Rorug05G0247800
MYB Family

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000240
Physical Location & Seq
Reverse (-)
27147551 .. 27149493
1943 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0247800.1

Sequence Viewer

Length: 1326 bp
ATGGGAGCCTGGCTCCTTATACCCTTCTCCGTCTTCCTCACTTTCACCCTAAAGTTCATCCTCTTCCCCTACAAACCCTCCCACAAACTCAACGCCCCACTCCCTCCGGGTCCCACCACCATACCCGTCGTCGGCACCTTCATATGGCTCTTCAAACTCGCCTCCCGCGGCATCGAACCCGTCCTCCGTGACCTACATGCCACGTACGGCGGCATCATCTCTGTCCCCGTCCCCTTCTCTTACCCCGTCATCATGATCGCCGACCGCTCCCTCGCCCACCAAGCCCTTGTCAACAACGGTGCCGTTTTTGCCGACCGCCCTGAGGTCCAACCATCCATCAAGTTCATCACCAGCAACCAACGCATCATCGCCACCTCTGGCTACGGCTCTACGTGGCGCCTCCTGCGCCGGAACCTCGTCTCTGAGCTCATGGTTCCGTCTCGGCTCAAGGCCTTGGCCGGTTCCCGGAAGTGGGCCCTAGACAGCCTAGCTAGCCGTCTTGCAACGTCGTCGTCATCGGGACGTAACATGGTGGGAGTTTTGGATCATTTCCGGATGTCCATGACGGGTTTGTTTCTGTACATGTGTTTTGGTGAGAAGATGGAGGAGGAGAAGGTGAGAGAAATTGTGGACGTTCAGCGTCGGCTTCTGTTGGGTTTGGTCCGAGAGTTTCAGATTCTCAACTTTGGGCCTGCATGGTTTACCAAGATTTTGTTTTATAAGCGGTACATGGTGGAGTCGCTTCTTCCAGATTCTCCAGCAGCAAATAAACCTCCTGCTGCCTCTGATACAAGCACGGAAGAAGCAATTCATCCATACTATTGTTATATGCCGCCACCAACAGCAAGTTCAAAGATAAAGGAAAGAAAATGCTCGAGTAACCGAAAAGAAGATAACAACAACAATCAAGCATTTGTTGATACCTTAATGGATTTAGAACTCCCCGACGAGAAAAGAACATTCGATGAAGTAGAAGTGGTGAACCAATGCTCGGATTTCCTCAACTCCGGCGTAGACACAATTGCCATAACACTGCAATGGATGATGGCAAACATAGTGAAACACCCACGCATTCAAGACAAACTTGTCACAGAAATTAGACAAATTGTGGGAGATGGAGAAGTTGAAGAGGTGGAAGAGGAGAACCTGCACAGAATGAAGTATTTAAAAGCGGTTGTGCTAGAAGGTCTGCGTCTTCACCCGCCGTCGCACTTTTTGCTTCCGCACTCTGTCACTGAGGACTTCATTTTGGACGGGCGTTACGTTGTGCCAAAGGACTGCACTGTGAACTTCTCTGTGGCGGAGATGGGGCGGGATCCGTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-bind_3

Protein Analysis

441

Amino Acids

49.84

Weight (kDa)

7.15

Isoelectric Point (pI)

47.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 35 - 234 1.7e-13 Cytochrome P450
p450 PF00067 283 - 440 4.7e-36 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000240)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G11300
fragaria_vesca FvH4_1g19130 FvH4_1g28413 FvH4_2g11122 FvH4_3g19652 FvH4_3g29921 FvH4_4g07761 FvH4_4g20923 FvH4_5g23913 FvH4_5g23913 FvH4_6g38850 FvH4_6g39920 FvH4_6g53022 FvH4_7g00070 FvH4_7g08972 FvH4_7g12221
