RchiOBHm_Chr5g0041401

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000157
Physical Location & Seq
Reverse (-)
36246748 .. 36248874
2127 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31984

Sequence Viewer

Length: 1749 bp
ATGTATAGTCTCCATATAAGCAACTTAATTAGTCTCCATATGATTAAACCCCAAACAGGAGAAGAATCCCGTAAGACACGTGTTGCCCTCTATAAGTATGCACTAAAAGGCGATTGGGAAGCCGCTGAACCTATCTTGAAAGAGAATAGCAAACTTCTGCAAGCAAGCATATCTAGAGGATATGAAACAGTCCTTCACGTTGCAGCAGGAACAAGCCATATTCACTTTGTGGAGAAACTGGTCGGCATGATGAAAGTAGAAGACTTGGCACTGCAGGATGAAAATGGAAACACTGCCTTATGCATTGCCGCTGCGGCTGGATCTCTAGAAATTGTCAAGATTTTGATAGAAAAGAACGAGTCTTTGCTAACAATTAGAGGCGGTAAAGATATGGCGCCAGCCTACATGGCTGCTGTGTTAGGACAGTCCGAAATGGCATGGTACCTGTACCACGTAAGTAAAAAGATGCTGGAGGAAACCGACCAAGAAAACTTGTTATTTTCTTGCATCAACAATTGTTTGTACGATTTGGCCTTTCAGTTGCTAGATGCTAATAAAGCATTAGCGAAGGCACGTACTAGCTCGCAGAAAAATAAAACGGCCTTGCATATCCTGGCTCGAAAACCTTCAGCATTTGGTGGCAGCCAAAGTCCACGAATGTGGACTAGACTCATTAACTCATTCCTCCCAGGTTTCAAGTTCTCATACAAAAGAAAGTTGAGAGAAGCTGATGGAGCCCTTCAACTAGTCCACTGCCTCTGGGAAGAAGTCTTGAGAGATGATAACCATGATGACGTGATGGAGCTGATCAACTATCCTTCAAATTTATTATTTGACGCAGCAGAATTAGGAAATTATGAGTTTTTGGCAGCGCTTCTGAGCTCTTATCCTGAGTTAGTATGGGAAACTGATGAAAAAAATCGAACCATAATCCATGTCGCAGTTCTGCATCGTCATGCGAGTATTTTCAATCTAGTGCATGAAATAGGCTCAATCAAAGATGTCATCGTGACATATGTAGATAAGGAGGGTAACAACATTGTGCATATGGCTGCAAACTTAGCACCTCAAAATCAATTGAATCTTGTGTCAGGCGTAGCTCTTCAAATGCATCGAGAGTTGGTATGGTTTGAGGAAGTCAAAAAGATCGTCCAACCACAATACATTGAGATGGAAAACGACGAAGGAAAAACACCTCAAGAATTATTTACTAAAGAGCATACGGCGTTAATGCGTCAAGGAGAAAAATGGATGAAGGACACTGCAACTTCATGCATGCTCGTTGCGACTATTATCGCAACCGTTGTGTTCTCAGCTGCATTTAGCATACCGGGTGGCTCTGATGATCATACTGGAAAGCCAAATCTTTTGAAACAGAAAGCCTTTCTAGACTTTACCATAGCTGACGAAGTAGCACTCTTTTCGTCTTCAACTGCAATGTTGATGTTCTTGTTCATCCTTACCTCGCGCTATGCAGAAAATGATTTCCGCAAGTCCTTACCCTTGAAGTTGATGGTAGGACTCACATGCCTCTTCATATCTATAGCGTCGATGATGATGGCTTTCAGCACCGCCTTCTATCTATCTTGTCAATACGAATCAAGATGGATTTCAAATTTTACATTTTTATTTGCATTTGTCCCAGTTGCTTTGTTTGCATTTATGCAATTCCCTCTTGTGTCCGACATGTCCTCGTCTATATTTTGCTCAAGTCTACTATTTCAGCCGTGGAAACACATGCTCTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

582

Amino Acids

65.68

Weight (kDa)

