Rh5CG315200

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000157
Physical Location & Seq
Reverse (-)
34818680 .. 34886868
68189 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG315200.1

Sequence Viewer

Length: 1293 bp
ATGTGTATCCCACAAGAACAAAATGTATCACCTTCCCGGATTCAATTAACCACAGCTACCCGCGATTCAGCGACTGGGATAGACAACCAATCCGCAGACATTGCCATCGACATTTCAGCAGATCATTCGGCTCAACCTGCTAACAGACCTTCGTCTTATTTACTAGAACATCCAAACAGAGAAGAATCCCGTAAGACACGTGTTGCCCTCTATAAGTATGCACTAAAAGGCGATTGGGAAGCTGCTGAACTAATCTTGAAAGAGAATAGCGAACTTCTGCGAGCAAGCATATCTAGAGGATATGAAACAGTCCTTCACGTTGCAGCAGGAACAAACCATATTCACTTTGTGGAGAAACTGGTCGACATGATGAAAGTAGAAGACTTGGCACTGCAGGACGAAAATGAAAACACTGCCTTATGCATTGCCGCTGCGGCTGGATCTCTAGAAATTGTCCAGATTTTGATACAAAAGAACGAGTCTTTGCTAACAATTAGAGGCGGTAAAGATATGGCACCAGCCTACATGGCTGCTGTGTTAGGACAGTCCGAAGTGGCATGTTACCTGCACCGCGAAAGTAGTAAAGAGATGTTGAAGAAAACCGACCGAGAAAACTTGTTTTTTTCTTGCATCAATAATTGTCTGTACGATTTGGCCTTTCAATTGCTAGATGCTGATAAAGCATTAGCGAAGGCACGTACTAGTTCGCAGAAAAATAAAACGGCCTTGCATATCCTGGCTCGAAGACCTTCAGCATTTGGTGGCAGCCAAAGTCCACGGATGTGGACTAGACTCATTAACTCATTCCTCCCAGGTTTCAAGTTCGCATGCAAAAGAAAGTCGAGAGAAGCTAATGGTGCCCTTCAGCTAGTCGACTGCCTCTGGGAAGAAATCTTGAGAGATGAGCATGATGATGTTATGAGCCTGATCAAATATCCTTCAAATTTATTATTTGACGCAGTGGAATCAGGGAATTATGAGTTTCTGGCAATGCTTATGAGCTCTTATCCTGAGTTAGTATGGGAAACTGATGAAAAAAATCGAACCATAATCCATGTCGCAGTTCTGCATCGTCACGCAAGTATCTTCAATCTAGTACATGAAATAGGCTCAATTAAAGATGTCATCGTGACATATAAAGATGATGAGGGTAACAACATTGTGCATATGGCTGCAAAATTAGCACCTCAAAATCAATTGAATCTCGTGTCAGGCGTAGCTCTTCAAATGAATCGAGAGTTGGTATGGTTTGAGGTACTTCTCATGCTTAATGTTTTAATAATGATCATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

430

Amino Acids

48.26

Weight (kDa)

5.76

Isoelectric Point (pI)

