Rmu_sc0000776.1_g000078
MYB Family

DDE superfamily endonuclease

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000776.1
OG0000240
Physical Location & Seq
Forward (+)
392210 .. 395410
3201 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000776.1_g000078.1.cds

Sequence Viewer

Length: 1611 bp
atggcaaacaagagtggaatacaggaaaaaggaaaggctacttggactgatcataatgtagatgtcttttgtgacctttgtatcaaggagattgagaaaggaagtcgtccaggtactcacctcacaccaaaaggttatgaaaatttgggcattaacttcgctaaagagacgggacttcaatatactaaatctcaattcaaaaataagtgggatttattaagagatcaatggaaattgtggaaagaactaattaggaaggagactggtttggggtggaaccccaaactgaaaactgtagatgcacctgatgaatggtggtgtagtaaaattcaggacaatcctgaatatgccaaattgcgtaaaaagggaattaaccctgaattggaagagaagctagatatgatgttccaacaagttactgcaagtggtgttcatgcttgggcaccatcttctggtgtacttccacctgatgatatagaagttaacaatgttgcagttccattagatagcgatgatgatttggcatgtcccattgaagtcattgccagttctttaggtaagaggaaaaggacaccaacaaaacaagttaatgcaggtactgagaaaaataataaagccaaaggtataggatcaagaaagattggaggtgcagctaagttagcaatacaaattgatcggatggtggaatcaattcaaactaggagcgccgtgacttcagtaatgaataaatgtgtgttggggacttctattgctgaagtgatgaaatcagtttcatctttacccggggcagagccagataactatggcttgactggttcaaagaacatatgtgctgctgagatagtgggaatgttcgtgcacatgttaggacatggtgttgggaataggttagcccaagaacgattccaacgttctggagagactgtgagtagatactttaggattgtcctagacagtgtatgtcgaatggctattgatgttataaagccgccggatcctgagttcaatgaaattcctgaggaaatatcaagagatacaagatatatgcctcattttaagaattgtatagggactattgatggtgtacatgtgtatgcctcaatacctcctcgagatcaaataccatatattggaaggaaaggcataccgactcaaaatataatggcggtgtgtaattttgacatgcaattcacttttgcatgtgccgggtgggaaggaactgcacatgatacaaggatatttctctcatctataaggaatgatgctctgaagtttcctaagcctcccaatgggaaatattatcttgtggatgctggttacccacaaatgaagggatatctaggaccttatagaggtggtgtgaggtatcatcttccacaatttcggtacggtggtgaacctaccggttctaaagaggggtaccaaatatcccactttgatgttccaactataaccggtggctacattgatttggacatactagtagagtttggtggtgggcataagaagtttggcattacaagacttcacatggaagatgatgcaaggaagcttattgattcagtcgacggaagttactcagaggaaagaacccatatttccttgcaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DDE_Tnp_4 Myb_DNA-bind_3

Protein Analysis

536

Amino Acids

59.75

Weight (kDa)

8.17

Isoelectric Point (pI)

32.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000240)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G11300
