RchiOBHm_Chr5g0041371

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000157
Physical Location & Seq
Reverse (-)
36122015 .. 36124115
2101 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31981

Sequence Viewer

Length: 1707 bp
ATGATTAAACCCCAAGCAGGAGAAGAATCCCTTAAGACACGTGTTGCCCTCTATAAGTCTGCACTAAAAGGCGATTGGGAAGCTGCTGAACTAATCTTGAAAAAGGATAGGGGCAGACTTCTGCGAGCTAGCATATCTAGAGGATATGATACAGTCCTTCACGTTGCAGCAGGAACAAGCCATATTCACTTTGTGGAGAAACTGGTCAGCATGATGGAAGTAGAAGACTTAGCACTGCAGGACGTAAATGGAAACACAGCCTTGTGCATTGCTGCTTCGGCTGGATCTCTGGACATTGTCCAGATTTTGATACAAAAGAACAAGTCATTGCTAAAAATTAGAGGCGGTAAAGGTATGGCACCGGCCTATATGGCTGCTGTGTTAGGACAGTCCCAAATGGCATGTTACCTGTACCGGTACCGTGAAAGTAAAGAGATGCTGGAGAAAACCGACCGAGAAAACTTGTTTTTTTCTTGCATCAACAATTGTCTTTACGATTTGGCCTTTCAATTGCTAGATACTGATAAAGCATTAGCGAAGGCACGTACTAGTTCGCAGAAAAATAAAACGGCCTTGCATATCCTGGCTCGAAGACCTTCAGCATTTGGTGGCAGCCAAAGTCCACCAATGTGGACTAGACTCATCAACTCATGTTTGAAGTTCGAATGCAAAAGAAAGTTGAGAGAAGCTAATGGAGCCTTTAAACTAGTCCACAGCCTCTGGGAAGAAATCTTGAGAGATGAGCATGATAACGTGATGAGGCTGATCAAATATCCTTCAAATTTATTATTTGATGCAGCGGAATTAGGGAATTATGAGTTTCTGGCAATGCTTATGAGCTCTTATCCTGAGTTAGTATGGGAAACTAATGAAAAAAATCGAACCATAATCCATGTCGCAGTTCTGCATCGTCACGCAAGTATCTTCAACCTAGTGCATGAAATAGGCTCAATCAAAGATGTCATCGTGACATATGAAGATGATCAGGGTAACAACATTGTGCATATGGCTGCAAAATTAGCACCTCAAAATCAATTGAATCTCGAGTCAGGCGTGGCTCTTCAAATGCATCGAGAGTTGGTATGGTTTGAGGAAGTCAAAAAGATCGTCCAACCTCAATACATCGAGATGGAAAATGACGAAGGAAAAACACCTCAAGAATTATTTACTGAAGAGCATATGGTGTTAATGGCTGAAGGAGAAAAATGGATGAAGGACACTGCAACTTCATGCATGCTCGTTGCAACCATTATCGCAACCGTAGTGTTCTCAGCTGCATTTAGCATACCGGGTGGCACAGATGATCATACTGGAAAACCAAAACTTTTGAAACAGAAAGCCTTTCTAGACTTTACCATAGCTGACGAAGTAGCACTCTTTTCCTCTTCAACTGCAATGTTGATGTTCTTGTTCATCCTTACCTCGCGGTATGCAGAAAATGATTTCCGAAAGTCCTTACCCTTGAAGTTGATGGCAGGACTCACTAGCCTCTTCGTATCTATAGCATCGATGATGATGGCTTTCAGCACTGCCTTCTATCTATCTTGTCAATACGAATCAAAATGGGTTTCAAATTTTACATTTTTATTTGCATTTGTCCCGATTGCTTTGTTTGCGCTTATGAAATTTCCTCTTGTGTCCGACATGTCCTCTTCTATATTTTGCTCAAGTCTACTATTTCAGCCGTGGAAACACATGCTCTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

568

Amino Acids

64.15

Weight (kDa)

6.95

Isoelectric Point (pI)

39.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 53 - 140 5.9e-10 Ankyrin repeats (3 copies)
