Rmu_ssc0000398.1_g000025

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000398.1
OG0000157
Physical Location & Seq
Forward (+)
96740 .. 99835
3096 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000398.1_g000025.1.cds

Sequence Viewer

Length: 1965 bp
atgagctcattgtcgagatctttcggccactcaactccaagcctaaccacaactctccagtttcggtggctttggtttcggctgtcgtgggtggttcttctcgcagagttcggttctccaccttacgacgccgtttggatcttctcaaggtcaggttcttctggtgagactcggtgttgtccctctccacttccaagtccatcgacgacggtggaaccacaacagcgctggagtagaatgtttgaagatcgagggcttggagagctataccttaatacatgtgtgccactcaataagtatgcactaaaaggcaattgggaagctgctgaacgaattttgaggaatgatccaaggcttttgacttatagcataacaagaggatgggacactgtccttcacattgcagcaggggcaagacatgttcactttgtggagaagctggtagaaatgatggaagaattgaatggacaggagaaatgttcacaagacttggcactgcaagacatgaatggaaacactgccttcagcattgctgctgcagcaggaagtattgaaattgcacatattatgatgaagaagaataagtatttgccagtaattcgaggcggtgaaggaatgacaccactctatatggccgccttgttggggcagtctgtaatggcagataacctgtactcaagaaccaaggaaatgttagaggaagccgaccgacaagcgttgttttttacttgtatcgataatggtttgtatgatctagctatgaagatgctaagaagtgatagagcattagctaaggctcgtaatgcaaaacaagaaacagctttgcatatcttggctagaacgccttcagaattcaccagccaaagtccaggaatgtggagtagactcatcaactcatttatcccaggttggaagttctcatacaatggaaacatgaaacaaatcaatgaagcccttcaactagtcaaatgcctttggacagaaatcttgagaaatgatcatgacgatgtgatgagactaatcaaacatccttcaaaattactgtttgatgctacaaaattaggaaattatgagttcctggcagtgcttattaactcttatccagatttaatatggcaacttgatgacgaaaatcggagtataatccatgttgctgttttgcatcgtcatgcaagtatcttcaatttagtgcatgagataggctctatcaaggatatgatagtgacatttactgataatgatgagactaataacattttacatatggctgcaaaattagcacccccaaatcaactcaaccttgtatcaggagcagctcttcaaatgcagcgagagttggcatggtttgaggaagtaaaaaagattgtacaacccaactccatagagatgaaaaacaagaaaggaaacacaccacgagaattgttcacaagtgagcataaagagttgttacacaaaggagaagcatggatgaaggacactgcaaattcatgcatgattgttgcggctcttatcgcaactgttgtattttcagctgcatttagcgtacctggtggtacgtctgataatacaggacaaccaaactttctaaaagagactgctttcctattctttgccatagcagatggagtagcactcgtttcctcttcaacttcaatactgatgttcttgttcatcctcacatcgcgttacgctgaaggtgattttctcaaatcgttaccgttgaagttgatgataggactcgcatcgcttttcatatctatagcatccatgatggtagcttttagcacaaccttctatttagactgtcattatggattaggatgggtcccaaatcttatatttgtatttgcatttgtcccggttgctttgtttgcttttctgcagtttcctctcttgtctgatatgttttcttctacatattgttcaagtcttttatttcagccatggaaacatatgatcgactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

