Rorug05G0223600

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000157
Physical Location & Seq
Reverse (-)
23191558 .. 23195785
4228 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0223600.1

Sequence Viewer

Length: 1401 bp
ATGGATCAGCAACCGATCGCCGCCAAAACCAACGGCTCAGATTCCTCCTCCTCCTCCGACCTCCCCTACCAGTCCGGCTTCCACAACCACTTCTCCTCCGAAGCTCTCCCCGGCGCTCTCCCCCCCGGCCAGAGCAACCCCCTCCTCTGCCCCTACGGCCTCTACGCCGAGCAACTCTCCGGCACCTCCTTCACCTCCCCCCGCAAGCTCAACCTCCGCACCTGGCTCTACCGCGTCAAGCCCTCCGTCACTCACGAGCCCTTCCAGCCGCTCCGGCCCATCCACGGGAGGCTCGTCAGCGAGTTCAACGACTCCAACAGCTCCACCACTCCGACTCAGCTGAGGTGGAAGCCGGTGGAGATTCCGGAGACGCCGACCGACTTTGTGCAGGGGTTGTACACCGTGTGCGGAGCTGGGAGCTCGTTCCTCCGCCATGGCTTTGCTATTCACATGTACACTGCGAACAAGTCGATGGATGATCGTGCCTTTTGCAATGCTGATGGAGATTTCTTGATAGTCCCCCAATTAGGAAGGCTCTGGATCACTACAGAATGCGGGAGATTGCTAGTTTCTCCTGGTGAAATTGCTGTATTACCTCAAGGATTTAGATTTGCAGTAGATCTTCCTGATGGCCCTTCACGAGGTTATGTAGCTGAGGTTTTTGGCACCCATTTTCAACTCCCTGATCTTGGCCCAATAGGAGCTAATGGCCTTGCTGCTCCAAGGGATTTTCTTGTTCCCACAGCATGGTTTGAAAAAACTACCCGTCCAGGCTACATCATTATACAAAAATTTGGTGGAGAACTTTTTACTGCAAAGCAGGATTTCTCTCCATTCAATGTAGTTGCTTGGCATGGTAATTATGCTCCATATAAGTATGATCTGACGAAGTTCTGCCCATTCAACACAGTCTTGTTTGATCATGGTGATCCTTCTGTAAATACAGTATTGACAGCACCAACTGATAAACCTGGTGTTGCATTGCTGGATTTTGCCATTTTCCCTCCTCGATGGTTGGTTGCTGAGCATACATTCCGACCTCCATACTACCATCGTAATTGTATGAGTGAATTTATGGGACTCATTTACGGTGGATATGAGGCAAAAGCAGATGGGTTTCTTCCAGGTGGTGCAAGCCTCCATAGCTGCATGACTCCCCATGGTCCTGATACGAAGACATATGAGGCTACCATTTCACGCGGAAATGATGTAGGACCACAAAAAATAAGTGATACTATGGCATTTATGTTCGAATCGTGTTTAGTCCCCCGAATTTGCTCATGGGCTCTTGAGTCTCCCTTCGTAGATCATGACTATTACCAGTGCTGGATCGGACTAAGATCACACTTCACAGGCACAGGGGCAGATGCTAAAGATGGAGATATCCAGAATGGTCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

466

Amino Acids

51.44

Weight (kDa)

5.82

Isoelectric Point (pI)

44.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HgmA_N PF20510 23 - 295 1.6e-129 Homogentisate 1,2-dioxygenase N-terminal
HgmA_C PF04209 297 - 450 4.8e-76 Homogentisate 1,2-dioxygenase C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 182, 665
AccB7I CCANNNNNTGG 1 cut(s) 747
AccBSI CCGCTC 1 cut(s) 271
AccII CGCG 2 cut(s) 234, 1200
AccIII TCCGGA 1 cut(s) 364
AciI CCGC 9 cut(s) 21, 202, 217, 232, 269, 408, 430, 555, 1200
