FvH4_3g25070

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000157
Physical Location & Seq
Reverse (-)
18109651 .. 18115411
5761 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g25070.t1

Sequence Viewer

Length: 2451 bp
ATGGCTAACCCACAAGCACAAAAGATATCACCTGCCGGGATTCAATTGTCCACGGGTAACTGCGATTCAGCAACTGGGATATACAACCAATCAGCACACATCGCCGTCGACATGTCGACTGATTCGGCTCAACCTAACAGACCTTTGTCTTATCTACTAGAACATGCAAATAGAGAAGAGTACCTTAAGACATGTGTTCCCCTCTACAAGTATGCACTAAAGGGCGATTGGGAAGATGCAGAACGAATCTTGAAAAGGGACAGGAATCTTCTGAGAGCTAGCATATCTAGAGGATATGAAACAGTCCTTCATGTTGCAGCAGGAGCAAGACGTGTTCACTTTGTGGAGAAACTGATCAGCATGATGGACGAAGAAGATTTGGCACTGCAGGACGTAAATGGAAACACTGCCTTATGTATTGCTGCCGCGGCTGGATCTCTAGACATTGTCCAGATTTTGTTACAGGAGAACAAGTCTTTACTATCGATTCGAGGCGGTAAAGATATGACACCAACCTATATAGCTGTCGTGTTCGGACAGTCGGAAATTGCATGGCACCTGTACAAGTACCCTGGAAGTGACAAGATGTTGGAGAAAACAGACCGCGAAAACTTGTTCTTTTCTTCCATCAGCAATGGTTTGTATGATTTGGCCTTAGAGTTGCTGAATGATGATAGAACATTAGCAACAGCACGTACTGCATCGCAGAAATATAAAACGGCCTTGCATATATTGGCACGAAGGCCTTCGGCATTTGGTGGCAGCCAAAGTCCAGGAATGTGGAGTAGACTCATTAAATCATGTTTGATGAAGTTTTCTTGCAAAGGAAAGTTAAATCAAGCTGATGAAGCACTTCAGCTGGTCCAACGCCTTTGGGAAGAAATTTTGAAAGATGAGCATGAAGACGTGATGAGGCTGATCAAATATCCTACAAATTTATTATTTGACGCTGCGGAATTAGGGAATCATGAGTTCCTGGCAGAGCTTATGAGCTCATATCCTGAGTTAGTATGGGAAACTGATGACAGAAATAGAACCATAATCCATGTCGCAGTTCTGCATCGTCATGCAAGTATCTTCAATCTAGTGCATGAAATAGGCTCAATCAAAGACGTCATAGTAACATTTGCTGATGATCAGGGTAACAACATTGTGCATATGGCTGCAAAATTGGCACCTCAAAATCAATTAAATCTCGTGTCAGGCGTAGCTCTTCAAATGCATCGAGAGTTGGTATGGTTTGAGGAAGTCAAAAGAATTGTTCAACCTCAGTACATAGAGATGGAAAACCAGCAAGGAAAAACACCTCAAGAACTATTCACAAAGGAGCATAGGGCGCTAATGCGTCAAGGAGAATCATGGATGAAGGACACTGCAGCTTCATGCTTGCTCGTTGCGACTATTATTGCAACTGTAGTGTTTTCAGCTGCGTTTAGCATACCGGGTGGCACAGATGATCATACCGGAAAGCCGAATTTCTTCAAAGCAAAAATGTTCTTATACTTCACCATAGCCGACGGACTAGCACTCTTTTCGTCTTCAACTGCAATGCTGATGTTCTTGTTCATACTGACCTCACGGTATGCAGAAAACGATTTTCTCAACTCCTTACCGCTGAAGTTGATGATAGGACTCACTTCCCTGTTCATCTCTATCGCATCGATGATGATGGCTTTCAGCACCGCCTTCTATTTGTCGTGTCAATATGAATCAAGATGGCTTTCAGAATTTACATTTTTATTTGCACTTGTCCCAGTTGCTTTGTTTGGGTTTATGCAATTCCCTCTCGAAGAGGAGGAAGAGGAGATAGAGGAGGAGCTTGCAGATGTGACCTTTGGGGATTTGCAGAAGGCGCGATCCAACGGCTCGCATGTCTTGTTGCCTCCTCACCCTAAAAATGACAAGAAGAAGGCTGCCCGAGCTAACAAGAACCGGCCGATGGAGGTGAGTAGCAAGAAGCCTGTCAGTAGATTCAGGGAGGTCATCCAAGCGCCCAAAAAGGTGGTACGTGATCCGCGTTTTGAATCTTTATGTGGAACACTGAATGTTGATGGGTTTAGGAAGAGATATGATTTTTTGTTTTCAAACGAGCTTCCAGCTGAAAAGGAGGATCTAAAGAAACAATTGAAGACATCTAAGGACCCAGAAGTCATTGAAGATCTAAAGAAGCGCATATCTTGGATTGATAAACAGCTAAAATCTGATTCGTCTAAGCGTACTGAAGCTGAAATTCTAGCAGAGCACAAGAAAAAAGAGAGAGAAAAAGCAAAGCAAGGGAAACAACCCTTCTTTATCAAAAAATCTGATATCCGGAAGAAACGACTTATTGAAAAGTATACAAATCTCAAGGGATCTGGCAAACTTGATAACTTCTTGGAGCAAAGGCGAAAGAAGAATGCTTCAAAGGACCACAGATACATGCCGTACCGTAGACCTGACAACATTGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

817

Amino Acids

92.91

Weight (kDa)

8.55

Isoelectric Point (pI)

48.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 83 - 157 1.7e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 103 - 196 2.3e-10 Ankyrin repeats (3 copies)
PGG PF13962 453 - 565 1.1e-23 Domain of unknown function
RRP36 PF06102 640 - 805 1.1e-52 rRNA biogenesis protein RRP36
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 40
AasI GACNNNNNNGTC 1 cut(s) 2147
AatII GACGTC 1 cut(s) 1116
Acc36I ACCTGC 1 cut(s) 40
AccB1I GGYRCC 2 cut(s) 555, 1174
AccI GTMKAC 5 cut(s) 108, 116, 787, 2336, 2431
AccII CGCG 4 cut(s) 428, 606, 1855, 2017
AccIII TCCGGA 1 cut(s) 2310
AciI CCGC 8 cut(s) 426, 428, 495, 604, 953, 1613, 1683, 2015
AclWI GGATC 5 cut(s) 442, 1851, 2006, 2118, 2359
AcoI YGGCCR 1 cut(s) 1934
AcsI RAATTY 5 cut(s) 882, 934, 1474, 1727, 2229
AcuI CTGAAG 3 cut(s) 839, 1637, 2241
AcyI GRCGYC 1 cut(s) 1113
AdeI CACNNNGTG 1 cut(s) 343
AfaI GTAC 8 cut(s) 182, 563, 569, 697, 1274, 2007, 2218, 2426
AfiI CCNNNNNNNGG 1 cut(s) 1939
AflII CTTAAG 1 cut(s) 185
AflIII ACRYGT 3 cut(s) 111, 191, 331
AjiI CACGTC 2 cut(s) 332, 907
AjnI CCWGG 3 cut(s) 571, 772, 975
Alw21I GWGCWC 2 cut(s) 995, 2244
AlwI GGATC 5 cut(s) 442, 1851, 2006, 2118, 2359
AlwNI CAGNNNCTG 1 cut(s) 74
Ama87I CYCGRG 1 cut(s) 1917
Aor13HI TCCGGA 1 cut(s) 2310
AoxI GGCC 4 cut(s) 651, 720, 743, 1934
