Rmu_co8352751.1_g000001

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8352751.1
OG0000157
Physical Location & Seq
Reverse (-)
1 .. 774
774 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8352751.1_g000001.1.cds

Sequence Viewer

Length: 299 bp
atggaaaacaaccaaggaaaaactcctcaagaattattcactgaagagcatatggtgttaatgcgtcgaggagaaaaatggatgaaggttactgcaacttcatgtatgctagttgcaactattatcgcaaccgttgtgttctcagctgcatttagcatacctggtggcatagatgatcataccggaaagccaaactttttgaaaaagaaggcctttctagactttaccatagctgatgaagtagcactcttgtcctcttcaactgcaatgctgatgttcttgttcatccttacctcgcg
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

100

Amino Acids

11.12

Weight (kDa)

6.72

Isoelectric Point (pI)

27.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 298
AcuI CTGAAG 1 cut(s) 63
AgsI TTSAA 2 cut(s) 202, 261
AjnI CCWGG 1 cut(s) 160
AluBI AGCT 2 cut(s) 146, 233
AluI AGCT 2 cut(s) 146, 233
AoxI GGCC 1 cut(s) 210
ApeKI GCWGC 1 cut(s) 146
BbvI GCAGC 1 cut(s) 133
BciT130I CCWGG 1 cut(s) 162
BclI TGATCA 1 cut(s) 175
BfaI CTAG 2 cut(s) 110, 218
BisI GCNGC 1 cut(s) 147
BlsI GCNGC 1 cut(s) 148
Bme1390I CCNGG 1 cut(s) 162
BmrFI CCNGG 1 cut(s) 162
BpuEI CTTGAG 1 cut(s) 12
BsaJI CCNNGG 1 cut(s) 13
BsaWI WCCGGW 1 cut(s) 182
Bse3DI GCAATG 1 cut(s) 273
BseBI CCWGG 1 cut(s) 162
BseDI CCNNGG 1 cut(s) 13
BseGI GGATG 2 cut(s) 87, 285
BseMI GCAATG 1 cut(s) 273
BseMII CTCAG 1 cut(s) 156
BseRI GAGGAG 2 cut(s) 15, 84
BseXI GCAGC 1 cut(s) 133
Bsh1236I CGCG 1 cut(s) 298
BshFI GGCC 1 cut(s) 212
BsiSI CCGG 1 cut(s) 183
BsnI GGCC 1 cut(s) 212
Bsp143I GATC 1 cut(s) 175
BspANI GGCC 1 cut(s) 212
BspCNI CTCAG 1 cut(s) 155
BspFNI CGCG 1 cut(s) 298
BspQI GCTCTTC 1 cut(s) 39
BsrDI GCAATG 1 cut(s) 273
BssECI CCNNGG 1 cut(s) 13
BssMI GATC 1 cut(s) 175
BssT1I CCWWGG 1 cut(s) 13
Bst2UI CCWGG 1 cut(s) 162
Bst4CI ACNGT 1 cut(s) 133
Bst6I CTCTTC 2 cut(s) 39, 262
BstDEI CTNAG 1 cut(s) 142
BstF5I GGATG 2 cut(s) 87, 285
BstFNI CGCG 1 cut(s) 298
BstKTI GATC 1 cut(s) 178
BstMBI GATC 1 cut(s) 175
BstNI CCWGG 1 cut(s) 162
BstSCI CCNGG 1 cut(s) 160
BstUI CGCG 1 cut(s) 298
BstV1I GCAGC 1 cut(s) 133
BsuRI GGCC 1 cut(s) 212
BtsCI GGATG 2 cut(s) 87, 285
BtsIMutI CAGTG 1 cut(s) 39
CseI GACGC 1 cut(s) 53
CsiI ACCWGGT 1 cut(s) 160
CviAII CATG 1 cut(s) 102
CviJI RGCY 4 cut(s) 146, 190, 212, 233
CviKI_1 RGCY 4 cut(s) 146, 190, 212, 233
DdeI CTNAG 1 cut(s) 142
DpnI GATC 1 cut(s) 177
