Rw5G024420

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000264
Physical Location & Seq
Forward (+)
34710128 .. 34712988
2861 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G024420.1

Sequence Viewer

Length: 1734 bp
ATGGACCGTCCACCGGACACCATGATTGAAGAGAAAGAAGAGCTCATGGTTTCACCAACTGGTGGAGACCCATTTCACAAAATAGCCCATTTTCTGAAACCGATAGTGCCTTCCTCCGTTTTTAAGTTCCCTAATGAATCTTTCTCCTCCCTCTCTTCACATTTTGGGCCAAGAGAATGCCCTTTAGAGGTAGAATTCCCTGGGTGGAGAGTTCAGCTTCAAGAAGATTGGACTTCTTGGGTTGACCGATTGGCTTCACTTCACCAATCCACATGGAAGAAAGCTGGTATATATGAAGCAATCTTCAACTCGACGTACCAAATTAGAAGAAACACCGAGTTGATATATGGGTTGGCAGAGAAATGGTGTTCTGAAACTAATAGTTTCATTTTTGCATGGGGTGAAGCAACAATCACATTAGAGGATTTGATGGTGATGGGAGGCTATTCCGTTCTTGGAGAGTGGATTTTCAACCCTCTTGAAAACAGAGAGCTCAAGGAAATAGAAGATAAACTTAATGAAGTGAGAACAGAAATAAACAGGGGTGCGTCGCGCAGACCTTCCGCTAGCTTATGGTTGAAGAAGTTCAAAAACAATGGCAGTGAATTGGAGCATGAAGCATTTCTTGTGATGTGGTTGTGCAGGTATGTTTTTCCGGAATCTTATAATACAATACAAAAGGGTGTCTTTTCCATTGCAATTCATTTAGCTAGGGGCACCCGAGTTGCACTTGCACCCGCTATTCTTGCTAGCATTTATAAAGATTTGAGTTTATTGAATTCAGCAATTGTGGATTCAAGCAAGTTAGAGACAGGTTGTGATGGTGCTATGAAAGTCAGCATCAAGTCACCATTTCAATTTATTCAGCTTTGGGTGTGGGAAAGATTTGTAGAGCTAAGTCCTATCCCCGGAGTGATCAATCTTGGGCAGCCAAGATTGGCTCGATGGGACAAAGTAAATGGTGTGGAAGTTGAAAACTTGAGGAGGGTTTTAGACTCCGCCGGAGATGGTTTCAAGTGGCGTCCTTATGCCTTGACCACTGAAAACTGGCAGTTGCCTAAATACTATCCTGAAGAGGAAATGCATGTATCAGATTGTTCAGGTTTGGATGATGAGTTGCATTCATTTTTCAGATGCTTGAGGGCCTGTGAGCTGTCTGGATTTGGTACTCTTGAGCAGTACCTTCCGCATAGAGTAGCAATGCAGCTTGGATTTGATCAAGACATTCCATGTGTTGTCGCTCGATCCAATCAGAGTTCTGATATAGCTTGGAGTCATTACATCAAGAAATTTGGGAATGCAAGTTTATATGTTCCATCCAGATTTTTGAAGGCAGATATAAGCACAAGATACTTGAAGTGGTGGAAGGAATCAATGTTGGGTCTCAAAAAGACTATCACGCCAAAAGTAAAGAAATCAAAGTGTATTGGAGGATCACAAATGAGGGCTAAACCATCCCCTGTACATCCTGGTTCTGCCCCCAAGAAAGCTGTAGAAGGATCTAAGAAATGGAAGAAGAATCATGATTTCATCGTTCCTCCTGAAAATTTGGAGCTGCTTTCAAAAGGAAGGAATGAAGGTAATGATTCCCTTTTTCCTCCAGGATTTCCTTGCAAATGTAGTAGAATGGAAGCCGAAGGTTCAATGGATGAAGATGGACTAACTTTATCAGAGCTTATGAAATATAACAAATTCAAAAAGATATTTTATGGATTGCTTAGAATACAGTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

577

Amino Acids

65.91

Weight (kDa)

8.14

Isoelectric Point (pI)

