Rorug05G0104000
MYB Family

Myb/SANT-like DNA-binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000240
Physical Location & Seq
Reverse (-)
9148865 .. 9152966
4102 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0104000.1

Sequence Viewer

Length: 1182 bp
ATGGGTCGGAGCTCCGCAACACCCAAATGGGTCTTACCGTTCATGCTTGTTCTTGGTTCTCTGGCTTCTCAAATCTCAGCTTTAGATGGACCACTACCAAACGGAGATTTTGAGGCAACTCCAACAGGCGGTTTCTCCAGTGACGCCATAGTAGACGGGCCCACAGGGATTCCCAGCTGGAAATCAAACGGCACCGTTGAGCTAGTCGAGTCCGGGCAAAAACAGGGTGGGATGATCCTCATCGTACCGCAAGGTAGACACGCAGTCCGGCTCGGAAACGACGCCGAAGTGAGCCAGGACATCAAGGTGGAGAAGGGGTCGATCTACTCCGTCACGTTCAGCGCGGCTCGCACGTGCGCGCAGCTGGAGTCGCTGAACGTGTCGGTGCTGCCCGCGTCGCAGACGATAGACCTGCAGACATTGTACAACGTGCAGGGGTGGGACCCTTACGCGTGGGCTTTTGAGGCTGAAGAGGATGATGTGAACCTAGTGTTTAGGAATCCGGGGATGGAGGACGACCCTACTTGTGGGCCCATCATTGATGACGTTGCTATCAAGAAGCTCTTTACCCCTGATAAGCCCAAAAACAATGCAGTGGTTAATGGTGATTTTGAGGAAGGTCCATGGATGCTTGCAAACATCTCTTTAGGAGTGCTCCTTCCTACAAACCTCGATGAAGAAACATCGTCCTTACCGGGTTGGAATGTTGAATCCAACCGGGCTGTTCGTTACATCGACTCCTACCACTTCAGTGTGCCACAGGGCAAGAGAGCGATAGAATTGCTTTCTGGGAAGGAAGGCATCATTTCCCAAATGGTTGAAACTAAACCGAACAAGCCATATACCCTCACCTTCTCTTTAGGCCATGCCAATGACAAATGCAAGCAGCCTCTTGCTGTCATGGCCTTTGCCGGCGACCAAGCCCAAAATGTCCATTACACCCCTAATTCCAACAGCACATTCCAAAGTGCCAATGTGAATTTCACTGCCAAAGCTGAGAGGTCAAGGATTGCATTCTACAGTGTGTACTATAACACAAGGACTGATGATATGAGCTCACTGTGTGGACCTGTGGTTGATGATGTTAGGGTTTGGTTTTCAGGGTCAAGGAGAAATGGGCTTGGAGGGTTGGGCCTAAGGCTTGGGGTGGCTTTGTGGGTTTTTGTGTTGTTTTTGGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-bind_3

Protein Analysis

393

Amino Acids

42.66

Weight (kDa)

4.88

Isoelectric Point (pI)

38.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF642 PF04862 31 - 186 2.4e-65 Protein of unknown function (DUF642)
DUF642 PF04862 199 - 364 5.4e-20 Protein of unknown function (DUF642)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000240)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G11300
fragaria_vesca FvH4_1g19130 FvH4_1g28413 FvH4_2g11122 FvH4_3g19652 FvH4_3g29921 FvH4_4g07761 FvH4_4g20923 FvH4_5g23913 FvH4_5g23913 FvH4_6g38850 FvH4_6g39920 FvH4_6g53022 FvH4_7g00070 FvH4_7g08972 FvH4_7g12221
malus_domestica MD06G1090800.v1.1 MD15G1314200.v1.1 MD16G1231800.v1.1