6.08

Isoelectric Point (pI)

42.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 37 - 119 1.4e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 65 - 151 2.7e-10 Ankyrin repeats (3 copies)
PGG PF13962 415 - 528 2.4e-27 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 441
AccB1I GGYRCC 2 cut(s) 394, 441
AccI GTMKAC 1 cut(s) 1714
AccII CGCG 1 cut(s) 1468
AciI CCGC 6 cut(s) 123, 309, 314, 381, 1489, 1572
AclWI GGATC 1 cut(s) 328
AcsI RAATTY 2 cut(s) 823, 1615
AcuI CTGAAG 1 cut(s) 612
AcvI CACGTG 1 cut(s) 80
AcyI GRCGYC 1 cut(s) 395
AdeI CACNNNGTG 1 cut(s) 229
AfaI GTAC 4 cut(s) 443, 449, 524, 577
AfeI AGCGCT 1 cut(s) 873
AfiI CCNNNNNNNGG 1 cut(s) 56
AflIII ACRYGT 3 cut(s) 77, 79, 1686
AhlI ACTAGT 1 cut(s) 745
AjiI CACGTC 1 cut(s) 796
AjnI CCWGG 2 cut(s) 612, 688
AleI CACNNNNGTG 1 cut(s) 658
AluBI AGCT 7 cut(s) 582, 728, 805, 882, 1100, 1316, 1403
AluI AGCT 7 cut(s) 582, 728, 805, 882, 1100, 1316, 1403
Alw21I GWGCWC 1 cut(s) 884
Alw26I GTCTC 2 cut(s) 14, 38
AlwI GGATC 1 cut(s) 328
Aor51HI AGCGCT 1 cut(s) 873
AoxI GGCC 2 cut(s) 531, 600
ApeKI GCWGC 8 cut(s) 203, 311, 410, 642, 839, 869, 1052, 1316
ApoI RAATTY 2 cut(s) 823, 1615
ArsI GACNNNNNNTTYG 2 cut(s) 1134, 1166
Asp700I GAANNNNTTC 1 cut(s) 625
Asp718I GGTACC 1 cut(s) 441
AspLEI GCGC 3 cut(s) 397, 874, 1470
AsuC2I CCSGG 1 cut(s) 1332
BanI GGYRCC 2 cut(s) 394, 441
BanII GRGCYC 2 cut(s) 739, 884
BbrPI CACGTG 1 cut(s) 80
BbsI GAAGAC 2 cut(s) 267, 1419
Bbv12I GWGCWC 1 cut(s) 884
BbvI GCAGC 8 cut(s) 215, 298, 397, 654, 851, 881, 1039, 1303
BccI CCATC 6 cut(s) 725, 793, 1165, 1507, 1552, 1599
BceAI ACGGC 3 cut(s) 615, 1239, 1711
BcgI CGANNNNNNTGC 2 cut(s) 1404, 1438
BciT130I CCWGG 2 cut(s) 614, 690
BclI TGATCA 2 cut(s) 807, 1345
BcnI CCSGG 1 cut(s) 1332
BcoDI GTCTC 2 cut(s) 14, 38
BcuI ACTAGT 1 cut(s) 745
BfaI CTAG 8 cut(s) 174, 326, 545, 579, 666, 746, 974, 1388
BfmI CTRYAG 2 cut(s) 272, 1542
BfoI RGCGCY 2 cut(s) 398, 875
BglI GCCNNNNNGGC 2 cut(s) 314, 407
Bme1390I CCNGG 3 cut(s) 614, 690, 1332
BmgBI CACGTC 1 cut(s) 796
BmiI GGNNCC 3 cut(s) 396, 443, 736
BmrFI CCNGG 3 cut(s) 614, 690, 1332
