Prupe.2G015800_v2.0.a1

protein ubiquitination

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000157
Physical Location & Seq
Reverse (-)
1459707 .. 1466296
6590 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G015800.1

Sequence Viewer

Length: 2205 bp
ATGTCCTCTCTTTTCAGTATGTCAACCTCTCCAAGTATTCATGCTTCCTGTTCCTGCTCAGATAAAGGAAAACAGCCAGCCGAACCATGTGGATCTTTGCATAAACCTGCATCAGAAGGTGATGGGGAAGGGGCAAAAGATATCATGGAGAAAGATGAAATTATTGTAGGTGCTAGTATTTCAAAAGGATCGTCTACCGCACTTCATGTTGTAGCTGGAGTGCGACATGCTGACTTTGTCAAGAAGTTGGTGACATTGGTTGATGATATTAATGACAAACCAGCAACTTCAGGAGAAGACCTGCGTAATGAATTTTTCACTTGCATCAAAACTGGGGTTGATGGTGCAACACGTCACAAGCCATCTCGAAACGAATCACTAGCAAGGAAAGGAAGGCCGCCTCTCCGCTTACCTATCACAGCAGAAGACCGAAGATTACGTGGACCTCTGTACGAGGCCGCCCTAGAAGGTGATTGGGAAAGGGCAGAAGAGATCATCAAGAAAAACCCAACTATTGTAGGGGCAAGTATCGCAAAAGGATCGTACACTGCACTTCACGTTGCAGCCGGAGCGCGACGGGTTGACTTTGTAGAGAAGTTGTTGACATTCATTAATGACGAAATTAAACTTCCCTCAAATTACCTAATAAATGACTTAAAACTGCAAGTCGAGAATGAAGGAGCCAATGATGCTGCTTTGTACTTAAGACATGTCCTACGTCTGCAAGACGAAACAGGCAATACTGCTCTGTGTCTGGCTGCTGCTGCTGGATCTGAAAAAATTGCTGAAATTATGATAGGAAAAGATCAAGACCTGCCAAACCAACCCGGTAGTGGGGGAATGAGGCCACTCTATTTCGCTGCTTTGTTTGGACACCAGGAAATGGCAACATGTCTGTTCAAATTATACAAGCCTCCACCAGGACTTTCAGGAGAAGAGTCAGAACAAGAACTGCTTGGGGTATTTTTCAGTTGCATAAAAACTGGTCTCTACGGTTTAGCCTCCGAAATATTCCGAAAAAAGGACAACTTTGCTTCAAAACGTGATAATGATCGTAAGACAGCCTTGCATTTGCTGGCTAAAAAGCCATCCGCATTCAATGCTAAAAATCCAGCCGATGAATTAGTCAACAACCTCTGGAATAAAGTTGGAGAAGAAAAAAACCCTGAAACATTCATAGCCCTATATACAGATCCTTCGCATCTGCTGTTTGACGCAGTGGAATCAGGAAATTCTAAGTTTGTAACTCTGCTTCTTGAAGCTTGTCCAGCTTTGATATGGGATACAAATGACAAAAATTGGAGCATAATACATGCAGCAGTAAAGCATCGTGATGAGAGTGTCTTCAGTAAGATATATGAGATAGGTCTGATCAAGGATATCATAGCCGCCTCCAAAGATAACAAAAATGGTAATACTTTACTTCATTTAGCTGCAGAATTAGCTCCGGAGAGTCGGTTGAATGAGCTACCTGGAGCAGCTTTTCAAATCCAGCGGGAATTAGTATGGTTTGAGGAGGTGAAGAAGGTTATGCAACCTTCGTATAAAGAGATGAAAAATAAATACGACAAAACAGCTGACGAACTGTTCACTTCTGAGCATAGTGACTTACTAAAAGAAGGACGAAAATGGATGAATGGGACAGCACGGTCGTGTACAATCGTGTCAACCCTCATCGCTGGTGCTTTATTTTCAGCAGGAATTACTGTTTCGCTTGGGGGAGCTCATGATTTTAAAAAAGCCTCATTTCAGATTTTCATCATATCAGATGCGATAGCGTTTTTGTTGGCTTTGGGTGCAATATTGATGTTCTTGGCTATCCTCACCTCAACGTATGCCGAACGAGATTTTCGCCAAGACTTGCCCAATAAGTTGATAGGCGGCGTCATATTGCTTTTGTTTTCCATTATAGCGATGATGGTGGCATTGAGCGCGGCTTTTTTTATTGCTTACGGGAAATACTACCTACCTATTTTGGTAACTCTATGTGCAGCTCTGCCAGTGATTCTCTATGTGGTTCAGATTGTTCCCCTTTTCAGCCTCTTTCGCCAAAAGAAATTTGGAGACGTAAAGAGAGAGAGAAAGAAAGGAAGTCCTTTCACCCTCGTTTGGCAAAAGAAATTTGGAGAAGCAAAGGGAAAGGAAAGAAAGGAAGTAGAGCAGAAATTGAAAAAGGCAGAAGCAACCTCACCCCTTGAACCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

