Rw5G026170

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000157
Physical Location & Seq
Reverse (-)
37690059 .. 37693061
3003 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G026170.1

Sequence Viewer

Length: 1788 bp
ATGTCTATCTCACAAAAACAACATGCATCACCTTCCCGGATTCAATTAACCACAACTAGCCGCAATTCAGCGATTGGGACAAACAACCAATCCGCAGACATCGCCATCGACATTTCCGCAGATCATTCAGCTCAACCTAACAGACCTTCGTCTTATTTACTGGAACACAAAAACAGAGAAGAATACCTTAAGACATGTGTTGCCCTCTATAAGTATGCACTAAAAGGCGATTGGGAATCCGCTGAACTAATCTTGAAAGAGAATAGCAAACTTCTGCGAGCAAGCATATCTAGAGGATATGAAACAGTCCTTCACGTTGCAGCAGGAACAAGCCATATTCACTTTGTGGAGAAACTGGTCGGCATGATGAAAGTAGAAGACTTGACACTGCAGGACGAAAATGGAAACACTGCCTTATGCATTGCCGCTGCGGCTGGATCTCTAGAAATTGTCCAGATTTTGATACAAAAGAACAAGTCTTTGCTAACAATTAGAGGCGGTAAAGATATGGCACCAGCCTACATGGCTGCTGTGTTAGGACAGTCCGAAATGGCATGGTACCTGTACCGCGAAAGTAAAAAGATGTTGGAGGAAATCGACAAAGAAAACTTGTTTTTTTCTTGCATCAACAATTGTTTGTACGATTTGGCCTTTCAGTTGCTAGATGCTAATAAAGCATTAGCTAAGGCACGTACAAGTTCACAGAGAAATAAAACGGCCTTGCATATCCTGGCTCGAAGACCTTCAGCATTTGGTGGTAGCCAAAGTCCACGAATGTGGACTAGACTCATTAACTCTTTCCTCCCAGGTTTGAAGTTTGCATACAAAAGAAAGTTAAGAGGAGCTAATGGAGCCCTTCAACTAGTCCACCGCCTCTGGGAAGAAGTCTTGAAAAATAATGAGCATGATGATGTGATGAGGCTGATCAATTATCCTTCAAATTTATTATTTGACGCAGCAGAATTAGGGAATTATGAGTTCCTAGCAGCGCTTTTGAGCTCTTATCCTGAGTTAGTATGGGAAACTGATGAAAAAAATCGAACTATAATTCATGTCGCAGTTCTGCATCGTCACGCAAGTATCTTCAATCTAGTGCATGAAATCGGCTCAATCAAAGATGTCATCGTGACATACAAAGATGTTCAGGGTAACAACATTGTGCATATGGCTGCAAAATTAGCACCTCAAAATCAATTGAATCTCGTGTCAGGCGTAGCTCTTCAAATGCATCGAGAGTTGGTATGGTTTGAGGAAGTGAAAAAGATCGTCCAACCTCAATACATCGAGATGGAAAACAACAAAGGAAAAACACCTCAAGAATTATTTACTAAAGAGCATACGGCGTTAATGCATCGAGGAGAAAAATGGATGAAGGACACTGCAACTTCATGCATGCTCGTTGCGACTATTATCGCAACCGTTGTGTTCTCAGCTACATTTAGCATACCTGGCGGCACTGATGATCATACTGGAAAGCCAAATCTTTTGAAACAGAAAGCCTTCCTAGACTTTTCCATAGCAGACGAAGTAGCACTCTTTTCCTCTTCAACTGCAATGTTGATGTTCTTGTTCATCCTTACCTCGCGGTATGCAGAAAATGATTTCCACAAGTCCTTACCCTTGAAGTTGATGGTAGGGCTCACTTGCCTCTTCATATCTATAGCATCGATGATGATGGCTTTCATTGCCTTGTTTGCATTTTTGCAATTCCCTCTCGTGTCCGACATGTCCTCGTCTATATTTTGCTCAAGTCTACTATTTCAACCGTGGAAACACATGCTCTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

595

Amino Acids

66.93

Weight (kDa)

8.45

Isoelectric Point (pI)