malus_domestica MD06G1090800.v1.1 MD15G1314200.v1.1 MD16G1231800.v1.1
prunus_persica Prupe.1G173000_v2.0.a1 Prupe.4G113600_v2.0.a1 Prupe.5G020800_v2.0.a1 Prupe.5G020800_v2.0.a1 Prupe.5G020800_v2.0.a1 Prupe.5G207000_v2.0.a1 Prupe.6G155900_v2.0.a1 Prupe.8G016500_v2.0.a1
pyrus_communis pycom03g16230 pycom04g16130 pycom05g03970 pycom05g10500 pycom08g06480 pycom08g11770 pycom12g11350 pycom12g18510 pycom13g02550 pycom13g13780 pycom13g27450 pycom13g27460 pycom15g26130 pycom15g27470
rosa_chinensis RchiOBHm_Chr2g0103961 RchiOBHm_Chr2g0128681 RchiOBHm_Chr2g0153151 RchiOBHm_Chr3g0459461 RchiOBHm_Chr4g0406011 RchiOBHm_Chr4g0428601 RchiOBHm_Chr5g0029731 RchiOBHm_Chr5g0069971 RchiOBHm_Chr6g0253171 RchiOBHm_Chr6g0254701 RchiOBHm_Chr7g0199281
rosa_laevigata RLG00000002281 RLG00000007586 RLG00000008509 RLG00000008888 RLG00000009501 RLG00000012763
rosa_multiflora Rmu_sc0000008.1_g000009 Rmu_sc0000079.1_g000058 Rmu_sc0000117.1_g000008 Rmu_sc0000151.1_g000009 Rmu_sc0000166.1_g000053 Rmu_sc0000240.1_g000064 Rmu_sc0000435.1_g000013 Rmu_sc0000552.1_g000019 Rmu_sc0000776.1_g000078 Rmu_sc0001597.1_g000012 Rmu_sc0001759.1_g000017 Rmu_sc0002137.1_g000011 Rmu_sc0002933.1_g000006 Rmu_sc0002938.1_g000049 Rmu_sc0003257.1_g000014 Rmu_sc0003465.1_g000054 Rmu_sc0003505.1_g000025 Rmu_sc0003526.1_g000016 Rmu_sc0003829.1_g000021 Rmu_sc0003855.1_g000002 Rmu_sc0005514.1_g000003 Rmu_sc0005514.1_g000004 Rmu_sc0007820.1_g000001 Rmu_sc0008322.1_g000016 Rmu_sc0008636.1_g000003 Rmu_sc0008812.1_g000009 Rmu_sc0010960.1_g000003 Rmu_sc0011753.1_g000001 Rmu_sc0013017.1_g000001 Rmu_sc0013176.1_g000005 Rmu_sc0015928.1_g000001 Rmu_sc0020751.1_g000003 Rmu_sc0038865.1_g000001 Rmu_ssc0000089.1_g000008 Rmu_ssc0000164.1_g000007 Rmu_ssc0000388.1_g000013 Rmu_ssc0000400.1_g000076 Rmu_ssc0000486.1_g000012
rosa_roxburghii Rroxscaffold_1G00005880 Rroxscaffold_1G00051030 Rroxscaffold_2G00107440 Rroxscaffold_2G00115370 Rroxscaffold_2G00115870 Rroxscaffold_2G00146360 Rroxscaffold_3G00228870 Rroxscaffold_3G00230350 Rroxscaffold_3G00246190 Rroxscaffold_6G00423350 Rroxscaffold_7G00157820 Rroxscaffold_7G00184840 Rroxscaffold_7G00186490