735

Amino Acids

80.8

Weight (kDa)

8.12

Isoelectric Point (pI)

35.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1648
Acc36I ACCTGC 3 cut(s) 115, 309, 822
AccB7I CCANNNNNTGG 1 cut(s) 883
AccI GTMKAC 1 cut(s) 194
AccII CGCG 2 cut(s) 574, 1934
AccIII TCCGGA 1 cut(s) 1447
AciI CCGC 9 cut(s) 198, 398, 406, 459, 1092, 1389, 1495, 1881, 1934
AclWI GGATC 5 cut(s) 100, 196, 547, 778, 1187
AcsI RAATTY 4 cut(s) 311, 1231, 2057, 2120
AcuI CTGAAG 2 cut(s) 273, 1330
AcyI GRCGYC 1 cut(s) 1884
AfaI GTAC 4 cut(s) 452, 545, 701, 1657
AfiI CCNNNNNNNGG 6 cut(s) 833, 834, 883, 920, 1021, 2109
AflII CTTAAG 1 cut(s) 703
AflIII ACRYGT 3 cut(s) 350, 709, 890
AgsI TTSAA 9 cut(s) 183, 901, 1038, 1099, 1259, 1462, 1487, 2170, 2198
AjiI CACGTC 1 cut(s) 353
AjnI CCWGG 3 cut(s) 876, 919, 1471
AleI CACNNNNGTG 1 cut(s) 1651
Alw21I GWGCWC 1 cut(s) 1726
Alw26I GTCTC 2 cut(s) 992, 2058
AlwI GGATC 5 cut(s) 100, 196, 547, 778, 1187
Aor13HI TCCGGA 1 cut(s) 1447
AoxI GGCC 3 cut(s) 395, 456, 845
ApoI RAATTY 4 cut(s) 311, 1231, 2057, 2120
ArsI GACNNNNNNTTYG 2 cut(s) 176, 208
AseI ATTAAT 2 cut(s) 270, 612
AspLEI GCGC 2 cut(s) 574, 1934
AspS9I GGNCC 1 cut(s) 443
AsuC2I CCSGG 1 cut(s) 828
AsuHPI GGTGA 7 cut(s) 131, 262, 482, 1531, 1816, 2092, 2181
AvaII GGWCC 1 cut(s) 443
BanII GRGCYC 1 cut(s) 1726
BarI GAAGNNNNNNTAC 4 cut(s) 28, 60, 1236, 1268
BbsI GAAGAC 3 cut(s) 303, 432, 1336
Bbv12I GWGCWC 1 cut(s) 1726
BccI CCATC 5 cut(s) 116, 335, 370, 1096, 1912
BcgI CGANNNNNNTGC 2 cut(s) 522, 556
BciT130I CCWGG 3 cut(s) 878, 921, 1473
BciVI GTATCC 1 cut(s) 1276
BclI TGATCA 1 cut(s) 1371
BcnI CCSGG 1 cut(s) 828
BcoDI GTCTC 2 cut(s) 992, 2058
BfaI CTAG 3 cut(s) 174, 380, 464
BfmI CTRYAG 1 cut(s) 1434
BfrI CTTAAG 1 cut(s) 703
BfuAI ACCTGC 3 cut(s) 115, 309, 822
BfuI GTATCC 1 cut(s) 1276
Bme1390I CCNGG 4 cut(s) 828, 878, 921, 1473
Bme18I GGWCC 1 cut(s) 443
BmgBI CACGTC 1 cut(s) 353
BmgT120I GGNCC 1 cut(s) 443
BmiI GGNNCC 1 cut(s) 682
BmrFI CCNGG 4 cut(s) 828, 878, 921, 1473
BmrI ACTGGG 1 cut(s) 342
BmsI GCATC 6 cut(s) 119, 333, 679, 1210, 1336, 1759
BmuI ACTGGG 1 cut(s) 342
BpiI GAAGAC 3 cut(s) 303, 432, 1336
BpmI CTGGAG 2 cut(s) 237, 1494
BpuMI CCSGG 1 cut(s) 828
BsaAI YACGTR 1 cut(s) 440
BsaBI GATNNNNATC 2 cut(s) 1050, 1757
BsaHI GRCGYC 1 cut(s) 1884