43.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 74 - 158 3e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 104 - 191 2.8e-10 Ankyrin repeats (3 copies)
PGG PF13962 454 - 565 7.8e-27 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 558
AccB1I GGYRCC 2 cut(s) 511, 558
AccI GTMKAC 1 cut(s) 1753
AccII CGCG 2 cut(s) 570, 1585
AclWI GGATC 1 cut(s) 445
AcsI RAATTY 1 cut(s) 940
AcuI CTGAAG 1 cut(s) 729
AdeI CACNNNGTG 1 cut(s) 346
AfaI GTAC 4 cut(s) 560, 566, 641, 694
AfeI AGCGCT 1 cut(s) 990
AfiI CCNNNNNNNGG 1 cut(s) 877
AflII CTTAAG 1 cut(s) 188
AflIII ACRYGT 2 cut(s) 194, 1725
AhlI ACTAGT 1 cut(s) 862
AjnI CCWGG 3 cut(s) 729, 805, 1447
AleI CACNNNNGTG 1 cut(s) 775
AluBI AGCT 6 cut(s) 131, 683, 845, 999, 1217, 1433
AluI AGCT 6 cut(s) 131, 683, 845, 999, 1217, 1433
Alw21I GWGCWC 1 cut(s) 1001
AlwI GGATC 1 cut(s) 445
Aor51HI AGCGCT 1 cut(s) 990
AoxI GGCC 2 cut(s) 648, 717
ApeKI GCWGC 6 cut(s) 320, 428, 527, 956, 986, 1169
ApoI RAATTY 1 cut(s) 940
Asp700I GAANNNNTTC 2 cut(s) 742, 1499
Asp718I GGTACC 1 cut(s) 558
AspLEI GCGC 1 cut(s) 991
AsuC2I CCSGG 1 cut(s) 37
AsuHPI GGTGA 1 cut(s) 21
BaeI ACNNNNGTAYC 2 cut(s) 1063, 1096
BanI GGYRCC 2 cut(s) 511, 558
BanII GRGCYC 3 cut(s) 856, 1001, 1641
BarI GAAGNNNNNNTAC 2 cut(s) 806, 838
BauI CACGAG 2 cut(s) 1202, 1715
BbsI GAAGAC 2 cut(s) 384, 745
Bbv12I GWGCWC 1 cut(s) 1001
BbvI GCAGC 6 cut(s) 332, 415, 514, 968, 998, 1156
BccI CCATC 4 cut(s) 113, 1282, 1624, 1669
BceAI ACGGC 2 cut(s) 732, 1356
BciT130I CCWGG 3 cut(s) 731, 807, 1449
BclI TGATCA 2 cut(s) 924, 1462
BcnI CCSGG 1 cut(s) 37
BcuI ACTAGT 1 cut(s) 862
BfaI CTAG 9 cut(s) 57, 291, 443, 662, 783, 863, 983, 1091, 1505
BfmI CTRYAG 2 cut(s) 389, 1659
BfoI RGCGCY 1 cut(s) 992
BfrI CTTAAG 1 cut(s) 188
BglI GCCNNNNNGGC 2 cut(s) 431, 524
Bme1390I CCNGG 4 cut(s) 37, 731, 807, 1449
BmiI GGNNCC 3 cut(s) 513, 560, 853
BmrFI CCNGG 4 cut(s) 37, 731, 807, 1449
BmsI GCATC 7 cut(s) 35, 633, 655, 1075, 1237, 1360, 1673
BoxI GACNNNNGTC 1 cut(s) 148
BpiI GAAGAC 2 cut(s) 384, 745
Bpu10I CCTNAGC 1 cut(s) 684
BpuEI CTTGAG 2 cut(s) 1299, 1732
BpuMI CCSGG 1 cut(s) 37
Bsa29I ATCGAT 1 cut(s) 1667
BsaAI YACGTR 1 cut(s) 692
BsaJI CCNNGG 2 cut(s) 805, 1766
Bsc4I CCNNNNNNNGG 1 cut(s) 877
Bse1I ACTGG 3 cut(s) 165, 360, 1474
Bse3DI GCAATG 3 cut(s) 420, 1560, 1683
BseBI CCWGG 3 cut(s) 731, 807, 1449
BseCI ATCGAT 1 cut(s) 1667
BseDI CCNNGG 2 cut(s) 805, 1766
BseGI GGATG 2 cut(s) 1374, 1572
BseLI CCNNNNNNNGG 1 cut(s) 877
BseMI GCAATG 3 cut(s) 420, 1560, 1683
BseMII CTCAG 2 cut(s) 999, 1443