654

Amino Acids

73.64

Weight (kDa)

6.51

Isoelectric Point (pI)

47.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 883
AccII CGCG 1 cut(s) 1684
AciI CCGC 3 cut(s) 606, 636, 1502
AclWI GGATC 2 cut(s) 146, 341
AcoI YGGCCR 2 cut(s) 25, 633
AcsI RAATTY 3 cut(s) 333, 851, 1483
AcuI CTGAAG 3 cut(s) 508, 831, 1713
AcyI GRCGYC 1 cut(s) 129
AdeI CACNNNGTG 1 cut(s) 430
AfaI GTAC 4 cut(s) 674, 1368, 1545, 1555
AfeI AGCGCT 1 cut(s) 227
AfiI CCNNNNNNNGG 1 cut(s) 645
AflIII ACRYGT 2 cut(s) 278, 418
AhlI ACTAGT 1 cut(s) 961
AjnI CCWGG 4 cut(s) 868, 904, 1077, 1546
Alw21I GWGCWC 1 cut(s) 8
Alw26I GTCTC 4 cut(s) 161, 1009, 1238, 1586
AlwI GGATC 2 cut(s) 146, 341
Aor51HI AGCGCT 1 cut(s) 227
AoxI GGCC 2 cut(s) 25, 633
ApeKI GCWGC 9 cut(s) 323, 404, 533, 536, 539, 1268, 1313, 1327, 1532
ApoI RAATTY 3 cut(s) 333, 851, 1483
Asp700I GAANNNNTTC 2 cut(s) 844, 954
AspLEI GCGC 1 cut(s) 228
AspS9I GGNCC 1 cut(s) 1825
AsuC2I CCSGG 1 cut(s) 1859
AsuHPI GGTGA 4 cut(s) 176, 620, 847, 1709
AvaII GGWCC 1 cut(s) 1825
BanII GRGCYC 1 cut(s) 8
BarI GAAGNNNNNNTAC 2 cut(s) 905, 937
BauI CACGAG 1 cut(s) 1413
Bbv12I GWGCWC 1 cut(s) 8
BbvI GCAGC 9 cut(s) 310, 416, 520, 523, 551, 1255, 1325, 1339, 1519
BccI CCATC 6 cut(s) 208, 375, 445, 1616, 1765, 1815
BceAI ACGGC 1 cut(s) 116
BciT130I CCWGG 4 cut(s) 870, 906, 1079, 1548
BclI TGATCA 1 cut(s) 997
BcnI CCSGG 1 cut(s) 1859
BcoDI GTCTC 4 cut(s) 161, 1009, 1238, 1586
BcuI ACTAGT 1 cut(s) 961
BfaI CTAG 4 cut(s) 755, 837, 962, 1963
BfmI CTRYAG 3 cut(s) 537, 1758, 1880
BfoI RGCGCY 1 cut(s) 229
BglII AGATCT 1 cut(s) 17
Bme1390I CCNGG 5 cut(s) 870, 906, 1079, 1548, 1859
Bme18I GGWCC 1 cut(s) 1825
BmgT120I GGNCC 1 cut(s) 1825
BmiI GGNNCC 3 cut(s) 216, 1826, 1827
BmrFI CCNGG 5 cut(s) 870, 906, 1079, 1548, 1859
BmsI GCATC 5 cut(s) 756, 1039, 1171, 1751, 1772
BplI GAGNNNNNCTC 4 cut(s) 1187, 1219, 1617, 1649
BpmI CTGGAG 2 cut(s) 41, 250
Bpu10I CCTNAGC 1 cut(s) 792
BpuEI CTTGAG 3 cut(s) 130, 661, 1009
BpuMI CCSGG 1 cut(s) 1859
Bsa29I ATCGAT 1 cut(s) 735
BsaHI GRCGYC 1 cut(s) 129