AclWI GGATC 4 cut(s) 12, 548, 923, 1337
AcoI YGGCCR 1 cut(s) 127
AcsI RAATTY 3 cut(s) 791, 1070, 1272
AcyI GRCGYC 1 cut(s) 371
AdeI CACNNNGTG 1 cut(s) 405
AfaI GTAC 2 cut(s) 398, 455
AfiI CCNNNNNNNGG 6 cut(s) 284, 285, 527, 641, 689, 747
AflIII ACRYGT 1 cut(s) 450
AgsI TTSAA 5 cut(s) 307, 677, 755, 838, 904
AjnI CCWGG 5 cut(s) 221, 574, 769, 970, 1123
AluBI AGCT 9 cut(s) 104, 208, 321, 340, 413, 420, 653, 704, 1146
AluI AGCT 9 cut(s) 104, 208, 321, 340, 413, 420, 653, 704, 1146
Alw21I GWGCWC 1 cut(s) 422
Alw26I GTCTC 2 cut(s) 362, 1299
AlwI GGATC 4 cut(s) 12, 548, 923, 1337
Aor13HI TCCGGA 1 cut(s) 364
AoxI GGCC 6 cut(s) 127, 157, 275, 631, 691, 709
ApeKI GCWGC 2 cut(s) 716, 1146
ApoI RAATTY 3 cut(s) 791, 1070, 1272
AspLEI GCGC 1 cut(s) 116
AspS9I GGNCC 5 cut(s) 276, 632, 692, 1163, 1214
AsuC2I CCSGG 2 cut(s) 111, 126
AsuHPI GGTGA 3 cut(s) 184, 590, 938
AsuII TTCGAA 1 cut(s) 1251
AvaII GGWCC 2 cut(s) 1163, 1214
BanI GGYRCC 2 cut(s) 182, 665
BanII GRGCYC 3 cut(s) 261, 422, 1288
BauI CACGAG 2 cut(s) 254, 639
BbsI GAAGAC 1 cut(s) 1181
Bbv12I GWGCWC 1 cut(s) 422
BbvCI CCTCAGC 2 cut(s) 341, 654
BbvI GCAGC 2 cut(s) 703, 1133
BccI CCATC 8 cut(s) 287, 466, 494, 623, 1005, 1059, 1106, 1370
BceAI ACGGC 2 cut(s) 49, 172
BciT130I CCWGG 5 cut(s) 223, 576, 771, 972, 1125
BclI TGATCA 1 cut(s) 919
BcnI CCSGG 2 cut(s) 111, 126
BcoDI GTCTC 2 cut(s) 362, 1299
BfaI CTAG 1 cut(s) 566
BfmI CTRYAG 1 cut(s) 546
BfoI RGCGCY 1 cut(s) 117
BglI GCCNNNNNGGC 2 cut(s) 156, 274
BglII AGATCT 1 cut(s) 619
BisI GCNGC 4 cut(s) 21, 269, 717, 1147
BlpI GCTNAGC 1 cut(s) 1023
BlsI GCNGC 4 cut(s) 22, 270, 718, 1148
Bme1390I CCNGG 7 cut(s) 111, 126, 223, 576, 771, 972, 1125
Bme18I GGWCC 2 cut(s) 1163, 1214
BmgT120I GGNCC 5 cut(s) 276, 632, 692, 1163, 1214
BmiI GGNNCC 2 cut(s) 184, 667
BmrFI CCNGG 7 cut(s) 111, 126, 223, 576, 771, 972, 1125
BmsI GCATC 1 cut(s) 1357
BpiI GAAGAC 1 cut(s) 1181
BplI GAGNNNNNCTC 2 cut(s) 161, 193
Bpu10I CCTNAGC 2 cut(s) 341, 654
Bpu1102I GCTNAGC 1 cut(s) 1023
Bpu14I TTCGAA 1 cut(s) 1251
BpuEI CTTGAG 2 cut(s) 582, 1310
BpuMI CCSGG 2 cut(s) 111, 126
BsaHI GRCGYC 1 cut(s) 371
BsaJI CCNNGG 6 cut(s) 109, 124, 283, 433, 722, 1159
BsaWI WCCGGW 1 cut(s) 364