ApeKI GCWGC 8 cut(s) 317, 422, 762, 950, 1163, 1376, 1427, 1913
ApoI RAATTY 5 cut(s) 882, 934, 1474, 1727, 2229
Asp700I GAANNNNTTC 3 cut(s) 745, 852, 1478
AspLEI GCGC 4 cut(s) 1339, 1855, 1993, 2172
AspS9I GGNCC 3 cut(s) 862, 2140, 2407
AsuC2I CCSGG 2 cut(s) 37, 1443
AsuHPI GGTGA 4 cut(s) 21, 1498, 1880, 1957
AsuNHI GCTAGC 1 cut(s) 278
AvaI CYCGRG 1 cut(s) 1917
AvaII GGWCC 3 cut(s) 862, 2140, 2407
BanI GGYRCC 2 cut(s) 555, 1174
BanII GRGCYC 1 cut(s) 995
BauI CACGAG 1 cut(s) 1196
BbsI GAAGAC 3 cut(s) 909, 1530, 2135
Bbv12I GWGCWC 2 cut(s) 995, 2244
BbvI GCAGC 8 cut(s) 329, 409, 774, 937, 1150, 1388, 1414, 1900
BccI CCATC 7 cut(s) 358, 635, 1276, 1663, 1710, 1933, 2045
BceAI ACGGC 4 cut(s) 89, 735, 1879, 2407
BcgI CGANNNNNNTGC 2 cut(s) 1515, 1549
BciT130I CCWGG 3 cut(s) 573, 774, 977
BclI TGATCA 4 cut(s) 354, 918, 1135, 1456
BcnI CCSGG 2 cut(s) 37, 1443
BfaI CTAG 7 cut(s) 158, 279, 288, 440, 1085, 1523, 2234
BfmI CTRYAG 3 cut(s) 386, 1374, 1413
BfoI RGCGCY 2 cut(s) 1340, 1994
BfrI CTTAAG 1 cut(s) 185
BfuAI ACCTGC 1 cut(s) 40
BglII AGATCT 1 cut(s) 2158
Bme1390I CCNGG 5 cut(s) 37, 573, 774, 977, 1443
Bme18I GGWCC 3 cut(s) 862, 2140, 2407
BmeT110I CYCGRG 1 cut(s) 1917
BmgBI CACGTC 2 cut(s) 332, 907
BmgT120I GGNCC 3 cut(s) 862, 2140, 2407
BmiI GGNNCC 3 cut(s) 557, 1176, 2142
BmrFI CCNGG 5 cut(s) 37, 573, 774, 977, 1443
BmrI ACTGGG 2 cut(s) 84, 1748
BmsI GCATC 5 cut(s) 226, 710, 1069, 1231, 1667
BmtI GCTAGC 1 cut(s) 282
BmuI ACTGGG 2 cut(s) 84, 1748
BoxI GACNNNNGTC 1 cut(s) 145
BpiI GAAGAC 3 cut(s) 909, 1530, 2135
BpuEI CTTGAG 2 cut(s) 1293, 2330
BpuMI CCSGG 2 cut(s) 37, 1443
Bsa29I ATCGAT 2 cut(s) 485, 1661
BsaAI YACGTR 2 cut(s) 695, 2009
BsaHI GRCGYC 1 cut(s) 1113
BsaJI CCNNGG 3 cut(s) 51, 426, 571
BsaWI WCCGGW 2 cut(s) 1463, 2310
BsaXI ACNNNNNCTCC 2 cut(s) 458, 488
Bsc4I CCNNNNNNNGG 1 cut(s) 1939
Bse118I RCCGGY 1 cut(s) 1932
Bse1I ACTGG 2 cut(s) 79, 1754
Bse3DI GCAATG 2 cut(s) 640, 1554
BseAI TCCGGA 1 cut(s) 2310
BseBI CCWGG 3 cut(s) 573, 774, 977
BseCI ATCGAT 2 cut(s) 485, 1661