fragaria_vesca FvH4_1g19130 FvH4_1g28413 FvH4_2g11122 FvH4_3g19652 FvH4_3g29921 FvH4_4g07761 FvH4_4g20923 FvH4_5g23913 FvH4_5g23913 FvH4_6g38850 FvH4_6g39920 FvH4_6g53022 FvH4_7g00070 FvH4_7g08972 FvH4_7g12221
malus_domestica MD06G1090800.v1.1 MD15G1314200.v1.1 MD16G1231800.v1.1
prunus_persica Prupe.1G173000_v2.0.a1 Prupe.4G113600_v2.0.a1 Prupe.5G020800_v2.0.a1 Prupe.5G020800_v2.0.a1 Prupe.5G020800_v2.0.a1 Prupe.5G207000_v2.0.a1 Prupe.6G155900_v2.0.a1 Prupe.8G016500_v2.0.a1
pyrus_communis pycom03g16230 pycom04g16130 pycom05g03970 pycom05g10500 pycom08g06480 pycom08g11770 pycom12g11350 pycom12g18510 pycom13g02550 pycom13g13780 pycom13g27450 pycom13g27460 pycom15g26130 pycom15g27470
rosa_chinensis RchiOBHm_Chr2g0103961 RchiOBHm_Chr2g0128681 RchiOBHm_Chr2g0153151 RchiOBHm_Chr3g0459461 RchiOBHm_Chr4g0406011 RchiOBHm_Chr4g0428601 RchiOBHm_Chr5g0029731 RchiOBHm_Chr5g0069971 RchiOBHm_Chr6g0253171 RchiOBHm_Chr6g0254701 RchiOBHm_Chr7g0199281
rosa_laevigata RLG00000002281 RLG00000007586 RLG00000008509 RLG00000008888 RLG00000009501 RLG00000012763
rosa_multiflora Rmu_sc0000008.1_g000009 Rmu_sc0000079.1_g000058 Rmu_sc0000117.1_g000008 Rmu_sc0000151.1_g000009 Rmu_sc0000166.1_g000053 Rmu_sc0000240.1_g000064 Rmu_sc0000435.1_g000013 Rmu_sc0000552.1_g000019 Rmu_sc0000776.1_g000078 Rmu_sc0001597.1_g000012 Rmu_sc0001759.1_g000017 Rmu_sc0002137.1_g000011 Rmu_sc0002933.1_g000006 Rmu_sc0002938.1_g000049 Rmu_sc0003257.1_g000014 Rmu_sc0003465.1_g000054 Rmu_sc0003505.1_g000025 Rmu_sc0003526.1_g000016 Rmu_sc0003829.1_g000021 Rmu_sc0003855.1_g000002 Rmu_sc0005514.1_g000003 Rmu_sc0005514.1_g000004 Rmu_sc0007820.1_g000001 Rmu_sc0008322.1_g000016 Rmu_sc0008636.1_g000003 Rmu_sc0008812.1_g000009 Rmu_sc0010960.1_g000003 Rmu_sc0011753.1_g000001 Rmu_sc0013017.1_g000001 Rmu_sc0013176.1_g000005 Rmu_sc0015928.1_g000001 Rmu_sc0020751.1_g000003 Rmu_sc0038865.1_g000001 Rmu_ssc0000089.1_g000008 Rmu_ssc0000164.1_g000007 Rmu_ssc0000388.1_g000013 Rmu_ssc0000400.1_g000076 Rmu_ssc0000486.1_g000012
rosa_roxburghii Rroxscaffold_1G00005880 Rroxscaffold_1G00051030 Rroxscaffold_2G00107440 Rroxscaffold_2G00115370 Rroxscaffold_2G00115870 Rroxscaffold_2G00146360 Rroxscaffold_3G00228870 Rroxscaffold_3G00230350 Rroxscaffold_3G00246190 Rroxscaffold_6G00423350 Rroxscaffold_7G00157820 Rroxscaffold_7G00184840 Rroxscaffold_7G00186490