prunus_persica Prupe.1G173000_v2.0.a1 Prupe.4G113600_v2.0.a1 Prupe.5G020800_v2.0.a1 Prupe.5G020800_v2.0.a1 Prupe.5G020800_v2.0.a1 Prupe.5G207000_v2.0.a1 Prupe.6G155900_v2.0.a1 Prupe.8G016500_v2.0.a1
pyrus_communis pycom03g16230 pycom04g16130 pycom05g03970 pycom05g10500 pycom08g06480 pycom08g11770 pycom12g11350 pycom12g18510 pycom13g02550 pycom13g13780 pycom13g27450 pycom13g27460 pycom15g26130 pycom15g27470
rosa_chinensis RchiOBHm_Chr2g0103961 RchiOBHm_Chr2g0128681 RchiOBHm_Chr2g0153151 RchiOBHm_Chr3g0459461 RchiOBHm_Chr4g0406011 RchiOBHm_Chr4g0428601 RchiOBHm_Chr5g0029731 RchiOBHm_Chr5g0069971 RchiOBHm_Chr6g0253171 RchiOBHm_Chr6g0254701 RchiOBHm_Chr7g0199281
rosa_laevigata RLG00000002281 RLG00000007586 RLG00000008509 RLG00000008888 RLG00000009501 RLG00000012763
rosa_multiflora Rmu_sc0000008.1_g000009 Rmu_sc0000079.1_g000058 Rmu_sc0000117.1_g000008 Rmu_sc0000151.1_g000009 Rmu_sc0000166.1_g000053 Rmu_sc0000240.1_g000064 Rmu_sc0000435.1_g000013 Rmu_sc0000552.1_g000019 Rmu_sc0000776.1_g000078 Rmu_sc0001597.1_g000012 Rmu_sc0001759.1_g000017 Rmu_sc0002137.1_g000011 Rmu_sc0002933.1_g000006 Rmu_sc0002938.1_g000049 Rmu_sc0003257.1_g000014 Rmu_sc0003465.1_g000054 Rmu_sc0003505.1_g000025 Rmu_sc0003526.1_g000016 Rmu_sc0003829.1_g000021 Rmu_sc0003855.1_g000002 Rmu_sc0005514.1_g000003 Rmu_sc0005514.1_g000004 Rmu_sc0007820.1_g000001 Rmu_sc0008322.1_g000016 Rmu_sc0008636.1_g000003 Rmu_sc0008812.1_g000009 Rmu_sc0010960.1_g000003 Rmu_sc0011753.1_g000001 Rmu_sc0013017.1_g000001 Rmu_sc0013176.1_g000005 Rmu_sc0015928.1_g000001 Rmu_sc0020751.1_g000003 Rmu_sc0038865.1_g000001 Rmu_ssc0000089.1_g000008 Rmu_ssc0000164.1_g000007 Rmu_ssc0000388.1_g000013 Rmu_ssc0000400.1_g000076 Rmu_ssc0000486.1_g000012
rosa_roxburghii Rroxscaffold_1G00005880 Rroxscaffold_1G00051030 Rroxscaffold_2G00107440 Rroxscaffold_2G00115370 Rroxscaffold_2G00115870 Rroxscaffold_2G00146360 Rroxscaffold_3G00228870 Rroxscaffold_3G00230350 Rroxscaffold_3G00246190 Rroxscaffold_6G00423350 Rroxscaffold_7G00157820 Rroxscaffold_7G00184840 Rroxscaffold_7G00186490
rosa_rugosa Rorug02G0248700 Rorug02G0279900 Rorug02G0285600 Rorug02G0285700 Rorug03G0068700 Rorug03G0077100 Rorug03G0247700 Rorug03G0304800 Rorug04G0059600 Rorug05G0104000 Rorug05G0104000 Rorug05G0192000 Rorug05G0247800 Rorug05G0248000 Rorug06G0064100 Rorug06G0244800