BseDI CCNNGG 3 cut(s) 51, 426, 571
BseGI GGATG 2 cut(s) 1368, 1983
BseLI CCNNNNNNNGG 1 cut(s) 1939
BseMI GCAATG 2 cut(s) 640, 1554
BseMII CTCAG 3 cut(s) 263, 993, 1283
BseNI ACTGG 2 cut(s) 79, 1754
BseRI GAGGAG 5 cut(s) 1808, 1817, 1826, 1829, 1875
BseX3I CGGCCG 1 cut(s) 1934
BseXI GCAGC 8 cut(s) 329, 409, 774, 937, 1150, 1388, 1414, 1900
Bsh1236I CGCG 4 cut(s) 428, 606, 1855, 2017
Bsh1285I CGRYCG 1 cut(s) 1937
BshFI GGCC 4 cut(s) 653, 722, 745, 1936
BshNI GGYRCC 2 cut(s) 555, 1174
BshVI ATCGAT 2 cut(s) 485, 1661
BsiEI CGRYCG 1 cut(s) 1937
BsiHKAI GWGCWC 2 cut(s) 995, 2244
BsiHKCI CYCGRG 1 cut(s) 1917
BsiSI CCGG 5 cut(s) 36, 1442, 1464, 1933, 2311
BslFI GGGAC 2 cut(s) 272, 1736
BslI CCNNNNNNNGG 1 cut(s) 1939
BsmFI GGGAC 2 cut(s) 272, 1736
BsmI GAATGC 1 cut(s) 2401
BsnI GGCC 4 cut(s) 653, 722, 745, 1936
BsoBI CYCGRG 1 cut(s) 1917
Bsp1286I GDGCHC 2 cut(s) 995, 2244
Bsp13I TCCGGA 1 cut(s) 2310
Bsp1407I TGTACA 1 cut(s) 561
BspACI CCGC 8 cut(s) 426, 428, 495, 604, 953, 1613, 1683, 2015
BspANI GGCC 4 cut(s) 653, 722, 745, 1936
BspCNI CTCAG 3 cut(s) 264, 994, 1282
BspDI ATCGAT 2 cut(s) 485, 1661
BspEI TCCGGA 1 cut(s) 2310
BspFNI CGCG 4 cut(s) 428, 606, 1855, 2017
BspHI TCATGA 1 cut(s) 967
BspLI GGNNCC 3 cut(s) 557, 1176, 2142
BspMAI CTGCAG 2 cut(s) 390, 1378
BspMI ACCTGC 1 cut(s) 40
BspOI GCTAGC 1 cut(s) 282
BspPI GGATC 5 cut(s) 442, 1851, 2006, 2118, 2359
BspQI GCTCTTC 1 cut(s) 1218
BspT107I GGYRCC 2 cut(s) 555, 1174
BspTI CTTAAG 1 cut(s) 185
BsrDI GCAATG 2 cut(s) 640, 1554
BsrFI RCCGGY 1 cut(s) 1932
BsrGI TGTACA 1 cut(s) 561
BsrI ACTGG 2 cut(s) 79, 1754
BssAI RCCGGY 1 cut(s) 1932
BssECI CCNNGG 3 cut(s) 51, 426, 571
BssNAI GTATAC 1 cut(s) 2337
BssNI GRCGYC 1 cut(s) 1113
BssSI CACGAG 1 cut(s) 1196
Bst1107I GTATAC 1 cut(s) 2337
Bst2BI CACGAG 1 cut(s) 1196
Bst2UI CCWGG 3 cut(s) 573, 774, 977
Bst4CI ACNGT 5 cut(s) 304, 540, 1414, 1581, 2429
Bst6I CTCTTC 5 cut(s) 171, 1218, 1785, 1794, 2057
BstACI GRCGYC 1 cut(s) 1113
BstAFI CTTAAG 1 cut(s) 185
BstAPI GCANNNNNTGC 1 cut(s) 698
BstAUI TGTACA 1 cut(s) 561
BstBAI YACGTR 2 cut(s) 695, 2009
