Rorug06G0244800
MYB Family

Myb SANT-like DNA-binding domain protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000240
Physical Location & Seq
Reverse (-)
39128840 .. 39132293
3454 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0244800.1

Sequence Viewer

Length: 1110 bp
ATGGCCCGTCGAGCCCTCCCCATCCTCAAGCAGCTCTCTCACCGCCCCACACTCGGATCCTTCCTCCCCAAACCCGACCCGAACACCCGATCGGTCACTTACATGCCCCGACCCGGCGACGGAACCCCGCGCTGCGTCACTCTCATCCCCGGCGACGGGATCGGGCCGCTCGTCACCAACGCCGTGGAGCAAGTCATGGAGGCGATGCACGCGCCGGTGTTCTTCGAGCGCTACGACGTCCACGGCGACATGAGCCGCGTCCCGCCGGAGGTGATGGACTCGATCCGGAGGAACAAGGTCTGCATAAAGGGCGGGCTTAAGACGCCGGTCGGCGGCGGCGTGAGCTCCCTCAATATGCAGCTGAGGAAGGAGCTTGATTTGTACGCGTCGCTGGTCAATTGCTTCAACCTTCCTGGACTCCCCACGCGCCACGAGAACGTGGACATTGTGGTGATCAGAGAGAACACCGAGGGTGAGTACGCCGGCCTCGAGCACGAAGTCGTTCCCGGAGTCGTGGAGAGCCTCAAGTTCTGCTCAGAACGTATAGCGAAGTATGCGTTTGAGTATGCATACTTGAATAACAGAAAGAAAGTCACTGCCGTGCACAAAGCCAACATCATGAAGCTTGCGGATGGTTTGTTCTTGGAGTCTTGCCGGGAGGTTGCGACAAAGTATCCCAGTATCAAGTATAGTGAGATTATCGTGGACAACTGCTGTATGCAACTTGTTTCAAAGCCTGAGCAGTTTGACGTGATGGTCACTCCTAATCTTTATGGAAATCTAGTAGCAAATACAGCAGCTGGTATTGCTGGAGGCACTGGTGTCATGCCAGGAGGAAATGTGGGTGCTGATCATGCTGTTTTTGAGCAAGGTGCTTCAGCAGGAAATGTAGGGAATGAAAAGCTATGGGAGCAAAAGACTGCCAATCCAGTTGCATTGCTCCTGTCATCAGCCATGATGTTGAGGCATCTCCAGTTTCCCTCATTTGCTGATCGACTTGAAACAGCCGTGAAACGTGTAATTTCAGAAGGCAAGTACCGTACCAAAGATCTTGGTGGAGTGAGCACTACTCAAGAGGTTGTTGACGCCGTTATTTCTAATCTGGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-bind_3

Protein Analysis

369

Amino Acids

40.24

Weight (kDa)

7.08

Isoelectric Point (pI)

39.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Iso_dh PF00180 46 - 364 1.4e-75 Isocitrate/isopropylmalate dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000240)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G11300
fragaria_vesca FvH4_1g19130 FvH4_1g28413 FvH4_2g11122 FvH4_3g19652 FvH4_3g29921 FvH4_4g07761 FvH4_4g20923 FvH4_5g23913 FvH4_5g23913 FvH4_6g38850 FvH4_6g39920 FvH4_6g53022 FvH4_7g00070 FvH4_7g08972 FvH4_7g12221
malus_domestica MD06G1090800.v1.1 MD15G1314200.v1.1 MD16G1231800.v1.1
prunus_persica Prupe.1G173000_v2.0.a1 Prupe.4G113600_v2.0.a1 Prupe.5G020800_v2.0.a1 Prupe.5G020800_v2.0.a1 Prupe.5G020800_v2.0.a1 Prupe.5G207000_v2.0.a1 Prupe.6G155900_v2.0.a1 Prupe.8G016500_v2.0.a1
pyrus_communis pycom03g16230 pycom04g16130 pycom05g03970 pycom05g10500 pycom08g06480 pycom08g11770 pycom12g11350 pycom12g18510 pycom13g02550 pycom13g13780 pycom13g27450 pycom13g27460 pycom15g26130 pycom15g27470