46.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 74 - 159 1.1e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 105 - 190 2.2e-09 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 145, 573
AccB1I GGYRCC 2 cut(s) 514, 857
AccI GTMKAC 2 cut(s) 363, 873
AccII CGCG 2 cut(s) 63, 573
AciI CCGC 6 cut(s) 61, 93, 429, 434, 501, 571
AclWI GGATC 1 cut(s) 448
AcsI RAATTY 1 cut(s) 943
AcuI CTGAAG 2 cut(s) 735, 848
AcvI CACGTG 1 cut(s) 200
AdeI CACNNNGTG 1 cut(s) 349
AfaI GTAC 4 cut(s) 647, 700, 1098, 1257
AflIII ACRYGT 2 cut(s) 197, 199
AgsI TTSAA 9 cut(s) 44, 259, 595, 662, 820, 942, 1090, 1201, 1226
AhlI ACTAGT 1 cut(s) 701
AjnI CCWGG 2 cut(s) 735, 811
AjuI GAANNNNNNNTTGG 2 cut(s) 1223, 1255
AleI CACNNNNGTG 1 cut(s) 781
AluBI AGCT 6 cut(s) 56, 242, 851, 868, 1002, 1220
AluI AGCT 6 cut(s) 56, 242, 851, 868, 1002, 1220
Alw21I GWGCWC 1 cut(s) 1004
AlwI GGATC 1 cut(s) 448
AlwNI CAGNNNCTG 1 cut(s) 74
AoxI GGCC 2 cut(s) 654, 723
ApeKI GCWGC 6 cut(s) 242, 323, 431, 530, 765, 1172
ApoI RAATTY 1 cut(s) 943
Asp700I GAANNNNTTC 1 cut(s) 748
AsuC2I CCSGG 1 cut(s) 37
AsuHPI GGTGA 1 cut(s) 21
BaeGI GKGCMC 1 cut(s) 862
BaeI ACNNNNGTAYC 2 cut(s) 1066, 1099
BanI GGYRCC 2 cut(s) 514, 857
BanII GRGCYC 1 cut(s) 1004
BauI CACGAG 1 cut(s) 1205
BbrPI CACGTG 1 cut(s) 200
BbsI GAAGAC 2 cut(s) 387, 751
Bbv12I GWGCWC 1 cut(s) 1004
BbvI GCAGC 6 cut(s) 229, 335, 418, 517, 777, 1159
BccI CCATC 1 cut(s) 113
BceAI ACGGC 1 cut(s) 738
BcgI CGANNNNNNTGC 2 cut(s) 108, 142
BciT130I CCWGG 2 cut(s) 737, 813
BciVI GTATCC 1 cut(s) 17
BclI TGATCA 2 cut(s) 927, 1284
BcnI CCSGG 1 cut(s) 37
BcuI ACTAGT 1 cut(s) 701
BfaI CTAG 9 cut(s) 164, 294, 446, 668, 702, 789, 869, 1094, 1291
BfmI CTRYAG 1 cut(s) 392
BfuAI ACCTGC 2 cut(s) 145, 573
BfuI GTATCC 1 cut(s) 17
BglI GCCNNNNNGGC 2 cut(s) 434, 527
BisI GCNGC 8 cut(s) 243, 324, 429, 432, 435, 531, 766, 1173
BlsI GCNGC 8 cut(s) 244, 325, 430, 433, 436, 532, 767, 1174
Bme1390I CCNGG 3 cut(s) 37, 737, 813
BmiI GGNNCC 2 cut(s) 516, 859
BmrFI CCNGG 3 cut(s) 37, 737, 813
BmrI ACTGGG 1 cut(s) 84
BmsI GCATC 3 cut(s) 639, 661, 1078
BmuI ACTGGG 1 cut(s) 84
BoxI GACNNNNGTC 1 cut(s) 151
BpiI GAAGAC 2 cut(s) 387, 751
BpuEI CTTGAG 1 cut(s) 916
BpuMI CCSGG 1 cut(s) 37
BsaAI YACGTR 2 cut(s) 200, 698
BsaJI CCNNGG 2 cut(s) 776, 811
Bse1I ACTGG 2 cut(s) 79, 363
Bse3DI GCAATG 3 cut(s) 99, 423, 996
BseBI CCWGG 2 cut(s) 737, 813
BseDI CCNNGG 2 cut(s) 776, 811
BseGI GGATG 2 cut(s) 169, 786
BseMI GCAATG 3 cut(s) 99, 423, 996
BseMII CTCAG 1 cut(s) 1002
BseNI ACTGG 2 cut(s) 79, 363
BseSI GKGCMC 1 cut(s) 862
