Rroxscaffold_1G00042620

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000264
Physical Location & Seq
Reverse (-)
60959030 .. 60960898
1869 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00042620.1

Sequence Viewer

Length: 1794 bp
ATGGTTTTGGGAGGCTTTTCTGTTTTGGGATACTCCATTTTAAGTCCTATTGAAAGCAGAGAACTGAAAGAAATAGAAGACAAACTTGAGGAAGAGCGAATTGGACTTTACAATCGCGAGGGTGGGGTTAGAGTTGCTTACACACAACTATGGATGAAGAAGTTCATGAAGAGTGGAAGTGAATTAGAGCACGAAGCATTCCTTGTGTTCTGGCTGTCCAGGTATGTTTTCCATAATTCTCACAATGCAGTCAATAAGGCTGTTTTCTCCATTGCAATTCGTCTAGCTAGGGGGATTAGAGTTGCGCTTGCACCAGCTATTCTTGCTCACATTTATAGAGATTTGAGTCTGCTCAAAAGGACAATTGTATCTTCAAATGAATTAAATGTCAAGAATGCTTTTGTACTGGAACTCATAATCAAGTCACAGTTTCAATTAGTTCAGATTTGGGCTTGGGAACGATTTCTGGAACTTAGGCCAAAGCCCAAAGTTATATGCTATGGTGAGCCGAGATTGGCTCGATGGGGTAAAGTAGATTGTCTGAATGTTGCAAATATGAGGAGGGTTTTAGACTCAGCAGGTGAAGGTTTCATGTGGCGCCCTTATGCCATGGCCATTAAGAACTGGAATTGTCCTAGATACTATGTTGAAAAGGAAGAGTGGGTATTGGTTGGTGCAGGCTTGGATGATGAACTATTGTCGTTTGCCATGTGCTTGAGGGTGGCTGAGTTAGTTGGATTTGATACTATACAGCAGTACCTTCCACATAGAGTAGCTAGGCAATTTGGATTTGATCAAGACCTTCCGTGTTCTGTTTCTGGACACAACCAAAATTATGACAACACGAAATTGTATATTCCGTCCAGGCTTTCTGAGGCAGATGTTAGCATTAGATACTTAAATTGGTGGAAGGAATCTGTGTCAGGCCTCGAACAGAGACATATTCCATCGAAAAAGAAAGTTAAGAGAGCTGTAGACTTGATATATGATACTACCAGTCCTTGTATTTGTTCTCCAAAGAATTCAGAAGAACTTGTGCAGGTTTCTGCAGGACGGAATGAAGGTGAATATTCTTTTTGTCCTCCAGGATTTTCTCTCAAAAGGAATAGAATGGAAGCTGGAGATCCTATAGACGAAGATGATCTAACTATATCAGAGGCTTTGAAACTTAAGAAGAAGCTTAAAACTGTTGAAACTGGAAAATATACTGACAGTGCGAAGTTGTCAAGTCCCAATCAAATCATGGCATCTTCATCTGCAGATGAAAGTTCTATGAATATTATGAAGTCAAAAATACTGGAAAAAGAAGTTGTGTTGAGTAGTGAAGTGGTGACTTGGGGAAGTAAAGGTCAGTGGAAACTGGACAAGGTAATCATGAGTCAGGAAAGAAGTCTAAGCAATGACATGGTGAGCATCGTTGGCAATAAATGTCCTAGCAGCACCTCGTTATCTGATAAACCGGAATGTGGTAGCAGCATGTCTTTATTTAAGAAACGGGAATGTGCTAGCAGCAGTTCATTATTTGTGAAACAAGAATGTACTAGCAGTGGCTCTTTATTTGTAAAACTGGAATGTGCTAGCATCAGCCCTTCAATTGCAGATGAAGGTAAGGGTGAGAGGAAAATGAAAAATGTAATGAGAAGTAAGGCAAGAAGCAGCTCCTTATTCAAGAAACGGGAAGATGGCAGCAGCCGCACTTCATTTGAAAAACGAGTTTCAGAGCTTAAAGCTAAGGTTTACAGGCTGGAAAAGGTGGTTCAGGTGTTGAAAGCAAATACTTTTGGGAGGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

597

Amino Acids

67.57

Weight (kDa)

9.18

Isoelectric Point (pI)