rosa_chinensis RchiOBHm_Chr2g0103961 RchiOBHm_Chr2g0128681 RchiOBHm_Chr2g0153151 RchiOBHm_Chr3g0459461 RchiOBHm_Chr4g0406011 RchiOBHm_Chr4g0428601 RchiOBHm_Chr5g0029731 RchiOBHm_Chr5g0069971 RchiOBHm_Chr6g0253171 RchiOBHm_Chr6g0254701 RchiOBHm_Chr7g0199281
rosa_laevigata RLG00000002281 RLG00000007586 RLG00000008509 RLG00000008888 RLG00000009501 RLG00000012763
rosa_multiflora Rmu_sc0000008.1_g000009 Rmu_sc0000079.1_g000058 Rmu_sc0000117.1_g000008 Rmu_sc0000151.1_g000009 Rmu_sc0000166.1_g000053 Rmu_sc0000240.1_g000064 Rmu_sc0000435.1_g000013 Rmu_sc0000552.1_g000019 Rmu_sc0000776.1_g000078 Rmu_sc0001597.1_g000012 Rmu_sc0001759.1_g000017 Rmu_sc0002137.1_g000011 Rmu_sc0002933.1_g000006 Rmu_sc0002938.1_g000049 Rmu_sc0003257.1_g000014 Rmu_sc0003465.1_g000054 Rmu_sc0003505.1_g000025 Rmu_sc0003526.1_g000016 Rmu_sc0003829.1_g000021 Rmu_sc0003855.1_g000002 Rmu_sc0005514.1_g000003 Rmu_sc0005514.1_g000004 Rmu_sc0007820.1_g000001 Rmu_sc0008322.1_g000016 Rmu_sc0008636.1_g000003 Rmu_sc0008812.1_g000009 Rmu_sc0010960.1_g000003 Rmu_sc0011753.1_g000001 Rmu_sc0013017.1_g000001 Rmu_sc0013176.1_g000005 Rmu_sc0015928.1_g000001 Rmu_sc0020751.1_g000003 Rmu_sc0038865.1_g000001 Rmu_ssc0000089.1_g000008 Rmu_ssc0000164.1_g000007 Rmu_ssc0000388.1_g000013 Rmu_ssc0000400.1_g000076 Rmu_ssc0000486.1_g000012
rosa_roxburghii Rroxscaffold_1G00005880 Rroxscaffold_1G00051030 Rroxscaffold_2G00107440 Rroxscaffold_2G00115370 Rroxscaffold_2G00115870 Rroxscaffold_2G00146360 Rroxscaffold_3G00228870 Rroxscaffold_3G00230350 Rroxscaffold_3G00246190 Rroxscaffold_6G00423350 Rroxscaffold_7G00157820 Rroxscaffold_7G00184840 Rroxscaffold_7G00186490
rosa_rugosa Rorug02G0248700 Rorug02G0279900 Rorug02G0285600 Rorug02G0285700 Rorug03G0068700 Rorug03G0077100 Rorug03G0247700 Rorug03G0304800 Rorug04G0059600 Rorug05G0104000 Rorug05G0104000 Rorug05G0192000 Rorug05G0247800 Rorug05G0248000 Rorug06G0064100 Rorug06G0244800
rosa_samantha Rh4BG200400 Rh4CG094600 Rh4CG114400 Rh5BG465300 Rh6AG057500
rosa_wichuraiana Rw1G014470 Rw2G026930 Rw5G042730 Rw6G021090 Rw6G022960 Rw6G025470 Rw6G034450 Rw7G034300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 755
AatII GACGTC 1 cut(s) 240
AccBSI CCGCTC 1 cut(s) 169
AccII CGCG 5 cut(s) 130, 212, 258, 386, 427
AccIII TCCGGA 1 cut(s) 285