rosa_samantha Rh4BG200400 Rh4CG094600 Rh4CG114400 Rh5BG465300 Rh6AG057500
rosa_wichuraiana Rw1G014470 Rw2G026930 Rw5G042730 Rw6G021090 Rw6G022960 Rw6G025470 Rw6G034450 Rw7G034300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 420
AccB1I GGYRCC 1 cut(s) 191
AccI GTMKAC 2 cut(s) 153, 256
AccII CGCG 4 cut(s) 344, 359, 395, 452
AciI CCGC 5 cut(s) 15, 129, 248, 344, 393
AclWI GGATC 1 cut(s) 229
AcsI RAATTY 1 cut(s) 979
AcuI CTGAAG 2 cut(s) 489, 733
AcvI CACGTG 1 cut(s) 354
AcyI GRCGYC 2 cut(s) 144, 282
AdeI CACNNNGTG 1 cut(s) 1064
AfaI GTAC 3 cut(s) 246, 425, 1028
AfiI CCNNNNNNNGG 2 cut(s) 128, 527
AflIII ACRYGT 2 cut(s) 378, 450
AgsI TTSAA 2 cut(s) 710, 821
AhdI GACNNNNNGTC 1 cut(s) 263
AjnI CCWGG 1 cut(s) 294
AjuI GAANNNNNNNTTGG 4 cut(s) 944, 965, 976, 997
AleI CACNNNNGTG 1 cut(s) 750
AluBI AGCT 8 cut(s) 12, 80, 177, 202, 364, 562, 995, 1056
AluI AGCT 8 cut(s) 12, 80, 177, 202, 364, 562, 995, 1056
Alw21I GWGCWC 3 cut(s) 14, 657, 1058
AlwI GGATC 1 cut(s) 229
AoxI GGCC 5 cut(s) 158, 530, 862, 903, 1132
ApaI GGGCCC 2 cut(s) 162, 534
ApeKI GCWGC 3 cut(s) 361, 388, 886
ApoI RAATTY 1 cut(s) 979
AspLEI GCGC 3 cut(s) 344, 359, 361
AspS9I GGNCC 9 cut(s) 89, 158, 159, 442, 530, 531, 620, 1067, 1132
AsuC2I CCSGG 4 cut(s) 214, 504, 696, 719
AsuHPI GGTGA 2 cut(s) 617, 841
AvaII GGWCC 4 cut(s) 89, 442, 620, 1067
AxyI CCTNAGG 1 cut(s) 1136
BaeGI GKGCMC 2 cut(s) 162, 534
BanI GGYRCC 1 cut(s) 191
BanII GRGCYC 4 cut(s) 14, 162, 534, 1058
BbrPI CACGTG 1 cut(s) 354
Bbv12I GWGCWC 3 cut(s) 14, 657, 1058
BbvI GCAGC 3 cut(s) 373, 375, 898
BccI CCATC 3 cut(s) 80, 502, 542
BceAI ACGGC 1 cut(s) 205
BcgI CGANNNNNNTGC 4 cut(s) 394, 428, 763, 797
BciT130I CCWGG 1 cut(s) 296
BcnI CCSGG 4 cut(s) 214, 504, 696, 719
BfaI CTAG 2 cut(s) 203, 488
BfmI CTRYAG 2 cut(s) 413, 1018
BfuAI ACCTGC 1 cut(s) 420
BisI GCNGC 4 cut(s) 345, 362, 389, 887
BlsI GCNGC 4 cut(s) 346, 363, 390, 888
Bme1390I CCNGG 5 cut(s) 214, 296, 504, 696, 719
Bme18I GGWCC 4 cut(s) 89, 442, 620, 1067
BmeRI GACNNNNNGTC 1 cut(s) 263
BmgT120I GGNCC 9 cut(s) 89, 158, 159, 442, 530, 531, 620, 1067, 1132
BmiI GGNNCC 5 cut(s) 160, 193, 443, 444, 532
BmrFI CCNGG 5 cut(s) 214, 296, 504, 696, 719
BmsI GCATC 2 cut(s) 618, 810
