Rorug05G0192000
MYB Family

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000157
Physical Location & Seq
Forward (+)
18659500 .. 18815849
156350 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0192000.1

Sequence Viewer

Length: 1698 bp
ATGGATCCTTACCTGTATGAGGCGGCGACGCTCGGAGATGTCAGCTTCATGAGAAGAATCAGAGACGGCGACGTATTACTAAACCACGATCTTCTCCTTCAGAAAACGCCTAAAGACAACAACATCCTTCACATCGCCGCCGAATTCAAACAGATTGAGTTTTTCAGACAAGTCCCCAGTCATTATTCTCCTGCTCTGTTTTGGGCTGCCAACAAAAAGGGCGACACTCCTCTGCACGTGGCCGCTAGAGTAGGCTGTGATGAAATAGTCGAGTTCCTTATCCATCAGGCGAAAGCGCTGCACATAAGAGGAGCTGATGAGGAAAGCTGTCATCGAAAGCCGCTACTTCGGATGACGAATTTAGAAATGGATACGGCTCTGCATGTGGCTGTGCGGTACGGTCATCTGCTTGGAGTGGTGGTTCTGTTAATGGAAGCCGATCCTGAACTGTGTTGTTTGACTAACAGGGCAGATGAATCGGTTTTGTTCTTGGCTGCTAGGAAGGGGTCTGCAGAGATTGCTCTTTATCTGTTGAACGAGTCTCCGGTGTGTCCTTGTTTTCGAGGGACTAATGGTGTGACGGCTTTGCACGCCGCTGTAACTCGCAGCAACCTCACCAGCAAAGGCATTGTGAGGACTATGGTGTCCAAAAATCCTGAGATGATTAAAAATGTCGATGCACTTGGCTGGACACCGTTACACTATGCAGCATTTAGAGGGAACCTTGAAGCGACTAGAGTGCTAATGCAATGCGATAGTTCTGCATCTTACATCTTAGACAACTCTGGAATGTCAGCTCTCCATGTAGCAGCCCATGCCGGCCACACCAAAATAATGGAGGAGCTGTTTCGGTGGCGGCCCGATATTTGTGATCTGCTGAATGACAAAGACCAAACGGCTTTACATGCTGCAGTATTAGGAGCAAGAGTTAATGTTGTGGAGTACATATTGAAGACGCCTAAGCTTGCGGCGATTATAAACGAAGCAGATAAAGATGGAAACACTCCCTTGCACTTAGCTGCCCTTCACCAAAATGATAAAATCATAAAAGTTCTGTCTGGCGATCGGAGAGTGGACATGATTGCTATTAATAAGGAATTCTCGATGCCCACCGACATGTTTCTTGGTGACAATATTATTGGTGAACAGGAAACAATTCGCCGTGGTATGGTTTTGCACAACCTGGGGTGCTCTGTTGGCGTGCCATTTTTCCAACAACAAATCAGTCGTGACGTCGACAAAGTGGAACCACTAGAGAAGGACACAGACAAGATCAGAGAAAACCAGCTGCAGGCTCCTCTGGATGATCGTAATGCCTTAGAAAGAGATGACACCAAACTACTTGTTGCAACGCTCATTGCAACTGTCACGTTTGCAGCATCTTTCACCAGCGTGCCTGGAGGATTTAAAGACGATGGAATGCCTATTTTATATGACAAGGCCGCTTTCAAAGTGTTTCAGTTTTTCAATGCAGCGTCCTTCTACATCTCAATTCTTGCAATCTATAACGAATCAACTCCGATAACTGTGTTATCCATCCATCTACCCACACCATCAAGTCTCATTCAGTATTCTATTGGAGGAATGGTGGTTGCATTTTTTTCGGGCACATTAGCAGTGCAGCCGAGACGTAGTCACGGAAATTTGTTTGAATTTATATTTGGGGAAAGAGGATCCACTGGTTTCGAAACCGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

565

Amino Acids

62.6

Weight (kDa)

5.99

Isoelectric Point (pI)

33.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 28 - 96 1.8e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 43 - 148 4.2e-09 Ankyrin repeats (3 copies)
Ank PF00023 74 - 97 7e-06 Ankyrin repeat
