Rroxscaffold_1G00035730

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000157
Physical Location & Seq
Forward (+)
51975093 .. 51978824
3732 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00035730.1

Sequence Viewer

Length: 2019 bp
ATGAGGGCCCTTATAGATATTGAGAGAGGATTGAGGAATCGAAGGCAATTTCCTACCAATTTCCCTCAGAAATCTATTAGTCGTGACTCTGAGCTTGGTGGTCGAGTTTCGGCAGGGCTGCATGCTTGCGTGTTTATACCATTTGTTCAATCTGGAACCATGTCTATCCCACAAGCAGAACATGTAGCACCTACTGGAATTCAATTAATAACCACAGCTCGTGGCAATTCAGTAACTGGGATAGACAACCAATCTACAAAATTCACTGCCATCGACATTTTGGCTGATGCGGCTCAACCAAACAGACCTTCACCTCATCTACTAGAACATAAAAATAGAGAAAAATACCTCAAGACATGTGTTGCCCTCTATAAGCATGCACTAAAGGGCGACTGGGAAGCCGCTGAACAAATCTTGAAAGAGGATAGGTCACTTCTGAGTGCTAGCATAACAAGATCAGGATGTGAAACAGTTCTTCACGTTGCAGCAGGATCAAGACATATCCACTTTGTGCAGAAACTGGTCAACATGATGGACAAAGAACACTTGGTACTGCAAGACATAAATGGAAACACTGCCTTGTGCATTGCCGCTGCGGCTGGATCTCTAGACATTGTCCAGATTTTGATAGACCATAATAATTCTTTGCTGACAATTCGAGGTGGTAAGGATATGGCACCACCCTACATGGCTGCTGTATTAGGACAGTCGGAAATGGCATGTTACCTGTACGACAAAAGTGAAAAGATGTTGGAGAAAACCGACCGAGAAAACTTGTTTTTTTCTTCCATTAACAATGGTTTGTACGATTTGGCCTTTGAGTTGCTAGTTGCTGATAAAGCATTAGCAAAGGCACGTACTAGTTCGCAGAAAAATAAAACGGCCTTGCATATCTTGGCTCGAAGACCTTCAGCATTTGGTGGCAGCCAAAGTCCACGAATATGGACTAGACTCATTAAGTCATGTTTGAAGTTTGCATGCAAAACAAAGTTGAAAGAAACTAATGGAGCCCTTCAACTAGTCTGCCGCCTCTGGGAAGAAATCTTGAGAGACGAGCACGATAACGTGATGAGGCTGATCAAATTTCCAACCAACTTGCTATTTGACACAGCAGAATTAGGGAATTATGAGTTCCTAGCAGCACTTATGAGCTCTTATCCTGAGTTAGTTTGGGAAACTGATGAAAATAATCGAACTATAATCCATGTCGCAGTTTTGCATCGTCATGCAGGTATTTTCAATCTAGTGCATGAGATAGGTTCAATCAGGGATGTCATAGTGACATATAAGGATCATCAGGGTAACAATATTGTGCATATGGCTGCAAAATTAGCACCTCAAAATCAACTGAATCTCGTGTCAGGCGTAGCTCTTCAAATGCAGCGAGAGTTAGTATGGTTTGAGGAAGTCAAAACAATTGTCCAACCTCAATACATAGAGATGGAAAACAACCAAGGAAAAACTCCTCAAGAGTTATTCACTGAAGAGCATATGGTGTTAATGCGTCGAGGAGAAAAATGGATGAAGGTTACCGCAACTTCATGTATGCTAGTTGCAACTATTATTGCAACCGTTGTGTTCTCAGCTGCATTTAGCATACCTGGTGGCACAGATGATCATACCGGAAAGCCAAACTTTTTGAAAAAGAAAGCCTTTCTAGACTTTACCATAGCTGATGAAGTAGCACTCTTTTCCTCTTCAACTGCAATGCTGATGTTCTTGTTCATCCTTACCTCGCGGTATGCAGAAAATGATTTCCTCAAGTCCTTGCCCATAAAGTTGATGGTAGGACTCACTTGCCTTTTCATCTCTATAGCATCTATGATGATGGCTTTCAGCACTGCGTTGTATTTGTCTTGTCAATATGGATCAAAATGGGTCCCAGATCTTATATTTATATTTGCAATTCTCCCTGTTGCTTTGTATGCGTTTATGCAATTCCCTCTCATGTCTGATATGTCCTCTTCAACATTTTGTTCAAGTCTTTTATTTCAGCCATGGAAACGTATGATATACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