BsaJI CCNNGG 4 cut(s) 350, 684, 904, 1943
Bsc4I CCNNNNNNNGG 1 cut(s) 645
Bse1I ACTGG 2 cut(s) 58, 593
Bse3DI GCAATG 2 cut(s) 399, 528
BseBI CCWGG 4 cut(s) 870, 906, 1079, 1548
BseCI ATCGAT 1 cut(s) 735
BseDI CCNNGG 4 cut(s) 350, 684, 904, 1943
BseGI GGATG 6 cut(s) 386, 1027, 1473, 1671, 1763, 1826
BseLI CCNNNNNNNGG 1 cut(s) 645
BseMI GCAATG 2 cut(s) 399, 528
BseNI ACTGG 2 cut(s) 58, 593
BseXI GCAGC 9 cut(s) 310, 416, 520, 523, 551, 1255, 1325, 1339, 1519
Bsh1236I CGCG 1 cut(s) 1684
Bsh1285I CGRYCG 1 cut(s) 709
BshFI GGCC 2 cut(s) 27, 635
BshVI ATCGAT 1 cut(s) 735
BsiEI CGRYCG 1 cut(s) 709
BsiHKAI GWGCWC 1 cut(s) 8
BsiSI CCGG 1 cut(s) 1859
BslFI GGGAC 4 cut(s) 165, 398, 1811, 1841
BslI CCNNNNNNNGG 1 cut(s) 645
BsmAI GTCTC 4 cut(s) 161, 1009, 1238, 1586
BsmFI GGGAC 4 cut(s) 165, 398, 1811, 1841
BsnI GGCC 2 cut(s) 27, 635
Bsp1286I GDGCHC 1 cut(s) 8
Bsp1407I TGTACA 1 cut(s) 1366
Bsp143I GATC 7 cut(s) 17, 138, 247, 346, 751, 997, 1956
Bsp19I CCATGG 1 cut(s) 1943
BspACI CCGC 3 cut(s) 606, 636, 1502
BspANI GGCC 2 cut(s) 27, 635
BspDI ATCGAT 1 cut(s) 735
BspFNI CGCG 1 cut(s) 1684
BspHI TCATGA 1 cut(s) 1000
BspLI GGNNCC 3 cut(s) 216, 1826, 1827
BspMAI CTGCAG 2 cut(s) 541, 1884
BspPI GGATC 2 cut(s) 146, 341
BspQI GCTCTTC 1 cut(s) 1323
BsrDI GCAATG 2 cut(s) 399, 528
BsrGI TGTACA 1 cut(s) 1366
BsrI ACTGG 2 cut(s) 58, 593
BssECI CCNNGG 4 cut(s) 350, 684, 904, 1943
BssMI GATC 7 cut(s) 17, 138, 247, 346, 751, 997, 1956
BssNI GRCGYC 1 cut(s) 129
BssSI CACGAG 1 cut(s) 1413
BssT1I CCWWGG 3 cut(s) 350, 684, 1943
Bst2BI CACGAG 1 cut(s) 1413
Bst2UI CCWGG 4 cut(s) 870, 906, 1079, 1548
Bst4CI ACNGT 6 cut(s) 211, 391, 1044, 1519, 1719, 1805
Bst6I CTCTTC 2 cut(s) 1323, 1648
BstACI GRCGYC 1 cut(s) 129
BstAUI TGTACA 1 cut(s) 1366
BstDEI CTNAG 2 cut(s) 770, 792
BstDSI CCRYGG 1 cut(s) 1943
BstF5I GGATG 6 cut(s) 386, 1027, 1473, 1671, 1763, 1826
BstFNI CGCG 1 cut(s) 1684
BstH2I RGCGCY 1 cut(s) 229
BstHHI GCGC 1 cut(s) 228
BstKTI GATC 7 cut(s) 20, 141, 250, 349, 754, 1000, 1959
BstMAI GTCTC 4 cut(s) 161, 1009, 1238, 1586
BstMBI GATC 7 cut(s) 17, 138, 247, 346, 751, 997, 1956
BstMCI CGRYCG 1 cut(s) 709
BstMWI GCNNNNNNNGC 7 cut(s) 262, 410, 539, 803, 1277, 1511, 1871