rosa_rugosa Rorug02G0248700 Rorug02G0279900 Rorug02G0285600 Rorug02G0285700 Rorug03G0068700 Rorug03G0077100 Rorug03G0247700 Rorug03G0304800 Rorug04G0059600 Rorug05G0104000 Rorug05G0104000 Rorug05G0192000 Rorug05G0247800 Rorug05G0248000 Rorug06G0064100 Rorug06G0244800
rosa_samantha Rh4BG200400 Rh4CG094600 Rh4CG114400 Rh5BG465300 Rh6AG057500
rosa_wichuraiana Rw1G014470 Rw2G026930 Rw5G042730 Rw6G021090 Rw6G022960 Rw6G025470 Rw6G034450 Rw7G034300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 983
Acc36I ACCTGC 1 cut(s) 584
Acc65I GGTACC 1 cut(s) 1419
AccB1I GGYRCC 2 cut(s) 442, 1419
AccB7I CCANNNNNTGG 2 cut(s) 452, 1130
AccI GTMKAC 1 cut(s) 1566
AciI CCGC 2 cut(s) 989, 1166
AclI AACGTT 1 cut(s) 910
AclWI GGATC 3 cut(s) 637, 989, 1002
AcsI RAATTY 3 cut(s) 142, 327, 1011
AcuI CTGAAG 3 cut(s) 699, 774, 1289
AfaI GTAC 6 cut(s) 115, 459, 598, 1086, 1388, 1421
AfiI CCNNNNNNNGG 5 cut(s) 382, 452, 1130, 1289, 1352
AflIII ACRYGT 2 cut(s) 861, 1087
AgeI ACCGGT 2 cut(s) 1403, 1454
AgsI TTSAA 6 cut(s) 179, 199, 536, 695, 819, 1006
AhlI ACTAGT 1 cut(s) 1480
AjnI CCWGG 1 cut(s) 109
AjuI GAANNNNNNNTTGG 2 cut(s) 25, 57
AloI GAACNNNNNNTCC 2 cut(s) 986, 1018
AluBI AGCT 3 cut(s) 394, 653, 1552
AluI AGCT 3 cut(s) 394, 653, 1552
Alw21I GWGCWC 1 cut(s) 861
Alw26I GTCTC 3 cut(s) 161, 254, 914
Alw44I GTGCAC 1 cut(s) 857
AlwI GGATC 3 cut(s) 637, 989, 1002
AlwNI CAGNNNCTG 1 cut(s) 599
Ama87I CYCGRG 2 cut(s) 782, 1110
ApaLI GTGCAC 1 cut(s) 857
ApeKI GCWGC 2 cut(s) 650, 833
ApoI RAATTY 3 cut(s) 142, 327, 1011
AsiGI ACCGGT 2 cut(s) 1403, 1454
Asp700I GAANNNNTTC 1 cut(s) 690
Asp718I GGTACC 1 cut(s) 1419
AspLEI GCGC 1 cut(s) 707
AspS9I GGNCC 1 cut(s) 1343
AsuC2I CCSGG 3 cut(s) 783, 784, 1207
AsuHPI GGTGA 2 cut(s) 110, 1406
AvaI CYCGRG 2 cut(s) 782, 1110
AvaII GGWCC 1 cut(s) 1343
AxyI CCTNAGG 1 cut(s) 1017
BaeGI GKGCMC 2 cut(s) 445, 861
BaeI ACNNNNGTAYC 4 cut(s) 64, 97, 1378, 1411
BamHI GGATCC 1 cut(s) 994
BanI GGYRCC 2 cut(s) 442, 1419
Bbv12I GWGCWC 1 cut(s) 861
BbvI GCAGC 2 cut(s) 662, 820
BccI CCATC 3 cut(s) 454, 673, 1073
BceAI ACGGC 1 cut(s) 692
BcgI CGANNNNNNTGC 2 cut(s) 139, 173
BciT130I CCWGG 1 cut(s) 111
BclI TGATCA 1 cut(s) 49
BcnI CCSGG 3 cut(s) 783, 784, 1207
BcoDI GTCTC 3 cut(s) 161, 254, 914
BcuI ACTAGT 1 cut(s) 1480
BfaI CTAG 5 cut(s) 395, 699, 950, 1340, 1481
BfmI CTRYAG 1 cut(s) 294