672

Amino Acids

75.35

Weight (kDa)

8.32

Isoelectric Point (pI)

43.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 127 - 213 2.3e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 159 - 247 4.9e-10 Ankyrin repeats (3 copies)
PGG PF13962 505 - 618 8e-26 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1220
AccB1I GGYRCC 1 cut(s) 676
AccII CGCG 1 cut(s) 1738
AciI CCGC 7 cut(s) 290, 402, 591, 596, 1027, 1533, 1738
AclWI GGATC 4 cut(s) 499, 610, 1299, 1876
AcsI RAATTY 3 cut(s) 198, 260, 1082
AcuI CTGAAG 2 cut(s) 894, 1503
AdeI CACNNNGTG 1 cut(s) 511
AfaI GTAC 4 cut(s) 552, 731, 806, 859
AfiI CCNNNNNNNGG 1 cut(s) 1033
AflIII ACRYGT 2 cut(s) 181, 356
AhlI ACTAGT 2 cut(s) 860, 1018
AjnI CCWGG 1 cut(s) 1600
AjuI GAANNNNNNNTTGG 2 cut(s) 292, 324
AluBI AGCT 6 cut(s) 94, 218, 1152, 1370, 1586, 1673
AluI AGCT 6 cut(s) 94, 218, 1152, 1370, 1586, 1673
Alw21I GWGCWC 2 cut(s) 1059, 1154
Alw26I GTCTC 1 cut(s) 1044
AlwI GGATC 4 cut(s) 499, 610, 1299, 1876
AlwNI CAGNNNCTG 2 cut(s) 236, 520
AoxI GGCC 3 cut(s) 6, 813, 882
ApaI GGGCCC 1 cut(s) 10
ApeKI GCWGC 9 cut(s) 118, 485, 593, 692, 924, 1139, 1322, 1381, 1586
ApoI RAATTY 3 cut(s) 198, 260, 1082
ArsI GACNNNNNNTTYG 2 cut(s) 1404, 1436
AseI ATTAAT 1 cut(s) 206
Asp700I GAANNNNTTC 2 cut(s) 471, 907
AspS9I GGNCC 3 cut(s) 6, 7, 1879
AsuHPI GGTGA 1 cut(s) 303
AsuNHI GCTAGC 1 cut(s) 443
AvaII GGWCC 1 cut(s) 1879
BaeGI GKGCMC 1 cut(s) 10
BanI GGYRCC 1 cut(s) 676
BanII GRGCYC 3 cut(s) 10, 1012, 1154
BauI CACGAG 2 cut(s) 219, 1355
BbsI GAAGAC 1 cut(s) 910
Bbv12I GWGCWC 2 cut(s) 1059, 1154
BbvI GCAGC 9 cut(s) 105, 497, 580, 679, 936, 1151, 1309, 1393, 1573
BccI CCATC 5 cut(s) 278, 526, 1435, 1777, 1822
BceAI ACGGC 1 cut(s) 897
BciT130I CCWGG 1 cut(s) 1602
BclI TGATCA 2 cut(s) 1077, 1615
BcoDI GTCTC 1 cut(s) 1044
BcuI ACTAGT 2 cut(s) 860, 1018
BfmI CTRYAG 1 cut(s) 1812
BfuAI ACCTGC 1 cut(s) 1220
BglI GCCNNNNNGGC 1 cut(s) 596
BglII AGATCT 1 cut(s) 1885
Bme1390I CCNGG 1 cut(s) 1602
Bme18I GGWCC 1 cut(s) 1879
BmgT120I GGNCC 3 cut(s) 6, 7, 1879
BmiI GGNNCC 6 cut(s) 8, 157, 678, 1009, 1880, 1881
BmrFI CCNGG 1 cut(s) 1602
BmrI ACTGGG 2 cut(s) 246, 403
BmsI GCATC 3 cut(s) 277, 1228, 1826
BmtI GCTAGC 1 cut(s) 447