rosa_rugosa Rorug02G0248700 Rorug02G0279900 Rorug02G0285600 Rorug02G0285700 Rorug03G0068700 Rorug03G0077100 Rorug03G0247700 Rorug03G0304800 Rorug04G0059600 Rorug05G0104000 Rorug05G0104000 Rorug05G0192000 Rorug05G0247800 Rorug05G0248000 Rorug06G0064100 Rorug06G0244800
rosa_samantha Rh4BG200400 Rh4CG094600 Rh4CG114400 Rh5BG465300 Rh6AG057500
rosa_wichuraiana Rw1G014470 Rw2G026930 Rw5G042730 Rw6G021090 Rw6G022960 Rw6G025470 Rw6G034450 Rw7G034300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 720
AasI GACNNNNNNGTC 1 cut(s) 1085
Acc36I ACCTGC 1 cut(s) 1155
AccB1I GGYRCC 3 cut(s) 134, 299, 396
AccBSI CCGCTC 1 cut(s) 267
AccI GTMKAC 1 cut(s) 1014
AccII CGCG 1 cut(s) 168
AccIII TCCGGA 1 cut(s) 552
AclWI GGATC 3 cut(s) 552, 1310, 1323
AcoI YGGCCR 1 cut(s) 456
AcyI GRCGYC 1 cut(s) 397
AfaI GTAC 3 cut(s) 206, 581, 728
AfiI CCNNNNNNNGG 7 cut(s) 131, 144, 322, 465, 471, 472, 991
AflIII ACRYGT 1 cut(s) 582
AgsI TTSAA 4 cut(s) 154, 852, 1076, 1127
AjnI CCWGG 1 cut(s) 8
AjuI GAANNNNNNNTTGG 2 cut(s) 832, 864
AloI GAACNNNNNNTCC 2 cut(s) 168, 200
AluBI AGCT 2 cut(s) 427, 491
AluI AGCT 2 cut(s) 427, 491
Alw21I GWGCWC 1 cut(s) 429
Alw26I GTCTC 2 cut(s) 424, 444
AlwI GGATC 3 cut(s) 552, 1310, 1323
Ama87I CYCGRG 1 cut(s) 874
Aor13HI TCCGGA 1 cut(s) 552
AoxI GGCC 4 cut(s) 450, 456, 474, 689
ApaI GGGCCC 1 cut(s) 478
ApeKI GCWGC 2 cut(s) 761, 779
Asp700I GAANNNNTTC 1 cut(s) 807
AspLEI GCGC 2 cut(s) 399, 408
AspS9I GGNCC 6 cut(s) 110, 325, 474, 475, 661, 689
AsuC2I CCSGG 2 cut(s) 108, 466
AsuHPI GGTGA 6 cut(s) 37, 340, 605, 628, 991, 1190
AsuNHI GCTAGC 1 cut(s) 491
AvaI CYCGRG 1 cut(s) 874
AvaII GGWCC 3 cut(s) 110, 325, 661
AxyI CCTNAGG 1 cut(s) 321
BaeGI GKGCMC 1 cut(s) 478
BamHI GGATCC 1 cut(s) 1315
BanI GGYRCC 3 cut(s) 134, 299, 396
BanII GRGCYC 2 cut(s) 429, 478
BbsI GAAGAC 2 cut(s) 25, 1187
Bbv12I GWGCWC 1 cut(s) 429
BbvI GCAGC 2 cut(s) 766, 773
BccI CCATC 6 cut(s) 340, 344, 595, 1039, 1109, 1300
BceAI ACGGC 5 cut(s) 223, 287, 400, 480, 1189
BcgI CGANNNNNNTGC 2 cut(s) 492, 526
BciT130I CCWGG 1 cut(s) 10
BcnI CCSGG 2 cut(s) 108, 466
BcoDI GTCTC 2 cut(s) 424, 444
BfaI CTAG 4 cut(s) 479, 488, 492, 1181