BfoI RGCGCY 1 cut(s) 708
BfuAI ACCTGC 1 cut(s) 584
BisI GCNGC 3 cut(s) 651, 834, 989
BlsI GCNGC 3 cut(s) 652, 835, 990
Bme1390I CCNGG 4 cut(s) 111, 783, 784, 1207
Bme18I GGWCC 1 cut(s) 1343
BmeT110I CYCGRG 2 cut(s) 782, 1110
BmgT120I GGNCC 1 cut(s) 1343
BmiI GGNNCC 4 cut(s) 278, 444, 996, 1421
BmrFI CCNGG 4 cut(s) 111, 783, 784, 1207
BmsI GCATC 4 cut(s) 289, 1252, 1300, 1531
BpmI CTGGAG 1 cut(s) 936
Bpu10I CCTNAGC 1 cut(s) 1278
BpuMI CCSGG 3 cut(s) 783, 784, 1207
BsaJI CCNNGG 2 cut(s) 782, 783
BsaWI WCCGGW 2 cut(s) 1403, 1454
BsaXI ACNNNNNCTCC 2 cut(s) 909, 939
Bsc4I CCNNNNNNNGG 5 cut(s) 382, 452, 1130, 1289, 1352
Bse118I RCCGGY 2 cut(s) 1403, 1454
Bse1I ACTGG 3 cut(s) 268, 546, 817
Bse21I CCTNAGG 1 cut(s) 1017
Bse3DI GCAATG 1 cut(s) 540
BseBI CCWGG 1 cut(s) 111
BseDI CCNNGG 2 cut(s) 782, 783
BseGI GGATG 2 cut(s) 684, 1315
BseLI CCNNNNNNNGG 5 cut(s) 382, 452, 1130, 1289, 1352
BseMI GCAATG 1 cut(s) 540
BseMII CTCAG 5 cut(s) 591, 828, 990, 1008, 1593
BseNI ACTGG 3 cut(s) 268, 546, 817
BseRI GAGGAG 1 cut(s) 1098
BseSI GKGCMC 2 cut(s) 445, 861
BseXI GCAGC 2 cut(s) 662, 820
BsgI GTGCAG 2 cut(s) 669, 1206
BshNI GGYRCC 2 cut(s) 442, 1419
BshTI ACCGGT 2 cut(s) 1403, 1454
BsiHKAI GWGCWC 1 cut(s) 861
BsiHKCI CYCGRG 2 cut(s) 782, 1110
BsiSI CCGG 5 cut(s) 783, 992, 1206, 1404, 1455
BslFI GGGAC 4 cut(s) 186, 513, 754, 1084
BslI CCNNNNNNNGG 5 cut(s) 382, 452, 1130, 1289, 1352
BsmAI GTCTC 3 cut(s) 161, 254, 914
BsmBI CGTCTC 1 cut(s) 161
BsmFI GGGAC 4 cut(s) 186, 513, 754, 1084
BsoBI CYCGRG 2 cut(s) 782, 1110
Bsp1286I GDGCHC 2 cut(s) 445, 861
Bsp1407I TGTACA 1 cut(s) 1084
Bsp143I GATC 6 cut(s) 49, 223, 629, 673, 994, 1114
BspACI CCGC 2 cut(s) 989, 1166
BspCNI CTCAG 5 cut(s) 592, 829, 991, 1009, 1592
BspLI GGNNCC 4 cut(s) 278, 444, 996, 1421
BspMI ACCTGC 1 cut(s) 584
BspPI GGATC 3 cut(s) 637, 989, 1002
BspT107I GGYRCC 2 cut(s) 442, 1419
BsrDI GCAATG 1 cut(s) 540
BsrFI RCCGGY 2 cut(s) 1403, 1454
BsrGI TGTACA 1 cut(s) 1084
BsrI ACTGG 3 cut(s) 268, 546, 817
BssAI RCCGGY 2 cut(s) 1403, 1454
BssECI CCNNGG 2 cut(s) 782, 783
BssMI GATC 6 cut(s) 49, 223, 629, 673, 994, 1114
Bst2UI CCWGG 1 cut(s) 111
Bst4CI ACNGT 4 cut(s) 295, 925, 956, 1391
Bst6I CTCTTC 1 cut(s) 381
BstAUI TGTACA 1 cut(s) 1084
BstDEI CTNAG 7 cut(s) 600, 654, 837, 999, 1017, 1278, 1579