BstC8I GCNNGC 4 cut(s) 280, 1388, 1821, 1868
BstDEI CTNAG 6 cut(s) 272, 655, 1002, 1269, 2136, 2211
BstDSI CCRYGG 2 cut(s) 51, 426
BstF5I GGATG 2 cut(s) 1368, 1983
BstFNI CGCG 4 cut(s) 428, 606, 1855, 2017
BstH2I RGCGCY 2 cut(s) 1340, 1994
BstHHI GCGC 4 cut(s) 1339, 1855, 1993, 2172
BstMCI CGRYCG 1 cut(s) 1937
BstMWI GCNNNNNNNGC 9 cut(s) 101, 323, 428, 698, 848, 1172, 1336, 1852, 1919
BstNI CCWGG 3 cut(s) 573, 774, 977
BstNSI RCATGY 5 cut(s) 115, 167, 195, 1874, 2422
BstPAI GACNNNNGTC 1 cut(s) 145
BstSCI CCNGG 5 cut(s) 35, 571, 772, 975, 1441
BstSFI CTRYAG 3 cut(s) 386, 1374, 1413
BstUI CGCG 4 cut(s) 428, 606, 1855, 2017
BstV1I GCAGC 8 cut(s) 329, 409, 774, 937, 1150, 1388, 1414, 1900
BstV2I GAAGAC 3 cut(s) 909, 1530, 2135
BstX2I RGATCY 4 cut(s) 434, 2110, 2158, 2351
BstXI CCANNNNNNTGG 2 cut(s) 780, 2002
BstYI RGATCY 4 cut(s) 434, 2110, 2158, 2351
BstZ17I GTATAC 1 cut(s) 2337
BstZI CGGCCG 1 cut(s) 1934
Bsu15I ATCGAT 2 cut(s) 485, 1661
BsuRI GGCC 4 cut(s) 653, 722, 745, 1936
BsuTUI ATCGAT 2 cut(s) 485, 1661
BtgI CCRYGG 2 cut(s) 51, 426
BtgZI GCGATG 2 cut(s) 85, 687
BtrI CACGTC 2 cut(s) 332, 907
BtsCI GGATG 2 cut(s) 1368, 1983
BtsI GCAGTG 3 cut(s) 383, 405, 1371
BtsIMutI CAGTG 4 cut(s) 383, 405, 1371, 2039
BveI ACCTGC 1 cut(s) 40
Cac8I GCNNGC 4 cut(s) 280, 1388, 1821, 1868
CaiI CAGNNNCTG 1 cut(s) 74
CciI TCATGA 1 cut(s) 967
CfoI GCGC 4 cut(s) 1339, 1855, 1993, 2172
Cfr10I RCCGGY 1 cut(s) 1932
Cfr13I GGNCC 3 cut(s) 862, 2140, 2407
Cfr42I CCGCGG 1 cut(s) 429
ClaI ATCGAT 2 cut(s) 485, 1661
CseI GACGC 2 cut(s) 956, 1334
Csp6I GTAC 8 cut(s) 181, 562, 568, 696, 1273, 2006, 2217, 2425
CviQI GTAC 8 cut(s) 181, 562, 568, 696, 1273, 2006, 2217, 2425
DdeI CTNAG 6 cut(s) 272, 655, 1002, 1269, 2136, 2211
DraIII CACNNNGTG 1 cut(s) 343
DrdI GACNNNNNNGTC 1 cut(s) 2147
DseDI GACNNNNNNGTC 1 cut(s) 2147
EaeI YGGCCR 1 cut(s) 1934
EagI CGGCCG 1 cut(s) 1934
Eam1104I CTCTTC 5 cut(s) 171, 1218, 1785, 1794, 2057
EarI CTCTTC 5 cut(s) 171, 1218, 1785, 1794, 2057
Ecl136II GAGCTC 1 cut(s) 993
EclXI CGGCCG 1 cut(s) 1934