PGG PF13962 401 - 514 8.9e-27 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 417
AccB1I GGYRCC 2 cut(s) 358, 417
AccI GTMKAC 1 cut(s) 1672
AccII CGCG 1 cut(s) 1426
AciI CCGC 3 cut(s) 345, 800, 1426
AclWI GGATC 1 cut(s) 292
AcsI RAATTY 3 cut(s) 781, 1573, 1625
AcuI CTGAAG 3 cut(s) 582, 1191, 1215
AcvI CACGTG 1 cut(s) 41
AdeI CACNNNGTG 1 cut(s) 193
AfaI GTAC 3 cut(s) 413, 419, 547
AfiI CCNNNNNNNGG 1 cut(s) 17
AflII CTTAAG 1 cut(s) 32
AflIII ACRYGT 3 cut(s) 38, 40, 1644
AgeI ACCGGT 1 cut(s) 414
AhlI ACTAGT 2 cut(s) 548, 706
AjnI CCWGG 1 cut(s) 582
AleI CACNNNNGTG 1 cut(s) 628
AluBI AGCT 6 cut(s) 83, 128, 689, 840, 1274, 1361
AluI AGCT 6 cut(s) 83, 128, 689, 840, 1274, 1361
Alw21I GWGCWC 1 cut(s) 842
AlwI GGATC 1 cut(s) 292
AlwNI CAGNNNCTG 1 cut(s) 720
Ama87I CYCGRG 1 cut(s) 1043
AoxI GGCC 3 cut(s) 363, 501, 570
ApeKI GCWGC 8 cut(s) 83, 167, 272, 374, 612, 797, 1010, 1274
ApoI RAATTY 3 cut(s) 781, 1573, 1625
ArsI GACNNNNNNTTYG 2 cut(s) 1092, 1124
AsiGI ACCGGT 1 cut(s) 414
Asp700I GAANNNNTTC 1 cut(s) 595
Asp718I GGTACC 1 cut(s) 417
AspLEI GCGC 1 cut(s) 1618
AsuC2I CCSGG 1 cut(s) 1290
AsuII TTCGAA 1 cut(s) 663
AsuNHI GCTAGC 1 cut(s) 128
AvaI CYCGRG 1 cut(s) 1043
BaeI ACNNNNGTAYC 2 cut(s) 904, 937
BanI GGYRCC 2 cut(s) 358, 417
BanII GRGCYC 1 cut(s) 842
BbrPI CACGTG 1 cut(s) 41
BbsI GAAGAC 2 cut(s) 231, 598
Bbv12I GWGCWC 1 cut(s) 842
BbvI GCAGC 8 cut(s) 70, 179, 259, 361, 624, 809, 997, 1261
BccI CCATC 4 cut(s) 208, 1123, 1465, 1510
BceAI ACGGC 2 cut(s) 585, 1669
BciT130I CCWGG 1 cut(s) 584
BclI TGATCA 3 cut(s) 765, 982, 1303
BcnI CCSGG 1 cut(s) 1290
BcuI ACTAGT 2 cut(s) 548, 706
BfmI CTRYAG 2 cut(s) 236, 1500
BfrI CTTAAG 1 cut(s) 32
BglI GCCNNNNNGGC 1 cut(s) 371
BisI GCNGC 8 cut(s) 84, 168, 273, 375, 613, 798, 1011, 1275
BlsI GCNGC 8 cut(s) 85, 169, 274, 376, 614, 799, 1012, 1276
Bme1390I CCNGG 2 cut(s) 584, 1290
BmeT110I CYCGRG 1 cut(s) 1043
BmiI GGNNCC 3 cut(s) 360, 419, 697
BmrFI CCNGG 2 cut(s) 584, 1290
BmsI GCATC 6 cut(s) 426, 486, 784, 916, 1078, 1514
BmtI GCTAGC 1 cut(s) 132
BpiI GAAGAC 2 cut(s) 231, 598
BpmI CTGGAG 1 cut(s) 461
Bpu14I TTCGAA 1 cut(s) 663
BpuEI CTTGAG 3 cut(s) 754, 1140, 1651
BpuMI CCSGG 1 cut(s) 1290