BseXI GCAGC 6 cut(s) 229, 335, 418, 517, 777, 1159
BsgI GTGCAG 1 cut(s) 551
Bsh1236I CGCG 2 cut(s) 63, 573
Bsh1285I CGRYCG 1 cut(s) 607
BshFI GGCC 2 cut(s) 656, 725
BshNI GGYRCC 2 cut(s) 514, 857
BsiEI CGRYCG 1 cut(s) 607
BsiHKAI GWGCWC 1 cut(s) 1004
BsiSI CCGG 1 cut(s) 37
BsnI GGCC 2 cut(s) 656, 725
Bsp1286I GDGCHC 2 cut(s) 862, 1004
Bsp143I GATC 4 cut(s) 121, 440, 927, 1284
BspACI CCGC 6 cut(s) 61, 93, 429, 434, 501, 571
BspANI GGCC 2 cut(s) 656, 725
BspCNI CTCAG 1 cut(s) 1003
BspFNI CGCG 2 cut(s) 63, 573
BspLI GGNNCC 2 cut(s) 516, 859
BspMAI CTGCAG 1 cut(s) 396
BspMI ACCTGC 2 cut(s) 145, 573
BspPI GGATC 1 cut(s) 448
BspQI GCTCTTC 1 cut(s) 1227
BspT107I GGYRCC 2 cut(s) 514, 857
BsrDI GCAATG 3 cut(s) 99, 423, 996
BsrI ACTGG 2 cut(s) 79, 363
BssECI CCNNGG 2 cut(s) 776, 811
BssMI GATC 4 cut(s) 121, 440, 927, 1284
BssSI CACGAG 1 cut(s) 1205
Bst2BI CACGAG 1 cut(s) 1205
Bst2UI CCWGG 2 cut(s) 737, 813
Bst4CI ACNGT 2 cut(s) 310, 546
Bst6I CTCTTC 1 cut(s) 1227
BstAPI GCANNNNNTGC 1 cut(s) 101
BstBAI YACGTR 2 cut(s) 200, 698
BstC8I GCNNGC 3 cut(s) 282, 286, 829
BstDEI CTNAG 1 cut(s) 1011
BstDSI CCRYGG 1 cut(s) 776
BstF5I GGATG 2 cut(s) 169, 786
BstFNI CGCG 2 cut(s) 63, 573
BstKTI GATC 4 cut(s) 124, 443, 930, 1287
BstMBI GATC 4 cut(s) 121, 440, 927, 1284
BstMCI CGRYCG 1 cut(s) 607
BstMWI GCNNNNNNNGC 7 cut(s) 101, 137, 434, 527, 680, 857, 1181
BstNI CCWGG 2 cut(s) 737, 813
BstNSI RCATGY 2 cut(s) 561, 831
BstPAI GACNNNNGTC 1 cut(s) 151
BstSCI CCNGG 3 cut(s) 35, 735, 811
BstSFI CTRYAG 1 cut(s) 392
BstSLI GKGCMC 1 cut(s) 862
BstUI CGCG 2 cut(s) 63, 573
BstV1I GCAGC 6 cut(s) 229, 335, 418, 517, 777, 1159
BstV2I GAAGAC 2 cut(s) 387, 751
BstX2I RGATCY 1 cut(s) 440
BstXI CCANNNNNNTGG 1 cut(s) 783
BstYI RGATCY 1 cut(s) 440
BsuI GTATCC 1 cut(s) 17
BsuRI GGCC 2 cut(s) 656, 725
BtgI CCRYGG 1 cut(s) 776
BtsCI GGATG 2 cut(s) 169, 786
BtsI GCAGTG 3 cut(s) 389, 411, 966
BtsIMutI CAGTG 3 cut(s) 389, 411, 966
BveI ACCTGC 2 cut(s) 145, 573
Cac8I GCNNGC 3 cut(s) 282, 286, 829
CaiI CAGNNNCTG 1 cut(s) 74
CseI GACGC 1 cut(s) 965
Csp6I GTAC 4 cut(s) 646, 699, 1097, 1256
CviAII CATG 8 cut(s) 367, 526, 558, 828, 908, 1055, 1100, 1264
CviQI GTAC 4 cut(s) 646, 699, 1097, 1256
DdeI CTNAG 1 cut(s) 1011
DpnI GATC 4 cut(s) 123, 442, 929, 1286
DpnII GATC 4 cut(s) 121, 440, 927, 1284
DraIII CACNNNGTG 1 cut(s) 349
Eam1104I CTCTTC 1 cut(s) 1227
EarI CTCTTC 1 cut(s) 1227
Ecl136II GAGCTC 1 cut(s) 1002
Eco24I GRGCYC 1 cut(s) 1004
Eco53kI GAGCTC 1 cut(s) 1002
Eco57I CTGAAG 2 cut(s) 735, 848
Eco72I CACGTG 1 cut(s) 200
EcoICRI GAGCTC 1 cut(s) 1002