Ank_2 PF12796 127 - 217 9.5e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 209 - 284 1e-11 Ankyrin repeats (3 copies)
Ank_4 PF13637 267 - 316 9.8e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 292 - 353 2.1e-09 Ankyrin repeats (3 copies)
PGG PF13962 442 - 539 6e-18 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 977
AasI GACNNNNNNGTC 1 cut(s) 643
AatII GACGTC 1 cut(s) 1236
AccI GTMKAC 1 cut(s) 1236
AciI CCGC 9 cut(s) 23, 138, 243, 341, 394, 594, 856, 968, 1443
AclWI GGATC 4 cut(s) 12, 434, 1668, 1681
AcoI YGGCCR 2 cut(s) 240, 820
AcsI RAATTY 5 cut(s) 143, 358, 1097, 1642, 1652
AcuI CTGAAG 1 cut(s) 83
AcvI CACGTG 1 cut(s) 238
AcyI GRCGYC 2 cut(s) 956, 1233
AfaI GTAC 2 cut(s) 398, 944
AfeI AGCGCT 1 cut(s) 297
AfiI CCNNNNNNNGG 3 cut(s) 19, 1168, 1291
AflIII ACRYGT 1 cut(s) 1116
AgsI TTSAA 7 cut(s) 148, 535, 728, 952, 1450, 1468, 1652
AjnI CCWGG 2 cut(s) 1182, 1396
AjuI GAANNNNNNNTTGG 2 cut(s) 1644, 1676
AleI CACNNNNGTG 1 cut(s) 1391
AloI GAACNNNNNNTCC 2 cut(s) 405, 437
AluBI AGCT 8 cut(s) 45, 314, 327, 797, 844, 964, 1019, 1288
AluI AGCT 8 cut(s) 45, 314, 327, 797, 844, 964, 1019, 1288
Alw21I GWGCWC 1 cut(s) 1193
Alw26I GTCTC 4 cut(s) 57, 546, 1565, 1621
AlwI GGATC 4 cut(s) 12, 434, 1668, 1681
Aor51HI AGCGCT 1 cut(s) 297
AoxI GGCC 4 cut(s) 240, 820, 857, 1440
ApoI RAATTY 5 cut(s) 143, 358, 1097, 1642, 1652
AseI ATTAAT 1 cut(s) 1089
Asp700I GAANNNNTTC 1 cut(s) 1155
AspLEI GCGC 1 cut(s) 298
AspS9I GGNCC 1 cut(s) 858
AsuHPI GGTGA 5 cut(s) 607, 1019, 1139, 1154, 1378
AsuII TTCGAA 1 cut(s) 1686
BaeGI GKGCMC 1 cut(s) 1610
BamHI GGATCC 2 cut(s) 4, 1673
BbrPI CACGTG 1 cut(s) 238
BbsI GAAGAC 1 cut(s) 959
Bbv12I GWGCWC 1 cut(s) 1193
BccI CCATC 6 cut(s) 291, 989, 1409, 1544, 1548, 1561
BceAI ACGGC 5 cut(s) 82, 390, 597, 912, 1146
BciT130I CCWGG 2 cut(s) 1184, 1398
BciVI GTATCC 1 cut(s) 364
BcoDI GTCTC 4 cut(s) 57, 546, 1565, 1621
BfaI CTAG 4 cut(s) 246, 498, 735, 1253
BfmI CTRYAG 3 cut(s) 510, 909, 1289
BfoI RGCGCY 1 cut(s) 299
BfuI GTATCC 1 cut(s) 364
Bme1390I CCNGG 2 cut(s) 1184, 1398
BmgT120I GGNCC 1 cut(s) 858
BmiI GGNNCC 5 cut(s) 6, 722, 1248, 1296, 1675
BmrFI CCNGG 2 cut(s) 1184, 1398
BmrI ACTGGG 1 cut(s) 171
BmsI GCATC 4 cut(s) 667, 773, 1095, 1388
BmuI ACTGGG 1 cut(s) 171
BpiI GAAGAC 1 cut(s) 959
BpmI CTGGAG 1 cut(s) 1419