Bsa29I ATCGAT 1 cut(s) 1508
BsaAI YACGTR 2 cut(s) 41, 545
BsaJI CCNNGG 1 cut(s) 1685
BsaWI WCCGGW 1 cut(s) 414
Bsc4I CCNNNNNNNGG 1 cut(s) 17
Bse118I RCCGGY 2 cut(s) 361, 414
Bse1I ACTGG 2 cut(s) 207, 1315
Bse3DI GCAATG 4 cut(s) 267, 326, 834, 1401
BseBI CCWGG 1 cut(s) 584
BseCI ATCGAT 1 cut(s) 1508
BseDI CCNNGG 1 cut(s) 1685
BseGI GGATG 2 cut(s) 1215, 1413
BseLI CCNNNNNNNGG 1 cut(s) 17
BseMI GCAATG 4 cut(s) 267, 326, 834, 1401
BseMII CTCAG 2 cut(s) 840, 1284
BseNI ACTGG 2 cut(s) 207, 1315
BseXI GCAGC 8 cut(s) 70, 179, 259, 361, 624, 809, 997, 1261
BsgI GTGCAG 1 cut(s) 45
Bsh1236I CGCG 1 cut(s) 1426
Bsh1285I CGRYCG 1 cut(s) 454
BshFI GGCC 3 cut(s) 365, 503, 572
BshNI GGYRCC 2 cut(s) 358, 417
BshTI ACCGGT 1 cut(s) 414
BshVI ATCGAT 1 cut(s) 1508
BsiEI CGRYCG 1 cut(s) 454
BsiHKAI GWGCWC 1 cut(s) 842
BsiHKCI CYCGRG 1 cut(s) 1043
BsiSI CCGG 3 cut(s) 362, 415, 1289
BslFI GGGAC 2 cut(s) 376, 1583
BslI CCNNNNNNNGG 1 cut(s) 17
BsmFI GGGAC 2 cut(s) 376, 1583
BsmI GAATGC 1 cut(s) 671
BsnI GGCC 3 cut(s) 365, 503, 572
BsoBI CYCGRG 1 cut(s) 1043
Bsp119I TTCGAA 1 cut(s) 663
Bsp1286I GDGCHC 1 cut(s) 842
Bsp143I GATC 5 cut(s) 284, 765, 982, 1104, 1303
BspACI CCGC 3 cut(s) 345, 800, 1426
BspANI GGCC 3 cut(s) 365, 503, 572
BspCNI CTCAG 2 cut(s) 841, 1283
BspDI ATCGAT 1 cut(s) 1508
BspFNI CGCG 1 cut(s) 1426
BspLI GGNNCC 3 cut(s) 360, 419, 697
BspMAI CTGCAG 1 cut(s) 240
BspOI GCTAGC 1 cut(s) 132
BspPI GGATC 1 cut(s) 292
BspQI GCTCTTC 2 cut(s) 1065, 1167
BspT104I TTCGAA 1 cut(s) 663
BspT107I GGYRCC 2 cut(s) 358, 417
BspTI CTTAAG 1 cut(s) 32
BsrDI GCAATG 4 cut(s) 267, 326, 834, 1401
BsrFI RCCGGY 2 cut(s) 361, 414
BsrI ACTGG 2 cut(s) 207, 1315
BssAI RCCGGY 2 cut(s) 361, 414
BssECI CCNNGG 1 cut(s) 1685
BssMI GATC 5 cut(s) 284, 765, 982, 1104, 1303
Bst2UI CCWGG 1 cut(s) 584
Bst4CI ACNGT 4 cut(s) 154, 390, 422, 1261
Bst6I CTCTTC 5 cut(s) 1065, 1167, 1390, 1496, 1657
BstAFI CTTAAG 1 cut(s) 32
BstBAI YACGTR 2 cut(s) 41, 545
BstBI TTCGAA 1 cut(s) 663
BstC8I GCNNGC 3 cut(s) 126, 130, 1235
BstDEI CTNAG 3 cut(s) 229, 849, 1270
BstDSI CCRYGG 1 cut(s) 1685
BstF5I GGATG 2 cut(s) 1215, 1413
BstFNI CGCG 1 cut(s) 1426
BstHHI GCGC 1 cut(s) 1618
BstKTI GATC 5 cut(s) 287, 768, 985, 1107, 1306