Eco147I AGGCCT 1 cut(s) 745
Eco24I GRGCYC 1 cut(s) 995
Eco32I GATATC 2 cut(s) 27, 2308
Eco47I GGWCC 3 cut(s) 862, 2140, 2407
Eco52I CGGCCG 1 cut(s) 1934
Eco53kI GAGCTC 1 cut(s) 993
Eco57I CTGAAG 3 cut(s) 839, 1637, 2241
Eco88I CYCGRG 1 cut(s) 1917
EcoICRI GAGCTC 1 cut(s) 993
EcoO109I RGGNCCY 1 cut(s) 2140
EcoRII CCWGG 3 cut(s) 571, 772, 975
EcoRV GATATC 2 cut(s) 27, 2308
EcoT22I ATGCAT 1 cut(s) 1224
EcoT38I GRGCYC 1 cut(s) 995
FalI AAGNNNNNCTT 2 cut(s) 168, 200
FaqI GGGAC 2 cut(s) 272, 1736
FauNDI CATATG 1 cut(s) 1158
FbaI TGATCA 4 cut(s) 354, 918, 1135, 1456
FblI GTMKAC 5 cut(s) 108, 116, 787, 2336, 2431
FokI GGATG 2 cut(s) 1375, 1970
FriOI GRGCYC 1 cut(s) 995
FspBI CTAG 7 cut(s) 158, 279, 288, 440, 1085, 1523, 2234
GlaI GCGC 4 cut(s) 1338, 1854, 1992, 2171
HaeII RGCGCY 2 cut(s) 1340, 1994
HaeIII GGCC 4 cut(s) 653, 722, 745, 1936
HapII CCGG 5 cut(s) 36, 1442, 1464, 1933, 2311
HgaI GACGC 2 cut(s) 956, 1334
HhaI GCGC 4 cut(s) 1339, 1855, 1993, 2172
Hin1I GRCGYC 1 cut(s) 1113
Hin6I GCGC 4 cut(s) 1337, 1853, 1991, 2170
HinP1I GCGC 4 cut(s) 1337, 1853, 1991, 2170
HincII GTYRAC 2 cut(s) 109, 117
HindII GTYRAC 2 cut(s) 109, 117
HpaII CCGG 5 cut(s) 36, 1442, 1464, 1933, 2311
HphI GGTGA 4 cut(s) 21, 1498, 1880, 1957
Hpy166II GTNNAC 7 cut(s) 51, 109, 117, 337, 788, 2337, 2432
Hpy188I TCNGA 6 cut(s) 273, 536, 544, 1726, 2203, 2305
Hpy8I GTNNAC 7 cut(s) 51, 109, 117, 337, 788, 2337, 2432
Hpy99I CGWCG 2 cut(s) 110, 1520
HpyAV CCTTC 8 cut(s) 317, 735, 756, 1360, 1696, 1843, 1903, 2296
HpyCH4III ACNGT 5 cut(s) 304, 540, 1414, 1581, 2429
HpyCH4IV ACGT 6 cut(s) 331, 393, 694, 906, 1113, 2008
HpyF10VI GCNNNNNNNGC 9 cut(s) 101, 323, 428, 698, 848, 1172, 1336, 1852, 1919
HpyF3I CTNAG 6 cut(s) 272, 655, 1002, 1269, 2136, 2211
HpySE526I ACGT 6 cut(s) 331, 393, 694, 906, 1113, 2008
Hsp92I GRCGYC 1 cut(s) 1113
HspAI GCGC 4 cut(s) 1337, 1853, 1991, 2170
Kpn2I TCCGGA 1 cut(s) 2310
Ksp22I TGATCA 4 cut(s) 354, 918, 1135, 1456
KspI CCGCGG 1 cut(s) 429
LguI GCTCTTC 1 cut(s) 1218
LmnI GCTCC 4 cut(s) 323, 1327, 1816, 2377