Bpu10I CCTNAGC 1 cut(s) 960
Bpu14I TTCGAA 1 cut(s) 1686
BsaAI YACGTR 1 cut(s) 238
BsaHI GRCGYC 2 cut(s) 956, 1233
BsaJI CCNNGG 2 cut(s) 1162, 1183
BsaWI WCCGGW 1 cut(s) 544
BsaXI ACNNNNNCTCC 8 cut(s) 405, 435, 830, 860, 912, 942, 1572, 1602
Bsc4I CCNNNNNNNGG 3 cut(s) 19, 1168, 1291
Bse118I RCCGGY 1 cut(s) 818
Bse1I ACTGG 2 cut(s) 177, 1684
Bse3DI GCAATG 2 cut(s) 755, 1356
BseBI CCWGG 2 cut(s) 1184, 1398
BseDI CCNNGG 2 cut(s) 1162, 1183
BseGI GGATG 4 cut(s) 123, 357, 1309, 1536
BseLI CCNNNNNNNGG 3 cut(s) 19, 1168, 1291
BseMI GCAATG 2 cut(s) 755, 1356
BseMII CTCAG 1 cut(s) 648
BseNI ACTGG 2 cut(s) 177, 1684
BseRI GAGGAG 4 cut(s) 219, 324, 854, 1287
BseSI GKGCMC 1 cut(s) 1610
BsgI GTGCAG 3 cut(s) 218, 284, 1640
Bsh1285I CGRYCG 1 cut(s) 1066
BshFI GGCC 4 cut(s) 242, 822, 859, 1442
BsiEI CGRYCG 1 cut(s) 1066
BsiHKAI GWGCWC 1 cut(s) 1193
BsiSI CCGG 2 cut(s) 545, 819
BslFI GGGAC 2 cut(s) 158, 580
BslI CCNNNNNNNGG 3 cut(s) 19, 1168, 1291
BsmAI GTCTC 4 cut(s) 57, 546, 1565, 1621
BsmBI CGTCTC 2 cut(s) 57, 1621
BsmFI GGGAC 2 cut(s) 158, 580
BsmI GAATGC 1 cut(s) 1425
BsnI GGCC 4 cut(s) 242, 822, 859, 1442
Bsp119I TTCGAA 1 cut(s) 1686
Bsp1286I GDGCHC 2 cut(s) 1193, 1610
Bsp143I GATC 8 cut(s) 4, 88, 439, 871, 1063, 1272, 1306, 1673
BspACI CCGC 9 cut(s) 23, 138, 243, 341, 394, 594, 856, 968, 1443
BspANI GGCC 4 cut(s) 242, 822, 859, 1442
BspCNI CTCAG 1 cut(s) 649
BspHI TCATGA 1 cut(s) 48
BspLI GGNNCC 5 cut(s) 6, 722, 1248, 1296, 1675
BspMAI CTGCAG 3 cut(s) 514, 913, 1293
BspPI GGATC 4 cut(s) 12, 434, 1668, 1681
BspT104I TTCGAA 1 cut(s) 1686
BsrDI GCAATG 2 cut(s) 755, 1356
BsrFI RCCGGY 1 cut(s) 818
BsrI ACTGG 2 cut(s) 177, 1684
BssAI RCCGGY 1 cut(s) 818
BssECI CCNNGG 2 cut(s) 1162, 1183
BssMI GATC 8 cut(s) 4, 88, 439, 871, 1063, 1272, 1306, 1673
BssNI GRCGYC 2 cut(s) 956, 1233
Bst2UI CCWGG 2 cut(s) 1184, 1398
Bst4CI ACNGT 6 cut(s) 401, 450, 696, 1366, 1528, 1693
BstACI GRCGYC 2 cut(s) 956, 1233
BstAPI GCANNNNNTGC 2 cut(s) 518, 815
BstBAI YACGTR 1 cut(s) 238
BstBI TTCGAA 1 cut(s) 1686
BstC8I GCNNGC 6 cut(s) 591, 820, 966, 1202, 1293, 1394
BstDEI CTNAG 5 cut(s) 657, 775, 960, 1015, 1318
BstDSI CCRYGG 1 cut(s) 1162
BstENI CCTNNNNNAGG 1 cut(s) 17
BstF5I GGATG 4 cut(s) 123, 357, 1309, 1536
BstH2I RGCGCY 1 cut(s) 299
BstHHI GCGC 1 cut(s) 298