DpnII GATC 1 cut(s) 175
Eam1104I CTCTTC 2 cut(s) 39, 262
EarI CTCTTC 2 cut(s) 39, 262
Eco130I CCWWGG 1 cut(s) 13
Eco147I AGGCCT 1 cut(s) 212
Eco57I CTGAAG 1 cut(s) 63
EcoRII CCWGG 1 cut(s) 160
EcoT14I CCWWGG 1 cut(s) 13
ErhI CCWWGG 1 cut(s) 13
FaeI CATG 1 cut(s) 105
FaiI YATR 8 cut(s) 51, 53, 103, 107, 158, 170, 180, 230
FalI AAGNNNNNCTT 4 cut(s) 179, 211, 197, 229
FatI CATG 1 cut(s) 101
FauNDI CATATG 1 cut(s) 51
FbaI TGATCA 1 cut(s) 175
Fnu4HI GCNGC 1 cut(s) 147
FokI GGATG 2 cut(s) 94, 272
Fsp4HI GCNGC 1 cut(s) 147
FspBI CTAG 2 cut(s) 110, 218
GluI GCNGC 1 cut(s) 147
HaeIII GGCC 1 cut(s) 212
HapII CCGG 1 cut(s) 183
HgaI GACGC 1 cut(s) 53
Hin1II CATG 1 cut(s) 105
HpaII CCGG 1 cut(s) 183
Hpy188III TCNNGA 2 cut(s) 29, 218
Hpy99I CGWCG 1 cut(s) 69
HpyAV CCTTC 2 cut(s) 79, 202
HpyCH4III ACNGT 1 cut(s) 133
HpyCH4V TGCA 4 cut(s) 95, 116, 149, 266
HpyF3I CTNAG 1 cut(s) 142
Hsp92II CATG 1 cut(s) 105
Ksp22I TGATCA 1 cut(s) 175
Kzo9I GATC 1 cut(s) 175
LguI GCTCTTC 1 cut(s) 39
LpnPI CCDG 3 cut(s) 147, 174, 196
Lsp1109I GCAGC 1 cut(s) 133
MabI ACCWGGT 1 cut(s) 160
MaeI CTAG 2 cut(s) 110, 218
MaeIII GTNAC 1 cut(s) 88
MalI GATC 1 cut(s) 177
MboI GATC 1 cut(s) 175
MboII GAAGA 2 cut(s) 56, 249
MluCI AATT 1 cut(s) 32
MnlI CCTC 3 cut(s) 36, 62, 265
MseI TTAA 1 cut(s) 59
MspA1I CMGCKG 1 cut(s) 146
MspI CCGG 1 cut(s) 183
MspR9I CCNGG 1 cut(s) 162
MvaI CCWGG 1 cut(s) 162
MvnI CGCG 1 cut(s) 298
NdeI CATATG 1 cut(s) 51
NdeII GATC 1 cut(s) 175
NlaIII CATG 1 cut(s) 105
PceI AGGCCT 1 cut(s) 212
PciSI GCTCTTC 1 cut(s) 39
PkrI GCNGC 1 cut(s) 148
Psp6I CCWGG 1 cut(s) 160
PspGI CCWGG 1 cut(s) 160
PvuII CAGCTG 1 cut(s) 146
SapI GCTCTTC 1 cut(s) 39
SaqAI TTAA 1 cut(s) 59
SatI GCNGC 1 cut(s) 147
Sau3AI GATC 1 cut(s) 175
ScrFI CCNGG 1 cut(s) 162
SetI ASST 5 cut(s) 90, 148, 163, 235, 296
SexAI ACCWGGT 1 cut(s) 160
SmlI CTYRAG 1 cut(s) 27
SmoI CTYRAG 1 cut(s) 27
Sse9I AATT 1 cut(s) 32
SseBI AGGCCT 1 cut(s) 212
SspMI CTAG 2 cut(s) 110, 218
StuI AGGCCT 1 cut(s) 212
StyD4I CCNGG 1 cut(s) 160
StyI CCWWGG 1 cut(s) 13
TaaI ACNGT 1 cut(s) 133
TaqI TCGA 1 cut(s) 67
TasI AATT 1 cut(s) 32
Tru1I TTAA 1 cut(s) 59
Tru9I TTAA 1 cut(s) 59
TscAI CASTG 1 cut(s) 46
TseI GCWGC 1 cut(s) 146
TspDTI ATGAA 4 cut(s) 90, 98, 252, 274
TspRI CASTG 1 cut(s) 46
XbaI TCTAGA 1 cut(s) 217
XspI CTAG 2 cut(s) 110, 218
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.