AciI CCGC 9 cut(s) 43, 128, 167, 256, 263, 312, 333, 336, 629
AclWI GGATC 4 cut(s) 51, 64, 167, 277
AcuI CTGAAG 1 cut(s) 861
AcyI GRCGYC 3 cut(s) 237, 323, 1086
AfaI GTAC 4 cut(s) 383, 479, 1037, 1042
AfeI AGCGCT 1 cut(s) 230
AfiI CCNNNNNNNGG 7 cut(s) 53, 113, 119, 155, 156, 268, 332
AflII CTTAAG 1 cut(s) 317
AflIII ACRYGT 2 cut(s) 384, 1015
AgsI TTSAA 4 cut(s) 406, 577, 732, 1001
AjiI CACGTC 1 cut(s) 751
AjnI CCWGG 2 cut(s) 412, 829
AleI CACNNNNGTG 1 cut(s) 599
AloI GAACNNNNNNTCC 2 cut(s) 623, 655
AluBI AGCT 7 cut(s) 34, 345, 361, 373, 625, 800, 904
AluI AGCT 7 cut(s) 34, 345, 361, 373, 625, 800, 904
Alw21I GWGCWC 4 cut(s) 347, 495, 606, 1067
Alw44I GTGCAC 1 cut(s) 602
AlwI GGATC 4 cut(s) 51, 64, 167, 277
AlwNI CAGNNNCTG 1 cut(s) 800
Ama87I CYCGRG 1 cut(s) 488
Aor13HI TCCGGA 1 cut(s) 285
Aor51HI AGCGCT 1 cut(s) 230
AoxI GGCC 3 cut(s) 3, 164, 484
ApaLI GTGCAC 1 cut(s) 602
ApeKI GCWGC 4 cut(s) 31, 132, 358, 797
Asp700I GAANNNNTTC 1 cut(s) 501
AspLEI GCGC 4 cut(s) 132, 214, 231, 429
AspS9I GGNCC 2 cut(s) 4, 164
AsuC2I CCSGG 4 cut(s) 114, 150, 507, 656
AsuHPI GGTGA 5 cut(s) 32, 166, 283, 463, 485
AvaI CYCGRG 1 cut(s) 488
BaeGI GKGCMC 1 cut(s) 606
BamHI GGATCC 1 cut(s) 56
BanII GRGCYC 2 cut(s) 16, 347
BauI CACGAG 1 cut(s) 431
Bbv12I GWGCWC 4 cut(s) 347, 495, 606, 1067
BbvCI CCTCAGC 1 cut(s) 362
BbvI GCAGC 4 cut(s) 43, 119, 370, 809
BccI CCATC 4 cut(s) 29, 268, 626, 748
BceAI ACGGC 5 cut(s) 167, 259, 584, 992, 1073
BciT130I CCWGG 2 cut(s) 414, 831
BciVI GTATCC 1 cut(s) 684
BclI TGATCA 2 cut(s) 453, 850
BcnI CCSGG 4 cut(s) 114, 150, 507, 656
BfaI CTAG 1 cut(s) 782
BfoI RGCGCY 1 cut(s) 232
BfrI CTTAAG 1 cut(s) 317
BfuI GTATCC 1 cut(s) 684
BglII AGATCT 1 cut(s) 1048
BisI GCNGC 8 cut(s) 32, 133, 167, 256, 334, 337, 359, 798
BlsI GCNGC 8 cut(s) 33, 134, 168, 257, 335, 338, 360, 799
Bme1390I CCNGG 6 cut(s) 114, 150, 414, 507, 656, 831
BmeT110I CYCGRG 1 cut(s) 488
BmgBI CACGTC 1 cut(s) 751
BmgT120I GGNCC 2 cut(s) 4, 164
BmiI GGNNCC 2 cut(s) 58, 124
BmrFI CCNGG 6 cut(s) 114, 150, 414, 507, 656, 831
BmrI ACTGGG 1 cut(s) 672
BmsI GCATC 2 cut(s) 195, 976
BmuI ACTGGG 1 cut(s) 672
BoxI GACNNNNGTC 1 cut(s) 326
BplI GAGNNNNNCTC 2 cut(s) 1054, 1086
BpmI CTGGAG 2 cut(s) 831, 956
Bpu10I CCTNAGC 2 cut(s) 362, 738
BpuEI CTTGAG 3 cut(s) 11, 509, 1056
BpuMI CCSGG 4 cut(s) 114, 150, 507, 656
BsaHI GRCGYC 3 cut(s) 237, 323, 1086
BsaJI CCNNGG 4 cut(s) 148, 183, 241, 468