46.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 1 - 304 6.6e-77 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000264)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48145 AT1G50745
fragaria_vesca FvH4_3g22280 FvH4_3g22281 FvH4_3g22290 FvH4_3g22300 FvH4_3g22321 FvH4_3g22330 FvH4_3g22330 FvH4_3g22331
rosa_chinensis RchiOBHm_Chr5g0038351 RchiOBHm_Chr5g0038361 RchiOBHm_Chr5g0038371 RchiOBHm_Chr5g0038381 RchiOBHm_Chr5g0038421 RchiOBHm_Chr5g0038451 RchiOBHm_Chr5g0038471 RchiOBHm_Chr5g0038491 RchiOBHm_Chr5g0038561 RchiOBHm_Chr5g0038731 RchiOBHm_Chr5g0038741 RchiOBHm_Chr5g0038771 RchiOBHm_Chr5g0038781 RchiOBHm_Chr5g0038791 RchiOBHm_Chr5g0038801 RchiOBHm_Chr5g0038831
rosa_laevigata RLG00000008815 RLG00000020213 RLG00000033850 RLG00000033864 RLG00000033875
rosa_multiflora Rmu_co8006804.1_g000001 Rmu_co8168012.1_g000001 Rmu_co8236409.1_g000001 Rmu_co8247247.1_g000001 Rmu_co8440391.1_g000001 Rmu_sc0000533.1_g000088 Rmu_sc0003198.1_g000005 Rmu_sc0003198.1_g000006 Rmu_sc0003198.1_g000007 Rmu_sc0003198.1_g000008 Rmu_sc0003198.1_g000013 Rmu_sc0005722.1_g000005 Rmu_sc0005722.1_g000007 Rmu_sc0005722.1_g000012 Rmu_sc0005722.1_g000013 Rmu_sc0005836.1_g000001 Rmu_sc0009149.1_g000006 Rmu_sc0009149.1_g000018 Rmu_sc0009149.1_g000020 Rmu_sc0017397.1_g000004 Rmu_sc0025071.1_g000001 Rmu_sc0032545.1_g000001 Rmu_sc0038346.1_g000001
rosa_roxburghii Rroxscaffold_1G00042150 Rroxscaffold_1G00042180 Rroxscaffold_1G00042230 Rroxscaffold_1G00042240 Rroxscaffold_1G00042260 Rroxscaffold_1G00042320 Rroxscaffold_1G00042330 Rroxscaffold_1G00042350 Rroxscaffold_1G00042360 Rroxscaffold_1G00042370 Rroxscaffold_1G00042400 Rroxscaffold_1G00042430 Rroxscaffold_1G00042440 Rroxscaffold_1G00042510 Rroxscaffold_1G00042580 Rroxscaffold_1G00042620
rosa_rugosa Rorug05G0172200 Rorug05G0172300 Rorug05G0172500 Rorug05G0173100 Rorug05G0173200.1 Rorug05G0173600 Rorug05G0173800 Rorug05G0174000 Rorug05G0174100 Rorug05G0174200 Rorug05G0174200 Rorug05G0174400 Rorug05G0174500 Rorug05G0174600 Rorug05G0174700 Rorug05G0174800