BfoI RGCGCY 1 cut(s) 400
BfuAI ACCTGC 1 cut(s) 1155
BisI GCNGC 5 cut(s) 169, 211, 762, 780, 833
BlsI GCNGC 5 cut(s) 170, 212, 763, 781, 834
Bme1390I CCNGG 3 cut(s) 10, 108, 466
Bme18I GGWCC 3 cut(s) 110, 325, 661
BmeT110I CYCGRG 1 cut(s) 874
BmgT120I GGNCC 6 cut(s) 110, 325, 474, 475, 661, 689
BmrFI CCNGG 3 cut(s) 10, 108, 466
BmsI GCATC 3 cut(s) 180, 222, 372
BmtI GCTAGC 1 cut(s) 495
BpiI GAAGAC 2 cut(s) 25, 1187
BplI GAGNNNNNCTC 1 cut(s) 29
BpmI CTGGAG 1 cut(s) 741
BpuEI CTTGAG 1 cut(s) 431
BpuMI CCSGG 2 cut(s) 108, 466
BsaAI YACGTR 2 cut(s) 204, 393
BsaHI GRCGYC 1 cut(s) 397
BsaJI CCNNGG 2 cut(s) 166, 453
BsaWI WCCGGW 1 cut(s) 552
BsaXI ACNNNNNCTCC 4 cut(s) 62, 92, 168, 198
Bsc4I CCNNNNNNNGG 7 cut(s) 131, 144, 322, 465, 471, 472, 991
Bse118I RCCGGY 1 cut(s) 458
Bse21I CCTNAGG 1 cut(s) 321
Bse3DI GCAATG 1 cut(s) 1043
BseAI TCCGGA 1 cut(s) 552
BseBI CCWGG 1 cut(s) 10
BseDI CCNNGG 2 cut(s) 166, 453
BseGI GGATG 5 cut(s) 57, 332, 561, 811, 1047
BseLI CCNNNNNNNGG 7 cut(s) 131, 144, 322, 465, 471, 472, 991
BseMI GCAATG 1 cut(s) 1043
BseMII CTCAG 3 cut(s) 312, 414, 1227
BseRI GAGGAG 3 cut(s) 620, 623, 1154
BseSI GKGCMC 1 cut(s) 478
BseXI GCAGC 2 cut(s) 766, 773
BsgI GTGCAG 2 cut(s) 1133, 1264
Bsh1236I CGCG 1 cut(s) 168
Bsh1285I CGRYCG 2 cut(s) 265, 316
BshFI GGCC 4 cut(s) 452, 458, 476, 691
BshNI GGYRCC 3 cut(s) 134, 299, 396
BsiEI CGRYCG 2 cut(s) 265, 316
BsiHKAI GWGCWC 1 cut(s) 429
BsiHKCI CYCGRG 1 cut(s) 874
BsiSI CCGG 6 cut(s) 107, 409, 459, 466, 553, 1008
BsiWI CGTACG 1 cut(s) 204
BslFI GGGAC 4 cut(s) 96, 209, 215, 534
BslI CCNNNNNNNGG 7 cut(s) 131, 144, 322, 465, 471, 472, 991
BsmAI GTCTC 2 cut(s) 424, 444
BsmBI CGTCTC 2 cut(s) 424, 444
BsmFI GGGAC 4 cut(s) 96, 209, 215, 534
BsmI GAATGC 1 cut(s) 1071
BsnI GGCC 4 cut(s) 452, 458, 476, 691
BsoBI CYCGRG 1 cut(s) 874
Bsp120I GGGCCC 1 cut(s) 474
Bsp1286I GDGCHC 2 cut(s) 429, 478
Bsp13I TCCGGA 1 cut(s) 552
Bsp1407I TGTACA 1 cut(s) 579
Bsp143I GATC 3 cut(s) 255, 544, 1315
BspANI GGCC 4 cut(s) 452, 458, 476, 691
BspCNI CTCAG 3 cut(s) 313, 415, 1228
BspEI TCCGGA 1 cut(s) 552
BspFNI CGCG 1 cut(s) 168
BspHI TCATGA 1 cut(s) 252
BspMI ACCTGC 1 cut(s) 1155
BspOI GCTAGC 1 cut(s) 495