BstKTI GATC 8 cut(s) 7, 91, 442, 874, 1066, 1275, 1309, 1676
BstMAI GTCTC 4 cut(s) 57, 546, 1565, 1621
BstMBI GATC 8 cut(s) 4, 88, 439, 871, 1063, 1272, 1306, 1673
BstMCI CGRYCG 1 cut(s) 1066
BstMWI GCNNNNNNNGC 5 cut(s) 518, 590, 815, 905, 1197
BstNI CCWGG 2 cut(s) 1184, 1398
BstNSI RCATGY 3 cut(s) 386, 908, 1120
BstSCI CCNGG 2 cut(s) 1182, 1396
BstSFI CTRYAG 3 cut(s) 510, 909, 1289
BstSLI GKGCMC 1 cut(s) 1610
BstV2I GAAGAC 1 cut(s) 959
BstX2I RGATCY 2 cut(s) 4, 1673
BstXI CCANNNNNNTGG 1 cut(s) 835
BstYI RGATCY 2 cut(s) 4, 1673
BsuI GTATCC 1 cut(s) 364
BsuRI GGCC 4 cut(s) 242, 822, 859, 1442
BtgI CCRYGG 1 cut(s) 1162
BtgZI GCGATG 1 cut(s) 118
BtsCI GGATG 4 cut(s) 123, 357, 1309, 1536
BtsI GCAGTG 1 cut(s) 1623
BtsIMutI CAGTG 2 cut(s) 1623, 1677
Cac8I GCNNGC 6 cut(s) 591, 820, 966, 1202, 1293, 1394
CciI TCATGA 1 cut(s) 48
CfoI GCGC 1 cut(s) 298
Cfr10I RCCGGY 1 cut(s) 818
Cfr13I GGNCC 1 cut(s) 858
CseI GACGC 3 cut(s) 37, 964, 1464
Csp6I GTAC 2 cut(s) 397, 943
CviAII CATG 7 cut(s) 49, 383, 803, 815, 905, 1078, 1117
CviQI GTAC 2 cut(s) 397, 943
DdeI CTNAG 5 cut(s) 657, 775, 960, 1015, 1318
DpnI GATC 8 cut(s) 6, 90, 441, 873, 1065, 1274, 1308, 1675
DpnII GATC 8 cut(s) 4, 88, 439, 871, 1063, 1272, 1306, 1673
DraI TTTAAA 1 cut(s) 1408
DrdI GACNNNNNNGTC 1 cut(s) 643
DseDI GACNNNNNNGTC 1 cut(s) 643
EaeI YGGCCR 2 cut(s) 240, 820
Eco47III AGCGCT 1 cut(s) 297
Eco57I CTGAAG 1 cut(s) 83
Eco72I CACGTG 1 cut(s) 238
EcoNI CCTNNNNNAGG 1 cut(s) 17
EcoRI GAATTC 2 cut(s) 143, 1097
EcoRII CCWGG 2 cut(s) 1182, 1396
Esp3I CGTCTC 2 cut(s) 57, 1621
FaeI CATG 7 cut(s) 52, 386, 806, 818, 908, 1081, 1120
FaqI GGGAC 2 cut(s) 158, 580
FatI CATG 7 cut(s) 48, 382, 802, 814, 904, 1077, 1116
FblI GTMKAC 1 cut(s) 1236
FokI GGATG 4 cut(s) 110, 364, 1316, 1523
FspBI CTAG 4 cut(s) 246, 498, 735, 1253
GlaI GCGC 1 cut(s) 297
GsuI CTGGAG 1 cut(s) 1419
HaeII RGCGCY 1 cut(s) 299
HaeIII GGCC 4 cut(s) 242, 822, 859, 1442
HapII CCGG 2 cut(s) 545, 819
HgaI GACGC 3 cut(s) 37, 964, 1464
HhaI GCGC 1 cut(s) 298
Hin1I GRCGYC 2 cut(s) 956, 1233
Hin1II CATG 7 cut(s) 52, 386, 806, 818, 908, 1081, 1120
Hin6I GCGC 1 cut(s) 296
HinP1I GCGC 1 cut(s) 296
HincII GTYRAC 1 cut(s) 1237
HindII GTYRAC 1 cut(s) 1237
HindIII AAGCTT 1 cut(s) 962
HinfI GANTC 4 cut(s) 57, 476, 539, 1511
HpaII CCGG 2 cut(s) 545, 819