BsaWI WCCGGW 1 cut(s) 285
BsaXI ACNNNNNCTCC 2 cut(s) 825, 855
Bsc4I CCNNNNNNNGG 7 cut(s) 53, 113, 119, 155, 156, 268, 332
Bse118I RCCGGY 3 cut(s) 214, 325, 482
Bse1I ACTGG 4 cut(s) 678, 823, 929, 973
Bse3DI GCAATG 1 cut(s) 935
BseAI TCCGGA 1 cut(s) 285
BseBI CCWGG 2 cut(s) 414, 831
BseDI CCNNGG 4 cut(s) 148, 183, 241, 468
BseGI GGATG 3 cut(s) 21, 144, 637
BseLI CCNNNNNNNGG 7 cut(s) 53, 113, 119, 155, 156, 268, 332
BseMI GCAATG 1 cut(s) 935
BseMII CTCAG 3 cut(s) 353, 549, 729
BseNI ACTGG 4 cut(s) 678, 823, 929, 973
BseSI GKGCMC 1 cut(s) 606
BseXI GCAGC 4 cut(s) 43, 119, 370, 809
Bsh1236I CGCG 5 cut(s) 130, 212, 258, 386, 427
Bsh1285I CGRYCG 2 cut(s) 92, 330
BshFI GGCC 3 cut(s) 5, 166, 486
BsiEI CGRYCG 2 cut(s) 92, 330
BsiHKAI GWGCWC 4 cut(s) 347, 495, 606, 1067
BsiHKCI CYCGRG 1 cut(s) 488
BsiSI CCGG 9 cut(s) 114, 150, 215, 266, 286, 326, 483, 507, 655
BslFI GGGAC 1 cut(s) 245
BslI CCNNNNNNNGG 7 cut(s) 53, 113, 119, 155, 156, 268, 332
BsmFI GGGAC 1 cut(s) 245
BsnI GGCC 3 cut(s) 5, 166, 486
BsoBI CYCGRG 1 cut(s) 488
Bsp1286I GDGCHC 5 cut(s) 16, 347, 495, 606, 1067
Bsp13I TCCGGA 1 cut(s) 285
Bsp143I GATC 8 cut(s) 56, 89, 159, 282, 453, 850, 991, 1048
BspACI CCGC 9 cut(s) 43, 128, 167, 256, 263, 312, 333, 336, 629
BspANI GGCC 3 cut(s) 5, 166, 486
BspCNI CTCAG 3 cut(s) 354, 548, 730
BspEI TCCGGA 1 cut(s) 285
BspFNI CGCG 5 cut(s) 130, 212, 258, 386, 427
BspHI TCATGA 1 cut(s) 618
BspLI GGNNCC 2 cut(s) 58, 124
BspPI GGATC 4 cut(s) 51, 64, 167, 277
BspTI CTTAAG 1 cut(s) 317
BsrBI CCGCTC 1 cut(s) 169
BsrDI GCAATG 1 cut(s) 935
BsrFI RCCGGY 3 cut(s) 214, 325, 482
BsrI ACTGG 4 cut(s) 678, 823, 929, 973
BssAI RCCGGY 3 cut(s) 214, 325, 482
BssECI CCNNGG 4 cut(s) 148, 183, 241, 468
BssMI GATC 8 cut(s) 56, 89, 159, 282, 453, 850, 991, 1048
BssNI GRCGYC 3 cut(s) 237, 323, 1086
BssSI CACGAG 1 cut(s) 431
Bst2BI CACGAG 1 cut(s) 431
Bst2UI CCWGG 2 cut(s) 414, 831
Bst4CI ACNGT 1 cut(s) 1040
BstACI GRCGYC 3 cut(s) 237, 323, 1086
BstAFI CTTAAG 1 cut(s) 317
BstC8I GCNNGC 4 cut(s) 210, 314, 484, 627
BstDEI CTNAG 3 cut(s) 362, 535, 738
BstDSI CCRYGG 2 cut(s) 183, 241
BstF5I GGATG 3 cut(s) 21, 144, 637
BstFNI CGCG 5 cut(s) 130, 212, 258, 386, 427
BstH2I RGCGCY 1 cut(s) 232
BstHHI GCGC 4 cut(s) 132, 214, 231, 429
BstKTI GATC 8 cut(s) 59, 92, 162, 285, 456, 853, 994, 1051
BstMBI GATC 8 cut(s) 56, 89, 159, 282, 453, 850, 991, 1048