BsaXI ACNNNNNCTCC 4 cut(s) 77, 80, 107, 110
Bsc4I CCNNNNNNNGG 6 cut(s) 284, 285, 527, 641, 689, 747
Bse118I RCCGGY 1 cut(s) 352
Bse1I ACTGG 2 cut(s) 70, 1321
Bse3DI GCAATG 2 cut(s) 499, 980
BseAI TCCGGA 1 cut(s) 364
BseBI CCWGG 5 cut(s) 223, 576, 771, 972, 1125
BseDI CCNNGG 6 cut(s) 109, 124, 283, 433, 722, 1159
BseGI GGATG 2 cut(s) 279, 481
BseLI CCNNNNNNNGG 6 cut(s) 284, 285, 527, 641, 689, 747
BseMI GCAATG 2 cut(s) 499, 980
BseMII CTCAG 5 cut(s) 51, 332, 350, 645, 1014
BseNI ACTGG 2 cut(s) 70, 1321
BseRI GAGGAG 6 cut(s) 37, 40, 43, 85, 134, 996
BseXI GCAGC 2 cut(s) 703, 1133
BseYI CCCAGC 1 cut(s) 413
BsgI GTGCAG 1 cut(s) 407
Bsh1236I CGCG 2 cut(s) 234, 1200
Bsh1285I CGRYCG 2 cut(s) 18, 378
BshFI GGCC 6 cut(s) 129, 159, 277, 633, 693, 711
BshNI GGYRCC 2 cut(s) 182, 665
BsiEI CGRYCG 2 cut(s) 18, 378
BsiHKAI GWGCWC 1 cut(s) 422
BsiSI CCGG 7 cut(s) 75, 111, 126, 180, 274, 353, 365
BslFI GGGAC 3 cut(s) 503, 1092, 1250
BslI CCNNNNNNNGG 6 cut(s) 284, 285, 527, 641, 689, 747
BsmAI GTCTC 2 cut(s) 362, 1299
BsmBI CGTCTC 1 cut(s) 362
BsmFI GGGAC 3 cut(s) 503, 1092, 1250
BsmI GAATGC 1 cut(s) 557
BsnI GGCC 6 cut(s) 129, 159, 277, 633, 693, 711
Bsp119I TTCGAA 1 cut(s) 1251
Bsp1286I GDGCHC 3 cut(s) 261, 422, 1288
Bsp13I TCCGGA 1 cut(s) 364
Bsp1407I TGTACA 2 cut(s) 396, 453
Bsp1720I GCTNAGC 1 cut(s) 1023
Bsp19I CCATGG 2 cut(s) 433, 1159
BspACI CCGC 9 cut(s) 21, 202, 217, 232, 269, 408, 430, 555, 1200
BspANI GGCC 6 cut(s) 129, 159, 277, 633, 693, 711
BspCNI CTCAG 5 cut(s) 50, 333, 349, 646, 1015
BspEI TCCGGA 1 cut(s) 364
BspFNI CGCG 2 cut(s) 234, 1200
BspHI TCATGA 1 cut(s) 1309
BspLI GGNNCC 2 cut(s) 184, 667
BspPI GGATC 4 cut(s) 12, 548, 923, 1337
BspT104I TTCGAA 1 cut(s) 1251
BspT107I GGYRCC 2 cut(s) 182, 665
BsrBI CCGCTC 1 cut(s) 271
BsrDI GCAATG 2 cut(s) 499, 980
BsrFI RCCGGY 1 cut(s) 352
BsrGI TGTACA 2 cut(s) 396, 453
BsrI ACTGG 2 cut(s) 70, 1321
BssAI RCCGGY 1 cut(s) 352
BssECI CCNNGG 6 cut(s) 109, 124, 283, 433, 722, 1159
BssNI GRCGYC 1 cut(s) 371
BssSI CACGAG 2 cut(s) 254, 639
BssT1I CCWWGG 3 cut(s) 433, 722, 1159
Bst2BI CACGAG 2 cut(s) 254, 639
Bst2UI CCWGG 5 cut(s) 223, 576, 771, 972, 1125
Bst4CI ACNGT 4 cut(s) 403, 910, 946, 1091
