StyI CCWWGG 2 cut(s) 470, 1077
TaaI ACNGT 5 cut(s) 293, 650, 713, 721, 1441
TaiI ACGT 2 cut(s) 392, 629
TaqI TCGA 6 cut(s) 6, 663, 715, 740, 988, 1282
TfiI GAWTC 3 cut(s) 215, 1295, 1643
Tru1I TTAA 5 cut(s) 845, 1010, 1193, 1359, 1801
Tru9I TTAA 5 cut(s) 845, 1010, 1193, 1359, 1801
TscAI CASTG 2 cut(s) 655, 1468
TseI GCWGC 1 cut(s) 152
TspDTI ATGAA 9 cut(s) 207, 384, 451, 631, 1048, 1436, 1647, 1700, 1733
TspGWI ACGGA 2 cut(s) 1212, 1535
TspRI CASTG 2 cut(s) 655, 1468
VpaK11BI GGWCC 1 cut(s) 1136
XapI RAATTY 5 cut(s) 259, 272, 659, 771, 1096
XceI RCATGY 2 cut(s) 734, 1532
XcmI CCANNNNNNNNNTGG 1 cut(s) 490
XhoI CTCGAG 1 cut(s) 1281
XmnI GAANNNNTTC 2 cut(s) 198, 675
XspI CTAG 4 cut(s) 60, 759, 1239, 1386
Zsp2I ATGCAT 1 cut(s) 1542
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.