EcoRII CCWGG 2 cut(s) 735, 811
EcoT22I ATGCAT 1 cut(s) 425
EcoT38I GRGCYC 1 cut(s) 1004
FaeI CATG 8 cut(s) 370, 529, 561, 831, 911, 1058, 1103, 1267
FatI CATG 8 cut(s) 366, 525, 557, 827, 907, 1054, 1099, 1263
FauI CCCGC 1 cut(s) 68
FauNDI CATATG 1 cut(s) 1167
FbaI TGATCA 2 cut(s) 927, 1284
FblI GTMKAC 2 cut(s) 363, 873
Fnu4HI GCNGC 8 cut(s) 243, 324, 429, 432, 435, 531, 766, 1173
FokI GGATG 2 cut(s) 156, 793
FriOI GRGCYC 1 cut(s) 1004
Fsp4HI GCNGC 8 cut(s) 243, 324, 429, 432, 435, 531, 766, 1173
FspBI CTAG 9 cut(s) 164, 294, 446, 668, 702, 789, 869, 1094, 1291
GluI GCNGC 8 cut(s) 243, 324, 429, 432, 435, 531, 766, 1173
HaeIII GGCC 2 cut(s) 656, 725
HapII CCGG 1 cut(s) 37
HgaI GACGC 1 cut(s) 965
Hin1II CATG 8 cut(s) 370, 529, 561, 831, 911, 1058, 1103, 1267
HincII GTYRAC 2 cut(s) 364, 874
HindII GTYRAC 2 cut(s) 364, 874
HinfI GANTC 8 cut(s) 40, 65, 185, 479, 792, 965, 1201, 1231
HpaII CCGG 1 cut(s) 37
HphI GGTGA 1 cut(s) 21
Hpy166II GTNNAC 4 cut(s) 364, 776, 786, 874
Hpy188I TCNGA 1 cut(s) 550
Hpy188III TCNNGA 9 cut(s) 256, 294, 446, 457, 843, 895, 1010, 1129, 1235
Hpy8I GTNNAC 4 cut(s) 364, 776, 786, 874
HpyAV CCTTC 7 cut(s) 42, 159, 323, 685, 759, 872, 948
HpyCH4III ACNGT 2 cut(s) 310, 546
HpyCH4IV ACGT 3 cut(s) 199, 318, 697
HpyF10VI GCNNNNNNNGC 7 cut(s) 101, 137, 434, 527, 680, 857, 1181
HpyF3I CTNAG 1 cut(s) 1011
HpySE526I ACGT 3 cut(s) 199, 318, 697
Hsp92II CATG 8 cut(s) 370, 529, 561, 831, 911, 1058, 1103, 1267
Ksp22I TGATCA 2 cut(s) 927, 1284
Kzo9I GATC 4 cut(s) 121, 440, 927, 1284
LguI GCTCTTC 1 cut(s) 1227
Lsp1109I GCAGC 6 cut(s) 229, 335, 418, 517, 777, 1159
LweI GCATC 3 cut(s) 639, 661, 1078
MaeI CTAG 9 cut(s) 164, 294, 446, 668, 702, 789, 869, 1094, 1291
MaeII ACGT 3 cut(s) 199, 318, 697
MaeIII GTNAC 4 cut(s) 560, 1073, 1129, 1151
MalI GATC 4 cut(s) 123, 442, 929, 1286
MboI GATC 4 cut(s) 121, 440, 927, 1284
MboII GAAGA 7 cut(s) 194, 392, 607, 756, 899, 1078, 1214
MfeI CAATTG 2 cut(s) 662, 1196
MflI RGATCY 1 cut(s) 440
MhlI GDGCHC 2 cut(s) 862, 1004
MlyI GAGTC 2 cut(s) 488, 786
MnlI CCTC 8 cut(s) 218, 290, 491, 818, 890, 1141, 1197, 1246
Mph1103I ATGCAT 1 cut(s) 425
MroXI GAANNNNTTC 1 cut(s) 748
MseI TTAA 5 cut(s) 47, 798, 1116, 1269, 1277
MslI CAYNNNNRTG 2 cut(s) 781, 912
MspA1I CMGCKG 1 cut(s) 431
MspI CCGG 1 cut(s) 37
MspR9I CCNGG 3 cut(s) 37, 737, 813
MunI CAATTG 2 cut(s) 662, 1196
MvaI CCWGG 2 cut(s) 737, 813
MvnI CGCG 2 cut(s) 63, 573
MwoI GCNNNNNNNGC 7 cut(s) 101, 137, 434, 527, 680, 857, 1181
NciI CCSGG 1 cut(s) 37
NdeI CATATG 1 cut(s) 1167
NdeII GATC 4 cut(s) 121, 440, 927, 1284