rosa_samantha Rh5AG259600 Rh5AG260200 Rh5AG260600 Rh5AG260800 Rh5AG261300 Rh5AG261400 Rh5AG261500 Rh5AG261700 Rh5AG261900 Rh5BG263600 Rh5BG264200 Rh5BG264500 Rh5BG264800 Rh5BG265100 Rh5BG265200 Rh5BG265500 Rh5BG265600 Rh5BG266000 Rh5CG295900 Rh5CG296700 Rh5CG296800 Rh5CG296900 Rh5CG297200 Rh5CG297700 Rh5CG297900 Rh5CG298100 Rh5CG298200 Rh5CG298300 Rh5CG298400 Rh5CG298500 Rh5CG298900 Rh5CG299200 Rh6DG125700
rosa_wichuraiana Rw0G001950 Rw0G001960 Rw0G013290 Rw5G024020 Rw5G024310 Rw5G024340 Rw5G024350 Rw5G024370 Rw5G024380 Rw5G024390 Rw5G024400 Rw5G024420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 569
Acc36I ACCTGC 2 cut(s) 569, 1030
AccB1I GGYRCC 1 cut(s) 597
AccI GTMKAC 1 cut(s) 975
AccII CGCG 1 cut(s) 117
AciI CCGC 1 cut(s) 1693
AclWI GGATC 1 cut(s) 1118
AcoI YGGCCR 1 cut(s) 612
AcsI RAATTY 1 cut(s) 1021
AcyI GRCGYC 1 cut(s) 598
AfaI GTAC 3 cut(s) 405, 758, 1540
AfiI CCNNNNNNNGG 1 cut(s) 1466
AflII CTTAAG 1 cut(s) 1169
AjnI CCWGG 3 cut(s) 218, 863, 1084
AjuI GAANNNNNNNTTGG 2 cut(s) 84, 116
AluBI AGCT 9 cut(s) 287, 317, 776, 971, 1118, 1180, 1659, 1723, 1730
AluI AGCT 9 cut(s) 287, 317, 776, 971, 1118, 1180, 1659, 1723, 1730
Alw21I GWGCWC 1 cut(s) 192
Alw26I GTCTC 1 cut(s) 931
AlwI GGATC 1 cut(s) 1118
AoxI GGCC 3 cut(s) 476, 612, 925
ApeKI GCWGC 6 cut(s) 1437, 1473, 1509, 1656, 1686, 1689
ApoI RAATTY 1 cut(s) 1021
Asp700I GAANNNNTTC 2 cut(s) 161, 462
AspLEI GCGC 2 cut(s) 307, 600
AsuHPI GGTGA 6 cut(s) 515, 593, 1076, 1342, 1420, 1625
AsuNHI GCTAGC 2 cut(s) 1505, 1577
BaeI ACNNNNGTAYC 4 cut(s) 351, 384, 740, 773
BalI TGGCCA 1 cut(s) 614
BanI GGYRCC 1 cut(s) 597
BbsI GAAGAC 1 cut(s) 84
Bbv12I GWGCWC 1 cut(s) 192
BbvI GCAGC 6 cut(s) 1449, 1485, 1521, 1668, 1698, 1701
BccI CCATC 3 cut(s) 516, 955, 1676
BciT130I CCWGG 3 cut(s) 220, 865, 1086
BciVI GTATCC 1 cut(s) 23
BclI TGATCA 1 cut(s) 793
BcoDI GTCTC 1 cut(s) 931
BfaI CTAG 8 cut(s) 284, 288, 636, 777, 1434, 1506, 1542, 1578
BfmI CTRYAG 4 cut(s) 972, 1047, 1128, 1257
BfoI RGCGCY 1 cut(s) 601
BfrI CTTAAG 1 cut(s) 1169
BfuAI ACCTGC 2 cut(s) 569, 1030
BfuI GTATCC 1 cut(s) 23
BisI GCNGC 7 cut(s) 1438, 1474, 1510, 1657, 1687, 1690, 1693
BlsI GCNGC 7 cut(s) 1439, 1475, 1511, 1658, 1688, 1691, 1694
Bme1390I CCNGG 3 cut(s) 220, 865, 1086
BmiI GGNNCC 1 cut(s) 599
BmrFI CCNGG 3 cut(s) 220, 865, 1086
BmsI GCATC 3 cut(s) 1256, 1422, 1590
BmtI GCTAGC 2 cut(s) 1509, 1581
BpiI GAAGAC 1 cut(s) 84