BmrI ACTGGG 1 cut(s) 1637
BmsI GCATC 5 cut(s) 456, 516, 538, 958, 1120
BmuI ACTGGG 1 cut(s) 1637
BpiI GAAGAC 2 cut(s) 267, 1419
BpmI CTGGAG 1 cut(s) 491
BpuEI CTTGAG 3 cut(s) 793, 1182, 1693
BpuMI CCSGG 1 cut(s) 1332
BsaAI YACGTR 3 cut(s) 80, 454, 575
BsaHI GRCGYC 1 cut(s) 395
BsaJI CCNNGG 2 cut(s) 688, 1727
Bsc4I CCNNNNNNNGG 1 cut(s) 56
Bse1I ACTGG 3 cut(s) 243, 1357, 1643
Bse3DI GCAATG 2 cut(s) 303, 1443
BseBI CCWGG 2 cut(s) 614, 690
BseDI CCNNGG 2 cut(s) 688, 1727
BseGI GGATG 3 cut(s) 283, 1257, 1455
BseLI CCNNNNNNNGG 1 cut(s) 56
BseMI GCAATG 2 cut(s) 303, 1443
BseMII CTCAG 3 cut(s) 869, 882, 1326
BseNI ACTGG 3 cut(s) 243, 1357, 1643
BseXI GCAGC 8 cut(s) 215, 298, 397, 654, 851, 881, 1039, 1303
Bsh1236I CGCG 1 cut(s) 1468
BshFI GGCC 2 cut(s) 533, 602
BshNI GGYRCC 2 cut(s) 394, 441
BsiHKAI GWGCWC 1 cut(s) 884
BsiSI CCGG 1 cut(s) 1331
BslFI GGGAC 1 cut(s) 1625
BslI CCNNNNNNNGG 1 cut(s) 56
BsmAI GTCTC 2 cut(s) 14, 38
BsmFI GGGAC 1 cut(s) 1625
BsnI GGCC 2 cut(s) 533, 602
Bsp1286I GDGCHC 2 cut(s) 739, 884
Bsp143I GATC 4 cut(s) 320, 807, 1146, 1345
BspACI CCGC 6 cut(s) 123, 309, 314, 381, 1489, 1572
BspANI GGCC 2 cut(s) 533, 602
BspCNI CTCAG 3 cut(s) 870, 883, 1325
BspFNI CGCG 1 cut(s) 1468
BspLI GGNNCC 3 cut(s) 396, 443, 736
BspMAI CTGCAG 1 cut(s) 276
BspPI GGATC 1 cut(s) 328
BspQI GCTCTTC 1 cut(s) 1107
BspT107I GGYRCC 2 cut(s) 394, 441
BsrDI GCAATG 2 cut(s) 303, 1443
BsrI ACTGG 3 cut(s) 243, 1357, 1643
BssECI CCNNGG 2 cut(s) 688, 1727
BssMI GATC 4 cut(s) 320, 807, 1146, 1345
BssNI GRCGYC 1 cut(s) 395
Bst2UI CCWGG 2 cut(s) 614, 690
Bst4CI ACNGT 3 cut(s) 190, 426, 1303
Bst6I CTCTTC 2 cut(s) 1107, 1538
BstACI GRCGYC 1 cut(s) 395
BstBAI YACGTR 3 cut(s) 80, 454, 575
BstC8I GCNNGC 5 cut(s) 162, 166, 399, 584, 1277
BstDEI CTNAG 4 cut(s) 878, 891, 1060, 1312
BstDSI CCRYGG 1 cut(s) 1727
BstF5I GGATG 3 cut(s) 283, 1257, 1455
BstFNI CGCG 1 cut(s) 1468
BstH2I RGCGCY 2 cut(s) 398, 875
BstHHI GCGC 3 cut(s) 397, 874, 1470
BstKTI GATC 4 cut(s) 323, 810, 1149, 1348
BstMAI GTCTC 2 cut(s) 14, 38
BstMBI GATC 4 cut(s) 320, 807, 1146, 1345