BspPI GGATC 3 cut(s) 552, 1310, 1323
BspQI GCTCTTC 1 cut(s) 155
BspT107I GGYRCC 3 cut(s) 134, 299, 396
BsrBI CCGCTC 1 cut(s) 267
BsrDI GCAATG 1 cut(s) 1043
BsrFI RCCGGY 1 cut(s) 458
BsrGI TGTACA 1 cut(s) 579
BssAI RCCGGY 1 cut(s) 458
BssECI CCNNGG 2 cut(s) 166, 453
BssMI GATC 3 cut(s) 255, 544, 1315
BssNI GRCGYC 1 cut(s) 397
BssT1I CCWWGG 1 cut(s) 453
Bst2UI CCWGG 1 cut(s) 10
Bst4CI ACNGT 2 cut(s) 299, 1285
Bst6I CTCTTC 4 cut(s) 68, 155, 1122, 1131
BstACI GRCGYC 1 cut(s) 397
BstAPI GCANNNNNTGC 1 cut(s) 1216
BstAUI TGTACA 1 cut(s) 579
BstBAI YACGTR 2 cut(s) 204, 393
BstC8I GCNNGC 2 cut(s) 493, 693
BstDEI CTNAG 3 cut(s) 321, 423, 1236
BstDSI CCRYGG 1 cut(s) 166
BstF5I GGATG 5 cut(s) 57, 332, 561, 811, 1047
BstFNI CGCG 1 cut(s) 168
BstH2I RGCGCY 1 cut(s) 400
BstHHI GCGC 2 cut(s) 399, 408
BstKTI GATC 3 cut(s) 258, 547, 1318
BstMAI GTCTC 2 cut(s) 424, 444
BstMBI GATC 3 cut(s) 255, 544, 1315
BstMCI CGRYCG 2 cut(s) 265, 316
BstMWI GCNNNNNNNGC 7 cut(s) 281, 308, 360, 403, 405, 492, 1216
BstNI CCWGG 1 cut(s) 10
BstNSI RCATGY 2 cut(s) 200, 586
BstSCI CCNGG 3 cut(s) 8, 106, 464
BstSLI GKGCMC 1 cut(s) 478
BstUI CGCG 1 cut(s) 168
BstV1I GCAGC 2 cut(s) 766, 773
BstV2I GAAGAC 2 cut(s) 25, 1187
BstX2I RGATCY 1 cut(s) 1315
BstYI RGATCY 1 cut(s) 1315
Bsu36I CCTNAGG 1 cut(s) 321
BsuRI GGCC 4 cut(s) 452, 458, 476, 691
BtgI CCRYGG 1 cut(s) 166
BtgZI GCGATG 1 cut(s) 352
BtsCI GGATG 5 cut(s) 57, 332, 561, 811, 1047
BtsI GCAGTG 1 cut(s) 1031
BtsIMutI CAGTG 3 cut(s) 1031, 1233, 1281
BveI ACCTGC 1 cut(s) 1155
Cac8I GCNNGC 2 cut(s) 493, 693
CciI TCATGA 1 cut(s) 252
CfoI GCGC 2 cut(s) 399, 408
Cfr10I RCCGGY 1 cut(s) 458
Cfr13I GGNCC 6 cut(s) 110, 325, 474, 475, 661, 689
Cfr42I CCGCGG 1 cut(s) 169
CseI GACGC 2 cut(s) 629, 1181
Csp6I GTAC 3 cut(s) 205, 580, 727
CviAII CATG 8 cut(s) 197, 253, 430, 529, 562, 583, 696, 730
CviQI GTAC 3 cut(s) 205, 580, 727
DdeI CTNAG 3 cut(s) 321, 423, 1236
DinI GGCGCC 1 cut(s) 398
DpnI GATC 3 cut(s) 257, 546, 1317
DpnII GATC 3 cut(s) 255, 544, 1315
DraI TTTAAA 1 cut(s) 1167
DrdI GACNNNNNNGTC 1 cut(s) 1085
DseDI GACNNNNNNGTC 1 cut(s) 1085
EaeI YGGCCR 1 cut(s) 456
Eam1104I CTCTTC 4 cut(s) 68, 155, 1122, 1131