BstMCI CGRYCG 2 cut(s) 92, 330
BstNI CCWGG 2 cut(s) 414, 831
BstNSI RCATGY 1 cut(s) 106
BstPAI GACNNNNGTC 1 cut(s) 326
BstSCI CCNGG 6 cut(s) 112, 148, 412, 505, 654, 829
BstSLI GKGCMC 1 cut(s) 606
BstUI CGCG 5 cut(s) 130, 212, 258, 386, 427
BstV1I GCAGC 4 cut(s) 43, 119, 370, 809
BstX2I RGATCY 2 cut(s) 56, 1048
BstXI CCANNNNNNTGG 1 cut(s) 184
BstYI RGATCY 2 cut(s) 56, 1048
BsuI GTATCC 1 cut(s) 684
BsuRI GGCC 3 cut(s) 5, 166, 486
BtgI CCRYGG 2 cut(s) 183, 241
BtgZI GCGATG 1 cut(s) 218
BtrI CACGTC 1 cut(s) 751
BtsCI GGATG 3 cut(s) 21, 144, 637
BtsI GCAGTG 1 cut(s) 594
BtsIMutI CAGTG 2 cut(s) 594, 816
Cac8I GCNNGC 4 cut(s) 210, 314, 484, 627
CaiI CAGNNNCTG 1 cut(s) 800
CciI TCATGA 1 cut(s) 618
CfoI GCGC 4 cut(s) 132, 214, 231, 429
Cfr10I RCCGGY 3 cut(s) 214, 325, 482
Cfr13I GGNCC 2 cut(s) 4, 164
CseI GACGC 5 cut(s) 124, 247, 331, 375, 1094
Csp6I GTAC 4 cut(s) 382, 478, 1036, 1041
CviAII CATG 7 cut(s) 103, 196, 250, 619, 826, 854, 955
CviQI GTAC 4 cut(s) 382, 478, 1036, 1041
DdeI CTNAG 3 cut(s) 362, 535, 738
DpnI GATC 8 cut(s) 58, 91, 161, 284, 455, 852, 993, 1050
DpnII GATC 8 cut(s) 56, 89, 159, 282, 453, 850, 991, 1048
DrdI GACNNNNNNGTC 1 cut(s) 755
DseDI GACNNNNNNGTC 1 cut(s) 755
Ecl136II GAGCTC 1 cut(s) 345
Eco24I GRGCYC 2 cut(s) 16, 347
Eco47III AGCGCT 1 cut(s) 230
Eco53kI GAGCTC 1 cut(s) 345
Eco57I CTGAAG 1 cut(s) 861
Eco88I CYCGRG 1 cut(s) 488
EcoICRI GAGCTC 1 cut(s) 345
EcoRII CCWGG 2 cut(s) 412, 829
EcoT22I ATGCAT 1 cut(s) 571
EcoT38I GRGCYC 2 cut(s) 16, 347
FaeI CATG 7 cut(s) 106, 199, 253, 622, 829, 857, 958
FaqI GGGAC 1 cut(s) 245
FatI CATG 7 cut(s) 102, 195, 249, 618, 825, 853, 954
FauI CCCGC 3 cut(s) 135, 270, 305
FbaI TGATCA 2 cut(s) 453, 850
Fnu4HI GCNGC 8 cut(s) 32, 133, 167, 256, 334, 337, 359, 798
FokI GGATG 3 cut(s) 8, 131, 644
FriOI GRGCYC 2 cut(s) 16, 347
Fsp4HI GCNGC 8 cut(s) 32, 133, 167, 256, 334, 337, 359, 798
FspBI CTAG 1 cut(s) 782
GlaI GCGC 4 cut(s) 131, 213, 230, 428
GluI GCNGC 8 cut(s) 32, 133, 167, 256, 334, 337, 359, 798
GsuI CTGGAG 2 cut(s) 831, 956
HaeII RGCGCY 1 cut(s) 232
HaeIII GGCC 3 cut(s) 5, 166, 486
HapII CCGG 9 cut(s) 114, 150, 215, 266, 286, 326, 483, 507, 655
HgaI GACGC 5 cut(s) 124, 247, 331, 375, 1094
HhaI GCGC 4 cut(s) 132, 214, 231, 429
Hin1I GRCGYC 3 cut(s) 237, 323, 1086
Hin1II CATG 7 cut(s) 106, 199, 253, 622, 829, 857, 958
Hin6I GCGC 4 cut(s) 130, 212, 229, 427
HinP1I GCGC 4 cut(s) 130, 212, 229, 427