BplI GAGNNNNNCTC 2 cut(s) 502, 534
BpmI CTGGAG 2 cut(s) 1068, 1140
Bpu10I CCTNAGC 1 cut(s) 1731
BpuEI CTTGAG 2 cut(s) 107, 736
BsaHI GRCGYC 1 cut(s) 598
BsaJI CCNNGG 1 cut(s) 609
BsaWI WCCGGW 1 cut(s) 1459
Bsc4I CCNNNNNNNGG 1 cut(s) 1466
Bse1I ACTGG 7 cut(s) 411, 629, 996, 1201, 1302, 1365, 1572
Bse3DI GCAATG 2 cut(s) 270, 1405
BseBI CCWGG 3 cut(s) 220, 865, 1086
BseDI CCNNGG 1 cut(s) 609
BseGI GGATG 2 cut(s) 159, 691
BseLI CCNNNNNNNGG 1 cut(s) 1466
BseMI GCAATG 2 cut(s) 270, 1405
BseMII CTCAG 3 cut(s) 588, 717, 864
BseNI ACTGG 7 cut(s) 411, 629, 996, 1201, 1302, 1365, 1572
BseRI GAGGAG 1 cut(s) 574
BseXI GCAGC 6 cut(s) 1449, 1485, 1521, 1668, 1698, 1701
BsgI GTGCAG 2 cut(s) 696, 1058
Bsh1236I CGCG 1 cut(s) 117
BshFI GGCC 3 cut(s) 478, 614, 927
BshNI GGYRCC 1 cut(s) 597
BsiHKAI GWGCWC 1 cut(s) 192
BsiSI CCGG 1 cut(s) 1460
BslFI GGGAC 1 cut(s) 1215
BslI CCNNNNNNNGG 1 cut(s) 1466
BsmAI GTCTC 1 cut(s) 931
BsmFI GGGAC 1 cut(s) 1215
BsmI GAATGC 2 cut(s) 197, 400
BsnI GGCC 3 cut(s) 478, 614, 927
Bsp1286I GDGCHC 1 cut(s) 192
Bsp143I GATC 3 cut(s) 793, 1123, 1141
Bsp19I CCATGG 1 cut(s) 609
Bsp68I TCGCGA 1 cut(s) 117
BspACI CCGC 1 cut(s) 1693
BspANI GGCC 3 cut(s) 478, 614, 927
BspCNI CTCAG 3 cut(s) 587, 718, 865
BspFNI CGCG 1 cut(s) 117
BspHI TCATGA 2 cut(s) 165, 1374
BspLI GGNNCC 1 cut(s) 599
BspMAI CTGCAG 2 cut(s) 1051, 1261
BspMI ACCTGC 2 cut(s) 569, 1030
BspOI GCTAGC 2 cut(s) 1509, 1581
BspPI GGATC 1 cut(s) 1118
BspQI GCTCTTC 1 cut(s) 87
BspT107I GGYRCC 1 cut(s) 597
BspTI CTTAAG 1 cut(s) 1169
BsrDI GCAATG 2 cut(s) 270, 1405
BsrI ACTGG 7 cut(s) 411, 629, 996, 1201, 1302, 1365, 1572
BssECI CCNNGG 1 cut(s) 609
BssMI GATC 3 cut(s) 793, 1123, 1141
BssNI GRCGYC 1 cut(s) 598
BssT1I CCWWGG 1 cut(s) 609
Bst2UI CCWGG 3 cut(s) 220, 865, 1086
Bst4CI ACNGT 3 cut(s) 429, 1189, 1214
Bst6I CTCTTC 3 cut(s) 87, 164, 651
BstACI GRCGYC 1 cut(s) 598
BstAFI CTTAAG 1 cut(s) 1169
BstC8I GCNNGC 4 cut(s) 309, 679, 1507, 1579
BstDEI CTNAG 6 cut(s) 473, 574, 726, 873, 1394, 1731
BstDSI CCRYGG 1 cut(s) 609
BstF5I GGATG 2 cut(s) 159, 691
BstFNI CGCG 1 cut(s) 117
BstH2I RGCGCY 1 cut(s) 601
BstHHI GCGC 2 cut(s) 307, 600
BstKTI GATC 3 cut(s) 796, 1126, 1144