EarI CTCTTC 4 cut(s) 68, 155, 1122, 1131
EciI GGCGGA 1 cut(s) 1316
Ecl136II GAGCTC 1 cut(s) 427
Eco130I CCWWGG 1 cut(s) 453
Eco147I AGGCCT 1 cut(s) 452
Eco24I GRGCYC 2 cut(s) 429, 478
Eco47I GGWCC 3 cut(s) 110, 325, 661
Eco53kI GAGCTC 1 cut(s) 427
Eco81I CCTNAGG 1 cut(s) 321
Eco88I CYCGRG 1 cut(s) 874
EcoICRI GAGCTC 1 cut(s) 427
EcoO109I RGGNCCY 2 cut(s) 110, 475
EcoRII CCWGG 1 cut(s) 8
EcoT14I CCWWGG 1 cut(s) 453
EcoT38I GRGCYC 2 cut(s) 429, 478
EgeI GGCGCC 1 cut(s) 398
EheI GGCGCC 1 cut(s) 398
ErhI CCWWGG 1 cut(s) 453
Esp3I CGTCTC 2 cut(s) 424, 444
FaeI CATG 8 cut(s) 200, 256, 433, 532, 565, 586, 699, 733
FalI AAGNNNNNCTT 2 cut(s) 1068, 1100
FaqI GGGAC 4 cut(s) 96, 209, 215, 534
FatI CATG 8 cut(s) 196, 252, 429, 528, 561, 582, 695, 729
FauI CCCGC 3 cut(s) 173, 1209, 1305
FauNDI CATATG 1 cut(s) 143
FblI GTMKAC 1 cut(s) 1014
Fnu4HI GCNGC 5 cut(s) 169, 211, 762, 780, 833
FokI GGATG 5 cut(s) 44, 319, 568, 798, 1054
FriOI GRGCYC 2 cut(s) 429, 478
Fsp4HI GCNGC 5 cut(s) 169, 211, 762, 780, 833
FspBI CTAG 4 cut(s) 479, 488, 492, 1181
GlaI GCGC 2 cut(s) 398, 407
GluI GCNGC 5 cut(s) 169, 211, 762, 780, 833
GsuI CTGGAG 1 cut(s) 741
HaeII RGCGCY 1 cut(s) 400
HaeIII GGCC 4 cut(s) 452, 458, 476, 691
HapII CCGG 6 cut(s) 107, 409, 459, 466, 553, 1008
HgaI GACGC 2 cut(s) 629, 1181
HhaI GCGC 2 cut(s) 399, 408
Hin1I GRCGYC 1 cut(s) 397
Hin1II CATG 8 cut(s) 200, 256, 433, 532, 565, 586, 699, 733
Hin6I GCGC 2 cut(s) 397, 406
HinP1I GCGC 2 cut(s) 397, 406
HincII GTYRAC 1 cut(s) 292
HindII GTYRAC 1 cut(s) 292
HinfI GANTC 3 cut(s) 676, 737, 752
HpaII CCGG 6 cut(s) 107, 409, 459, 466, 553, 1008
HphI GGTGA 6 cut(s) 37, 340, 605, 628, 991, 1190
Hpy166II GTNNAC 6 cut(s) 292, 631, 702, 982, 1015, 1288
Hpy188I TCNGA 5 cut(s) 424, 665, 675, 787, 994
Hpy188III TCNNGA 5 cut(s) 253, 519, 553, 749, 1076
Hpy8I GTNNAC 6 cut(s) 292, 631, 702, 982, 1015, 1288
Hpy99I CGWCG 7 cut(s) 131, 134, 511, 514, 645, 950, 1210
HpyAV CCTTC 5 cut(s) 34, 148, 244, 607, 1178
HpyCH4III ACNGT 2 cut(s) 299, 1285
HpyCH4IV ACGT 6 cut(s) 203, 392, 506, 523, 633, 1263
HpyCH4V TGCA 5 cut(s) 503, 695, 1036, 1150, 1281