BseNI ACTGG 3 cut(s) 165, 360, 1474
BseRI GAGGAG 2 cut(s) 855, 1371
BseXI GCAGC 6 cut(s) 332, 415, 514, 968, 998, 1156
Bsh1236I CGCG 2 cut(s) 570, 1585
BshFI GGCC 2 cut(s) 650, 719
BshNI GGYRCC 2 cut(s) 511, 558
BshVI ATCGAT 1 cut(s) 1667
BsiHKAI GWGCWC 1 cut(s) 1001
BsiSI CCGG 1 cut(s) 37
BslFI GGGAC 1 cut(s) 91
BslI CCNNNNNNNGG 1 cut(s) 877
BsmFI GGGAC 1 cut(s) 91
BsnI GGCC 2 cut(s) 650, 719
Bsp1286I GDGCHC 3 cut(s) 856, 1001, 1641
Bsp143I GATC 5 cut(s) 121, 437, 924, 1263, 1462
BspANI GGCC 2 cut(s) 650, 719
BspCNI CTCAG 2 cut(s) 1000, 1442
BspDI ATCGAT 1 cut(s) 1667
BspFNI CGCG 2 cut(s) 570, 1585
BspLI GGNNCC 3 cut(s) 513, 560, 853
BspMAI CTGCAG 1 cut(s) 393
BspPI GGATC 1 cut(s) 445
BspQI GCTCTTC 1 cut(s) 1224
BspT107I GGYRCC 2 cut(s) 511, 558
BspTI CTTAAG 1 cut(s) 188
BsrDI GCAATG 3 cut(s) 420, 1560, 1683
BsrI ACTGG 3 cut(s) 165, 360, 1474
BssECI CCNNGG 2 cut(s) 805, 1766
BssMI GATC 5 cut(s) 121, 437, 924, 1263, 1462
BssSI CACGAG 2 cut(s) 1202, 1715
Bst2BI CACGAG 2 cut(s) 1202, 1715
Bst2UI CCWGG 3 cut(s) 731, 807, 1449
Bst4CI ACNGT 4 cut(s) 307, 543, 1420, 1767
Bst6I CTCTTC 3 cut(s) 1224, 1549, 1655
BstAFI CTTAAG 1 cut(s) 188
BstBAI YACGTR 1 cut(s) 692
BstC8I GCNNGC 3 cut(s) 279, 283, 1394
BstDEI CTNAG 3 cut(s) 684, 1008, 1429
BstDSI CCRYGG 1 cut(s) 1766
BstF5I GGATG 2 cut(s) 1374, 1572
BstFNI CGCG 2 cut(s) 570, 1585
BstH2I RGCGCY 1 cut(s) 992
BstHHI GCGC 1 cut(s) 991
BstKTI GATC 5 cut(s) 124, 440, 927, 1266, 1465
BstMBI GATC 5 cut(s) 121, 437, 924, 1263, 1462
BstMWI GCNNNNNNNGC 9 cut(s) 101, 431, 524, 674, 851, 1178, 1449, 1685, 1694
BstNI CCWGG 3 cut(s) 731, 807, 1449
BstNSI RCATGY 5 cut(s) 26, 198, 1396, 1729, 1780
BstPAI GACNNNNGTC 1 cut(s) 148
BstSCI CCNGG 4 cut(s) 35, 729, 805, 1447
BstSFI CTRYAG 2 cut(s) 389, 1659
BstUI CGCG 2 cut(s) 570, 1585
BstV1I GCAGC 6 cut(s) 332, 415, 514, 968, 998, 1156
BstV2I GAAGAC 2 cut(s) 384, 745
BstX2I RGATCY 1 cut(s) 437
BstXI CCANNNNNNTGG 1 cut(s) 777
BstYI RGATCY 1 cut(s) 437
Bsu15I ATCGAT 1 cut(s) 1667
BsuRI GGCC 2 cut(s) 650, 719
BsuTUI ATCGAT 1 cut(s) 1667
BtgI CCRYGG 1 cut(s) 1766
BtgZI GCGATG 1 cut(s) 85
BtsCI GGATG 2 cut(s) 1374, 1572
BtsI GCAGTG 3 cut(s) 386, 408, 1377
BtsIMutI CAGTG 4 cut(s) 386, 408, 1377, 1455
Cac8I GCNNGC 3 cut(s) 279, 283, 1394
CfoI GCGC 1 cut(s) 991
ClaI ATCGAT 1 cut(s) 1667
CseI GACGC 1 cut(s) 962
Csp6I GTAC 4 cut(s) 559, 565, 640, 693
CviQI GTAC 4 cut(s) 559, 565, 640, 693
DdeI CTNAG 3 cut(s) 684, 1008, 1429
DpnI GATC 5 cut(s) 123, 439, 926, 1265, 1464
DpnII GATC 5 cut(s) 121, 437, 924, 1263, 1462