Lsp1109I GCAGC 8 cut(s) 329, 409, 774, 937, 1150, 1388, 1414, 1900
LweI GCATC 5 cut(s) 226, 710, 1069, 1231, 1667
MaeI CTAG 7 cut(s) 158, 279, 288, 440, 1085, 1523, 2234
MaeII ACGT 6 cut(s) 331, 393, 694, 906, 1113, 2008
MaeIII GTNAC 6 cut(s) 56, 459, 578, 1120, 1142, 1828
MfeI CAATTG 2 cut(s) 44, 2123
MflI RGATCY 4 cut(s) 434, 2110, 2158, 2351
MhlI GDGCHC 2 cut(s) 995, 2244
MlyI GAGTC 2 cut(s) 783, 1626
MmeI TCCRAC 4 cut(s) 522, 570, 889, 1884
Mph1103I ATGCAT 1 cut(s) 1224
MroI TCCGGA 1 cut(s) 2310
MroXI GAANNNNTTC 3 cut(s) 745, 852, 1478
MseI TTAA 4 cut(s) 186, 795, 833, 1190
MslI CAYNNNNRTG 2 cut(s) 1065, 1280
MspA1I CMGCKG 5 cut(s) 428, 859, 1427, 1615, 2099
MspCI CTTAAG 1 cut(s) 185
MspI CCGG 5 cut(s) 36, 1442, 1464, 1933, 2311
MspR9I CCNGG 5 cut(s) 37, 573, 774, 977, 1443
MunI CAATTG 2 cut(s) 44, 2123
Mva1269I GAATGC 1 cut(s) 2401
MvaI CCWGG 3 cut(s) 573, 774, 977
MvnI CGCG 4 cut(s) 428, 606, 1855, 2017
MwoI GCNNNNNNNGC 9 cut(s) 101, 323, 428, 698, 848, 1172, 1336, 1852, 1919
NciI CCSGG 2 cut(s) 37, 1443
NdeI CATATG 1 cut(s) 1158
NheI GCTAGC 1 cut(s) 278
NlaIV GGNNCC 3 cut(s) 557, 1176, 2142
NmuCI GTSAC 2 cut(s) 578, 1828
NsiI ATGCAT 1 cut(s) 1224
NspI RCATGY 5 cut(s) 115, 167, 195, 1874, 2422
PagI TCATGA 1 cut(s) 967
PaqCI CACCTGC 1 cut(s) 40
PceI AGGCCT 1 cut(s) 745
PciI ACATGT 2 cut(s) 111, 191
PciSI GCTCTTC 1 cut(s) 1218
PcsI WCGNNNNNNNCGW 2 cut(s) 1203, 2014
PctI GAATGC 1 cut(s) 2401
PdmI GAANNNNTTC 3 cut(s) 745, 852, 1478
PflFI GACNNNGTC 1 cut(s) 446
PfoI TCCNGGA 1 cut(s) 772
PleI GAGTC 2 cut(s) 783, 1626
PpsI GAGTC 2 cut(s) 783, 1626
Ppu21I YACGTR 2 cut(s) 695, 2009
PpuMI RGGWCCY 1 cut(s) 2140
PscI ACATGT 2 cut(s) 111, 191
PshAI GACNNNNGTC 1 cut(s) 145
Psp124BI GAGCTC 1 cut(s) 995
Psp5II RGGWCCY 1 cut(s) 2140
Psp6I CCWGG 3 cut(s) 571, 772, 975
PspGI CCWGG 3 cut(s) 571, 772, 975
PspN4I GGNNCC 3 cut(s) 557, 1176, 2142
PspPI GGNCC 3 cut(s) 862, 2140, 2407
PspPPI RGGWCCY 1 cut(s) 2140
PstI CTGCAG 2 cut(s) 390, 1378
PstNI CAGNNNCTG 1 cut(s) 74
PsuI RGATCY 4 cut(s) 434, 2110, 2158, 2351