BstMWI GCNNNNNNNGC 6 cut(s) 314, 407, 557, 734, 1061, 1655
BstNI CCWGG 2 cut(s) 614, 690
BstNSI RCATGY 4 cut(s) 1279, 1530, 1690, 1741
BstSCI CCNGG 3 cut(s) 612, 688, 1330
BstSFI CTRYAG 2 cut(s) 272, 1542
BstUI CGCG 1 cut(s) 1468
BstV1I GCAGC 8 cut(s) 215, 298, 397, 654, 851, 881, 1039, 1303
BstV2I GAAGAC 2 cut(s) 267, 1419
BstX2I RGATCY 1 cut(s) 320
BstXI CCANNNNNNTGG 1 cut(s) 660
BstYI RGATCY 1 cut(s) 320
BsuRI GGCC 2 cut(s) 533, 602
BtgI CCRYGG 1 cut(s) 1727
BtrI CACGTC 1 cut(s) 796
BtsCI GGATG 3 cut(s) 283, 1257, 1455
BtsI GCAGTG 4 cut(s) 269, 291, 751, 1260
BtsIMutI CAGTG 4 cut(s) 269, 291, 751, 1260
Cac8I GCNNGC 5 cut(s) 162, 166, 399, 584, 1277
CfoI GCGC 3 cut(s) 397, 874, 1470
CseI GACGC 3 cut(s) 845, 1223, 1536
Csp6I GTAC 4 cut(s) 442, 448, 523, 576
CviQI GTAC 4 cut(s) 442, 448, 523, 576
DdeI CTNAG 4 cut(s) 878, 891, 1060, 1312
DinI GGCGCC 1 cut(s) 396
DpnI GATC 4 cut(s) 322, 809, 1148, 1347
DpnII GATC 4 cut(s) 320, 807, 1146, 1345
DraIII CACNNNGTG 1 cut(s) 229
Eam1104I CTCTTC 2 cut(s) 1107, 1538
EarI CTCTTC 2 cut(s) 1107, 1538
Ecl136II GAGCTC 1 cut(s) 882
Eco24I GRGCYC 2 cut(s) 739, 884
Eco47III AGCGCT 1 cut(s) 873
Eco53kI GAGCTC 1 cut(s) 882
Eco57I CTGAAG 1 cut(s) 612
Eco72I CACGTG 1 cut(s) 80
EcoICRI GAGCTC 1 cut(s) 882
EcoRII CCWGG 2 cut(s) 612, 688
EcoT22I ATGCAT 3 cut(s) 305, 1113, 1277
EcoT38I GRGCYC 2 cut(s) 739, 884
EgeI GGCGCC 1 cut(s) 396
EheI GGCGCC 1 cut(s) 396
FaqI GGGAC 1 cut(s) 1625
FauNDI CATATG 3 cut(s) 39, 1015, 1047
FbaI TGATCA 2 cut(s) 807, 1345
FblI GTMKAC 1 cut(s) 1714
FokI GGATG 3 cut(s) 290, 1264, 1442
FriOI GRGCYC 2 cut(s) 739, 884
FspBI CTAG 8 cut(s) 174, 326, 545, 579, 666, 746, 974, 1388
GlaI GCGC 3 cut(s) 396, 873, 1469
GsuI CTGGAG 1 cut(s) 491
HaeII RGCGCY 2 cut(s) 398, 875
HaeIII GGCC 2 cut(s) 533, 602
HapII CCGG 1 cut(s) 1331
HgaI GACGC 3 cut(s) 845, 1223, 1536
HhaI GCGC 3 cut(s) 397, 874, 1470
Hin1I GRCGYC 1 cut(s) 395
Hin6I GCGC 3 cut(s) 395, 872, 1468
HinP1I GCGC 3 cut(s) 395, 872, 1468
HinfI GANTC 6 cut(s) 65, 359, 669, 1081, 1521, 1598
HpaII CCGG 1 cut(s) 1331
Hpy166II GTNNAC 4 cut(s) 653, 663, 751, 1715