BsaI GGTCTC 1 cut(s) 992
BsaWI WCCGGW 1 cut(s) 1447
BsaXI ACNNNNNCTCC 2 cut(s) 1442, 1472
Bsc4I CCNNNNNNNGG 6 cut(s) 833, 834, 883, 920, 1021, 2109
Bse1I ACTGG 3 cut(s) 337, 988, 2000
Bse8I GATNNNNATC 2 cut(s) 1050, 1757
BseAI TCCGGA 1 cut(s) 1447
BseBI CCWGG 3 cut(s) 878, 921, 1473
BseGI GGATG 2 cut(s) 1088, 1638
BseJI GATNNNNATC 2 cut(s) 1050, 1757
BseLI CCNNNNNNNGG 6 cut(s) 833, 834, 883, 920, 1021, 2109
BseMII CTCAG 2 cut(s) 72, 1587
BseNI ACTGG 3 cut(s) 337, 988, 2000
BseRI GAGGAG 1 cut(s) 1529
BsgI GTGCAG 2 cut(s) 534, 2010
Bsh1236I CGCG 2 cut(s) 574, 1934
Bsh1285I CGRYCG 1 cut(s) 1652
BshFI GGCC 3 cut(s) 397, 458, 847
BsiEI CGRYCG 1 cut(s) 1652
BsiHKAI GWGCWC 1 cut(s) 1726
BsiSI CCGG 3 cut(s) 567, 828, 1448
BslFI GGGAC 1 cut(s) 1654
BslI CCNNNNNNNGG 6 cut(s) 833, 834, 883, 920, 1021, 2109
BsmAI GTCTC 2 cut(s) 992, 2058
BsmBI CGTCTC 1 cut(s) 2058
BsmFI GGGAC 1 cut(s) 1654
BsmI GAATGC 1 cut(s) 1094
BsnI GGCC 3 cut(s) 397, 458, 847
Bso31I GGTCTC 1 cut(s) 992
Bsp1286I GDGCHC 1 cut(s) 1726
Bsp13I TCCGGA 1 cut(s) 1447
Bsp1407I TGTACA 1 cut(s) 1655
Bsp143I GATC 9 cut(s) 92, 188, 492, 539, 770, 805, 1051, 1192, 1371
BspACI CCGC 9 cut(s) 198, 398, 406, 459, 1092, 1389, 1495, 1881, 1934
BspANI GGCC 3 cut(s) 397, 458, 847
BspCNI CTCAG 2 cut(s) 71, 1588
BspEI TCCGGA 1 cut(s) 1447
BspFNI CGCG 2 cut(s) 574, 1934
BspHI TCATGA 1 cut(s) 1726
BspLI GGNNCC 1 cut(s) 682
BspMAI CTGCAG 1 cut(s) 1438
BspMI ACCTGC 3 cut(s) 115, 309, 822
BspPI GGATC 5 cut(s) 100, 196, 547, 778, 1187
BspTI CTTAAG 1 cut(s) 703
BspTNI GGTCTC 1 cut(s) 992
BsrGI TGTACA 1 cut(s) 1655
BsrI ACTGG 3 cut(s) 337, 988, 2000
BssMI GATC 9 cut(s) 92, 188, 492, 539, 770, 805, 1051, 1192, 1371
BssNI GRCGYC 1 cut(s) 1884
Bst2UI CCWGG 3 cut(s) 878, 921, 1473
Bst4CI ACNGT 4 cut(s) 995, 1587, 1650, 1708
Bst6I CTCTTC 2 cut(s) 483, 930
BstACI GRCGYC 1 cut(s) 1884
BstAFI CTTAAG 1 cut(s) 703
BstAPI GCANNNNNTGC 1 cut(s) 1100
BstAUI TGTACA 1 cut(s) 1655
BstBAI YACGTR 1 cut(s) 440
BstC8I GCNNGC 2 cut(s) 78, 1077
BstDEI CTNAG 3 cut(s) 58, 1236, 1596
BstENI CCTNNNNNAGG 1 cut(s) 918
BstF5I GGATG 2 cut(s) 1088, 1638
BstFNI CGCG 2 cut(s) 574, 1934
BstHHI GCGC 2 cut(s) 574, 1934
BstKTI GATC 9 cut(s) 95, 191, 495, 542, 773, 808, 1054, 1195, 1374