HpyF10VI GCNNNNNNNGC 7 cut(s) 281, 308, 360, 403, 405, 492, 1216
HpyF3I CTNAG 3 cut(s) 321, 423, 1236
HpySE526I ACGT 6 cut(s) 203, 392, 506, 523, 633, 1263
Hsp92I GRCGYC 1 cut(s) 397
Hsp92II CATG 8 cut(s) 200, 256, 433, 532, 565, 586, 699, 733
HspAI GCGC 2 cut(s) 397, 406
KasI GGCGCC 1 cut(s) 396
KflI GGGWCCC 1 cut(s) 110
Kpn2I TCCGGA 1 cut(s) 552
KspI CCGCGG 1 cut(s) 169
Kzo9I GATC 3 cut(s) 255, 544, 1315
LguI GCTCTTC 1 cut(s) 155
LmnI GCTCC 3 cut(s) 5, 18, 272
Lsp1109I GCAGC 2 cut(s) 766, 773
LweI GCATC 3 cut(s) 180, 222, 372
MaeI CTAG 4 cut(s) 479, 488, 492, 1181
MaeII ACGT 6 cut(s) 203, 392, 506, 523, 633, 1263
MaeIII GTNAC 6 cut(s) 188, 524, 878, 1087, 1231, 1259
MalI GATC 3 cut(s) 257, 546, 1317
MbiI CCGCTC 1 cut(s) 267
MboI GATC 3 cut(s) 255, 544, 1315
MfeI CAATTG 1 cut(s) 1020
MflI RGATCY 1 cut(s) 1315
MhlI GDGCHC 2 cut(s) 429, 478
MluCI AATT 5 cut(s) 624, 807, 1020, 1095, 1104
Mly113I GGCGCC 1 cut(s) 397
MlyI GAGTC 1 cut(s) 746
MmeI TCCRAC 1 cut(s) 352
MroI TCCGGA 1 cut(s) 552
MroXI GAANNNNTTC 1 cut(s) 807
MseI TTAA 3 cut(s) 926, 1166, 1324
MslI CAYNNNNRTG 1 cut(s) 1036
MspA1I CMGCKG 1 cut(s) 168
MspI CCGG 6 cut(s) 107, 409, 459, 466, 553, 1008
MspR9I CCNGG 3 cut(s) 10, 108, 466
MunI CAATTG 1 cut(s) 1020
Mva1269I GAATGC 1 cut(s) 1071
MvaI CCWGG 1 cut(s) 10
MvnI CGCG 1 cut(s) 168
MwoI GCNNNNNNNGC 7 cut(s) 281, 308, 360, 403, 405, 492, 1216
NarI GGCGCC 1 cut(s) 397
NciI CCSGG 2 cut(s) 108, 466
NdeI CATATG 1 cut(s) 143
NdeII GATC 3 cut(s) 255, 544, 1315
NheI GCTAGC 1 cut(s) 491
NlaIII CATG 8 cut(s) 200, 256, 433, 532, 565, 586, 699, 733
NmeAIII GCCGAG 1 cut(s) 421
NmuCI GTSAC 3 cut(s) 188, 1087, 1231
NspI RCATGY 2 cut(s) 200, 586
PaeR7I CTCGAG 1 cut(s) 874
PagI TCATGA 1 cut(s) 252
PceI AGGCCT 1 cut(s) 452
PciI ACATGT 1 cut(s) 582
PciSI GCTCTTC 1 cut(s) 155
PcsI WCGNNNNNNNCGW 1 cut(s) 1260
PctI GAATGC 1 cut(s) 1071
PdmI GAANNNNTTC 1 cut(s) 807
PfeI GAWTC 2 cut(s) 676, 752
Pfl23II CGTACG 1 cut(s) 204
PfoI TCCNGGA 1 cut(s) 464
PkrI GCNGC 5 cut(s) 170, 212, 763, 781, 834
PleI GAGTC 1 cut(s) 745
PluTI GGCGCC 1 cut(s) 400
PpsI GAGTC 1 cut(s) 745
Ppu21I YACGTR 2 cut(s) 204, 393
PpuMI RGGWCCY 1 cut(s) 110
PscI ACATGT 1 cut(s) 582