BstMBI GATC 5 cut(s) 284, 765, 982, 1104, 1303
BstMCI CGRYCG 1 cut(s) 454
BstMWI GCNNNNNNNGC 5 cut(s) 278, 371, 695, 1019, 1613
BstNI CCWGG 1 cut(s) 584
BstNSI RCATGY 4 cut(s) 405, 1237, 1648, 1699
BstSCI CCNGG 2 cut(s) 582, 1288
BstSFI CTRYAG 2 cut(s) 236, 1500
BstUI CGCG 1 cut(s) 1426
BstV1I GCAGC 8 cut(s) 70, 179, 259, 361, 624, 809, 997, 1261
BstV2I GAAGAC 2 cut(s) 231, 598
BstX2I RGATCY 1 cut(s) 284
BstXI CCANNNNNNTGG 1 cut(s) 630
BstYI RGATCY 1 cut(s) 284
Bsu15I ATCGAT 1 cut(s) 1508
BsuRI GGCC 3 cut(s) 365, 503, 572
BsuTUI ATCGAT 1 cut(s) 1508
BtgI CCRYGG 1 cut(s) 1685
BtsCI GGATG 2 cut(s) 1215, 1413
BtsI GCAGTG 3 cut(s) 233, 1218, 1527
BtsIMutI CAGTG 3 cut(s) 233, 1218, 1527
Cac8I GCNNGC 3 cut(s) 126, 130, 1235
CaiI CAGNNNCTG 1 cut(s) 720
CfoI GCGC 1 cut(s) 1618
Cfr10I RCCGGY 2 cut(s) 361, 414
ClaI ATCGAT 1 cut(s) 1508
Csp6I GTAC 3 cut(s) 412, 418, 546
CspAI ACCGGT 1 cut(s) 414
CviQI GTAC 3 cut(s) 412, 418, 546
DdeI CTNAG 3 cut(s) 229, 849, 1270
DpnI GATC 5 cut(s) 286, 767, 984, 1106, 1305
DpnII GATC 5 cut(s) 284, 765, 982, 1104, 1303
DraI TTTAAA 1 cut(s) 703
DraIII CACNNNGTG 1 cut(s) 193
Eam1104I CTCTTC 5 cut(s) 1065, 1167, 1390, 1496, 1657
EarI CTCTTC 5 cut(s) 1065, 1167, 1390, 1496, 1657
Ecl136II GAGCTC 1 cut(s) 840
Eco24I GRGCYC 1 cut(s) 842
Eco53kI GAGCTC 1 cut(s) 840
Eco57I CTGAAG 3 cut(s) 582, 1191, 1215
Eco72I CACGTG 1 cut(s) 41
Eco88I CYCGRG 1 cut(s) 1043
EcoICRI GAGCTC 1 cut(s) 840
EcoRII CCWGG 1 cut(s) 582
EcoT22I ATGCAT 2 cut(s) 1071, 1235
EcoT38I GRGCYC 1 cut(s) 842
FalI AAGNNNNNCTT 2 cut(s) 15, 47
FaqI GGGAC 2 cut(s) 376, 1583
FauNDI CATATG 3 cut(s) 973, 1005, 1179
FbaI TGATCA 3 cut(s) 765, 982, 1303
FblI GTMKAC 1 cut(s) 1672
Fnu4HI GCNGC 8 cut(s) 84, 168, 273, 375, 613, 798, 1011, 1275
FokI GGATG 2 cut(s) 1222, 1400
FriOI GRGCYC 1 cut(s) 842
Fsp4HI GCNGC 8 cut(s) 84, 168, 273, 375, 613, 798, 1011, 1275
GlaI GCGC 1 cut(s) 1617
GluI GCNGC 8 cut(s) 84, 168, 273, 375, 613, 798, 1011, 1275
GsuI CTGGAG 1 cut(s) 461
HaeIII GGCC 3 cut(s) 365, 503, 572
HapII CCGG 3 cut(s) 362, 415, 1289
HhaI GCGC 1 cut(s) 1618
Hin6I GCGC 1 cut(s) 1616
HinP1I GCGC 1 cut(s) 1616
HinfI GANTC 6 cut(s) 26, 639, 1039, 1046, 1479, 1556