BstNI CCWGG 4 cut(s) 870, 906, 1079, 1548
BstNSI RCATGY 2 cut(s) 282, 422
BstSCI CCNGG 5 cut(s) 868, 904, 1077, 1546, 1857
BstSFI CTRYAG 3 cut(s) 537, 1758, 1880
BstUI CGCG 1 cut(s) 1684
BstV1I GCAGC 9 cut(s) 310, 416, 520, 523, 551, 1255, 1325, 1339, 1519
BstX2I RGATCY 2 cut(s) 17, 138
BstXI CCANNNNNNTGG 1 cut(s) 876
BstYI RGATCY 2 cut(s) 17, 138
Bsu15I ATCGAT 1 cut(s) 735
BsuRI GGCC 2 cut(s) 27, 635
BsuTUI ATCGAT 1 cut(s) 735
BtgI CCRYGG 1 cut(s) 1943
BtgZI GCGATG 2 cut(s) 1665, 1728
BtsCI GGATG 6 cut(s) 386, 1027, 1473, 1671, 1763, 1826
BtsI GCAGTG 4 cut(s) 494, 516, 1089, 1476
BtsIMutI CAGTG 5 cut(s) 387, 494, 516, 1089, 1476
CciI TCATGA 1 cut(s) 1000
CfoI GCGC 1 cut(s) 228
Cfr13I GGNCC 1 cut(s) 1825
ClaI ATCGAT 1 cut(s) 735
CseI GACGC 1 cut(s) 137
CsiI ACCWGGT 1 cut(s) 1546
Csp6I GTAC 4 cut(s) 673, 1367, 1544, 1554
CspCI CAANNNNNGTGG 2 cut(s) 1401, 1436
CviQI GTAC 4 cut(s) 673, 1367, 1544, 1554
DdeI CTNAG 2 cut(s) 770, 792
DpnI GATC 7 cut(s) 19, 140, 249, 348, 753, 999, 1958
DpnII GATC 7 cut(s) 17, 138, 247, 346, 751, 997, 1956
DraIII CACNNNGTG 1 cut(s) 430
EaeI YGGCCR 2 cut(s) 25, 633
Eam1104I CTCTTC 2 cut(s) 1323, 1648
EarI CTCTTC 2 cut(s) 1323, 1648
Ecl136II GAGCTC 1 cut(s) 6
Eco130I CCWWGG 3 cut(s) 350, 684, 1943
Eco24I GRGCYC 1 cut(s) 8
Eco47I GGWCC 1 cut(s) 1825
Eco47III AGCGCT 1 cut(s) 227
Eco53kI GAGCTC 1 cut(s) 6
Eco57I CTGAAG 3 cut(s) 508, 831, 1713
EcoICRI GAGCTC 1 cut(s) 6
EcoO109I RGGNCCY 1 cut(s) 1825
EcoRI GAATTC 1 cut(s) 851
EcoRII CCWGG 4 cut(s) 868, 904, 1077, 1546
EcoT14I CCWWGG 3 cut(s) 350, 684, 1943
EcoT22I ATGCAT 1 cut(s) 1493
EcoT38I GRGCYC 1 cut(s) 8
ErhI CCWWGG 3 cut(s) 350, 684, 1943
FaqI GGGAC 4 cut(s) 165, 398, 1811, 1841
FauNDI CATATG 2 cut(s) 1263, 1953
FbaI TGATCA 1 cut(s) 997
FblI GTMKAC 1 cut(s) 883
FokI GGATG 6 cut(s) 393, 1014, 1480, 1658, 1750, 1833
FriOI GRGCYC 1 cut(s) 8
FspBI CTAG 4 cut(s) 755, 837, 962, 1963
GlaI GCGC 1 cut(s) 227
GsuI CTGGAG 2 cut(s) 41, 250
HaeII RGCGCY 1 cut(s) 229
HaeIII GGCC 2 cut(s) 27, 635
HapII CCGG 1 cut(s) 1859
HgaI GACGC 1 cut(s) 137
HhaI GCGC 1 cut(s) 228
Hin1I GRCGYC 1 cut(s) 129
Hin6I GCGC 1 cut(s) 226
HinP1I GCGC 1 cut(s) 226