BstMAI GTCTC 1 cut(s) 931
BstMBI GATC 3 cut(s) 793, 1123, 1141
BstMWI GCNNNNNNNGC 3 cut(s) 323, 1419, 1692
BstNI CCWGG 3 cut(s) 220, 865, 1086
BstNSI RCATGY 1 cut(s) 1480
BstSCI CCNGG 3 cut(s) 218, 863, 1084
BstSFI CTRYAG 4 cut(s) 972, 1047, 1128, 1257
BstUI CGCG 1 cut(s) 117
BstV1I GCAGC 6 cut(s) 1449, 1485, 1521, 1668, 1698, 1701
BstV2I GAAGAC 1 cut(s) 84
BstX2I RGATCY 1 cut(s) 1123
BstYI RGATCY 1 cut(s) 1123
BsuI GTATCC 1 cut(s) 23
BsuRI GGCC 3 cut(s) 478, 614, 927
BtgI CCRYGG 1 cut(s) 609
BtsCI GGATG 2 cut(s) 159, 691
BtsI GCAGTG 1 cut(s) 1552
BtsIMutI CAGTG 3 cut(s) 1219, 1358, 1552
BtuMI TCGCGA 1 cut(s) 117
BveI ACCTGC 2 cut(s) 569, 1030
Cac8I GCNNGC 4 cut(s) 309, 679, 1507, 1579
CciI TCATGA 2 cut(s) 165, 1374
CfoI GCGC 2 cut(s) 307, 600
Csp6I GTAC 3 cut(s) 404, 757, 1539
CviAII CATG 8 cut(s) 166, 592, 610, 709, 1243, 1375, 1405, 1477
CviQI GTAC 3 cut(s) 404, 757, 1539
DdeI CTNAG 6 cut(s) 473, 574, 726, 873, 1394, 1731
DinI GGCGCC 1 cut(s) 599
DpnI GATC 3 cut(s) 795, 1125, 1143
DpnII GATC 3 cut(s) 793, 1123, 1141
EaeI YGGCCR 1 cut(s) 612
Eam1104I CTCTTC 3 cut(s) 87, 164, 651
EarI CTCTTC 3 cut(s) 87, 164, 651
Eco130I CCWWGG 1 cut(s) 609
Eco147I AGGCCT 1 cut(s) 927
EcoRI GAATTC 1 cut(s) 1021
EcoRII CCWGG 3 cut(s) 218, 863, 1084
EcoT14I CCWWGG 1 cut(s) 609
EgeI GGCGCC 1 cut(s) 599
EheI GGCGCC 1 cut(s) 599
ErhI CCWWGG 1 cut(s) 609
FaeI CATG 8 cut(s) 169, 595, 613, 712, 1246, 1378, 1408, 1480
FalI AAGNNNNNCTT 4 cut(s) 69, 101, 186, 218
FaqI GGGAC 1 cut(s) 1215
FatI CATG 8 cut(s) 165, 591, 609, 708, 1242, 1374, 1404, 1476
FbaI TGATCA 1 cut(s) 793
FblI GTMKAC 1 cut(s) 975
Fnu4HI GCNGC 7 cut(s) 1438, 1474, 1510, 1657, 1687, 1690, 1693
FokI GGATG 2 cut(s) 166, 698
Fsp4HI GCNGC 7 cut(s) 1438, 1474, 1510, 1657, 1687, 1690, 1693
FspBI CTAG 8 cut(s) 284, 288, 636, 777, 1434, 1506, 1542, 1578
GlaI GCGC 2 cut(s) 306, 599
GluI GCNGC 7 cut(s) 1438, 1474, 1510, 1657, 1687, 1690, 1693
GsuI CTGGAG 2 cut(s) 1068, 1140
HaeII RGCGCY 1 cut(s) 601
HaeIII GGCC 3 cut(s) 478, 614, 927
HapII CCGG 1 cut(s) 1460
HhaI GCGC 2 cut(s) 307, 600
Hin1I GRCGYC 1 cut(s) 598
Hin1II CATG 8 cut(s) 169, 595, 613, 712, 1246, 1378, 1408, 1480
Hin6I GCGC 2 cut(s) 305, 598
HinP1I GCGC 2 cut(s) 305, 598