PsyI GACNNNGTC 1 cut(s) 446
PvuII CAGCTG 3 cut(s) 859, 1427, 2099
RsaI GTAC 8 cut(s) 182, 563, 569, 697, 1274, 2007, 2218, 2426
RsaNI GTAC 8 cut(s) 181, 562, 568, 696, 1273, 2006, 2217, 2425
RseI CAYNNNNRTG 2 cut(s) 1065, 1280
SacI GAGCTC 1 cut(s) 995
SacII CCGCGG 1 cut(s) 429
SalI GTCGAC 2 cut(s) 107, 115
SapI GCTCTTC 1 cut(s) 1218
SaqAI TTAA 4 cut(s) 186, 795, 833, 1190
Sau96I GGNCC 3 cut(s) 862, 2140, 2407
SchI GAGTC 2 cut(s) 783, 1626
ScrFI CCNGG 5 cut(s) 37, 573, 774, 977, 1443
SduI GDGCHC 2 cut(s) 995, 2244
SfaNI GCATC 5 cut(s) 226, 710, 1069, 1231, 1667
SfcI CTRYAG 3 cut(s) 386, 1374, 1413
Sfr303I CCGCGG 1 cut(s) 429
SgrBI CCGCGG 1 cut(s) 429
SinI GGWCC 3 cut(s) 862, 2140, 2407
SmiMI CAYNNNNRTG 2 cut(s) 1065, 1280
SmlI CTYRAG 3 cut(s) 185, 1308, 2345
SmoI CTYRAG 3 cut(s) 185, 1308, 2345
SseBI AGGCCT 1 cut(s) 745
SsiI CCGC 8 cut(s) 426, 428, 495, 604, 953, 1613, 1683, 2015
SspMI CTAG 7 cut(s) 158, 279, 288, 440, 1085, 1523, 2234
SstI GAGCTC 1 cut(s) 995
StuI AGGCCT 1 cut(s) 745
StyD4I CCNGG 5 cut(s) 35, 571, 772, 975, 1441
TaaI ACNGT 5 cut(s) 304, 540, 1414, 1581, 2429
TaiI ACGT 6 cut(s) 334, 396, 697, 909, 1116, 2011
TaqI TCGA 7 cut(s) 108, 116, 485, 490, 1225, 1661, 1788
TatI WGTACW 2 cut(s) 561, 1272
TauI GCSGC 2 cut(s) 428, 431
Tru1I TTAA 4 cut(s) 186, 795, 833, 1190
Tru9I TTAA 4 cut(s) 186, 795, 833, 1190
TscAI CASTG 4 cut(s) 390, 412, 1378, 2046
TseFI GTSAC 2 cut(s) 578, 1828
TseI GCWGC 8 cut(s) 317, 422, 762, 950, 1163, 1376, 1427, 1913
Tsp45I GTSAC 2 cut(s) 578, 1828
TspGWI ACGGA 1 cut(s) 1533
TspRI CASTG 4 cut(s) 390, 412, 1378, 2046
Tth111I GACNNNGTC 1 cut(s) 446
Vha464I CTTAAG 1 cut(s) 185
VpaK11BI GGWCC 3 cut(s) 862, 2140, 2407
XapI RAATTY 5 cut(s) 882, 934, 1474, 1727, 2229
XbaI TCTAGA 2 cut(s) 287, 439
XceI RCATGY 5 cut(s) 115, 167, 195, 1874, 2422
XmiI GTMKAC 5 cut(s) 108, 116, 787, 2336, 2431
XmnI GAANNNNTTC 3 cut(s) 745, 852, 1478
XspI CTAG 7 cut(s) 158, 279, 288, 440, 1085, 1523, 2234
ZraI GACGTC 1 cut(s) 1114
Zsp2I ATGCAT 1 cut(s) 1224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.