BstEII GGTNACC 1 cut(s) 1316
BstENI CCTNNNNNAGG 1 cut(s) 1350
BstF5I GGATG 2 cut(s) 684, 1315
BstH2I RGCGCY 1 cut(s) 708
BstHHI GCGC 1 cut(s) 707
BstKTI GATC 6 cut(s) 52, 226, 632, 676, 997, 1117
BstMAI GTCTC 3 cut(s) 161, 254, 914
BstMBI GATC 6 cut(s) 49, 223, 629, 673, 994, 1114
BstMWI GCNNNNNNNGC 1 cut(s) 659
BstNI CCWGG 1 cut(s) 111
BstNSI RCATGY 5 cut(s) 528, 865, 1091, 1186, 1203
BstPI GGTNACC 1 cut(s) 1316
BstSCI CCNGG 4 cut(s) 109, 781, 782, 1205
BstSFI CTRYAG 1 cut(s) 294
BstSLI GKGCMC 2 cut(s) 445, 861
BstV1I GCAGC 2 cut(s) 662, 820
BstX2I RGATCY 1 cut(s) 994
BstXI CCANNNNNNTGG 1 cut(s) 914
BstYI RGATCY 1 cut(s) 994
Bsu36I CCTNAGG 1 cut(s) 1017
BtgZI GCGATG 1 cut(s) 525
BtsCI GGATG 2 cut(s) 684, 1315
BtsIMutI CAGTG 1 cut(s) 961
BveI ACCTGC 1 cut(s) 584
CaiI CAGNNNCTG 1 cut(s) 599
CfoI GCGC 1 cut(s) 707
Cfr10I RCCGGY 2 cut(s) 1403, 1454
Cfr13I GGNCC 1 cut(s) 1343
Cfr9I CCCGGG 1 cut(s) 782
Csp6I GTAC 6 cut(s) 114, 458, 597, 1085, 1387, 1420
CspAI ACCGGT 2 cut(s) 1403, 1454
CviAII CATG 9 cut(s) 434, 525, 862, 872, 1088, 1183, 1200, 1226, 1531
CviQI GTAC 6 cut(s) 114, 458, 597, 1085, 1387, 1420
DdeI CTNAG 7 cut(s) 600, 654, 837, 999, 1017, 1278, 1579
DpnI GATC 6 cut(s) 51, 225, 631, 675, 996, 1116
DpnII GATC 6 cut(s) 49, 223, 629, 673, 994, 1114
Eam1104I CTCTTC 1 cut(s) 381
EarI CTCTTC 1 cut(s) 381
Eco32I GATATC 1 cut(s) 1337
Eco47I GGWCC 1 cut(s) 1343
Eco57I CTGAAG 3 cut(s) 699, 774, 1289
Eco81I CCTNAGG 1 cut(s) 1017
Eco88I CYCGRG 2 cut(s) 782, 1110
Eco91I GGTNACC 1 cut(s) 1316
EcoNI CCTNNNNNAGG 1 cut(s) 1350
EcoO109I RGGNCCY 1 cut(s) 1343
EcoO65I GGTNACC 1 cut(s) 1316
EcoRII CCWGG 1 cut(s) 109
EcoRV GATATC 1 cut(s) 1337
Esp3I CGTCTC 1 cut(s) 161
FaeI CATG 9 cut(s) 437, 528, 865, 875, 1091, 1186, 1203, 1229, 1534
FaqI GGGAC 4 cut(s) 186, 513, 754, 1084
FatI CATG 9 cut(s) 433, 524, 861, 871, 1087, 1182, 1199, 1225, 1530
FauNDI CATATG 1 cut(s) 827
FbaI TGATCA 1 cut(s) 49
FblI GTMKAC 1 cut(s) 1566
Fnu4HI GCNGC 3 cut(s) 651, 834, 989
FokI GGATG 2 cut(s) 691, 1322
Fsp4HI GCNGC 3 cut(s) 651, 834, 989
FspBI CTAG 5 cut(s) 395, 699, 950, 1340, 1481
GlaI GCGC 1 cut(s) 706
GluI GCNGC 3 cut(s) 651, 834, 989
GsuI CTGGAG 1 cut(s) 936
HaeII RGCGCY 1 cut(s) 708
HapII CCGG 5 cut(s) 783, 992, 1206, 1404, 1455
HhaI GCGC 1 cut(s) 707