HindIII AAGCTT 1 cut(s) 1178
HinfI GANTC 4 cut(s) 346, 572, 914, 1378
HpaII CCGG 1 cut(s) 1460
HphI GGTGA 6 cut(s) 515, 593, 1076, 1342, 1420, 1625
Hpy166II GTNNAC 2 cut(s) 976, 1738
Hpy188I TCNGA 7 cut(s) 444, 543, 874, 1027, 1156, 1453, 1720
Hpy188III TCNNGA 9 cut(s) 116, 166, 391, 467, 797, 819, 1375, 1382, 1669
Hpy8I GTNNAC 2 cut(s) 976, 1738
HpyAV CCTTC 7 cut(s) 578, 770, 812, 904, 1055, 1598, 1599
HpyCH4III ACNGT 3 cut(s) 429, 1189, 1214
HpyCH4V TGCA 9 cut(s) 248, 275, 311, 551, 677, 1039, 1049, 1259, 1598
HpyF10VI GCNNNNNNNGC 3 cut(s) 323, 1419, 1692
HpyF3I CTNAG 6 cut(s) 473, 574, 726, 873, 1394, 1731
Hsp92I GRCGYC 1 cut(s) 598
Hsp92II CATG 8 cut(s) 169, 595, 613, 712, 1246, 1378, 1408, 1480
HspAI GCGC 2 cut(s) 305, 598
KasI GGCGCC 1 cut(s) 597
Ksp22I TGATCA 1 cut(s) 793
Kzo9I GATC 3 cut(s) 793, 1123, 1141
LguI GCTCTTC 1 cut(s) 87
LmnI GCTCC 1 cut(s) 1664
Lsp1109I GCAGC 6 cut(s) 1449, 1485, 1521, 1668, 1698, 1701
LweI GCATC 3 cut(s) 1256, 1422, 1590
MaeI CTAG 8 cut(s) 284, 288, 636, 777, 1434, 1506, 1542, 1578
MaeIII GTNAC 2 cut(s) 423, 1330
MalI GATC 3 cut(s) 795, 1125, 1143
MboI GATC 3 cut(s) 793, 1123, 1141
MfeI CAATTG 2 cut(s) 363, 1593
MflI RGATCY 1 cut(s) 1123
MhlI GDGCHC 1 cut(s) 192
MlsI TGGCCA 1 cut(s) 614
MluNI TGGCCA 1 cut(s) 614
Mly113I GGCGCC 1 cut(s) 598
MlyI GAGTC 3 cut(s) 355, 566, 1387
MmeI TCCRAC 1 cut(s) 715
Mox20I TGGCCA 1 cut(s) 614
MroXI GAANNNNTTC 2 cut(s) 161, 462
MscI TGGCCA 1 cut(s) 614
MseI TTAA 9 cut(s) 41, 383, 618, 899, 963, 1170, 1182, 1488, 1725
MslI CAYNNNNRTG 1 cut(s) 148
Msp20I TGGCCA 1 cut(s) 614
MspCI CTTAAG 1 cut(s) 1169
MspI CCGG 1 cut(s) 1460
MspR9I CCNGG 3 cut(s) 220, 865, 1086
MunI CAATTG 2 cut(s) 363, 1593
Mva1269I GAATGC 2 cut(s) 197, 400
MvaI CCWGG 3 cut(s) 220, 865, 1086
MvnI CGCG 1 cut(s) 117
MwoI GCNNNNNNNGC 3 cut(s) 323, 1419, 1692
NarI GGCGCC 1 cut(s) 598
NcoI CCATGG 1 cut(s) 609
NdeII GATC 3 cut(s) 793, 1123, 1141
NheI GCTAGC 2 cut(s) 1505, 1577
NlaIII CATG 8 cut(s) 169, 595, 613, 712, 1246, 1378, 1408, 1480
NlaIV GGNNCC 1 cut(s) 599
NmeAIII GCCGAG 1 cut(s) 534
NmuCI GTSAC 2 cut(s) 423, 1330
NruI TCGCGA 1 cut(s) 117
NspI RCATGY 1 cut(s) 1480
PagI TCATGA 2 cut(s) 165, 1374