HincII GTYRAC 1 cut(s) 1084
HindII GTYRAC 1 cut(s) 1084
HindIII AAGCTT 1 cut(s) 623
HinfI GANTC 4 cut(s) 278, 417, 510, 647
HpaII CCGG 9 cut(s) 114, 150, 215, 266, 286, 326, 483, 507, 655
HphI GGTGA 5 cut(s) 32, 166, 283, 463, 485
Hpy166II GTNNAC 5 cut(s) 241, 442, 604, 706, 1084
Hpy188I TCNGA 4 cut(s) 56, 458, 538, 1027
Hpy188III TCNNGA 4 cut(s) 286, 619, 1073, 1103
Hpy8I GTNNAC 5 cut(s) 241, 442, 604, 706, 1084
Hpy99I CGWCG 5 cut(s) 12, 122, 158, 239, 391
HpyAV CCTTC 4 cut(s) 70, 361, 419, 1022
HpyCH4III ACNGT 1 cut(s) 1040
HpyCH4IV ACGT 5 cut(s) 237, 438, 541, 750, 1015
HpyCH4V TGCA 7 cut(s) 208, 303, 358, 569, 604, 721, 935
HpyF3I CTNAG 3 cut(s) 362, 535, 738
HpySE526I ACGT 5 cut(s) 237, 438, 541, 750, 1015
Hsp92I GRCGYC 3 cut(s) 237, 323, 1086
Hsp92II CATG 7 cut(s) 106, 199, 253, 622, 829, 857, 958
HspAI GCGC 4 cut(s) 130, 212, 229, 427
Kpn2I TCCGGA 1 cut(s) 285
KroI GCCGGC 1 cut(s) 482
KroNI GCCGGC 1 cut(s) 484
Ksp22I TGATCA 2 cut(s) 453, 850
Kzo9I GATC 8 cut(s) 56, 89, 159, 282, 453, 850, 991, 1048
LmnI GCTCC 5 cut(s) 187, 350, 370, 910, 945
Lsp1109I GCAGC 4 cut(s) 43, 119, 370, 809
LweI GCATC 2 cut(s) 195, 976
MaeI CTAG 1 cut(s) 782
MaeII ACGT 5 cut(s) 237, 438, 541, 750, 1015
MaeIII GTNAC 5 cut(s) 94, 136, 172, 592, 757
MalI GATC 8 cut(s) 58, 91, 161, 284, 455, 852, 993, 1050
MbiI CCGCTC 1 cut(s) 169
MboI GATC 8 cut(s) 56, 89, 159, 282, 453, 850, 991, 1048
MboII GAAGA 1 cut(s) 214
MfeI CAATTG 1 cut(s) 397
MflI RGATCY 2 cut(s) 56, 1048
MhlI GDGCHC 5 cut(s) 16, 347, 495, 606, 1067
MluCI AATT 2 cut(s) 397, 1020
MluI ACGCGT 1 cut(s) 384
MlyI GAGTC 4 cut(s) 272, 411, 519, 656
Mph1103I ATGCAT 1 cut(s) 571
MroI TCCGGA 1 cut(s) 285
MroNI GCCGGC 1 cut(s) 482
MroXI GAANNNNTTC 1 cut(s) 501
MseI TTAA 1 cut(s) 318
MslI CAYNNNNRTG 3 cut(s) 101, 449, 599
MspA1I CMGCKG 2 cut(s) 361, 800
MspCI CTTAAG 1 cut(s) 317
MspI CCGG 9 cut(s) 114, 150, 215, 266, 286, 326, 483, 507, 655
MspR9I CCNGG 6 cut(s) 114, 150, 414, 507, 656, 831
MunI CAATTG 1 cut(s) 397
MvaI CCWGG 2 cut(s) 414, 831
MvnI CGCG 5 cut(s) 130, 212, 258, 386, 427
NaeI GCCGGC 1 cut(s) 484
NciI CCSGG 4 cut(s) 114, 150, 507, 656
NdeII GATC 8 cut(s) 56, 89, 159, 282, 453, 850, 991, 1048
NgoMIV GCCGGC 1 cut(s) 482
NlaIII CATG 7 cut(s) 106, 199, 253, 622, 829, 857, 958
NlaIV GGNNCC 2 cut(s) 58, 124
NmuCI GTSAC 5 cut(s) 94, 136, 172, 592, 757
NsiI ATGCAT 1 cut(s) 571