BmuI ACTGGG 2 cut(s) 246, 403
BpiI GAAGAC 1 cut(s) 910
BpuEI CTTGAG 4 cut(s) 335, 1066, 1452, 1745
BsaAI YACGTR 1 cut(s) 857
BsaJI CCNNGG 2 cut(s) 1453, 1997
BsaWI WCCGGW 1 cut(s) 1622
Bsc4I CCNNNNNNNGG 1 cut(s) 1033
Bse1I ACTGG 4 cut(s) 199, 241, 398, 525
Bse3DI GCAATG 2 cut(s) 585, 1713
BseBI CCWGG 1 cut(s) 1602
BseDI CCNNGG 2 cut(s) 1453, 1997
BseGI GGATG 4 cut(s) 467, 1276, 1527, 1725
BseLI CCNNNNNNNGG 1 cut(s) 1033
BseMI GCAATG 2 cut(s) 585, 1713
BseMII CTCAG 5 cut(s) 80, 81, 428, 1152, 1596
BseNI ACTGG 4 cut(s) 199, 241, 398, 525
BseRI GAGGAG 2 cut(s) 1455, 1524
BseSI GKGCMC 1 cut(s) 10
BseXI GCAGC 9 cut(s) 105, 497, 580, 679, 936, 1151, 1309, 1393, 1573
BsgI GTGCAG 1 cut(s) 533
Bsh1236I CGCG 1 cut(s) 1738
Bsh1285I CGRYCG 1 cut(s) 766
BshFI GGCC 3 cut(s) 8, 815, 884
BshNI GGYRCC 1 cut(s) 676
BsiEI CGRYCG 1 cut(s) 766
BsiHKAI GWGCWC 2 cut(s) 1059, 1154
BsiSI CCGG 1 cut(s) 1623
BslFI GGGAC 1 cut(s) 1865
BslI CCNNNNNNNGG 1 cut(s) 1033
BsmAI GTCTC 1 cut(s) 1044
BsmBI CGTCTC 1 cut(s) 1044
BsmFI GGGAC 1 cut(s) 1865
BsnI GGCC 3 cut(s) 8, 815, 884
Bsp120I GGGCCC 1 cut(s) 6
Bsp1286I GDGCHC 4 cut(s) 10, 1012, 1059, 1154
Bsp143I GATC 8 cut(s) 455, 491, 602, 1077, 1291, 1615, 1868, 1885
Bsp19I CCATGG 1 cut(s) 1997
BspACI CCGC 7 cut(s) 290, 402, 591, 596, 1027, 1533, 1738
BspANI GGCC 3 cut(s) 8, 815, 884
BspCNI CTCAG 5 cut(s) 79, 82, 429, 1153, 1595
BspFNI CGCG 1 cut(s) 1738
BspLI GGNNCC 6 cut(s) 8, 157, 678, 1009, 1880, 1881
BspMI ACCTGC 1 cut(s) 1220
BspOI GCTAGC 1 cut(s) 447
BspPI GGATC 4 cut(s) 499, 610, 1299, 1876
BspQI GCTCTTC 2 cut(s) 1377, 1479
BspT107I GGYRCC 1 cut(s) 676
BsrDI GCAATG 2 cut(s) 585, 1713
BsrI ACTGG 4 cut(s) 199, 241, 398, 525
BssECI CCNNGG 2 cut(s) 1453, 1997
BssMI GATC 8 cut(s) 455, 491, 602, 1077, 1291, 1615, 1868, 1885
BssSI CACGAG 2 cut(s) 219, 1355
BssT1I CCWWGG 2 cut(s) 1453, 1997
Bst2BI CACGAG 2 cut(s) 219, 1355
Bst2UI CCWGG 1 cut(s) 1602
Bst4CI ACNGT 3 cut(s) 472, 708, 1573
Bst6I CTCTTC 4 cut(s) 1377, 1479, 1702, 1969
BstBAI YACGTR 1 cut(s) 857
BstC8I GCNNGC 5 cut(s) 123, 127, 378, 445, 979
BstDEI CTNAG 5 cut(s) 66, 90, 437, 1161, 1582
BstDSI CCRYGG 1 cut(s) 1997
BstEII GGTNACC 1 cut(s) 1528
BstF5I GGATG 4 cut(s) 467, 1276, 1527, 1725
BstFNI CGCG 1 cut(s) 1738
BstKTI GATC 8 cut(s) 458, 494, 605, 1080, 1294, 1618, 1871, 1888