DraIII CACNNNGTG 1 cut(s) 346
Eam1104I CTCTTC 3 cut(s) 1224, 1549, 1655
EarI CTCTTC 3 cut(s) 1224, 1549, 1655
Ecl136II GAGCTC 1 cut(s) 999
Eco24I GRGCYC 3 cut(s) 856, 1001, 1641
Eco47III AGCGCT 1 cut(s) 990
Eco53kI GAGCTC 1 cut(s) 999
Eco57I CTGAAG 1 cut(s) 729
EcoICRI GAGCTC 1 cut(s) 999
EcoRII CCWGG 3 cut(s) 729, 805, 1447
EcoT22I ATGCAT 5 cut(s) 28, 422, 1230, 1353, 1394
EcoT38I GRGCYC 3 cut(s) 856, 1001, 1641
FalI AAGNNNNNCTT 2 cut(s) 171, 203
FaqI GGGAC 1 cut(s) 91
FauNDI CATATG 1 cut(s) 1164
FbaI TGATCA 2 cut(s) 924, 1462
FblI GTMKAC 1 cut(s) 1753
FokI GGATG 2 cut(s) 1381, 1559
FriOI GRGCYC 3 cut(s) 856, 1001, 1641
FspBI CTAG 9 cut(s) 57, 291, 443, 662, 783, 863, 983, 1091, 1505
GlaI GCGC 1 cut(s) 990
HaeII RGCGCY 1 cut(s) 992
HaeIII GGCC 2 cut(s) 650, 719
HapII CCGG 1 cut(s) 37
HgaI GACGC 1 cut(s) 962
HhaI GCGC 1 cut(s) 991
Hin6I GCGC 1 cut(s) 989
HinP1I GCGC 1 cut(s) 989
HinfI GANTC 4 cut(s) 40, 236, 786, 1198
HpaII CCGG 1 cut(s) 37
HphI GGTGA 1 cut(s) 21
Hpy166II GTNNAC 5 cut(s) 701, 770, 780, 868, 1754
Hpy188I TCNGA 2 cut(s) 547, 1723
Hpy8I GTNNAC 5 cut(s) 701, 770, 780, 868, 1754
HpyAV CCTTC 8 cut(s) 42, 156, 320, 753, 866, 945, 1366, 1510
HpyCH4III ACNGT 4 cut(s) 307, 543, 1420, 1767
HpyCH4IV ACGT 2 cut(s) 315, 691
HpyF10VI GCNNNNNNNGC 9 cut(s) 101, 431, 524, 674, 851, 1178, 1449, 1685, 1694
HpyF3I CTNAG 3 cut(s) 684, 1008, 1429
HpySE526I ACGT 2 cut(s) 315, 691
HspAI GCGC 1 cut(s) 989
KpnI GGTACC 1 cut(s) 562
Ksp22I TGATCA 2 cut(s) 924, 1462
Kzo9I GATC 5 cut(s) 121, 437, 924, 1263, 1462
LguI GCTCTTC 1 cut(s) 1224
LmnI GCTCC 2 cut(s) 842, 851
Lsp1109I GCAGC 6 cut(s) 332, 415, 514, 968, 998, 1156
LweI GCATC 7 cut(s) 35, 633, 655, 1075, 1237, 1360, 1673
MaeI CTAG 9 cut(s) 57, 291, 443, 662, 783, 863, 983, 1091, 1505
MaeII ACGT 2 cut(s) 315, 691
MaeIII GTNAC 3 cut(s) 1070, 1126, 1148
MalI GATC 5 cut(s) 123, 439, 926, 1265, 1464
MboI GATC 5 cut(s) 121, 437, 924, 1263, 1462
MboII GAAGA 8 cut(s) 191, 389, 750, 893, 1075, 1211, 1536, 1642
MfeI CAATTG 2 cut(s) 631, 1193
MflI RGATCY 1 cut(s) 437
MhlI GDGCHC 3 cut(s) 856, 1001, 1641
MlyI GAGTC 1 cut(s) 780
MmeI TCCRAC 3 cut(s) 567, 1294, 1746
Mph1103I ATGCAT 5 cut(s) 28, 422, 1230, 1353, 1394
MroXI GAANNNNTTC 2 cut(s) 742, 1499
MseI TTAA 5 cut(s) 47, 189, 792, 836, 1346
MslI CAYNNNNRTG 3 cut(s) 775, 909, 1286
MspA1I CMGCKG 2 cut(s) 242, 428
MspCI CTTAAG 1 cut(s) 188
MspI CCGG 1 cut(s) 37
MspR9I CCNGG 4 cut(s) 37, 731, 807, 1449
MunI CAATTG 2 cut(s) 631, 1193
MvaI CCWGG 3 cut(s) 731, 807, 1449
MvnI CGCG 2 cut(s) 570, 1585