40.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 96 - 456 6.8e-106 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000264)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48145 AT1G50745
fragaria_vesca FvH4_3g22280 FvH4_3g22281 FvH4_3g22290 FvH4_3g22300 FvH4_3g22321 FvH4_3g22330 FvH4_3g22330 FvH4_3g22331
rosa_chinensis RchiOBHm_Chr5g0038351 RchiOBHm_Chr5g0038361 RchiOBHm_Chr5g0038371 RchiOBHm_Chr5g0038381 RchiOBHm_Chr5g0038421 RchiOBHm_Chr5g0038451 RchiOBHm_Chr5g0038471 RchiOBHm_Chr5g0038491 RchiOBHm_Chr5g0038561 RchiOBHm_Chr5g0038731 RchiOBHm_Chr5g0038741 RchiOBHm_Chr5g0038771 RchiOBHm_Chr5g0038781 RchiOBHm_Chr5g0038791 RchiOBHm_Chr5g0038801 RchiOBHm_Chr5g0038831
rosa_laevigata RLG00000008815 RLG00000020213 RLG00000033850 RLG00000033864 RLG00000033875
rosa_multiflora Rmu_co8006804.1_g000001 Rmu_co8168012.1_g000001 Rmu_co8236409.1_g000001 Rmu_co8247247.1_g000001 Rmu_co8440391.1_g000001 Rmu_sc0000533.1_g000088 Rmu_sc0003198.1_g000005 Rmu_sc0003198.1_g000006 Rmu_sc0003198.1_g000007 Rmu_sc0003198.1_g000008 Rmu_sc0003198.1_g000013 Rmu_sc0005722.1_g000005 Rmu_sc0005722.1_g000007 Rmu_sc0005722.1_g000012 Rmu_sc0005722.1_g000013 Rmu_sc0005836.1_g000001 Rmu_sc0009149.1_g000006 Rmu_sc0009149.1_g000018 Rmu_sc0009149.1_g000020 Rmu_sc0017397.1_g000004 Rmu_sc0025071.1_g000001 Rmu_sc0032545.1_g000001 Rmu_sc0038346.1_g000001
rosa_roxburghii Rroxscaffold_1G00042150 Rroxscaffold_1G00042180 Rroxscaffold_1G00042230 Rroxscaffold_1G00042240 Rroxscaffold_1G00042260 Rroxscaffold_1G00042320 Rroxscaffold_1G00042330 Rroxscaffold_1G00042350 Rroxscaffold_1G00042360 Rroxscaffold_1G00042370 Rroxscaffold_1G00042400 Rroxscaffold_1G00042430 Rroxscaffold_1G00042440 Rroxscaffold_1G00042510 Rroxscaffold_1G00042580 Rroxscaffold_1G00042620
rosa_rugosa Rorug05G0172200 Rorug05G0172300 Rorug05G0172500 Rorug05G0173100 Rorug05G0173200.1 Rorug05G0173600 Rorug05G0173800 Rorug05G0174000 Rorug05G0174100 Rorug05G0174200 Rorug05G0174200 Rorug05G0174400 Rorug05G0174500 Rorug05G0174600 Rorug05G0174700 Rorug05G0174800