HinfI GANTC 3 cut(s) 169, 885, 1737
HpaII CCGG 1 cut(s) 1859
HphI GGTGA 4 cut(s) 176, 620, 847, 1709
Hpy166II GTNNAC 4 cut(s) 424, 482, 884, 1425
Hpy188I TCNGA 4 cut(s) 850, 1137, 1561, 1900
Hpy188III TCNNGA 6 cut(s) 15, 678, 988, 1001, 1103, 1308
Hpy8I GTNNAC 4 cut(s) 424, 482, 884, 1425
Hpy99I CGWCG 3 cut(s) 131, 208, 211
HpyAV CCTTC 9 cut(s) 404, 532, 605, 855, 965, 1041, 1465, 1688, 1801
HpyCH4III ACNGT 6 cut(s) 211, 391, 1044, 1519, 1719, 1805
HpyCH4IV ACGT 1 cut(s) 1556
HpyF10VI GCNNNNNNNGC 7 cut(s) 262, 410, 539, 803, 1277, 1511, 1871
HpyF3I CTNAG 2 cut(s) 770, 792
HpySE526I ACGT 1 cut(s) 1556
Hsp92I GRCGYC 1 cut(s) 129
HspAI GCGC 1 cut(s) 226
KflI GGGWCCC 1 cut(s) 1825
Ksp22I TGATCA 1 cut(s) 997
Kzo9I GATC 7 cut(s) 17, 138, 247, 346, 751, 997, 1956
LguI GCTCTTC 1 cut(s) 1323
LmnI GCTCC 1 cut(s) 1310
Lsp1109I GCAGC 9 cut(s) 310, 416, 520, 523, 551, 1255, 1325, 1339, 1519
LweI GCATC 5 cut(s) 756, 1039, 1171, 1751, 1772
MabI ACCWGGT 1 cut(s) 1546
MaeI CTAG 4 cut(s) 755, 837, 962, 1963
MaeII ACGT 1 cut(s) 1556
MaeIII GTNAC 4 cut(s) 1222, 1446, 1685, 1713
MalI GATC 7 cut(s) 19, 140, 249, 348, 753, 999, 1958
MboI GATC 7 cut(s) 17, 138, 247, 346, 751, 997, 1956
MfeI CAATTG 1 cut(s) 313
MflI RGATCY 2 cut(s) 17, 138
MhlI GDGCHC 1 cut(s) 8
MlyI GAGTC 3 cut(s) 163, 879, 1731
MmeI TCCRAC 1 cut(s) 890
Mph1103I ATGCAT 1 cut(s) 1493
MroXI GAANNNNTTC 2 cut(s) 844, 954
MseI TTAA 3 cut(s) 273, 1092, 1109
MslI CAYNNNNRTG 3 cut(s) 1005, 1167, 1385
MspA1I CMGCKG 1 cut(s) 1532
MspI CCGG 1 cut(s) 1859
MspR9I CCNGG 5 cut(s) 870, 906, 1079, 1548, 1859
MunI CAATTG 1 cut(s) 313
MvaI CCWGG 4 cut(s) 870, 906, 1079, 1548
MvnI CGCG 1 cut(s) 1684
MwoI GCNNNNNNNGC 7 cut(s) 262, 410, 539, 803, 1277, 1511, 1871
NciI CCSGG 1 cut(s) 1859
NcoI CCATGG 1 cut(s) 1943
NdeI CATATG 2 cut(s) 1263, 1953
NdeII GATC 7 cut(s) 17, 138, 247, 346, 751, 997, 1956
NlaIV GGNNCC 3 cut(s) 216, 1826, 1827
NmuCI GTSAC 1 cut(s) 1222
NsiI ATGCAT 1 cut(s) 1493
NspI RCATGY 2 cut(s) 282, 422
PagI TCATGA 1 cut(s) 1000
PciI ACATGT 2 cut(s) 278, 418
PciSI GCTCTTC 1 cut(s) 1323
PdmI GAANNNNTTC 2 cut(s) 844, 954
PflFI GACNNNGTC 1 cut(s) 389
PfoI TCCNGGA 1 cut(s) 868
PleI GAGTC 3 cut(s) 163, 879, 1731