BpmI CTGGAG 2 cut(s) 121, 386
BpuMI CCSGG 4 cut(s) 214, 504, 696, 719
BsaAI YACGTR 1 cut(s) 354
BsaBI GATNNNNATC 1 cut(s) 239
BsaHI GRCGYC 2 cut(s) 144, 282
BsaJI CCNNGG 2 cut(s) 503, 623
BsaXI ACNNNNNCTCC 4 cut(s) 302, 332, 722, 752
Bsc4I CCNNNNNNNGG 2 cut(s) 128, 527
Bse118I RCCGGY 1 cut(s) 911
Bse1I ACTGG 1 cut(s) 138
Bse21I CCTNAGG 1 cut(s) 1136
Bse8I GATNNNNATC 1 cut(s) 239
BseBI CCWGG 1 cut(s) 296
BseDI CCNNGG 2 cut(s) 503, 623
BseGI GGATG 4 cut(s) 237, 481, 513, 633
BseJI GATNNNNATC 1 cut(s) 239
BseLI CCNNNNNNNGG 2 cut(s) 128, 527
BseMII CTCAG 2 cut(s) 90, 987
BseNI ACTGG 1 cut(s) 138
BsePI GCGCGC 1 cut(s) 357
BseSI GKGCMC 2 cut(s) 162, 534
BseXI GCAGC 3 cut(s) 373, 375, 898
BseYI CCCAGC 1 cut(s) 173
BsgI GTGCAG 1 cut(s) 452
Bsh1236I CGCG 4 cut(s) 344, 359, 395, 452
BshFI GGCC 5 cut(s) 160, 532, 864, 905, 1134
BshNI GGYRCC 1 cut(s) 191
BsiHKAI GWGCWC 3 cut(s) 14, 657, 1058
BsiSI CCGG 6 cut(s) 213, 268, 503, 695, 718, 912
BslFI GGGAC 1 cut(s) 455
BslI CCNNNNNNNGG 2 cut(s) 128, 527
BsmFI GGGAC 1 cut(s) 455
BsmI GAATGC 1 cut(s) 1013
BsnI GGCC 5 cut(s) 160, 532, 864, 905, 1134
Bsp120I GGGCCC 2 cut(s) 158, 530
Bsp1286I GDGCHC 5 cut(s) 14, 162, 534, 657, 1058
Bsp1407I TGTACA 1 cut(s) 423
Bsp143I GATC 2 cut(s) 234, 321
Bsp19I CCATGG 1 cut(s) 623
BspACI CCGC 5 cut(s) 15, 129, 248, 344, 393
BspANI GGCC 5 cut(s) 160, 532, 864, 905, 1134
BspCNI CTCAG 2 cut(s) 89, 988
BspFNI CGCG 4 cut(s) 344, 359, 395, 452
BspLI GGNNCC 5 cut(s) 160, 193, 443, 444, 532
BspMAI CTGCAG 1 cut(s) 417
BspMI ACCTGC 1 cut(s) 420
BspPI GGATC 1 cut(s) 229
BspT107I GGYRCC 1 cut(s) 191
BsrFI RCCGGY 1 cut(s) 911
BsrGI TGTACA 1 cut(s) 423
BsrI ACTGG 1 cut(s) 138
BssAI RCCGGY 1 cut(s) 911
BssECI CCNNGG 2 cut(s) 503, 623
BssHII GCGCGC 1 cut(s) 357
BssMI GATC 2 cut(s) 234, 321
BssNI GRCGYC 2 cut(s) 144, 282
BssT1I CCWWGG 1 cut(s) 623
Bst2UI CCWGG 1 cut(s) 296
Bst4CI ACNGT 4 cut(s) 39, 196, 1022, 1062
Bst6I CTCTTC 1 cut(s) 465
BstACI GRCGYC 2 cut(s) 144, 282
BstAUI TGTACA 1 cut(s) 423
BstBAI YACGTR 1 cut(s) 354
BstC8I GCNNGC 6 cut(s) 349, 359, 393, 633, 884, 913
BstDEI CTNAG 3 cut(s) 76, 996, 1136
BstDSI CCRYGG 1 cut(s) 623
BstF5I GGATG 4 cut(s) 237, 481, 513, 633
BstFNI CGCG 4 cut(s) 344, 359, 395, 452
BstHHI GCGC 3 cut(s) 344, 359, 361