NlaIII CATG 8 cut(s) 370, 529, 561, 831, 911, 1058, 1103, 1267
NlaIV GGNNCC 2 cut(s) 516, 859
NmuCI GTSAC 2 cut(s) 1073, 1129
NsiI ATGCAT 1 cut(s) 425
NspI RCATGY 2 cut(s) 561, 831
OliI CACNNNNGTG 1 cut(s) 781
PaeI GCATGC 1 cut(s) 831
PciSI GCTCTTC 1 cut(s) 1227
PcsI WCGNNNNNNNCGW 1 cut(s) 1212
PdmI GAANNNNTTC 1 cut(s) 748
PfeI GAWTC 6 cut(s) 40, 65, 185, 965, 1201, 1231
PfoI TCCNGGA 1 cut(s) 35
PkrI GCNGC 8 cut(s) 244, 325, 430, 433, 436, 532, 767, 1174
PleI GAGTC 2 cut(s) 487, 786
PmaCI CACGTG 1 cut(s) 200
PmlI CACGTG 1 cut(s) 200
PpsI GAGTC 2 cut(s) 487, 786
Ppu21I YACGTR 2 cut(s) 200, 698
PshAI GACNNNNGTC 1 cut(s) 151
Psp124BI GAGCTC 1 cut(s) 1004
Psp6I CCWGG 2 cut(s) 735, 811
PspCI CACGTG 1 cut(s) 200
PspGI CCWGG 2 cut(s) 735, 811
PspN4I GGNNCC 2 cut(s) 516, 859
PstI CTGCAG 1 cut(s) 396
PstNI CAGNNNCTG 1 cut(s) 74
PsuI RGATCY 1 cut(s) 440
RsaI GTAC 4 cut(s) 647, 700, 1098, 1257
RsaNI GTAC 4 cut(s) 646, 699, 1097, 1256
RseI CAYNNNNRTG 2 cut(s) 781, 912
SacI GAGCTC 1 cut(s) 1004
SalI GTCGAC 2 cut(s) 362, 872
SapI GCTCTTC 1 cut(s) 1227
SaqAI TTAA 5 cut(s) 47, 798, 1116, 1269, 1277
SatI GCNGC 8 cut(s) 243, 324, 429, 432, 435, 531, 766, 1173
Sau3AI GATC 4 cut(s) 121, 440, 927, 1284
SchI GAGTC 2 cut(s) 488, 786
ScrFI CCNGG 3 cut(s) 37, 737, 813
SduI GDGCHC 2 cut(s) 862, 1004
SfaNI GCATC 3 cut(s) 639, 661, 1078
SfcI CTRYAG 1 cut(s) 392
SmiMI CAYNNNNRTG 2 cut(s) 781, 912
SmlI CTYRAG 1 cut(s) 895
SmoI CTYRAG 1 cut(s) 895
SpeI ACTAGT 1 cut(s) 701
SphI GCATGC 1 cut(s) 831
SsiI CCGC 6 cut(s) 61, 93, 429, 434, 501, 571
SspMI CTAG 9 cut(s) 164, 294, 446, 668, 702, 789, 869, 1094, 1291
SstI GAGCTC 1 cut(s) 1004
StyD4I CCNGG 3 cut(s) 35, 735, 811
TaaI ACNGT 2 cut(s) 310, 546
TaiI ACGT 3 cut(s) 202, 321, 700
TaqI TCGA 7 cut(s) 108, 363, 742, 842, 873, 1042, 1234
TaqII GACCGA 1 cut(s) 621
TatI WGTACW 1 cut(s) 1096
TauI GCSGC 2 cut(s) 431, 437
TfiI GAWTC 6 cut(s) 40, 65, 185, 965, 1201, 1231
Tru1I TTAA 5 cut(s) 47, 798, 1116, 1269, 1277
Tru9I TTAA 5 cut(s) 47, 798, 1116, 1269, 1277
TscAI CASTG 3 cut(s) 396, 418, 966
TseFI GTSAC 2 cut(s) 1073, 1129
TseI GCWGC 6 cut(s) 242, 323, 431, 530, 765, 1172
Tsp45I GTSAC 2 cut(s) 1073, 1129
TspDTI ATGAA 6 cut(s) 318, 386, 420, 1047, 1116, 1244
TspGWI ACGGA 1 cut(s) 793
TspRI CASTG 3 cut(s) 396, 418, 966
XapI RAATTY 1 cut(s) 943
XbaI TCTAGA 2 cut(s) 293, 445
XceI RCATGY 2 cut(s) 561, 831
XmiI GTMKAC 2 cut(s) 363, 873
XmnI GAANNNNTTC 1 cut(s) 748
XspI CTAG 9 cut(s) 164, 294, 446, 668, 702, 789, 869, 1094, 1291
Zsp2I ATGCAT 1 cut(s) 425
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.