BstMAI GTCTC 1 cut(s) 1044
BstMBI GATC 8 cut(s) 455, 491, 602, 1077, 1291, 1615, 1868, 1885
BstMCI CGRYCG 1 cut(s) 766
BstMWI GCNNNNNNNGC 5 cut(s) 290, 596, 839, 1331, 1925
BstNI CCWGG 1 cut(s) 1602
BstNSI RCATGY 6 cut(s) 125, 185, 360, 380, 723, 981
BstPI GGTNACC 1 cut(s) 1528
BstSCI CCNGG 1 cut(s) 1600
BstSFI CTRYAG 1 cut(s) 1812
BstSLI GKGCMC 1 cut(s) 10
BstUI CGCG 1 cut(s) 1738
BstV1I GCAGC 9 cut(s) 105, 497, 580, 679, 936, 1151, 1309, 1393, 1573
BstV2I GAAGAC 1 cut(s) 910
BstX2I RGATCY 2 cut(s) 602, 1885
BstXI CCANNNNNNTGG 1 cut(s) 942
BstYI RGATCY 2 cut(s) 602, 1885
BsuRI GGCC 3 cut(s) 8, 815, 884
BtgI CCRYGG 1 cut(s) 1997
BtsCI GGATG 4 cut(s) 467, 1276, 1527, 1725
BtsI GCAGTG 3 cut(s) 264, 573, 1839
BtsIMutI CAGTG 4 cut(s) 264, 573, 1479, 1839
BveI ACCTGC 1 cut(s) 1220
Cac8I GCNNGC 5 cut(s) 123, 127, 378, 445, 979
CaiI CAGNNNCTG 2 cut(s) 236, 520
Cfr13I GGNCC 3 cut(s) 6, 7, 1879
CseI GACGC 1 cut(s) 1493
CsiI ACCWGGT 1 cut(s) 1600
Csp6I GTAC 4 cut(s) 551, 730, 805, 858
CviQI GTAC 4 cut(s) 551, 730, 805, 858
DdeI CTNAG 5 cut(s) 66, 90, 437, 1161, 1582
DpnI GATC 8 cut(s) 457, 493, 604, 1079, 1293, 1617, 1870, 1887
DpnII GATC 8 cut(s) 455, 491, 602, 1077, 1291, 1615, 1868, 1885
DraIII CACNNNGTG 1 cut(s) 511
Eam1104I CTCTTC 4 cut(s) 1377, 1479, 1702, 1969
EarI CTCTTC 4 cut(s) 1377, 1479, 1702, 1969
Ecl136II GAGCTC 1 cut(s) 1152
Eco130I CCWWGG 2 cut(s) 1453, 1997
Eco24I GRGCYC 3 cut(s) 10, 1012, 1154
Eco47I GGWCC 1 cut(s) 1879
Eco53kI GAGCTC 1 cut(s) 1152
Eco57I CTGAAG 2 cut(s) 894, 1503
Eco91I GGTNACC 1 cut(s) 1528
EcoICRI GAGCTC 1 cut(s) 1152
EcoO109I RGGNCCY 3 cut(s) 6, 7, 1879
EcoO65I GGTNACC 1 cut(s) 1528
EcoRI GAATTC 1 cut(s) 198
EcoRII CCWGG 1 cut(s) 1600
EcoT14I CCWWGG 2 cut(s) 1453, 1997
EcoT38I GRGCYC 3 cut(s) 10, 1012, 1154
ErhI CCWWGG 2 cut(s) 1453, 1997
Esp3I CGTCTC 1 cut(s) 1044
FalI AAGNNNNNCTT 4 cut(s) 1619, 1651, 1637, 1669
FaqI GGGAC 1 cut(s) 1865
FauNDI CATATG 2 cut(s) 1317, 1491
FbaI TGATCA 2 cut(s) 1077, 1615
FokI GGATG 4 cut(s) 474, 1283, 1534, 1712
FriOI GRGCYC 3 cut(s) 10, 1012, 1154
HaeIII GGCC 3 cut(s) 8, 815, 884
HapII CCGG 1 cut(s) 1623
HgaI GACGC 1 cut(s) 1493
HincII GTYRAC 1 cut(s) 526
HindII GTYRAC 1 cut(s) 526
HinfI GANTC 5 cut(s) 37, 86, 951, 1351, 1791