BstKTI GATC 2 cut(s) 237, 324
BstMBI GATC 2 cut(s) 234, 321
BstMWI GCNNNNNNNGC 5 cut(s) 348, 370, 397, 464, 902
BstNI CCWGG 1 cut(s) 296
BstSCI CCNGG 5 cut(s) 212, 294, 502, 694, 717
BstSFI CTRYAG 2 cut(s) 413, 1018
BstSLI GKGCMC 2 cut(s) 162, 534
BstUI CGCG 4 cut(s) 344, 359, 395, 452
BstV1I GCAGC 3 cut(s) 373, 375, 898
Bsu36I CCTNAGG 1 cut(s) 1136
BsuRI GGCC 5 cut(s) 160, 532, 864, 905, 1134
BtgI CCRYGG 1 cut(s) 623
BtsCI GGATG 4 cut(s) 237, 481, 513, 633
BtsI GCAGTG 2 cut(s) 600, 984
BtsIMutI CAGTG 6 cut(s) 145, 600, 757, 984, 1027, 1058
BveI ACCTGC 1 cut(s) 420
Cac8I GCNNGC 6 cut(s) 349, 359, 393, 633, 884, 913
CfoI GCGC 3 cut(s) 344, 359, 361
Cfr10I RCCGGY 1 cut(s) 911
Cfr13I GGNCC 9 cut(s) 89, 158, 159, 442, 530, 531, 620, 1067, 1132
CseI GACGC 3 cut(s) 152, 290, 384
Csp6I GTAC 3 cut(s) 245, 424, 1027
CviAII CATG 4 cut(s) 43, 624, 866, 901
CviQI GTAC 3 cut(s) 245, 424, 1027
DdeI CTNAG 3 cut(s) 76, 996, 1136
DpnI GATC 2 cut(s) 236, 323
DpnII GATC 2 cut(s) 234, 321
DraIII CACNNNGTG 1 cut(s) 1064
DriI GACNNNNNGTC 1 cut(s) 263
Eam1104I CTCTTC 1 cut(s) 465
Eam1105I GACNNNNNGTC 1 cut(s) 263
EarI CTCTTC 1 cut(s) 465
Ecl136II GAGCTC 2 cut(s) 12, 1056
Eco130I CCWWGG 1 cut(s) 623
Eco24I GRGCYC 4 cut(s) 14, 162, 534, 1058
Eco47I GGWCC 4 cut(s) 89, 442, 620, 1067
Eco53kI GAGCTC 2 cut(s) 12, 1056
Eco57I CTGAAG 2 cut(s) 489, 733
Eco72I CACGTG 1 cut(s) 354
Eco81I CCTNAGG 1 cut(s) 1136
EcoICRI GAGCTC 2 cut(s) 12, 1056
EcoO109I RGGNCCY 1 cut(s) 442
EcoRII CCWGG 1 cut(s) 294
EcoT14I CCWWGG 1 cut(s) 623
EcoT38I GRGCYC 4 cut(s) 14, 162, 534, 1058
ErhI CCWWGG 1 cut(s) 623
FaeI CATG 4 cut(s) 46, 627, 869, 904
FaiI YATR 9 cut(s) 44, 149, 625, 841, 843, 867, 902, 1032, 1052
FalI AAGNNNNNCTT 2 cut(s) 548, 580
FaqI GGGAC 1 cut(s) 455
FatI CATG 4 cut(s) 42, 623, 865, 900
FauI CCCGC 1 cut(s) 400
FblI GTMKAC 2 cut(s) 153, 256
Fnu4HI GCNGC 4 cut(s) 345, 362, 389, 887
FokI GGATG 4 cut(s) 244, 488, 520, 640
FriOI GRGCYC 4 cut(s) 14, 162, 534, 1058
Fsp4HI GCNGC 4 cut(s) 345, 362, 389, 887
FspBI CTAG 2 cut(s) 203, 488
GlaI GCGC 3 cut(s) 343, 358, 360
GluI GCNGC 4 cut(s) 345, 362, 389, 887
GsaI CCCAGC 1 cut(s) 177
GsuI CTGGAG 2 cut(s) 121, 386
HaeIII GGCC 5 cut(s) 160, 532, 864, 905, 1134
HapII CCGG 6 cut(s) 213, 268, 503, 695, 718, 912