rosa_samantha Rh5AG259600 Rh5AG260200 Rh5AG260600 Rh5AG260800 Rh5AG261300 Rh5AG261400 Rh5AG261500 Rh5AG261700 Rh5AG261900 Rh5BG263600 Rh5BG264200 Rh5BG264500 Rh5BG264800 Rh5BG265100 Rh5BG265200 Rh5BG265500 Rh5BG265600 Rh5BG266000 Rh5CG295900 Rh5CG296700 Rh5CG296800 Rh5CG296900 Rh5CG297200 Rh5CG297700 Rh5CG297900 Rh5CG298100 Rh5CG298200 Rh5CG298300 Rh5CG298400 Rh5CG298500 Rh5CG298900 Rh5CG299200 Rh6DG125700
rosa_wichuraiana Rw0G001950 Rw0G001960 Rw0G013290 Rw5G024020 Rw5G024310 Rw5G024340 Rw5G024350 Rw5G024370 Rw5G024380 Rw5G024390 Rw5G024400 Rw5G024420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 666, 759
Acc36I ACCTGC 1 cut(s) 633
AccB1I GGYRCC 1 cut(s) 716
AccB7I CCANNNNNTGG 1 cut(s) 62
AccII CGCG 1 cut(s) 553
AccIII TCCGGA 1 cut(s) 655
AciI CCGC 4 cut(s) 564, 738, 999, 1187
AclWI GGATC 3 cut(s) 1239, 1441, 1507
AcsI RAATTY 5 cut(s) 194, 778, 1289, 1546, 1691
AcuI CTGAAG 1 cut(s) 1092
AcyI GRCGYC 1 cut(s) 1021
AfaI GTAC 4 cut(s) 317, 1168, 1181, 1464
AfiI CCNNNNNNNGG 4 cut(s) 13, 62, 187, 908
AjnI CCWGG 3 cut(s) 199, 1468, 1600
Alw21I GWGCWC 2 cut(s) 45, 495
Alw26I GTCTC 3 cut(s) 60, 803, 1388
AlwI GGATC 3 cut(s) 1239, 1441, 1507
Ama87I CYCGRG 1 cut(s) 720
Aor13HI TCCGGA 1 cut(s) 655
AoxI GGCC 2 cut(s) 167, 1143
ApeKI GCWGC 3 cut(s) 928, 1204, 1555
ApoI RAATTY 5 cut(s) 194, 778, 1289, 1546, 1691
Asp700I GAANNNNTTC 2 cut(s) 584, 621
AspLEI GCGC 1 cut(s) 555
AspS9I GGNCC 3 cut(s) 4, 167, 1143
AsuC2I CCSGG 1 cut(s) 909
AsuHPI GGTGA 5 cut(s) 45, 254, 413, 445, 840
AsuNHI GCTAGC 2 cut(s) 566, 749
AvaI CYCGRG 1 cut(s) 720
AvaII GGWCC 1 cut(s) 4
BaeGI GKGCMC 1 cut(s) 719
BanI GGYRCC 1 cut(s) 716
BanII GRGCYC 2 cut(s) 45, 495
Bbv12I GWGCWC 2 cut(s) 45, 495
BbvI GCAGC 3 cut(s) 940, 1216, 1542
BccI CCATC 8 cut(s) 424, 430, 815, 939, 1001, 1324, 1462, 1649
BciT130I CCWGG 3 cut(s) 201, 1470, 1602
BclI TGATCA 2 cut(s) 915, 1216
BcnI CCSGG 1 cut(s) 909
BcoDI GTCTC 3 cut(s) 60, 803, 1388
BfaI CTAG 3 cut(s) 567, 711, 750
BfmI CTRYAG 1 cut(s) 1491
BfuAI ACCTGC 1 cut(s) 633
BisI GCNGC 3 cut(s) 929, 1205, 1556
BlsI GCNGC 3 cut(s) 930, 1206, 1557
Bme1390I CCNGG 4 cut(s) 201, 909, 1470, 1602
Bme18I GGWCC 1 cut(s) 4
BmeT110I CYCGRG 1 cut(s) 720
BmgT120I GGNCC 3 cut(s) 4, 167, 1143
BmiI GGNNCC 1 cut(s) 718