Hpy188I TCNGA 4 cut(s) 430, 879, 1342, 1684
Hpy8I GTNNAC 4 cut(s) 653, 663, 751, 1715
Hpy99I CGWCG 2 cut(s) 1184, 1552
HpyAV CCTTC 8 cut(s) 203, 562, 636, 749, 828, 1178, 1249, 1585
HpyCH4III ACNGT 3 cut(s) 190, 426, 1303
HpyCH4IV ACGT 5 cut(s) 79, 198, 453, 574, 795
HpyF10VI GCNNNNNNNGC 6 cut(s) 314, 407, 557, 734, 1061, 1655
HpyF3I CTNAG 4 cut(s) 878, 891, 1060, 1312
HpySE526I ACGT 5 cut(s) 79, 198, 453, 574, 795
Hsp92I GRCGYC 1 cut(s) 395
HspAI GCGC 3 cut(s) 395, 872, 1468
KasI GGCGCC 1 cut(s) 394
KpnI GGTACC 1 cut(s) 445
Ksp22I TGATCA 2 cut(s) 807, 1345
Kzo9I GATC 4 cut(s) 320, 807, 1146, 1345
LguI GCTCTTC 1 cut(s) 1107
LmnI GCTCC 2 cut(s) 734, 802
Lsp1109I GCAGC 8 cut(s) 215, 298, 397, 654, 851, 881, 1039, 1303
LweI GCATC 5 cut(s) 456, 516, 538, 958, 1120
MaeI CTAG 8 cut(s) 174, 326, 545, 579, 666, 746, 974, 1388
MaeII ACGT 5 cut(s) 79, 198, 453, 574, 795
MaeIII GTNAC 2 cut(s) 1009, 1031
MalI GATC 4 cut(s) 322, 809, 1148, 1347
MboI GATC 4 cut(s) 320, 807, 1146, 1345
MboII GAAGA 6 cut(s) 74, 272, 776, 1094, 1419, 1525
MfeI CAATTG 2 cut(s) 514, 1076
MflI RGATCY 1 cut(s) 320
MhlI GDGCHC 2 cut(s) 739, 884
Mly113I GGCGCC 1 cut(s) 395
MlyI GAGTC 3 cut(s) 368, 663, 1515
MmeI TCCRAC 2 cut(s) 1177, 1707
Mph1103I ATGCAT 3 cut(s) 305, 1113, 1277
MroXI GAANNNNTTC 1 cut(s) 625
MseI TTAA 4 cut(s) 26, 45, 675, 1229
MslI CAYNNNNRTG 3 cut(s) 658, 954, 1169
MspA1I CMGCKG 3 cut(s) 125, 311, 1316
MspI CCGG 1 cut(s) 1331
MspR9I CCNGG 3 cut(s) 614, 690, 1332
MunI CAATTG 2 cut(s) 514, 1076
MvaI CCWGG 2 cut(s) 614, 690
MvnI CGCG 1 cut(s) 1468
MwoI GCNNNNNNNGC 6 cut(s) 314, 407, 557, 734, 1061, 1655
NarI GGCGCC 1 cut(s) 395
NciI CCSGG 1 cut(s) 1332
NdeI CATATG 3 cut(s) 39, 1015, 1047
NdeII GATC 4 cut(s) 320, 807, 1146, 1345
NlaIV GGNNCC 3 cut(s) 396, 443, 736
NmuCI GTSAC 1 cut(s) 1009
NsiI ATGCAT 3 cut(s) 305, 1113, 1277
NspI RCATGY 4 cut(s) 1279, 1530, 1690, 1741
OliI CACNNNNGTG 1 cut(s) 658
PaeI GCATGC 1 cut(s) 1279
PciI ACATGT 1 cut(s) 1686
PciSI GCTCTTC 1 cut(s) 1107
PdmI GAANNNNTTC 1 cut(s) 625
PfeI GAWTC 3 cut(s) 65, 1081, 1598
PleI GAGTC 3 cut(s) 367, 663, 1515