BstACI GRCGYC 1 cut(s) 371
BstAUI TGTACA 2 cut(s) 396, 453
BstBI TTCGAA 1 cut(s) 1251
BstC8I GCNNGC 2 cut(s) 206, 1135
BstDEI CTNAG 6 cut(s) 37, 336, 341, 654, 1023, 1337
BstDSI CCRYGG 3 cut(s) 283, 433, 1159
BstENI CCTNNNNNAGG 1 cut(s) 639
BstF5I GGATG 2 cut(s) 279, 481
BstFNI CGCG 2 cut(s) 234, 1200
BstH2I RGCGCY 1 cut(s) 117
BstHHI GCGC 1 cut(s) 116
BstMAI GTCTC 2 cut(s) 362, 1299
BstMCI CGRYCG 2 cut(s) 18, 378
BstMWI GCNNNNNNNGC 4 cut(s) 156, 265, 274, 1143
BstNI CCWGG 5 cut(s) 223, 576, 771, 972, 1125
BstNSI RCATGY 1 cut(s) 454
BstSCI CCNGG 7 cut(s) 109, 124, 221, 574, 769, 970, 1123
BstSFI CTRYAG 1 cut(s) 546
BstUI CGCG 2 cut(s) 234, 1200
BstV1I GCAGC 2 cut(s) 703, 1133
BstV2I GAAGAC 1 cut(s) 1181
BstX2I RGATCY 1 cut(s) 619
BstYI RGATCY 1 cut(s) 619
BsuRI GGCC 6 cut(s) 129, 159, 277, 633, 693, 711
BtgI CCRYGG 3 cut(s) 283, 433, 1159
BtsCI GGATG 2 cut(s) 279, 481
BtsI GCAGTG 1 cut(s) 456
BtsIMutI CAGTG 2 cut(s) 456, 1328
Cac8I GCNNGC 2 cut(s) 206, 1135
CciI TCATGA 1 cut(s) 1309
CfoI GCGC 1 cut(s) 116
Cfr10I RCCGGY 1 cut(s) 352
Cfr13I GGNCC 5 cut(s) 276, 632, 692, 1163, 1214
CseI GACGC 2 cut(s) 223, 379
CsiI ACCWGGT 1 cut(s) 970
Csp6I GTAC 2 cut(s) 397, 454
CviAII CATG 9 cut(s) 434, 451, 747, 854, 923, 1150, 1160, 1281, 1310
CviQI GTAC 2 cut(s) 397, 454
DdeI CTNAG 6 cut(s) 37, 336, 341, 654, 1023, 1337
DraIII CACNNNGTG 1 cut(s) 405
EaeI YGGCCR 1 cut(s) 127
EciI GGCGGA 1 cut(s) 419
Ecl136II GAGCTC 1 cut(s) 420
Eco130I CCWWGG 3 cut(s) 433, 722, 1159
Eco24I GRGCYC 3 cut(s) 261, 422, 1288
Eco32I GATATC 1 cut(s) 1384
Eco47I GGWCC 2 cut(s) 1163, 1214
Eco53kI GAGCTC 1 cut(s) 420
EcoICRI GAGCTC 1 cut(s) 420
EcoNI CCTNNNNNAGG 1 cut(s) 639
EcoRII CCWGG 5 cut(s) 221, 574, 769, 970, 1123
EcoRV GATATC 1 cut(s) 1384
EcoT14I CCWWGG 3 cut(s) 433, 722, 1159
EcoT38I GRGCYC 3 cut(s) 261, 422, 1288
ErhI CCWWGG 3 cut(s) 433, 722, 1159
Esp3I CGTCTC 1 cut(s) 362
FaeI CATG 9 cut(s) 437, 454, 750, 857, 926, 1153, 1163, 1284, 1313
FaqI GGGAC 3 cut(s) 503, 1092, 1250
FatI CATG 9 cut(s) 433, 450, 746, 853, 922, 1149, 1159, 1280, 1309
FauI CCCGC 2 cut(s) 209, 548
FauNDI CATATG 1 cut(s) 1180
FbaI TGATCA 1 cut(s) 919
Fnu4HI GCNGC 4 cut(s) 21, 269, 717, 1147
FokI GGATG 2 cut(s) 266, 488