BmrFI CCNGG 4 cut(s) 201, 909, 1470, 1602
BmsI GCATC 2 cut(s) 849, 1124
BmtI GCTAGC 2 cut(s) 570, 753
BpmI CTGGAG 1 cut(s) 1584
BpuEI CTTGAG 4 cut(s) 479, 1000, 1159, 1193
BpuMI CCSGG 1 cut(s) 909
BsaHI GRCGYC 1 cut(s) 1021
BsaI GGTCTC 2 cut(s) 60, 1388
BsaJI CCNNGG 3 cut(s) 199, 200, 907
BsaWI WCCGGW 2 cut(s) 13, 655
Bsc4I CCNNNNNNNGG 4 cut(s) 13, 62, 187, 908
Bse1I ACTGG 2 cut(s) 64, 1052
Bse3DI GCAATG 2 cut(s) 693, 1206
BseAI TCCGGA 1 cut(s) 655
BseBI CCWGG 3 cut(s) 201, 1470, 1602
BseDI CCNNGG 3 cut(s) 199, 200, 907
BseGI GGATG 5 cut(s) 1114, 1316, 1454, 1465, 1654
BseLI CCNNNNNNNGG 4 cut(s) 13, 62, 187, 908
BseMI GCAATG 2 cut(s) 693, 1206
BseNI ACTGG 2 cut(s) 64, 1052
BseRI GAGGAG 2 cut(s) 136, 997
BseSI GKGCMC 1 cut(s) 719
BseXI GCAGC 3 cut(s) 940, 1216, 1542
BsgI GTGCAG 1 cut(s) 661
Bsh1236I CGCG 1 cut(s) 553
BshFI GGCC 2 cut(s) 169, 1145
BshNI GGYRCC 1 cut(s) 716
BsiHKAI GWGCWC 2 cut(s) 45, 495
BsiHKCI CYCGRG 1 cut(s) 720
BsiSI CCGG 4 cut(s) 14, 656, 909, 1002
BslFI GGGAC 1 cut(s) 962
BslI CCNNNNNNNGG 4 cut(s) 13, 62, 187, 908
BsmAI GTCTC 3 cut(s) 60, 803, 1388
BsmFI GGGAC 1 cut(s) 962
BsmI GAATGC 3 cut(s) 182, 1120, 1303
BsnI GGCC 2 cut(s) 169, 1145
Bso31I GGTCTC 2 cut(s) 60, 1388
BsoBI CYCGRG 1 cut(s) 720
Bsp1286I GDGCHC 3 cut(s) 45, 495, 719
Bsp13I TCCGGA 1 cut(s) 655
Bsp1407I TGTACA 1 cut(s) 1462
Bsp143I GATC 5 cut(s) 915, 1216, 1244, 1433, 1499
BspACI CCGC 4 cut(s) 564, 738, 999, 1187
BspANI GGCC 2 cut(s) 169, 1145
BspEI TCCGGA 1 cut(s) 655
BspFNI CGCG 1 cut(s) 553
BspHI TCATGA 1 cut(s) 1522
BspLI GGNNCC 1 cut(s) 718
BspMI ACCTGC 1 cut(s) 633
BspOI GCTAGC 2 cut(s) 570, 753
BspPI GGATC 3 cut(s) 1239, 1441, 1507
BspQI GCTCTTC 1 cut(s) 33
BspT107I GGYRCC 1 cut(s) 716
BspTNI GGTCTC 2 cut(s) 60, 1388
BsrDI GCAATG 2 cut(s) 693, 1206
BsrGI TGTACA 1 cut(s) 1462
BsrI ACTGG 2 cut(s) 64, 1052
BssECI CCNNGG 3 cut(s) 199, 200, 907
BssMI GATC 5 cut(s) 915, 1216, 1244, 1433, 1499
BssNI GRCGYC 1 cut(s) 1021
Bst2UI CCWGG 3 cut(s) 201, 1470, 1602
Bst4CI ACNGT 2 cut(s) 8, 1728
Bst6I CTCTTC 4 cut(s) 24, 33, 160, 1068
BstACI GRCGYC 1 cut(s) 1021
BstAUI TGTACA 1 cut(s) 1462