HpaII CCGG 1 cut(s) 1623
HphI GGTGA 1 cut(s) 303
Hpy166II GTNNAC 2 cut(s) 526, 935
Hpy188I TCNGA 5 cut(s) 69, 91, 438, 712, 1954
Hpy8I GTNNAC 2 cut(s) 526, 935
Hpy99I CGWCG 1 cut(s) 1509
HpyAV CCTTC 5 cut(s) 36, 318, 918, 1022, 1519
HpyCH4III ACNGT 3 cut(s) 472, 708, 1573
HpyCH4IV ACGT 4 cut(s) 480, 856, 1065, 2005
HpyF10VI GCNNNNNNNGC 5 cut(s) 290, 596, 839, 1331, 1925
HpyF3I CTNAG 5 cut(s) 66, 90, 437, 1161, 1582
HpySE526I ACGT 4 cut(s) 480, 856, 1065, 2005
KflI GGGWCCC 1 cut(s) 1879
Ksp22I TGATCA 2 cut(s) 1077, 1615
Kzo9I GATC 8 cut(s) 455, 491, 602, 1077, 1291, 1615, 1868, 1885
LguI GCTCTTC 2 cut(s) 1377, 1479
LmnI GCTCC 1 cut(s) 1007
Lsp1109I GCAGC 9 cut(s) 105, 497, 580, 679, 936, 1151, 1309, 1393, 1573
LweI GCATC 3 cut(s) 277, 1228, 1826
MabI ACCWGGT 1 cut(s) 1600
MaeII ACGT 4 cut(s) 480, 856, 1065, 2005
MaeIII GTNAC 7 cut(s) 83, 232, 429, 722, 1279, 1301, 1528
MalI GATC 8 cut(s) 457, 493, 604, 1079, 1293, 1617, 1870, 1887
MboI GATC 8 cut(s) 455, 491, 602, 1077, 1291, 1615, 1868, 1885
MboII GAAGA 8 cut(s) 467, 777, 915, 1049, 1364, 1496, 1689, 1956
MfeI CAATTG 1 cut(s) 1416
MflI RGATCY 2 cut(s) 602, 1885
MhlI GDGCHC 4 cut(s) 10, 1012, 1059, 1154
MlyI GAGTC 3 cut(s) 80, 945, 1785
MmeI TCCRAC 4 cut(s) 690, 732, 1112, 1447
MroXI GAANNNNTTC 2 cut(s) 471, 907
MseI TTAA 4 cut(s) 206, 792, 957, 1499
MslI CAYNNNNRTG 3 cut(s) 940, 1224, 1439
MspA1I CMGCKG 3 cut(s) 404, 593, 1586
MspI CCGG 1 cut(s) 1623
MspR9I CCNGG 1 cut(s) 1602
MunI CAATTG 1 cut(s) 1416
MvaI CCWGG 1 cut(s) 1602
MvnI CGCG 1 cut(s) 1738
MwoI GCNNNNNNNGC 5 cut(s) 290, 596, 839, 1331, 1925
NcoI CCATGG 1 cut(s) 1997
NdeI CATATG 2 cut(s) 1317, 1491
NdeII GATC 8 cut(s) 455, 491, 602, 1077, 1291, 1615, 1868, 1885
NheI GCTAGC 1 cut(s) 443
NlaIV GGNNCC 6 cut(s) 8, 157, 678, 1009, 1880, 1881
NmuCI GTSAC 3 cut(s) 83, 429, 1279
NspI RCATGY 6 cut(s) 125, 185, 360, 380, 723, 981
PaeI GCATGC 3 cut(s) 125, 380, 981
PciI ACATGT 2 cut(s) 181, 356
PciSI GCTCTTC 2 cut(s) 1377, 1479
PcsI WCGNNNNNNNCGW 1 cut(s) 1362
PdmI GAANNNNTTC 2 cut(s) 471, 907
PfeI GAWTC 2 cut(s) 37, 1351
PflFI GACNNNGTC 1 cut(s) 614
PleI GAGTC 3 cut(s) 80, 945, 1785
PpsI GAGTC 3 cut(s) 80, 945, 1785
Ppu21I YACGTR 1 cut(s) 857
PpuMI RGGWCCY 1 cut(s) 1879
PscI ACATGT 2 cut(s) 181, 356
PshBI ATTAAT 1 cut(s) 206