HgaI GACGC 3 cut(s) 152, 290, 384
HhaI GCGC 3 cut(s) 344, 359, 361
Hin1I GRCGYC 2 cut(s) 144, 282
Hin1II CATG 4 cut(s) 46, 627, 869, 904
Hin6I GCGC 3 cut(s) 342, 357, 359
HinP1I GCGC 3 cut(s) 342, 357, 359
HinfI GANTC 6 cut(s) 169, 209, 368, 499, 710, 737
HpaII CCGG 6 cut(s) 213, 268, 503, 695, 718, 912
HphI GGTGA 2 cut(s) 617, 841
Hpy166II GTNNAC 5 cut(s) 154, 257, 484, 1027, 1067
Hpy188I TCNGA 2 cut(s) 9, 275
Hpy188III TCNNGA 1 cut(s) 556
Hpy8I GTNNAC 5 cut(s) 154, 257, 484, 1027, 1067
Hpy99I CGWCG 2 cut(s) 284, 400
HpyAV CCTTC 6 cut(s) 307, 611, 668, 787, 791, 862
HpyCH4III ACNGT 4 cut(s) 39, 196, 1022, 1062
HpyCH4IV ACGT 5 cut(s) 335, 353, 378, 429, 546
HpyCH4V TGCA 6 cut(s) 415, 433, 593, 635, 882, 1013
HpyF10VI GCNNNNNNNGC 5 cut(s) 348, 370, 397, 464, 902
HpyF3I CTNAG 3 cut(s) 76, 996, 1136
HpySE526I ACGT 5 cut(s) 335, 353, 378, 429, 546
Hsp92I GRCGYC 2 cut(s) 144, 282
Hsp92II CATG 4 cut(s) 46, 627, 869, 904
HspAI GCGC 3 cut(s) 342, 357, 359
KflI GGGWCCC 1 cut(s) 442
KroI GCCGGC 1 cut(s) 911
KroNI GCCGGC 1 cut(s) 913
Kzo9I GATC 2 cut(s) 234, 321
LmnI GCTCC 3 cut(s) 9, 17, 660
Lsp1109I GCAGC 3 cut(s) 373, 375, 898
LweI GCATC 2 cut(s) 618, 810
MaeI CTAG 2 cut(s) 203, 488
MaeII ACGT 5 cut(s) 335, 353, 378, 429, 546
MaeIII GTNAC 3 cut(s) 140, 331, 728
MalI GATC 2 cut(s) 236, 323
MboI GATC 2 cut(s) 234, 321
MboII GAAGA 2 cut(s) 482, 689
MhlI GDGCHC 5 cut(s) 14, 162, 534, 657, 1058
MluCI AATT 3 cut(s) 779, 946, 979
MluI ACGCGT 1 cut(s) 450
MlyI GAGTC 3 cut(s) 218, 377, 731
MmeI TCCRAC 4 cut(s) 146, 680, 738, 975
MroNI GCCGGC 1 cut(s) 911
MseI TTAA 1 cut(s) 600
MslI CAYNNNNRTG 4 cut(s) 25, 305, 750, 870
MspA1I CMGCKG 2 cut(s) 177, 364
MspI CCGG 6 cut(s) 213, 268, 503, 695, 718, 912
MspR9I CCNGG 5 cut(s) 214, 296, 504, 696, 719
Mva1269I GAATGC 1 cut(s) 1013
MvaI CCWGG 1 cut(s) 296
MvnI CGCG 4 cut(s) 344, 359, 395, 452
MwoI GCNNNNNNNGC 5 cut(s) 348, 370, 397, 464, 902
NaeI GCCGGC 1 cut(s) 913
NciI CCSGG 4 cut(s) 214, 504, 696, 719
NcoI CCATGG 1 cut(s) 623
NdeII GATC 2 cut(s) 234, 321
NgoMIV GCCGGC 1 cut(s) 911
NlaIII CATG 4 cut(s) 46, 627, 869, 904
NlaIV GGNNCC 5 cut(s) 160, 193, 443, 444, 532
NmuCI GTSAC 2 cut(s) 140, 331
OliI CACNNNNGTG 1 cut(s) 750
PauI GCGCGC 1 cut(s) 357