BstC8I GCNNGC 2 cut(s) 568, 751
BstDEI CTNAG 3 cut(s) 896, 1503, 1718
BstF5I GGATG 5 cut(s) 1114, 1316, 1454, 1465, 1654
BstFNI CGCG 1 cut(s) 553
BstHHI GCGC 1 cut(s) 555
BstKTI GATC 5 cut(s) 918, 1219, 1247, 1436, 1502
BstMAI GTCTC 3 cut(s) 60, 803, 1388
BstMBI GATC 5 cut(s) 915, 1216, 1244, 1433, 1499
BstMWI GCNNNNNNNGC 1 cut(s) 746
BstNI CCWGG 3 cut(s) 201, 1470, 1602
BstNSI RCATGY 1 cut(s) 1088
BstSCI CCNGG 4 cut(s) 199, 907, 1468, 1600
BstSFI CTRYAG 1 cut(s) 1491
BstSLI GKGCMC 1 cut(s) 719
BstUI CGCG 1 cut(s) 553
BstV1I GCAGC 3 cut(s) 940, 1216, 1542
BstX2I RGATCY 1 cut(s) 1499
BstYI RGATCY 1 cut(s) 1499
BsuRI GGCC 2 cut(s) 169, 1145
BtsCI GGATG 5 cut(s) 1114, 1316, 1454, 1465, 1654
BtsI GCAGTG 1 cut(s) 607
BtsIMutI CAGTG 2 cut(s) 607, 1038
BveI ACCTGC 1 cut(s) 633
Cac8I GCNNGC 2 cut(s) 568, 751
CciI TCATGA 1 cut(s) 1522
CfoI GCGC 1 cut(s) 555
Cfr13I GGNCC 3 cut(s) 4, 167, 1143
CseI GACGC 2 cut(s) 537, 1010
Csp6I GTAC 4 cut(s) 316, 1167, 1180, 1463
CviAII CATG 8 cut(s) 22, 46, 273, 396, 614, 1085, 1230, 1523
CviQI GTAC 4 cut(s) 316, 1167, 1180, 1463
DdeI CTNAG 3 cut(s) 896, 1503, 1718
DpnI GATC 5 cut(s) 917, 1218, 1246, 1435, 1501
DpnII GATC 5 cut(s) 915, 1216, 1244, 1433, 1499
Eam1104I CTCTTC 4 cut(s) 24, 33, 160, 1068
EarI CTCTTC 4 cut(s) 24, 33, 160, 1068
EciI GGCGGA 1 cut(s) 988
Ecl136II GAGCTC 2 cut(s) 43, 493
Eco24I GRGCYC 2 cut(s) 45, 495
Eco31I GGTCTC 2 cut(s) 60, 1388
Eco47I GGWCC 1 cut(s) 4
Eco53kI GAGCTC 2 cut(s) 43, 493
Eco57I CTGAAG 1 cut(s) 1092
Eco88I CYCGRG 1 cut(s) 720
EcoICRI GAGCTC 2 cut(s) 43, 493
EcoO109I RGGNCCY 1 cut(s) 1143
EcoRI GAATTC 2 cut(s) 194, 778
EcoRII CCWGG 3 cut(s) 199, 1468, 1600
EcoT22I ATGCAT 1 cut(s) 1086
EcoT38I GRGCYC 2 cut(s) 45, 495
FaeI CATG 8 cut(s) 25, 49, 276, 399, 617, 1088, 1233, 1526
FalI AAGNNNNNCTT 6 cut(s) 498, 530, 609, 641, 671, 703
FaqI GGGAC 1 cut(s) 962
FatI CATG 8 cut(s) 21, 45, 272, 395, 613, 1084, 1229, 1522
FauI CCCGC 1 cut(s) 745
FbaI TGATCA 2 cut(s) 915, 1216
Fnu4HI GCNGC 3 cut(s) 929, 1205, 1556
FokI GGATG 5 cut(s) 1121, 1303, 1441, 1452, 1661
FriOI GRGCYC 2 cut(s) 45, 495
Fsp4HI GCNGC 3 cut(s) 929, 1205, 1556
