DDE superfamily endonuclease
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 29 |
| AcsI | RAATTY | 1 cut(s) | 430 |
| AcuI | CTGAAG | 1 cut(s) | 177 |
| AdeI | CACNNNGTG | 1 cut(s) | 77 |
| AfaI | GTAC | 1 cut(s) | 221 |
| AflIII | ACRYGT | 1 cut(s) | 98 |
| AgsI | TTSAA | 6 cut(s) | 178, 209, 236, 280, 310, 389 |
| AluBI | AGCT | 1 cut(s) | 383 |
| AluI | AGCT | 1 cut(s) | 383 |
| ApeKI | GCWGC | 1 cut(s) | 163 |
| ApoI | RAATTY | 1 cut(s) | 430 |
| BbvI | GCAGC | 1 cut(s) | 175 |
| BfaI | CTAG | 2 cut(s) | 60, 75 |
| BisI | GCNGC | 1 cut(s) | 164 |
| BlsI | GCNGC | 1 cut(s) | 165 |
| Bsa29I | ATCGAT | 1 cut(s) | 151 |
| BseCI | ATCGAT | 1 cut(s) | 151 |
| BseXI | GCAGC | 1 cut(s) | 175 |
| BsgI | GTGCAG | 2 cut(s) | 135, 182 |
| BshVI | ATCGAT | 1 cut(s) | 151 |
| Bsp143I | GATC | 2 cut(s) | 148, 152 |
| BspACI | CCGC | 1 cut(s) | 29 |
| BspDI | ATCGAT | 1 cut(s) | 151 |
| BssMI | GATC | 2 cut(s) | 148, 152 |
| Bst4CI | ACNGT | 1 cut(s) | 190 |
| BstKTI | GATC | 2 cut(s) | 151, 155 |
| BstMBI | GATC | 2 cut(s) | 148, 152 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 47 |
| BstNSI | RCATGY | 1 cut(s) | 102 |
| BstV1I | GCAGC | 1 cut(s) | 175 |
| Bsu15I | ATCGAT | 1 cut(s) | 151 |
| BsuTUI | ATCGAT | 1 cut(s) | 151 |
| ClaI | ATCGAT | 1 cut(s) | 151 |
| Csp6I | GTAC | 1 cut(s) | 220 |
| CviAII | CATG | 1 cut(s) | 99 |
| CviJI | RGCY | 4 cut(s) | 7, 70, 166, 383 |
| CviKI_1 | RGCY | 4 cut(s) | 7, 70, 166, 383 |
| CviQI | GTAC | 1 cut(s) | 220 |
| DpnI | GATC | 2 cut(s) | 150, 154 |
| DpnII | GATC | 2 cut(s) | 148, 152 |
| DraI | TTTAAA | 1 cut(s) | 402 |
| DraIII | CACNNNGTG | 1 cut(s) | 77 |
| Eco57I | CTGAAG | 1 cut(s) | 177 |
| EcoRI | GAATTC | 1 cut(s) | 430 |
| FaeI | CATG | 1 cut(s) | 102 |
| FatI | CATG | 1 cut(s) | 98 |
| Fnu4HI | GCNGC | 1 cut(s) | 164 |
| Fsp4HI | GCNGC | 1 cut(s) | 164 |
| FspBI | CTAG | 2 cut(s) | 60, 75 |
| GluI | GCNGC | 1 cut(s) | 164 |
| Hin1II | CATG | 1 cut(s) | 102 |
| Hpy166II | GTNNAC | 1 cut(s) | 412 |
| Hpy188I | TCNGA | 1 cut(s) | 157 |
| Hpy8I | GTNNAC | 1 cut(s) | 412 |
| HpyCH4III | ACNGT | 1 cut(s) | 190 |
| HpyCH4V | TGCA | 3 cut(s) | 50, 116, 163 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 47 |
| Hsp92II | CATG | 1 cut(s) | 102 |
| Kzo9I | GATC | 2 cut(s) | 148, 152 |
| LpnPI | CCDG | 1 cut(s) | 429 |
| Lsp1109I | GCAGC | 1 cut(s) | 175 |
| MaeI | CTAG | 2 cut(s) | 60, 75 |
| MalI | GATC | 2 cut(s) | 150, 154 |
| MboI | GATC | 2 cut(s) | 148, 152 |
| MboII | GAAGA | 1 cut(s) | 426 |
| MluCI | AATT | 4 cut(s) | 53, 280, 360, 430 |
| MmeI | TCCRAC | 2 cut(s) | 221, 236 |
| MnlI | CCTC | 2 cut(s) | 334, 343 |
| MseI | TTAA | 1 cut(s) | 401 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 47 |
| NdeII | GATC | 2 cut(s) | 148, 152 |
| NlaIII | CATG | 1 cut(s) | 102 |
| NspI | RCATGY | 1 cut(s) | 102 |
| PciI | ACATGT | 1 cut(s) | 98 |
| PkrI | GCNGC | 1 cut(s) | 165 |
| PscI | ACATGT | 1 cut(s) | 98 |
| RsaI | GTAC | 1 cut(s) | 221 |
| RsaNI | GTAC | 1 cut(s) | 220 |
| SaqAI | TTAA | 1 cut(s) | 401 |
| SatI | GCNGC | 1 cut(s) | 164 |
| Sau3AI | GATC | 2 cut(s) | 148, 152 |
| SetI | ASST | 5 cut(s) | 76, 302, 323, 385, 448 |
| SgeI | CNNG | 8 cut(s) | 72, 87, 111, 137, 183, 229, 279, 456 |
| Sse9I | AATT | 4 cut(s) | 53, 280, 360, 430 |
| SsiI | CCGC | 1 cut(s) | 29 |
| SspI | AATATT | 1 cut(s) | 451 |
| SspMI | CTAG | 2 cut(s) | 60, 75 |
| TaaI | ACNGT | 1 cut(s) | 190 |
| TaqI | TCGA | 1 cut(s) | 151 |
| TasI | AATT | 4 cut(s) | 53, 280, 360, 430 |
| TatI | WGTACW | 1 cut(s) | 219 |
| Tru1I | TTAA | 1 cut(s) | 401 |
| Tru9I | TTAA | 1 cut(s) | 401 |
| TseI | GCWGC | 1 cut(s) | 163 |
| TspDTI | ATGAA | 3 cut(s) | 158, 329, 443 |
| TspGWI | ACGGA | 1 cut(s) | 411 |
| XapI | RAATTY | 1 cut(s) | 430 |
| XceI | RCATGY | 1 cut(s) | 102 |
| XspI | CTAG | 2 cut(s) | 60, 75 |