HphI GGTGA 5 cut(s) 607, 1019, 1139, 1154, 1378
Hpy166II GTNNAC 3 cut(s) 1075, 1145, 1237
Hpy188I TCNGA 8 cut(s) 35, 62, 102, 167, 351, 1068, 1277, 1521
Hpy188III TCNNGA 7 cut(s) 49, 443, 656, 786, 1102, 1229, 1301
Hpy8I GTNNAC 3 cut(s) 1075, 1145, 1237
Hpy99I CGWCG 3 cut(s) 31, 74, 1238
HpyAV CCTTC 6 cut(s) 107, 137, 496, 1034, 1252, 1489
HpyCH4III ACNGT 6 cut(s) 401, 450, 696, 1366, 1528, 1693
HpyCH4IV ACGT 5 cut(s) 72, 237, 1233, 1370, 1630
HpyF10VI GCNNNNNNNGC 5 cut(s) 518, 590, 815, 905, 1197
HpyF3I CTNAG 5 cut(s) 657, 775, 960, 1015, 1318
HpySE526I ACGT 5 cut(s) 72, 237, 1233, 1370, 1630
Hsp92I GRCGYC 2 cut(s) 956, 1233
Hsp92II CATG 7 cut(s) 52, 386, 806, 818, 908, 1081, 1120
HspAI GCGC 1 cut(s) 296
KroI GCCGGC 1 cut(s) 818
KroNI GCCGGC 1 cut(s) 820
Kzo9I GATC 8 cut(s) 4, 88, 439, 871, 1063, 1272, 1306, 1673
LmnI GCTCC 4 cut(s) 311, 841, 920, 1300
LweI GCATC 4 cut(s) 667, 773, 1095, 1388
MaeI CTAG 4 cut(s) 246, 498, 735, 1253
MaeII ACGT 5 cut(s) 72, 237, 1233, 1370, 1630
MaeIII GTNAC 7 cut(s) 577, 598, 696, 1127, 1229, 1366, 1634
MalI GATC 8 cut(s) 6, 90, 441, 873, 1065, 1274, 1308, 1675
MboI GATC 8 cut(s) 4, 88, 439, 871, 1063, 1272, 1306, 1673
MboII GAAGA 3 cut(s) 66, 83, 964
MflI RGATCY 2 cut(s) 4, 1673
MhlI GDGCHC 2 cut(s) 1193, 1610
MluCI AATT 7 cut(s) 143, 358, 1097, 1155, 1491, 1642, 1652
MlyI GAGTC 1 cut(s) 548
MmeI TCCRAC 1 cut(s) 1237
MroNI GCCGGC 1 cut(s) 818
MroXI GAANNNNTTC 1 cut(s) 1155
MseI TTAA 5 cut(s) 428, 666, 930, 1089, 1407
MslI CAYNNNNRTG 3 cut(s) 1032, 1115, 1391
MspA1I CMGCKG 2 cut(s) 596, 1288
MspI CCGG 2 cut(s) 545, 819
MspR9I CCNGG 2 cut(s) 1184, 1398
Mva1269I GAATGC 1 cut(s) 1425
MvaI CCWGG 2 cut(s) 1184, 1398
MwoI GCNNNNNNNGC 5 cut(s) 518, 590, 815, 905, 1197
NaeI GCCGGC 1 cut(s) 820
NdeII GATC 8 cut(s) 4, 88, 439, 871, 1063, 1272, 1306, 1673
NgoMIV GCCGGC 1 cut(s) 818
NlaIII CATG 7 cut(s) 52, 386, 806, 818, 908, 1081, 1120
NlaIV GGNNCC 5 cut(s) 6, 722, 1248, 1296, 1675
NmeAIII GCCGAG 1 cut(s) 1650
NmuCI GTSAC 5 cut(s) 577, 1127, 1229, 1366, 1634
NspI RCATGY 3 cut(s) 386, 908, 1120
NspV TTCGAA 1 cut(s) 1686
OliI CACNNNNGTG 1 cut(s) 1391
PagI TCATGA 1 cut(s) 48
PciI ACATGT 1 cut(s) 1116
PctI GAATGC 1 cut(s) 1425
PdiI GCCGGC 1 cut(s) 820
PdmI GAANNNNTTC 1 cut(s) 1155
PfeI GAWTC 3 cut(s) 57, 476, 1511