FspBI CTAG 3 cut(s) 567, 711, 750
GlaI GCGC 1 cut(s) 554
GluI GCNGC 3 cut(s) 929, 1205, 1556
GsuI CTGGAG 1 cut(s) 1584
HaeIII GGCC 2 cut(s) 169, 1145
HapII CCGG 4 cut(s) 14, 656, 909, 1002
HgaI GACGC 2 cut(s) 537, 1010
HhaI GCGC 1 cut(s) 555
Hin1I GRCGYC 1 cut(s) 1021
Hin1II CATG 8 cut(s) 25, 49, 276, 399, 617, 1088, 1233, 1526
Hin6I GCGC 1 cut(s) 553
HinP1I GCGC 1 cut(s) 553
HincII GTYRAC 1 cut(s) 244
HindII GTYRAC 1 cut(s) 244
HinfI GANTC 8 cut(s) 137, 659, 794, 995, 1273, 1370, 1519, 1586
HpaII CCGG 4 cut(s) 14, 656, 909, 1002
HphI GGTGA 5 cut(s) 45, 254, 413, 445, 840
Hpy166II GTNNAC 2 cut(s) 11, 244
Hpy188I TCNGA 7 cut(s) 96, 373, 1093, 1133, 1254, 1261, 1672
Hpy8I GTNNAC 2 cut(s) 11, 244
Hpy99I CGWCG 2 cut(s) 316, 553
HpyAV CCTTC 9 cut(s) 120, 570, 1193, 1324, 1360, 1490, 1563, 1571, 1631
HpyCH4III ACNGT 2 cut(s) 8, 1728
HpyCH4IV ACGT 1 cut(s) 314
HpyF10VI GCNNNNNNNGC 1 cut(s) 746
HpyF3I CTNAG 3 cut(s) 896, 1503, 1718
HpySE526I ACGT 1 cut(s) 314
Hsp92I GRCGYC 1 cut(s) 1021
Hsp92II CATG 8 cut(s) 25, 49, 276, 399, 617, 1088, 1233, 1526
HspAI GCGC 1 cut(s) 553
Kpn2I TCCGGA 1 cut(s) 655
Ksp22I TGATCA 2 cut(s) 915, 1216
Kzo9I GATC 5 cut(s) 915, 1216, 1244, 1433, 1499
LguI GCTCTTC 1 cut(s) 33
LmnI GCTCC 2 cut(s) 610, 1552
Lsp1109I GCAGC 3 cut(s) 940, 1216, 1542
LweI GCATC 2 cut(s) 849, 1124
MaeI CTAG 3 cut(s) 567, 711, 750
MaeII ACGT 1 cut(s) 314
MaeIII GTNAC 1 cut(s) 846
MalI GATC 5 cut(s) 917, 1218, 1246, 1435, 1501
MboI GATC 5 cut(s) 915, 1216, 1244, 1433, 1499
MfeI CAATTG 1 cut(s) 786
MflI RGATCY 1 cut(s) 1499
MhlI GDGCHC 3 cut(s) 45, 495, 719
MlyI GAGTC 2 cut(s) 989, 1282
Mph1103I ATGCAT 1 cut(s) 1086
MroI TCCGGA 1 cut(s) 655
MroXI GAANNNNTTC 2 cut(s) 584, 621
MseI TTAA 2 cut(s) 123, 516
MspI CCGG 4 cut(s) 14, 656, 909, 1002
MspR9I CCNGG 4 cut(s) 201, 909, 1470, 1602
MunI CAATTG 1 cut(s) 786
Mva1269I GAATGC 3 cut(s) 182, 1120, 1303
MvaI CCWGG 3 cut(s) 201, 1470, 1602
MvnI CGCG 1 cut(s) 553
MwoI GCNNNNNNNGC 1 cut(s) 746
NciI CCSGG 1 cut(s) 909
NdeII GATC 5 cut(s) 915, 1216, 1244, 1433, 1499
NheI GCTAGC 2 cut(s) 566, 749
NlaIII CATG 8 cut(s) 25, 49, 276, 399, 617, 1088, 1233, 1526