FriOI GRGCYC 3 cut(s) 261, 422, 1288
Fsp4HI GCNGC 4 cut(s) 21, 269, 717, 1147
FspBI CTAG 1 cut(s) 566
GlaI GCGC 1 cut(s) 115
GluI GCNGC 4 cut(s) 21, 269, 717, 1147
GsaI CCCAGC 1 cut(s) 417
HaeII RGCGCY 1 cut(s) 117
HaeIII GGCC 6 cut(s) 129, 159, 277, 633, 693, 711
HapII CCGG 7 cut(s) 75, 111, 126, 180, 274, 353, 365
HgaI GACGC 2 cut(s) 223, 379
HhaI GCGC 1 cut(s) 116
Hin1I GRCGYC 1 cut(s) 371
Hin1II CATG 9 cut(s) 437, 454, 750, 857, 926, 1153, 1163, 1284, 1313
Hin6I GCGC 1 cut(s) 114
HinP1I GCGC 1 cut(s) 114
HinfI GANTC 8 cut(s) 41, 311, 334, 361, 1080, 1153, 1253, 1292
HpaII CCGG 7 cut(s) 75, 111, 126, 180, 274, 353, 365
HphI GGTGA 3 cut(s) 184, 590, 938
Hpy166II GTNNAC 2 cut(s) 399, 456
Hpy188I TCNGA 7 cut(s) 40, 58, 100, 333, 885, 1037, 1334
Hpy8I GTNNAC 2 cut(s) 399, 456
HpyAV CCTTC 6 cut(s) 199, 271, 525, 645, 942, 1309
HpyCH4III ACNGT 4 cut(s) 403, 910, 946, 1091
HpyCH4V TGCA 7 cut(s) 388, 492, 614, 815, 980, 1133, 1149
HpyF10VI GCNNNNNNNGC 4 cut(s) 156, 265, 274, 1143
HpyF3I CTNAG 6 cut(s) 37, 336, 341, 654, 1023, 1337
Hsp92I GRCGYC 1 cut(s) 371
Hsp92II CATG 9 cut(s) 437, 454, 750, 857, 926, 1153, 1163, 1284, 1313
HspAI GCGC 1 cut(s) 114
Kpn2I TCCGGA 1 cut(s) 364
Ksp22I TGATCA 1 cut(s) 919
LmnI GCTCC 7 cut(s) 276, 326, 410, 417, 701, 724, 871
Lsp1109I GCAGC 2 cut(s) 703, 1133
LweI GCATC 1 cut(s) 1357
MabI ACCWGGT 1 cut(s) 970
MaeI CTAG 1 cut(s) 566
MaeIII GTNAC 1 cut(s) 247
MbiI CCGCTC 1 cut(s) 271
MboII GAAGA 3 cut(s) 614, 1112, 1186
MflI RGATCY 1 cut(s) 619
MhlI GDGCHC 3 cut(s) 261, 422, 1288
MluCI AATT 7 cut(s) 524, 582, 791, 859, 1057, 1070, 1272
MlyI GAGTC 5 cut(s) 305, 328, 1074, 1147, 1301
MmeI TCCRAC 4 cut(s) 81, 339, 356, 1060
MroI TCCGGA 1 cut(s) 364
MspA1I CMGCKG 1 cut(s) 340
MspI CCGG 7 cut(s) 75, 111, 126, 180, 274, 353, 365
MspR9I CCNGG 7 cut(s) 111, 126, 223, 576, 771, 972, 1125
Mva1269I GAATGC 1 cut(s) 557
MvaI CCWGG 5 cut(s) 223, 576, 771, 972, 1125
MvnI CGCG 2 cut(s) 234, 1200
MwoI GCNNNNNNNGC 4 cut(s) 156, 265, 274, 1143
NciI CCSGG 2 cut(s) 111, 126
NcoI CCATGG 2 cut(s) 433, 1159
NdeI CATATG 1 cut(s) 1180
NlaIII CATG 9 cut(s) 437, 454, 750, 857, 926, 1153, 1163, 1284, 1313
NlaIV GGNNCC 2 cut(s) 184, 667