PflFI GACNNNGTC 1 cut(s) 1632
Ple19I CGATCG 1 cut(s) 1066
PleI GAGTC 1 cut(s) 547
PmaCI CACGTG 1 cut(s) 238
PmlI CACGTG 1 cut(s) 238
PpsI GAGTC 1 cut(s) 547
Ppu21I YACGTR 1 cut(s) 238
PscI ACATGT 1 cut(s) 1116
PshBI ATTAAT 1 cut(s) 1089
PsiI TTATAA 1 cut(s) 977
Psp6I CCWGG 2 cut(s) 1182, 1396
PspCI CACGTG 1 cut(s) 238
PspGI CCWGG 2 cut(s) 1182, 1396
PspN4I GGNNCC 5 cut(s) 6, 722, 1248, 1296, 1675
PspPI GGNCC 1 cut(s) 858
PstI CTGCAG 3 cut(s) 514, 913, 1293
PsuI RGATCY 2 cut(s) 4, 1673
PsyI GACNNNGTC 1 cut(s) 1632
PvuI CGATCG 1 cut(s) 1066
PvuII CAGCTG 1 cut(s) 1288
RsaI GTAC 2 cut(s) 398, 944
RsaNI GTAC 2 cut(s) 397, 943
RseI CAYNNNNRTG 3 cut(s) 1032, 1115, 1391
SalI GTCGAC 1 cut(s) 1235
SaqAI TTAA 5 cut(s) 428, 666, 930, 1089, 1407
Sau3AI GATC 8 cut(s) 4, 88, 439, 871, 1063, 1272, 1306, 1673
Sau96I GGNCC 1 cut(s) 858
SchI GAGTC 1 cut(s) 548
ScrFI CCNGG 2 cut(s) 1184, 1398
SduI GDGCHC 2 cut(s) 1193, 1610
SfaNI GCATC 4 cut(s) 667, 773, 1095, 1388
SfcI CTRYAG 3 cut(s) 510, 909, 1289
SfuI TTCGAA 1 cut(s) 1686
SmiMI CAYNNNNRTG 3 cut(s) 1032, 1115, 1391
Sse9I AATT 7 cut(s) 143, 358, 1097, 1155, 1491, 1642, 1652
SsiI CCGC 9 cut(s) 23, 138, 243, 341, 394, 594, 856, 968, 1443
SspI AATATT 1 cut(s) 1135
SspMI CTAG 4 cut(s) 246, 498, 735, 1253
StyD4I CCNGG 2 cut(s) 1182, 1396
TaaI ACNGT 6 cut(s) 401, 450, 696, 1366, 1528, 1693
TaiI ACGT 5 cut(s) 75, 240, 1236, 1373, 1633
TaqI TCGA 7 cut(s) 270, 334, 562, 675, 1103, 1236, 1686
TasI AATT 7 cut(s) 143, 358, 1097, 1155, 1491, 1642, 1652
TatI WGTACW 1 cut(s) 942
TauI GCSGC 8 cut(s) 26, 140, 245, 343, 596, 859, 971, 1445
TfiI GAWTC 3 cut(s) 57, 476, 1511
Tru1I TTAA 5 cut(s) 428, 666, 930, 1089, 1407
Tru9I TTAA 5 cut(s) 428, 666, 930, 1089, 1407
TscAI CASTG 2 cut(s) 1623, 1684
TseFI GTSAC 5 cut(s) 577, 1127, 1229, 1366, 1634
Tsp45I GTSAC 5 cut(s) 577, 1127, 1229, 1366, 1634
TspDTI ATGAA 3 cut(s) 37, 276, 489
TspGWI ACGGA 1 cut(s) 1653
TspRI CASTG 2 cut(s) 1623, 1684
Tth111I GACNNNGTC 1 cut(s) 1632
VspI ATTAAT 1 cut(s) 1089
XagI CCTNNNNNAGG 1 cut(s) 17
XapI RAATTY 5 cut(s) 143, 358, 1097, 1642, 1652
XceI RCATGY 3 cut(s) 386, 908, 1120
XmiI GTMKAC 1 cut(s) 1236
XmnI GAANNNNTTC 1 cut(s) 1155
XspI CTAG 4 cut(s) 246, 498, 735, 1253
ZraI GACGTC 1 cut(s) 1234
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.