BstMAI GTCTC 2 cut(s) 992, 2058
BstMBI GATC 9 cut(s) 92, 188, 492, 539, 770, 805, 1051, 1192, 1371
BstMCI CGRYCG 1 cut(s) 1652
BstNI CCWGG 3 cut(s) 878, 921, 1473
BstNSI RCATGY 4 cut(s) 230, 713, 894, 1316
BstSCI CCNGG 4 cut(s) 826, 876, 919, 1471
BstSFI CTRYAG 1 cut(s) 1434
BstUI CGCG 2 cut(s) 574, 1934
BstV2I GAAGAC 3 cut(s) 303, 432, 1336
BstX2I RGATCY 3 cut(s) 92, 770, 1192
BstYI RGATCY 3 cut(s) 92, 770, 1192
BsuI GTATCC 1 cut(s) 1276
BsuRI GGCC 3 cut(s) 397, 458, 847
BtgZI GCGATG 2 cut(s) 1660, 1928
BtrI CACGTC 1 cut(s) 353
BtsCI GGATG 2 cut(s) 1088, 1638
BtsI GCAGTG 2 cut(s) 546, 1224
BtsIMutI CAGTG 3 cut(s) 546, 1224, 2007
BveI ACCTGC 3 cut(s) 115, 309, 822
Cac8I GCNNGC 2 cut(s) 78, 1077
CciI TCATGA 1 cut(s) 1726
CfoI GCGC 2 cut(s) 574, 1934
Cfr13I GGNCC 1 cut(s) 443
CseI GACGC 2 cut(s) 1223, 1873
Csp6I GTAC 4 cut(s) 451, 544, 700, 1656
CviAII CATG 9 cut(s) 41, 87, 145, 206, 227, 710, 891, 1313, 1727
CviQI GTAC 4 cut(s) 451, 544, 700, 1656
DdeI CTNAG 3 cut(s) 58, 1236, 1596
DpnI GATC 9 cut(s) 94, 190, 494, 541, 772, 807, 1053, 1194, 1373
DpnII GATC 9 cut(s) 92, 188, 492, 539, 770, 805, 1051, 1192, 1371
DraI TTTAAA 1 cut(s) 1735
DrdI GACNNNNNNGTC 1 cut(s) 1648
DseDI GACNNNNNNGTC 1 cut(s) 1648
Eam1104I CTCTTC 2 cut(s) 483, 930
EarI CTCTTC 2 cut(s) 483, 930
Ecl136II GAGCTC 1 cut(s) 1724
Eco24I GRGCYC 1 cut(s) 1726
Eco31I GGTCTC 1 cut(s) 992
Eco32I GATATC 2 cut(s) 142, 1381
Eco47I GGWCC 1 cut(s) 443
Eco53kI GAGCTC 1 cut(s) 1724
Eco57I CTGAAG 2 cut(s) 273, 1330
EcoICRI GAGCTC 1 cut(s) 1724
EcoNI CCTNNNNNAGG 1 cut(s) 918
EcoRII CCWGG 3 cut(s) 876, 919, 1471
EcoRV GATATC 2 cut(s) 142, 1381
EcoT38I GRGCYC 1 cut(s) 1726
Esp3I CGTCTC 1 cut(s) 2058
FaeI CATG 9 cut(s) 44, 90, 148, 209, 230, 713, 894, 1316, 1730
FalI AAGNNNNNCTT 6 cut(s) 939, 971, 1013, 1045, 1049, 1081
FaqI GGGAC 1 cut(s) 1654
FatI CATG 9 cut(s) 40, 86, 144, 205, 226, 709, 890, 1312, 1726
FauI CCCGC 1 cut(s) 1488
FbaI TGATCA 1 cut(s) 1371
FblI GTMKAC 1 cut(s) 194
FokI GGATG 2 cut(s) 1075, 1645
FriOI GRGCYC 1 cut(s) 1726
FspBI CTAG 3 cut(s) 174, 380, 464
GlaI GCGC 2 cut(s) 573, 1933
GsuI CTGGAG 2 cut(s) 237, 1494
HaeIII GGCC 3 cut(s) 397, 458, 847
HapII CCGG 3 cut(s) 567, 828, 1448
HgaI GACGC 2 cut(s) 1223, 1873
HhaI GCGC 2 cut(s) 574, 1934