HpaII CCGG 3 cut(s) 362, 415, 1289
Hpy166II GTNNAC 4 cut(s) 623, 633, 712, 1673
Hpy188I TCNGA 2 cut(s) 1448, 1642
Hpy8I GTNNAC 4 cut(s) 623, 633, 712, 1673
HpyAV CCTTC 8 cut(s) 167, 532, 606, 786, 1136, 1190, 1207, 1543
HpyCH4III ACNGT 4 cut(s) 154, 390, 422, 1261
HpyCH4IV ACGT 5 cut(s) 40, 162, 243, 544, 753
HpyF10VI GCNNNNNNNGC 5 cut(s) 278, 371, 695, 1019, 1613
HpyF3I CTNAG 3 cut(s) 229, 849, 1270
HpySE526I ACGT 5 cut(s) 40, 162, 243, 544, 753
HspAI GCGC 1 cut(s) 1616
KpnI GGTACC 1 cut(s) 421
Ksp22I TGATCA 3 cut(s) 765, 982, 1303
Kzo9I GATC 5 cut(s) 284, 765, 982, 1104, 1303
LguI GCTCTTC 2 cut(s) 1065, 1167
LmnI GCTCC 1 cut(s) 695
Lsp1109I GCAGC 8 cut(s) 70, 179, 259, 361, 624, 809, 997, 1261
LweI GCATC 6 cut(s) 426, 486, 784, 916, 1078, 1514
MaeII ACGT 5 cut(s) 40, 162, 243, 544, 753
MaeIII GTNAC 4 cut(s) 404, 911, 967, 989
MalI GATC 5 cut(s) 286, 767, 984, 1106, 1305
MboI GATC 5 cut(s) 284, 765, 982, 1104, 1303
MfeI CAATTG 3 cut(s) 484, 509, 1034
MflI RGATCY 1 cut(s) 284
MhlI GDGCHC 1 cut(s) 842
MlyI GAGTC 3 cut(s) 633, 1055, 1473
MmeI TCCRAC 2 cut(s) 1135, 1665
Mph1103I ATGCAT 2 cut(s) 1071, 1235
MroXI GAANNNNTTC 1 cut(s) 595
MseI TTAA 4 cut(s) 6, 33, 702, 1187
MslI CAYNNNNRTG 2 cut(s) 628, 1127
MspA1I CMGCKG 2 cut(s) 800, 1274
MspCI CTTAAG 1 cut(s) 32
MspI CCGG 3 cut(s) 362, 415, 1289
MspR9I CCNGG 2 cut(s) 584, 1290
MunI CAATTG 3 cut(s) 484, 509, 1034
Mva1269I GAATGC 1 cut(s) 671
MvaI CCWGG 1 cut(s) 584
MvnI CGCG 1 cut(s) 1426
MwoI GCNNNNNNNGC 5 cut(s) 278, 371, 695, 1019, 1613
NciI CCSGG 1 cut(s) 1290
NdeI CATATG 3 cut(s) 973, 1005, 1179
NdeII GATC 5 cut(s) 284, 765, 982, 1104, 1303
NheI GCTAGC 1 cut(s) 128
NlaIV GGNNCC 3 cut(s) 360, 419, 697
NmuCI GTSAC 2 cut(s) 911, 967
NsiI ATGCAT 2 cut(s) 1071, 1235
NspI RCATGY 4 cut(s) 405, 1237, 1648, 1699
NspV TTCGAA 1 cut(s) 663
OliI CACNNNNGTG 1 cut(s) 628
PaeI GCATGC 1 cut(s) 1237
PaeR7I CTCGAG 1 cut(s) 1043
PciI ACATGT 1 cut(s) 1644
PciSI GCTCTTC 2 cut(s) 1065, 1167
PcsI WCGNNNNNNNCGW 1 cut(s) 1050
PctI GAATGC 1 cut(s) 671
PdmI GAANNNNTTC 1 cut(s) 595
PfeI GAWTC 3 cut(s) 26, 1039, 1556
PflFI GACNNNGTC 1 cut(s) 296
PinAI ACCGGT 1 cut(s) 414
PkrI GCNGC 8 cut(s) 85, 169, 274, 376, 614, 799, 1012, 1276