PpsI GAGTC 3 cut(s) 163, 879, 1731
PpuMI RGGWCCY 1 cut(s) 1825
PscI ACATGT 2 cut(s) 278, 418
Psp124BI GAGCTC 1 cut(s) 8
Psp5II RGGWCCY 1 cut(s) 1825
Psp6I CCWGG 4 cut(s) 868, 904, 1077, 1546
PspGI CCWGG 4 cut(s) 868, 904, 1077, 1546
PspN4I GGNNCC 3 cut(s) 216, 1826, 1827
PspPI GGNCC 1 cut(s) 1825
PspPPI RGGWCCY 1 cut(s) 1825
PstI CTGCAG 2 cut(s) 541, 1884
PsuI RGATCY 2 cut(s) 17, 138
PsyI GACNNNGTC 1 cut(s) 389
PvuII CAGCTG 1 cut(s) 1532
RsaI GTAC 4 cut(s) 674, 1368, 1545, 1555
RsaNI GTAC 4 cut(s) 673, 1367, 1544, 1554
RseI CAYNNNNRTG 3 cut(s) 1005, 1167, 1385
SacI GAGCTC 1 cut(s) 8
SapI GCTCTTC 1 cut(s) 1323
SaqAI TTAA 3 cut(s) 273, 1092, 1109
Sau3AI GATC 7 cut(s) 17, 138, 247, 346, 751, 997, 1956
Sau96I GGNCC 1 cut(s) 1825
SchI GAGTC 3 cut(s) 163, 879, 1731
ScrFI CCNGG 5 cut(s) 870, 906, 1079, 1548, 1859
SduI GDGCHC 1 cut(s) 8
SexAI ACCWGGT 1 cut(s) 1546
SfaNI GCATC 5 cut(s) 756, 1039, 1171, 1751, 1772
SfcI CTRYAG 3 cut(s) 537, 1758, 1880
SinI GGWCC 1 cut(s) 1825
SmiMI CAYNNNNRTG 3 cut(s) 1005, 1167, 1385
SmlI CTYRAG 3 cut(s) 145, 676, 988
SmoI CTYRAG 3 cut(s) 145, 676, 988
SpeI ACTAGT 1 cut(s) 961
SsiI CCGC 3 cut(s) 606, 636, 1502
SspMI CTAG 4 cut(s) 755, 837, 962, 1963
SstI GAGCTC 1 cut(s) 8
StyD4I CCNGG 5 cut(s) 868, 904, 1077, 1546, 1857
StyI CCWWGG 3 cut(s) 350, 684, 1943
TaaI ACNGT 6 cut(s) 211, 391, 1044, 1519, 1719, 1805
TaiI ACGT 1 cut(s) 1559
TaqI TCGA 6 cut(s) 14, 203, 250, 601, 735, 1959
TaqII GACCGA 1 cut(s) 723
TatI WGTACW 2 cut(s) 672, 1366
TauI GCSGC 2 cut(s) 638, 1505
Tru1I TTAA 3 cut(s) 273, 1092, 1109
Tru9I TTAA 3 cut(s) 273, 1092, 1109
TscAI CASTG 5 cut(s) 394, 501, 523, 1089, 1483
TseFI GTSAC 1 cut(s) 1222
TseI GCWGC 9 cut(s) 323, 404, 533, 536, 539, 1268, 1313, 1327, 1532
Tsp45I GTSAC 1 cut(s) 1222
TspRI CASTG 5 cut(s) 394, 501, 523, 1089, 1483
Tth111I GACNNNGTC 1 cut(s) 389
VpaK11BI GGWCC 1 cut(s) 1825
XapI RAATTY 3 cut(s) 333, 851, 1483
XceI RCATGY 2 cut(s) 282, 422
XcmI CCANNNNNNNNNTGG 2 cut(s) 225, 1110
XmiI GTMKAC 1 cut(s) 883
XmnI GAANNNNTTC 2 cut(s) 844, 954
XspI CTAG 4 cut(s) 755, 837, 962, 1963
Zsp2I ATGCAT 1 cut(s) 1493
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.