NspI RCATGY 1 cut(s) 106
OliI CACNNNNGTG 1 cut(s) 599
PaeR7I CTCGAG 1 cut(s) 488
PagI TCATGA 1 cut(s) 618
PcsI WCGNNNNNNNCGW 5 cut(s) 168, 231, 243, 336, 486
PdiI GCCGGC 1 cut(s) 484
PdmI GAANNNNTTC 1 cut(s) 501
PfoI TCCNGGA 2 cut(s) 412, 505
PkrI GCNGC 8 cut(s) 33, 134, 168, 257, 335, 338, 360, 799
Ple19I CGATCG 1 cut(s) 92
PleI GAGTC 4 cut(s) 272, 411, 518, 655
PpsI GAGTC 4 cut(s) 272, 411, 518, 655
PshAI GACNNNNGTC 1 cut(s) 326
Psp124BI GAGCTC 1 cut(s) 347
Psp6I CCWGG 2 cut(s) 412, 829
PspGI CCWGG 2 cut(s) 412, 829
PspN4I GGNNCC 2 cut(s) 58, 124
PspPI GGNCC 2 cut(s) 4, 164
PspXI VCTCGAGB 1 cut(s) 488
PstNI CAGNNNCTG 1 cut(s) 800
PsuI RGATCY 2 cut(s) 56, 1048
PvuI CGATCG 1 cut(s) 92
PvuII CAGCTG 2 cut(s) 361, 800
RsaI GTAC 4 cut(s) 383, 479, 1037, 1042
RsaNI GTAC 4 cut(s) 382, 478, 1036, 1041
RseI CAYNNNNRTG 3 cut(s) 101, 449, 599
SacI GAGCTC 1 cut(s) 347
SaqAI TTAA 1 cut(s) 318
SatI GCNGC 8 cut(s) 32, 133, 167, 256, 334, 337, 359, 798
Sau3AI GATC 8 cut(s) 56, 89, 159, 282, 453, 850, 991, 1048
Sau96I GGNCC 2 cut(s) 4, 164
SchI GAGTC 4 cut(s) 272, 411, 519, 656
ScrFI CCNGG 6 cut(s) 114, 150, 414, 507, 656, 831
SduI GDGCHC 5 cut(s) 16, 347, 495, 606, 1067
SfaNI GCATC 2 cut(s) 195, 976
Sfr274I CTCGAG 1 cut(s) 488
SgrAI CRCCGGYG 1 cut(s) 214
SlaI CTCGAG 1 cut(s) 488
SmiMI CAYNNNNRTG 3 cut(s) 101, 449, 599
SmlI CTYRAG 5 cut(s) 26, 317, 488, 524, 1071
SmoI CTYRAG 5 cut(s) 26, 317, 488, 524, 1071
Sse9I AATT 2 cut(s) 397, 1020
SsiI CCGC 9 cut(s) 43, 128, 167, 256, 263, 312, 333, 336, 629
SspMI CTAG 1 cut(s) 782
SstI GAGCTC 1 cut(s) 347
StyD4I CCNGG 6 cut(s) 112, 148, 412, 505, 654, 829
TaaI ACNGT 1 cut(s) 1040
TaiI ACGT 5 cut(s) 240, 441, 544, 753, 1018
TaqI TCGA 5 cut(s) 10, 225, 281, 489, 994
TaqII GACCGA 1 cut(s) 82
TasI AATT 2 cut(s) 397, 1020
TauI GCSGC 4 cut(s) 169, 258, 336, 339
Tru1I TTAA 1 cut(s) 318
Tru9I TTAA 1 cut(s) 318
TscAI CASTG 2 cut(s) 601, 823
TseFI GTSAC 5 cut(s) 94, 136, 172, 592, 757
TseI GCWGC 4 cut(s) 31, 132, 358, 797
Tsp45I GTSAC 5 cut(s) 94, 136, 172, 592, 757
TspDTI ATGAA 2 cut(s) 635, 912
TspGWI ACGGA 1 cut(s) 135
TspRI CASTG 2 cut(s) 601, 823
Vha464I CTTAAG 1 cut(s) 317
VneI GTGCAC 1 cut(s) 602
XceI RCATGY 1 cut(s) 106
XhoI CTCGAG 1 cut(s) 488
XmnI GAANNNNTTC 1 cut(s) 501
XspI CTAG 1 cut(s) 782
ZraI GACGTC 1 cut(s) 238
Zsp2I ATGCAT 1 cut(s) 571
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.