PleI GAGTC 3 cut(s) 633, 1054, 1473
PmaCI CACGTG 1 cut(s) 41
PmlI CACGTG 1 cut(s) 41
PpsI GAGTC 3 cut(s) 633, 1054, 1473
Ppu21I YACGTR 2 cut(s) 41, 545
PscI ACATGT 1 cut(s) 1644
Psp124BI GAGCTC 1 cut(s) 842
Psp6I CCWGG 1 cut(s) 582
PspCI CACGTG 1 cut(s) 41
PspGI CCWGG 1 cut(s) 582
PspN4I GGNNCC 3 cut(s) 360, 419, 697
PstI CTGCAG 1 cut(s) 240
PstNI CAGNNNCTG 1 cut(s) 720
PsuI RGATCY 1 cut(s) 284
PsyI GACNNNGTC 1 cut(s) 296
PvuII CAGCTG 1 cut(s) 1274
RsaI GTAC 3 cut(s) 413, 419, 547
RsaNI GTAC 3 cut(s) 412, 418, 546
RseI CAYNNNNRTG 2 cut(s) 628, 1127
SacI GAGCTC 1 cut(s) 842
SapI GCTCTTC 2 cut(s) 1065, 1167
SaqAI TTAA 4 cut(s) 6, 33, 702, 1187
SatI GCNGC 8 cut(s) 84, 168, 273, 375, 613, 798, 1011, 1275
Sau3AI GATC 5 cut(s) 284, 765, 982, 1104, 1303
SchI GAGTC 3 cut(s) 633, 1055, 1473
ScrFI CCNGG 2 cut(s) 584, 1290
SduI GDGCHC 1 cut(s) 842
SfaNI GCATC 6 cut(s) 426, 486, 784, 916, 1078, 1514
SfcI CTRYAG 2 cut(s) 236, 1500
Sfr274I CTCGAG 1 cut(s) 1043
SfuI TTCGAA 1 cut(s) 663
SlaI CTCGAG 1 cut(s) 1043
SmiMI CAYNNNNRTG 2 cut(s) 628, 1127
SmlI CTYRAG 5 cut(s) 32, 733, 1043, 1155, 1666
SmoI CTYRAG 5 cut(s) 32, 733, 1043, 1155, 1666
SpeI ACTAGT 2 cut(s) 548, 706
SphI GCATGC 1 cut(s) 1237
SsiI CCGC 3 cut(s) 345, 800, 1426
SstI GAGCTC 1 cut(s) 842
StyD4I CCNGG 2 cut(s) 582, 1288
TaaI ACNGT 4 cut(s) 154, 390, 422, 1261
TaiI ACGT 5 cut(s) 43, 165, 246, 547, 756
TaqI TCGA 7 cut(s) 589, 663, 880, 1044, 1072, 1125, 1508
TaqII GACCGA 1 cut(s) 468
TfiI GAWTC 3 cut(s) 26, 1039, 1556
Tru1I TTAA 4 cut(s) 6, 33, 702, 1187
Tru9I TTAA 4 cut(s) 6, 33, 702, 1187
TscAI CASTG 3 cut(s) 240, 1225, 1534
TseFI GTSAC 2 cut(s) 911, 967
TseI GCWGC 8 cut(s) 83, 167, 272, 374, 612, 797, 1010, 1274
Tsp45I GTSAC 2 cut(s) 911, 967
TspDTI ATGAA 7 cut(s) 885, 954, 990, 1218, 1226, 1402, 1637
TspRI CASTG 3 cut(s) 240, 1225, 1534
Tth111I GACNNNGTC 1 cut(s) 296
Vha464I CTTAAG 1 cut(s) 32
XapI RAATTY 3 cut(s) 781, 1573, 1625
XbaI TCTAGA 2 cut(s) 137, 1345
XceI RCATGY 4 cut(s) 405, 1237, 1648, 1699
XhoI CTCGAG 1 cut(s) 1043
XmiI GTMKAC 1 cut(s) 1672
XmnI GAANNNNTTC 1 cut(s) 595
Zsp2I ATGCAT 2 cut(s) 1071, 1235
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.