PaqCI CACCTGC 1 cut(s) 569
PceI AGGCCT 1 cut(s) 927
PciSI GCTCTTC 1 cut(s) 87
PctI GAATGC 2 cut(s) 197, 400
PdmI GAANNNNTTC 2 cut(s) 161, 462
PfeI GAWTC 1 cut(s) 914
PfoI TCCNGGA 1 cut(s) 1084
PkrI GCNGC 7 cut(s) 1439, 1475, 1511, 1658, 1688, 1691, 1694
PleI GAGTC 3 cut(s) 354, 566, 1386
PluTI GGCGCC 1 cut(s) 601
PpsI GAGTC 3 cut(s) 354, 566, 1386
Psp6I CCWGG 3 cut(s) 218, 863, 1084
PspGI CCWGG 3 cut(s) 218, 863, 1084
PspN4I GGNNCC 1 cut(s) 599
PstI CTGCAG 2 cut(s) 1051, 1261
PsuI RGATCY 1 cut(s) 1123
RruI TCGCGA 1 cut(s) 117
RsaI GTAC 3 cut(s) 405, 758, 1540
RsaNI GTAC 3 cut(s) 404, 757, 1539
RseI CAYNNNNRTG 1 cut(s) 148
SapI GCTCTTC 1 cut(s) 87
SaqAI TTAA 9 cut(s) 41, 383, 618, 899, 963, 1170, 1182, 1488, 1725
SatI GCNGC 7 cut(s) 1438, 1474, 1510, 1657, 1687, 1690, 1693
Sau3AI GATC 3 cut(s) 793, 1123, 1141
SchI GAGTC 3 cut(s) 355, 566, 1387
ScrFI CCNGG 3 cut(s) 220, 865, 1086
SduI GDGCHC 1 cut(s) 192
SfaNI GCATC 3 cut(s) 1256, 1422, 1590
SfcI CTRYAG 4 cut(s) 972, 1047, 1128, 1257
SfoI GGCGCC 1 cut(s) 599
SmiMI CAYNNNNRTG 1 cut(s) 148
SmlI CTYRAG 3 cut(s) 86, 715, 1169
SmoI CTYRAG 3 cut(s) 86, 715, 1169
SseBI AGGCCT 1 cut(s) 927
SsiI CCGC 1 cut(s) 1693
SspDI GGCGCC 1 cut(s) 597
SspI AATATT 2 cut(s) 1070, 1279
SspMI CTAG 8 cut(s) 284, 288, 636, 777, 1434, 1506, 1542, 1578
StuI AGGCCT 1 cut(s) 927
StyD4I CCNGG 3 cut(s) 218, 863, 1084
StyI CCWWGG 1 cut(s) 609
TaaI ACNGT 3 cut(s) 429, 1189, 1214
TaqI TCGA 3 cut(s) 520, 930, 950
TatI WGTACW 2 cut(s) 403, 1538
TauI GCSGC 1 cut(s) 1695
TfiI GAWTC 1 cut(s) 914
Tru1I TTAA 9 cut(s) 41, 383, 618, 899, 963, 1170, 1182, 1488, 1725
Tru9I TTAA 9 cut(s) 41, 383, 618, 899, 963, 1170, 1182, 1488, 1725
TscAI CASTG 3 cut(s) 1219, 1358, 1552
TseFI GTSAC 2 cut(s) 423, 1330
TseI GCWGC 6 cut(s) 1437, 1473, 1509, 1656, 1686, 1689
Tsp45I GTSAC 2 cut(s) 423, 1330
TspGWI ACGGA 3 cut(s) 795, 849, 1069
TspRI CASTG 3 cut(s) 1219, 1358, 1552
Vha464I CTTAAG 1 cut(s) 1169
XapI RAATTY 1 cut(s) 1021
XceI RCATGY 1 cut(s) 1480
XcmI CCANNNNNNNNNTGG 1 cut(s) 1240
XmiI GTMKAC 1 cut(s) 975
XmnI GAANNNNTTC 2 cut(s) 161, 462
XspI CTAG 8 cut(s) 284, 288, 636, 777, 1434, 1506, 1542, 1578
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.