Hin1I GRCGYC 1 cut(s) 1884
Hin1II CATG 9 cut(s) 44, 90, 148, 209, 230, 713, 894, 1316, 1730
Hin6I GCGC 2 cut(s) 572, 1932
HinP1I GCGC 2 cut(s) 572, 1932
HincII GTYRAC 5 cut(s) 24, 583, 603, 1129, 1668
HindII GTYRAC 5 cut(s) 24, 583, 603, 1129, 1668
HindIII AAGCTT 1 cut(s) 1260
HinfI GANTC 5 cut(s) 374, 938, 1223, 1453, 2005
HpaII CCGG 3 cut(s) 567, 828, 1448
HphI GGTGA 7 cut(s) 131, 262, 482, 1531, 1816, 2092, 2181
Hpy99I CGWCG 1 cut(s) 579
HpyAV CCTTC 9 cut(s) 110, 122, 387, 461, 671, 1206, 1519, 1548, 1613
HpyCH4III ACNGT 4 cut(s) 995, 1587, 1650, 1708
HpyCH4IV ACGT 7 cut(s) 352, 439, 558, 718, 1042, 1832, 2067
HpyF3I CTNAG 3 cut(s) 58, 1236, 1596
HpySE526I ACGT 7 cut(s) 352, 439, 558, 718, 1042, 1832, 2067
Hsp92I GRCGYC 1 cut(s) 1884
Hsp92II CATG 9 cut(s) 44, 90, 148, 209, 230, 713, 894, 1316, 1730
HspAI GCGC 2 cut(s) 572, 1932
Kpn2I TCCGGA 1 cut(s) 1447
Ksp22I TGATCA 1 cut(s) 1371
Kzo9I GATC 9 cut(s) 92, 188, 492, 539, 770, 805, 1051, 1192, 1371
LmnI GCTCC 6 cut(s) 569, 680, 1302, 1450, 1475, 1721
LweI GCATC 6 cut(s) 119, 333, 679, 1210, 1336, 1759
MaeI CTAG 3 cut(s) 174, 380, 464
MaeII ACGT 7 cut(s) 352, 439, 558, 718, 1042, 1832, 2067
MaeIII GTNAC 5 cut(s) 250, 353, 1243, 1604, 1978
MalI GATC 9 cut(s) 94, 190, 494, 541, 772, 807, 1053, 1194, 1373
MboI GATC 9 cut(s) 92, 188, 492, 539, 770, 805, 1051, 1192, 1371
MboII GAAGA 8 cut(s) 308, 437, 444, 500, 947, 1166, 1336, 1534
MflI RGATCY 3 cut(s) 92, 770, 1192
MhlI GDGCHC 1 cut(s) 1726
MlyI GAGTC 2 cut(s) 947, 1462
MmeI TCCRAC 1 cut(s) 1129
MroI TCCGGA 1 cut(s) 1447
MseI TTAA 7 cut(s) 270, 612, 624, 656, 704, 1734, 2203
MslI CAYNNNNRTG 2 cut(s) 1332, 1651
MspA1I CMGCKG 2 cut(s) 1495, 1577
MspCI CTTAAG 1 cut(s) 703
MspI CCGG 3 cut(s) 567, 828, 1448
MspR9I CCNGG 4 cut(s) 828, 878, 921, 1473
Mva1269I GAATGC 1 cut(s) 1094
MvaI CCWGG 3 cut(s) 878, 921, 1473
MvnI CGCG 2 cut(s) 574, 1934
NciI CCSGG 1 cut(s) 828
NdeII GATC 9 cut(s) 92, 188, 492, 539, 770, 805, 1051, 1192, 1371
NlaIII CATG 9 cut(s) 44, 90, 148, 209, 230, 713, 894, 1316, 1730
NlaIV GGNNCC 1 cut(s) 682
NmuCI GTSAC 3 cut(s) 250, 353, 1604
NspI RCATGY 4 cut(s) 230, 713, 894, 1316
OliI CACNNNNGTG 1 cut(s) 1651
PagI TCATGA 1 cut(s) 1726
PciI ACATGT 2 cut(s) 709, 890
PctI GAATGC 1 cut(s) 1094