PsiI TTATAA 1 cut(s) 720
Psp124BI GAGCTC 1 cut(s) 429
Psp5II RGGWCCY 1 cut(s) 110
Psp6I CCWGG 1 cut(s) 8
PspGI CCWGG 1 cut(s) 8
PspLI CGTACG 1 cut(s) 204
PspOMI GGGCCC 1 cut(s) 474
PspPI GGNCC 6 cut(s) 110, 325, 474, 475, 661, 689
PspPPI RGGWCCY 1 cut(s) 110
PspXI VCTCGAGB 1 cut(s) 874
PsuI RGATCY 1 cut(s) 1315
RsaI GTAC 3 cut(s) 206, 581, 728
RsaNI GTAC 3 cut(s) 205, 580, 727
RseI CAYNNNNRTG 1 cut(s) 1036
SacI GAGCTC 1 cut(s) 429
SacII CCGCGG 1 cut(s) 169
SapI GCTCTTC 1 cut(s) 155
SaqAI TTAA 3 cut(s) 926, 1166, 1324
SatI GCNGC 5 cut(s) 169, 211, 762, 780, 833
Sau3AI GATC 3 cut(s) 255, 544, 1315
Sau96I GGNCC 6 cut(s) 110, 325, 474, 475, 661, 689
SchI GAGTC 1 cut(s) 746
ScrFI CCNGG 3 cut(s) 10, 108, 466
SduI GDGCHC 2 cut(s) 429, 478
SfaNI GCATC 3 cut(s) 180, 222, 372
SfoI GGCGCC 1 cut(s) 398
Sfr274I CTCGAG 1 cut(s) 874
Sfr303I CCGCGG 1 cut(s) 169
SgrBI CCGCGG 1 cut(s) 169
SinI GGWCC 3 cut(s) 110, 325, 661
SlaI CTCGAG 1 cut(s) 874
SmiMI CAYNNNNRTG 1 cut(s) 1036
SmlI CTYRAG 2 cut(s) 446, 874
SmoI CTYRAG 2 cut(s) 446, 874
Sse9I AATT 5 cut(s) 624, 807, 1020, 1095, 1104
SseBI AGGCCT 1 cut(s) 452
SspDI GGCGCC 1 cut(s) 396
SspMI CTAG 4 cut(s) 479, 488, 492, 1181
SstI GAGCTC 1 cut(s) 429
StuI AGGCCT 1 cut(s) 452
StyD4I CCNGG 3 cut(s) 8, 106, 464
StyI CCWWGG 1 cut(s) 453
TaaI ACNGT 2 cut(s) 299, 1285
TaiI ACGT 6 cut(s) 206, 395, 509, 526, 636, 1266
TaqI TCGA 3 cut(s) 174, 875, 963
TasI AATT 5 cut(s) 624, 807, 1020, 1095, 1104
TatI WGTACW 1 cut(s) 579
TauI GCSGC 3 cut(s) 171, 213, 835
TfiI GAWTC 2 cut(s) 676, 752
Tru1I TTAA 3 cut(s) 926, 1166, 1324
Tru9I TTAA 3 cut(s) 926, 1166, 1324
TscAI CASTG 3 cut(s) 1038, 1240, 1288
TseFI GTSAC 3 cut(s) 188, 1087, 1231
TseI GCWGC 2 cut(s) 761, 779
Tsp45I GTSAC 3 cut(s) 188, 1087, 1231
TspDTI ATGAA 7 cut(s) 46, 130, 334, 800, 981, 1172, 1234
TspGWI ACGGA 5 cut(s) 19, 176, 426, 812, 1308
TspRI CASTG 3 cut(s) 1038, 1240, 1288
VpaK11BI GGWCC 3 cut(s) 110, 325, 661
XceI RCATGY 2 cut(s) 200, 586
XhoI CTCGAG 1 cut(s) 874
XmiI GTMKAC 1 cut(s) 1014
XmnI GAANNNNTTC 1 cut(s) 807
XspI CTAG 4 cut(s) 479, 488, 492, 1181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.