NlaIV GGNNCC 1 cut(s) 718
NmuCI GTSAC 1 cut(s) 846
NsiI ATGCAT 1 cut(s) 1086
NspI RCATGY 1 cut(s) 1088
PagI TCATGA 1 cut(s) 1522
PasI CCCWGGG 1 cut(s) 200
PciSI GCTCTTC 1 cut(s) 33
PctI GAATGC 3 cut(s) 182, 1120, 1303
PdmI GAANNNNTTC 2 cut(s) 584, 621
PfeI GAWTC 6 cut(s) 137, 659, 794, 1370, 1519, 1586
PflMI CCANNNNNTGG 1 cut(s) 62
PfoI TCCNGGA 1 cut(s) 1600
PkrI GCNGC 3 cut(s) 930, 1206, 1557
PleI GAGTC 2 cut(s) 989, 1281
PpsI GAGTC 2 cut(s) 989, 1281
PsiI TTATAA 2 cut(s) 666, 759
Psp124BI GAGCTC 2 cut(s) 45, 495
Psp6I CCWGG 3 cut(s) 199, 1468, 1600
PspGI CCWGG 3 cut(s) 199, 1468, 1600
PspN4I GGNNCC 1 cut(s) 718
PspPI GGNCC 3 cut(s) 4, 167, 1143
PsuI RGATCY 1 cut(s) 1499
RsaI GTAC 4 cut(s) 317, 1168, 1181, 1464
RsaNI GTAC 4 cut(s) 316, 1167, 1180, 1463
SacI GAGCTC 2 cut(s) 45, 495
SapI GCTCTTC 1 cut(s) 33
SaqAI TTAA 2 cut(s) 123, 516
SatI GCNGC 3 cut(s) 929, 1205, 1556
Sau3AI GATC 5 cut(s) 915, 1216, 1244, 1433, 1499
Sau96I GGNCC 3 cut(s) 4, 167, 1143
SchI GAGTC 2 cut(s) 989, 1282
ScrFI CCNGG 4 cut(s) 201, 909, 1470, 1602
SduI GDGCHC 3 cut(s) 45, 495, 719
SfaNI GCATC 2 cut(s) 849, 1124
SfcI CTRYAG 1 cut(s) 1491
SinI GGWCC 1 cut(s) 4
SmlI CTYRAG 4 cut(s) 494, 979, 1138, 1172
SmoI CTYRAG 4 cut(s) 494, 979, 1138, 1172
SsiI CCGC 4 cut(s) 564, 738, 999, 1187
SspMI CTAG 3 cut(s) 567, 711, 750
SstI GAGCTC 2 cut(s) 45, 495
StyD4I CCNGG 4 cut(s) 199, 907, 1468, 1600
TaaI ACNGT 2 cut(s) 8, 1728
TaiI ACGT 1 cut(s) 317
TaqI TCGA 3 cut(s) 311, 943, 1243
TaqII GACCGA 1 cut(s) 261
TatI WGTACW 1 cut(s) 1462
TfiI GAWTC 6 cut(s) 137, 659, 794, 1370, 1519, 1586
Tru1I TTAA 2 cut(s) 123, 516
Tru9I TTAA 2 cut(s) 123, 516
TscAI CASTG 2 cut(s) 607, 1045
TseFI GTSAC 1 cut(s) 846
TseI GCWGC 3 cut(s) 928, 1204, 1555
Tsp45I GTSAC 1 cut(s) 846
TspGWI ACGGA 2 cut(s) 106, 439
TspRI CASTG 2 cut(s) 607, 1045
Van91I CCANNNNNTGG 1 cut(s) 62
VpaK11BI GGWCC 1 cut(s) 4
XapI RAATTY 5 cut(s) 194, 778, 1289, 1546, 1691
XceI RCATGY 1 cut(s) 1088
XmnI GAANNNNTTC 2 cut(s) 584, 621
XspI CTAG 3 cut(s) 567, 711, 750
Zsp2I ATGCAT 1 cut(s) 1086
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.