Psp124BI GAGCTC 1 cut(s) 1154
Psp5II RGGWCCY 1 cut(s) 1879
Psp6I CCWGG 1 cut(s) 1600
PspEI GGTNACC 1 cut(s) 1528
PspGI CCWGG 1 cut(s) 1600
PspN4I GGNNCC 6 cut(s) 8, 157, 678, 1009, 1880, 1881
PspOMI GGGCCC 1 cut(s) 6
PspPI GGNCC 3 cut(s) 6, 7, 1879
PspPPI RGGWCCY 1 cut(s) 1879
PsrI GAACNNNNNNTAC 2 cut(s) 534, 566
PstNI CAGNNNCTG 2 cut(s) 236, 520
PsuI RGATCY 2 cut(s) 602, 1885
PsyI GACNNNGTC 1 cut(s) 614
PvuII CAGCTG 1 cut(s) 1586
RsaI GTAC 4 cut(s) 552, 731, 806, 859
RsaNI GTAC 4 cut(s) 551, 730, 805, 858
RseI CAYNNNNRTG 3 cut(s) 940, 1224, 1439
SacI GAGCTC 1 cut(s) 1154
SapI GCTCTTC 2 cut(s) 1377, 1479
SaqAI TTAA 4 cut(s) 206, 792, 957, 1499
Sau3AI GATC 8 cut(s) 455, 491, 602, 1077, 1291, 1615, 1868, 1885
Sau96I GGNCC 3 cut(s) 6, 7, 1879
SchI GAGTC 3 cut(s) 80, 945, 1785
ScrFI CCNGG 1 cut(s) 1602
SduI GDGCHC 4 cut(s) 10, 1012, 1059, 1154
SexAI ACCWGGT 1 cut(s) 1600
SfaNI GCATC 3 cut(s) 277, 1228, 1826
SfcI CTRYAG 1 cut(s) 1812
SinI GGWCC 1 cut(s) 1879
SmiMI CAYNNNNRTG 3 cut(s) 940, 1224, 1439
SmlI CTYRAG 4 cut(s) 350, 1045, 1467, 1760
SmoI CTYRAG 4 cut(s) 350, 1045, 1467, 1760
SpeI ACTAGT 2 cut(s) 860, 1018
SphI GCATGC 3 cut(s) 125, 380, 981
SsiI CCGC 7 cut(s) 290, 402, 591, 596, 1027, 1533, 1738
SspI AATATT 1 cut(s) 1309
SstI GAGCTC 1 cut(s) 1154
StyD4I CCNGG 1 cut(s) 1600
StyI CCWWGG 2 cut(s) 1453, 1997
TaaI ACNGT 3 cut(s) 472, 708, 1573
TaiI ACGT 4 cut(s) 483, 859, 1068, 2008
TaqI TCGA 7 cut(s) 40, 103, 273, 658, 901, 1192, 1507
TaqII GACCGA 1 cut(s) 780
TauI GCSGC 5 cut(s) 293, 404, 593, 599, 1029
TfiI GAWTC 2 cut(s) 37, 1351
Tru1I TTAA 4 cut(s) 206, 792, 957, 1499
Tru9I TTAA 4 cut(s) 206, 792, 957, 1499
TscAI CASTG 4 cut(s) 271, 580, 1486, 1846
TseFI GTSAC 3 cut(s) 83, 429, 1279
TseI GCWGC 9 cut(s) 118, 485, 593, 692, 924, 1139, 1322, 1381, 1586
Tsp45I GTSAC 3 cut(s) 83, 429, 1279
TspDTI ATGAA 6 cut(s) 1197, 1530, 1538, 1692, 1714, 1795
TspRI CASTG 4 cut(s) 271, 580, 1486, 1846
Tth111I GACNNNGTC 1 cut(s) 614
VpaK11BI GGWCC 1 cut(s) 1879
VspI ATTAAT 1 cut(s) 206
XapI RAATTY 3 cut(s) 198, 260, 1082
XbaI TCTAGA 2 cut(s) 607, 1657
XceI RCATGY 6 cut(s) 125, 185, 360, 380, 723, 981
XcmI CCANNNNNNNNNTGG 2 cut(s) 277, 1780
XmnI GAANNNNTTC 2 cut(s) 471, 907
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.