PfeI GAWTC 3 cut(s) 374, 1223, 2005
PflFI GACNNNGTC 1 cut(s) 236
PflMI CCANNNNNTGG 1 cut(s) 883
PleI GAGTC 2 cut(s) 946, 1461
PpsI GAGTC 2 cut(s) 946, 1461
Ppu21I YACGTR 1 cut(s) 440
PscI ACATGT 2 cut(s) 709, 890
PshBI ATTAAT 2 cut(s) 270, 612
Psp124BI GAGCTC 1 cut(s) 1726
Psp6I CCWGG 3 cut(s) 876, 919, 1471
PspGI CCWGG 3 cut(s) 876, 919, 1471
PspN4I GGNNCC 1 cut(s) 682
PspPI GGNCC 1 cut(s) 443
PstI CTGCAG 1 cut(s) 1438
PsuI RGATCY 3 cut(s) 92, 770, 1192
PsyI GACNNNGTC 1 cut(s) 236
PvuII CAGCTG 1 cut(s) 1577
RsaI GTAC 4 cut(s) 452, 545, 701, 1657
RsaNI GTAC 4 cut(s) 451, 544, 700, 1656
RseI CAYNNNNRTG 2 cut(s) 1332, 1651
SacI GAGCTC 1 cut(s) 1726
SaqAI TTAA 7 cut(s) 270, 612, 624, 656, 704, 1734, 2203
Sau3AI GATC 9 cut(s) 92, 188, 492, 539, 770, 805, 1051, 1192, 1371
Sau96I GGNCC 1 cut(s) 443
SchI GAGTC 2 cut(s) 947, 1462
ScrFI CCNGG 4 cut(s) 828, 878, 921, 1473
SduI GDGCHC 1 cut(s) 1726
SfaNI GCATC 6 cut(s) 119, 333, 679, 1210, 1336, 1759
SfcI CTRYAG 1 cut(s) 1434
SinI GGWCC 1 cut(s) 443
SmiMI CAYNNNNRTG 2 cut(s) 1332, 1651
SmlI CTYRAG 1 cut(s) 703
SmoI CTYRAG 1 cut(s) 703
SsiI CCGC 9 cut(s) 198, 398, 406, 459, 1092, 1389, 1495, 1881, 1934
SspI AATATT 2 cut(s) 1011, 1803
SspMI CTAG 3 cut(s) 174, 380, 464
SstI GAGCTC 1 cut(s) 1726
StyD4I CCNGG 4 cut(s) 826, 876, 919, 1471
TaaI ACNGT 4 cut(s) 995, 1587, 1650, 1708
TaiI ACGT 7 cut(s) 355, 442, 561, 721, 1045, 1835, 2070
TaqI TCGA 2 cut(s) 367, 669
TaqII GACCGA 1 cut(s) 444
TatI WGTACW 2 cut(s) 699, 1655
TauI GCSGC 5 cut(s) 400, 461, 1391, 1884, 1937
TfiI GAWTC 3 cut(s) 374, 1223, 2005
Tru1I TTAA 7 cut(s) 270, 612, 624, 656, 704, 1734, 2203
Tru9I TTAA 7 cut(s) 270, 612, 624, 656, 704, 1734, 2203
TscAI CASTG 3 cut(s) 553, 1224, 2007
TseFI GTSAC 3 cut(s) 250, 353, 1604
Tsp45I GTSAC 3 cut(s) 250, 353, 1604
TspRI CASTG 3 cut(s) 553, 1224, 2007
Tth111I GACNNNGTC 1 cut(s) 236
Van91I CCANNNNNTGG 1 cut(s) 883
Vha464I CTTAAG 1 cut(s) 703
VpaK11BI GGWCC 1 cut(s) 443
VspI ATTAAT 2 cut(s) 270, 612
XagI CCTNNNNNAGG 1 cut(s) 918
XapI RAATTY 4 cut(s) 311, 1231, 2057, 2120
XceI RCATGY 4 cut(s) 230, 713, 894, 1316
XcmI CCANNNNNNNNNTGG 3 cut(s) 830, 1275, 2057
XmiI GTMKAC 1 cut(s) 194
XspI CTAG 3 cut(s) 174, 380, 464
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.