NmeAIII GCCGAG 1 cut(s) 193
NmuCI GTSAC 1 cut(s) 247
NspI RCATGY 1 cut(s) 454
NspV TTCGAA 1 cut(s) 1251
PagI TCATGA 1 cut(s) 1309
PciI ACATGT 1 cut(s) 450
PcsI WCGNNNNNNNCGW 1 cut(s) 291
PctI GAATGC 1 cut(s) 557
PfeI GAWTC 3 cut(s) 41, 361, 1253
PflMI CCANNNNNTGG 1 cut(s) 747
PkrI GCNGC 4 cut(s) 22, 270, 718, 1148
Ple19I CGATCG 1 cut(s) 18
PleI GAGTC 5 cut(s) 305, 328, 1074, 1147, 1300
PpsI GAGTC 5 cut(s) 305, 328, 1074, 1147, 1300
PscI ACATGT 1 cut(s) 450
Psp124BI GAGCTC 1 cut(s) 422
Psp6I CCWGG 5 cut(s) 221, 574, 769, 970, 1123
PspFI CCCAGC 1 cut(s) 413
PspGI CCWGG 5 cut(s) 221, 574, 769, 970, 1123
PspN4I GGNNCC 2 cut(s) 184, 667
PspPI GGNCC 5 cut(s) 276, 632, 692, 1163, 1214
PsuI RGATCY 1 cut(s) 619
PvuI CGATCG 1 cut(s) 18
PvuII CAGCTG 1 cut(s) 340
RsaI GTAC 2 cut(s) 398, 455
RsaNI GTAC 2 cut(s) 397, 454
SacI GAGCTC 1 cut(s) 422
SatI GCNGC 4 cut(s) 21, 269, 717, 1147
Sau96I GGNCC 5 cut(s) 276, 632, 692, 1163, 1214
SchI GAGTC 5 cut(s) 305, 328, 1074, 1147, 1301
ScrFI CCNGG 7 cut(s) 111, 126, 223, 576, 771, 972, 1125
SduI GDGCHC 3 cut(s) 261, 422, 1288
SexAI ACCWGGT 1 cut(s) 970
SfaNI GCATC 1 cut(s) 1357
SfcI CTRYAG 1 cut(s) 546
SfuI TTCGAA 1 cut(s) 1251
SinI GGWCC 2 cut(s) 1163, 1214
SmlI CTYRAG 2 cut(s) 597, 1289
SmoI CTYRAG 2 cut(s) 597, 1289
Sse9I AATT 7 cut(s) 524, 582, 791, 859, 1057, 1070, 1272
SsiI CCGC 9 cut(s) 21, 202, 217, 232, 269, 408, 430, 555, 1200
SspMI CTAG 1 cut(s) 566
SstI GAGCTC 1 cut(s) 422
StyD4I CCNGG 7 cut(s) 109, 124, 221, 574, 769, 970, 1123
StyI CCWWGG 3 cut(s) 433, 722, 1159
TaaI ACNGT 4 cut(s) 403, 910, 946, 1091
TaqI TCGA 3 cut(s) 470, 1009, 1251
TaqII GACCGA 1 cut(s) 392
TasI AATT 7 cut(s) 524, 582, 791, 859, 1057, 1070, 1272
TatI WGTACW 2 cut(s) 396, 453
TauI GCSGC 2 cut(s) 23, 271
TfiI GAWTC 3 cut(s) 41, 361, 1253
TscAI CASTG 2 cut(s) 463, 1328
TseFI GTSAC 1 cut(s) 247
TseI GCWGC 2 cut(s) 716, 1146
Tsp45I GTSAC 1 cut(s) 247
TspGWI ACGGA 1 cut(s) 235
TspRI CASTG 2 cut(s) 463, 1328
Van91I CCANNNNNTGG 1 cut(s) 747
VpaK11BI GGWCC 2 cut(s) 1163, 1214
XagI CCTNNNNNAGG 1 cut(s) 639
XapI RAATTY 3 cut(s) 791, 1070, 1272
XceI RCATGY 1 cut(s) 454
XspI CTAG 1 cut(s) 566
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.