Hin1II CATG 9 cut(s) 437, 528, 865, 875, 1091, 1186, 1203, 1229, 1534
Hin6I GCGC 1 cut(s) 705
HinP1I GCGC 1 cut(s) 705
HincII GTYRAC 2 cut(s) 484, 1567
HindII GTYRAC 2 cut(s) 484, 1567
HindIII AAGCTT 1 cut(s) 1550
HinfI GANTC 4 cut(s) 686, 903, 1150, 1559
HpaI GTTAAC 1 cut(s) 484
HpaII CCGG 5 cut(s) 783, 992, 1206, 1404, 1455
HphI GGTGA 2 cut(s) 110, 1406
Hpy166II GTNNAC 6 cut(s) 458, 484, 859, 1085, 1397, 1567
Hpy188I TCNGA 3 cut(s) 678, 1269, 1582
Hpy188III TCNNGA 8 cut(s) 332, 341, 633, 915, 998, 1016, 1029, 1112
Hpy8I GTNNAC 6 cut(s) 458, 484, 859, 1085, 1397, 1567
Hpy99I CGWCG 1 cut(s) 1571
HpyAV CCTTC 4 cut(s) 250, 1128, 1208, 1324
HpyCH4III ACNGT 4 cut(s) 295, 925, 956, 1391
HpyCH4IV ACGT 1 cut(s) 910
HpyF10VI GCNNNNNNNGC 1 cut(s) 659
HpyF3I CTNAG 7 cut(s) 600, 654, 837, 999, 1017, 1278, 1579
HpySE526I ACGT 1 cut(s) 910
Hsp92II CATG 9 cut(s) 437, 528, 865, 875, 1091, 1186, 1203, 1229, 1534
HspAI GCGC 1 cut(s) 705
KpnI GGTACC 1 cut(s) 1423
Ksp22I TGATCA 1 cut(s) 49
KspAI GTTAAC 1 cut(s) 484
Kzo9I GATC 6 cut(s) 49, 223, 629, 673, 994, 1114
LmnI GCTCC 1 cut(s) 702
Lsp1109I GCAGC 2 cut(s) 662, 820
LweI GCATC 4 cut(s) 289, 1252, 1300, 1531
MaeI CTAG 5 cut(s) 395, 699, 950, 1340, 1481
MaeII ACGT 1 cut(s) 910
MaeIII GTNAC 5 cut(s) 71, 415, 709, 1316, 1574
MalI GATC 6 cut(s) 51, 225, 631, 675, 996, 1116
MboI GATC 6 cut(s) 49, 223, 629, 673, 994, 1114
MboII GAAGA 4 cut(s) 398, 441, 1364, 1547
MflI RGATCY 1 cut(s) 994
MhlI GDGCHC 2 cut(s) 445, 861
MlyI GAGTC 1 cut(s) 1144
MmeI TCCRAC 3 cut(s) 433, 931, 1469
MroXI GAANNNNTTC 1 cut(s) 690
MseI TTAA 6 cut(s) 153, 218, 372, 483, 588, 1056
MslI CAYNNNNRTG 2 cut(s) 1092, 1437
MspI CCGG 5 cut(s) 783, 992, 1206, 1404, 1455
MspR9I CCNGG 4 cut(s) 111, 783, 784, 1207
MvaI CCWGG 1 cut(s) 111
MwoI GCNNNNNNNGC 1 cut(s) 659
NciI CCSGG 3 cut(s) 783, 784, 1207
NdeI CATATG 1 cut(s) 827
NdeII GATC 6 cut(s) 49, 223, 629, 673, 994, 1114
NlaIII CATG 9 cut(s) 437, 528, 865, 875, 1091, 1186, 1203, 1229, 1534
NlaIV GGNNCC 4 cut(s) 278, 444, 996, 1421
NmuCI GTSAC 2 cut(s) 71, 709
NspI RCATGY 5 cut(s) 528, 865, 1091, 1186, 1203
PaeR7I CTCGAG 1 cut(s) 1110
PciI ACATGT 2 cut(s) 861, 1087
PcsI WCGNNNNNNNCGW 1 cut(s) 907
PdmI GAANNNNTTC 1 cut(s) 690
PfeI GAWTC 3 cut(s) 686, 903, 1559
PflMI CCANNNNNTGG 2 cut(s) 452, 1130
PinAI ACCGGT 2 cut(s) 1403, 1454