PctI GAATGC 1 cut(s) 1013
PdiI GCCGGC 1 cut(s) 913
PfeI GAWTC 3 cut(s) 169, 499, 710
PkrI GCNGC 4 cut(s) 346, 363, 390, 888
PleI GAGTC 3 cut(s) 217, 376, 731
PmaCI CACGTG 1 cut(s) 354
PmlI CACGTG 1 cut(s) 354
PpsI GAGTC 3 cut(s) 217, 376, 731
Ppu21I YACGTR 1 cut(s) 354
PpuMI RGGWCCY 1 cut(s) 442
Psp124BI GAGCTC 2 cut(s) 14, 1058
Psp5II RGGWCCY 1 cut(s) 442
Psp6I CCWGG 1 cut(s) 294
PspCI CACGTG 1 cut(s) 354
PspFI CCCAGC 1 cut(s) 173
PspGI CCWGG 1 cut(s) 294
PspN4I GGNNCC 5 cut(s) 160, 193, 443, 444, 532
PspOMI GGGCCC 2 cut(s) 158, 530
PspPI GGNCC 9 cut(s) 89, 158, 159, 442, 530, 531, 620, 1067, 1132
PspPPI RGGWCCY 1 cut(s) 442
PstI CTGCAG 1 cut(s) 417
PteI GCGCGC 1 cut(s) 357
PvuII CAGCTG 2 cut(s) 177, 364
RsaI GTAC 3 cut(s) 246, 425, 1028
RsaNI GTAC 3 cut(s) 245, 424, 1027
RseI CAYNNNNRTG 4 cut(s) 25, 305, 750, 870
SacI GAGCTC 2 cut(s) 14, 1058
SaqAI TTAA 1 cut(s) 600
SatI GCNGC 4 cut(s) 345, 362, 389, 887
Sau3AI GATC 2 cut(s) 234, 321
Sau96I GGNCC 9 cut(s) 89, 158, 159, 442, 530, 531, 620, 1067, 1132
SchI GAGTC 3 cut(s) 218, 377, 731
ScrFI CCNGG 5 cut(s) 214, 296, 504, 696, 719
SduI GDGCHC 5 cut(s) 14, 162, 534, 657, 1058
SfaNI GCATC 2 cut(s) 618, 810
SfcI CTRYAG 2 cut(s) 413, 1018
SinI GGWCC 4 cut(s) 89, 442, 620, 1067
SmiMI CAYNNNNRTG 4 cut(s) 25, 305, 750, 870
Sse9I AATT 3 cut(s) 779, 946, 979
SsiI CCGC 5 cut(s) 15, 129, 248, 344, 393
SspMI CTAG 2 cut(s) 203, 488
SstI GAGCTC 2 cut(s) 14, 1058
StyD4I CCNGG 5 cut(s) 212, 294, 502, 694, 717
StyI CCWWGG 1 cut(s) 623
TaaI ACNGT 4 cut(s) 39, 196, 1022, 1062
TaiI ACGT 5 cut(s) 338, 356, 381, 432, 549
TaqI TCGA 4 cut(s) 207, 320, 672, 735
TasI AATT 3 cut(s) 779, 946, 979
TatI WGTACW 2 cut(s) 423, 1026
TauI GCSGC 1 cut(s) 347
TfiI GAWTC 3 cut(s) 169, 499, 710
Tru1I TTAA 1 cut(s) 600
Tru9I TTAA 1 cut(s) 600
TscAI CASTG 6 cut(s) 145, 600, 757, 991, 1027, 1065
TseFI GTSAC 2 cut(s) 140, 331
TseI GCWGC 3 cut(s) 361, 388, 886
Tsp45I GTSAC 2 cut(s) 140, 331
TspDTI ATGAA 2 cut(s) 31, 690
TspGWI ACGGA 2 cut(s) 117, 319
TspRI CASTG 6 cut(s) 145, 600, 757, 991, 1027, 1065
VpaK11BI GGWCC 4 cut(s) 89, 442, 620, 1067
XapI RAATTY 1 cut(s) 979
XmiI GTMKAC 2 cut(s) 153, 256
XspI CTAG 2 cut(s) 203, 488
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.