MwoI GCNNNNNNNGC 9 cut(s) 101, 431, 524, 674, 851, 1178, 1449, 1685, 1694
NciI CCSGG 1 cut(s) 37
NdeI CATATG 1 cut(s) 1164
NdeII GATC 5 cut(s) 121, 437, 924, 1263, 1462
NlaIV GGNNCC 3 cut(s) 513, 560, 853
NmuCI GTSAC 2 cut(s) 1070, 1126
NsiI ATGCAT 5 cut(s) 28, 422, 1230, 1353, 1394
NspI RCATGY 5 cut(s) 26, 198, 1396, 1729, 1780
OliI CACNNNNGTG 1 cut(s) 775
PaeI GCATGC 1 cut(s) 1396
PciI ACATGT 2 cut(s) 194, 1725
PciSI GCTCTTC 1 cut(s) 1224
PcsI WCGNNNNNNNCGW 1 cut(s) 1209
PdmI GAANNNNTTC 2 cut(s) 742, 1499
PfeI GAWTC 3 cut(s) 40, 236, 1198
PfoI TCCNGGA 1 cut(s) 35
PleI GAGTC 1 cut(s) 780
PpsI GAGTC 1 cut(s) 780
Ppu21I YACGTR 1 cut(s) 692
PscI ACATGT 2 cut(s) 194, 1725
PshAI GACNNNNGTC 1 cut(s) 148
Psp124BI GAGCTC 1 cut(s) 1001
Psp6I CCWGG 3 cut(s) 729, 805, 1447
PspGI CCWGG 3 cut(s) 729, 805, 1447
PspN4I GGNNCC 3 cut(s) 513, 560, 853
PstI CTGCAG 1 cut(s) 393
PsuI RGATCY 1 cut(s) 437
RsaI GTAC 4 cut(s) 560, 566, 641, 694
RsaNI GTAC 4 cut(s) 559, 565, 640, 693
RseI CAYNNNNRTG 3 cut(s) 775, 909, 1286
SacI GAGCTC 1 cut(s) 1001
SapI GCTCTTC 1 cut(s) 1224
SaqAI TTAA 5 cut(s) 47, 189, 792, 836, 1346
Sau3AI GATC 5 cut(s) 121, 437, 924, 1263, 1462
SchI GAGTC 1 cut(s) 780
ScrFI CCNGG 4 cut(s) 37, 731, 807, 1449
SduI GDGCHC 3 cut(s) 856, 1001, 1641
SfaNI GCATC 7 cut(s) 35, 633, 655, 1075, 1237, 1360, 1673
SfcI CTRYAG 2 cut(s) 389, 1659
SmiMI CAYNNNNRTG 3 cut(s) 775, 909, 1286
SmlI CTYRAG 3 cut(s) 188, 1314, 1747
SmoI CTYRAG 3 cut(s) 188, 1314, 1747
SpeI ACTAGT 1 cut(s) 862
SphI GCATGC 1 cut(s) 1396
SspMI CTAG 9 cut(s) 57, 291, 443, 662, 783, 863, 983, 1091, 1505
SstI GAGCTC 1 cut(s) 1001
StyD4I CCNGG 4 cut(s) 35, 729, 805, 1447
TaaI ACNGT 4 cut(s) 307, 543, 1420, 1767
TaiI ACGT 2 cut(s) 318, 694
TaqI TCGA 8 cut(s) 108, 597, 736, 1039, 1231, 1284, 1354, 1667
TauI GCSGC 4 cut(s) 63, 428, 434, 1455
TfiI GAWTC 3 cut(s) 40, 236, 1198
Tru1I TTAA 5 cut(s) 47, 189, 792, 836, 1346
Tru9I TTAA 5 cut(s) 47, 189, 792, 836, 1346
TscAI CASTG 4 cut(s) 393, 415, 1384, 1462
TseFI GTSAC 2 cut(s) 1070, 1126
TseI GCWGC 6 cut(s) 320, 428, 527, 956, 986, 1169
Tsp45I GTSAC 2 cut(s) 1070, 1126
TspRI CASTG 4 cut(s) 393, 415, 1384, 1462
Vha464I CTTAAG 1 cut(s) 188
XapI RAATTY 1 cut(s) 940
XbaI TCTAGA 2 cut(s) 290, 442
XceI RCATGY 5 cut(s) 26, 198, 1396, 1729, 1780
XmiI GTMKAC 1 cut(s) 1753
XmnI GAANNNNTTC 2 cut(s) 742, 1499
XspI CTAG 9 cut(s) 57, 291, 443, 662, 783, 863, 983, 1091, 1505
Zsp2I ATGCAT 5 cut(s) 28, 422, 1230, 1353, 1394
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.