PkrI GCNGC 3 cut(s) 652, 835, 990
PleI GAGTC 1 cut(s) 1144
PpsI GAGTC 1 cut(s) 1144
PpuMI RGGWCCY 1 cut(s) 1343
PscI ACATGT 2 cut(s) 861, 1087
PsiI TTATAA 1 cut(s) 983
Psp1406I AACGTT 1 cut(s) 910
Psp5II RGGWCCY 1 cut(s) 1343
Psp6I CCWGG 1 cut(s) 109
PspEI GGTNACC 1 cut(s) 1316
PspGI CCWGG 1 cut(s) 109
PspN4I GGNNCC 4 cut(s) 278, 444, 996, 1421
PspPI GGNCC 1 cut(s) 1343
PspPPI RGGWCCY 1 cut(s) 1343
PstNI CAGNNNCTG 1 cut(s) 599
PsuI RGATCY 1 cut(s) 994
RsaI GTAC 6 cut(s) 115, 459, 598, 1086, 1388, 1421
RsaNI GTAC 6 cut(s) 114, 458, 597, 1085, 1387, 1420
RseI CAYNNNNRTG 2 cut(s) 1092, 1437
SalI GTCGAC 1 cut(s) 1565
SaqAI TTAA 6 cut(s) 153, 218, 372, 483, 588, 1056
SatI GCNGC 3 cut(s) 651, 834, 989
Sau3AI GATC 6 cut(s) 49, 223, 629, 673, 994, 1114
Sau96I GGNCC 1 cut(s) 1343
SchI GAGTC 1 cut(s) 1144
ScrFI CCNGG 4 cut(s) 111, 783, 784, 1207
SduI GDGCHC 2 cut(s) 445, 861
SfaNI GCATC 4 cut(s) 289, 1252, 1300, 1531
SfcI CTRYAG 1 cut(s) 294
Sfr274I CTCGAG 1 cut(s) 1110
SinI GGWCC 1 cut(s) 1343
SlaI CTCGAG 1 cut(s) 1110
SmaI CCCGGG 1 cut(s) 784
SmiMI CAYNNNNRTG 2 cut(s) 1092, 1437
SmlI CTYRAG 1 cut(s) 1110
SmoI CTYRAG 1 cut(s) 1110
SpeI ACTAGT 1 cut(s) 1480
SsiI CCGC 2 cut(s) 989, 1166
SspI AATATT 1 cut(s) 1298
SspMI CTAG 5 cut(s) 395, 699, 950, 1340, 1481
StyD4I CCNGG 4 cut(s) 109, 781, 782, 1205
TaaI ACNGT 4 cut(s) 295, 925, 956, 1391
TaiI ACGT 1 cut(s) 913
TaqI TCGA 3 cut(s) 964, 1111, 1566
TatI WGTACW 2 cut(s) 457, 1084
TauI GCSGC 1 cut(s) 991
TfiI GAWTC 3 cut(s) 686, 903, 1559
Tru1I TTAA 6 cut(s) 153, 218, 372, 483, 588, 1056
Tru9I TTAA 6 cut(s) 153, 218, 372, 483, 588, 1056
TscAI CASTG 1 cut(s) 961
TseFI GTSAC 2 cut(s) 71, 709
TseI GCWGC 2 cut(s) 650, 833
Tsp45I GTSAC 2 cut(s) 71, 709
TspDTI ATGAA 8 cut(s) 153, 324, 422, 737, 762, 776, 1023, 1343
TspGWI ACGGA 1 cut(s) 1584
TspMI CCCGGG 1 cut(s) 782
TspRI CASTG 1 cut(s) 961
Van91I CCANNNNNTGG 2 cut(s) 452, 1130
VneI GTGCAC 1 cut(s) 857
VpaK11BI GGWCC 1 cut(s) 1343
XagI CCTNNNNNAGG 1 cut(s) 1350
XapI RAATTY 3 cut(s) 142, 327, 1011
XceI RCATGY 5 cut(s) 528, 865, 1091, 1186, 1203
XhoI CTCGAG 1 cut(s) 1110
XmaI CCCGGG 1 cut(s) 782
XmiI GTMKAC 1 cut(s) 1566
XmnI GAANNNNTTC 1 cut(s) 690
XspI CTAG 5 cut(s) 395, 699, 950, 1340, 1481
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.