PluTI GGCGCC 1 cut(s) 398
PmaCI CACGTG 1 cut(s) 80
PmlI CACGTG 1 cut(s) 80
PpsI GAGTC 3 cut(s) 367, 663, 1515
Ppu21I YACGTR 3 cut(s) 80, 454, 575
PscI ACATGT 1 cut(s) 1686
Psp124BI GAGCTC 1 cut(s) 884
Psp6I CCWGG 2 cut(s) 612, 688
PspCI CACGTG 1 cut(s) 80
PspGI CCWGG 2 cut(s) 612, 688
PspN4I GGNNCC 3 cut(s) 396, 443, 736
PstI CTGCAG 1 cut(s) 276
PsuI RGATCY 1 cut(s) 320
PvuII CAGCTG 1 cut(s) 1316
RsaI GTAC 4 cut(s) 443, 449, 524, 577
RsaNI GTAC 4 cut(s) 442, 448, 523, 576
RseI CAYNNNNRTG 3 cut(s) 658, 954, 1169
SacI GAGCTC 1 cut(s) 884
SapI GCTCTTC 1 cut(s) 1107
SaqAI TTAA 4 cut(s) 26, 45, 675, 1229
Sau3AI GATC 4 cut(s) 320, 807, 1146, 1345
SchI GAGTC 3 cut(s) 368, 663, 1515
ScrFI CCNGG 3 cut(s) 614, 690, 1332
SduI GDGCHC 2 cut(s) 739, 884
SfaNI GCATC 5 cut(s) 456, 516, 538, 958, 1120
SfcI CTRYAG 2 cut(s) 272, 1542
SfoI GGCGCC 1 cut(s) 396
SmiMI CAYNNNNRTG 3 cut(s) 658, 954, 1169
SmlI CTYRAG 3 cut(s) 772, 1197, 1708
SmoI CTYRAG 3 cut(s) 772, 1197, 1708
SpeI ACTAGT 1 cut(s) 745
SphI GCATGC 1 cut(s) 1279
SsiI CCGC 6 cut(s) 123, 309, 314, 381, 1489, 1572
SspDI GGCGCC 1 cut(s) 394
SspMI CTAG 8 cut(s) 174, 326, 545, 579, 666, 746, 974, 1388
SstI GAGCTC 1 cut(s) 884
StyD4I CCNGG 3 cut(s) 612, 688, 1330
TaaI ACNGT 3 cut(s) 190, 426, 1303
TaiI ACGT 5 cut(s) 82, 201, 456, 577, 798
TaqI TCGA 4 cut(s) 619, 922, 1114, 1550
TauI GCSGC 3 cut(s) 125, 311, 317
TfiI GAWTC 3 cut(s) 65, 1081, 1598
Tru1I TTAA 4 cut(s) 26, 45, 675, 1229
Tru9I TTAA 4 cut(s) 26, 45, 675, 1229
TscAI CASTG 4 cut(s) 276, 298, 758, 1267
TseFI GTSAC 1 cut(s) 1009
TseI GCWGC 8 cut(s) 203, 311, 410, 642, 839, 869, 1052, 1316
Tsp45I GTSAC 1 cut(s) 1009
TspDTI ATGAA 9 cut(s) 198, 266, 294, 927, 996, 1260, 1268, 1444, 1525
TspRI CASTG 4 cut(s) 276, 298, 758, 1267
XapI RAATTY 2 cut(s) 823, 1615
XbaI TCTAGA 3 cut(s) 173, 325, 1387
XceI RCATGY 4 cut(s) 1279, 1530, 1690, 1741
XmiI GTMKAC 1 cut(s) 1714
XmnI GAANNNNTTC 1 cut(s) 625
XspI CTAG 8 cut(s) 174, 326, 545, 579, 666, 746, 974, 1388
Zsp2I ATGCAT 3 cut(s) 305, 1113, 1277
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.