Rw5G028840

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000157
Physical Location & Seq
Reverse (-)
43819437 .. 43821968
2532 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G028840.1

Sequence Viewer

Length: 1800 bp
ATGGCTACTGGTAATGGAGATCCAATGGCAAGTGCACATACTGCCATCAACATTCACTCGATACATTCGCATCGTTTTCTAGAAAACAACAATAGAGAGCTATACCTTAATAAATGTGTGCCACTCTCTAAGTATGCACTAAAAGGCAATTGGGAAGCTGCTGAACGAATCTTGAAGGAAGATCCGAGTCTTTTGACTTCTAGCATAACAAGAGGGGAGGACACTGTCCTTCACATTGCAGCAGGAGCAAGACATGTTCGCTTTGTGGAGAAGCTGGTCGAAATGATGGAAGAACTGAATGGAAACGAGACATGTTCACAAAACTTGGCACTGAAAGACATGAATGGAAACACTGCCTTCAGCATTGCTGCTGCAGCTGGAAGTATTGAAATTGCAGAGATTTTGATCAAGAAGAATAAGGATTTGCGAATAATTCGAGGTGGTGCAGGAATGACACCACTCTATATGGCTGCCTTGTTGGGACAGTCTGTAATGGCAGATAACCTGTACTCTGAAACCAAGGAAATGTTGGAGGAATTCGACCGCCAAGCGTTGTTTTTTACTTGTATCGATAATGGTCTGTACGATCTAGCTTTGAAGATTCTAAGAAGTGACAGAGCATTAGCTAAGGCTTGTAATGCAAAAGAGGAAACAGCTTTGCATATCTTGGCAAGAACGCCTTCAGACTTCACCAGCCAAAGTCCAGGAACGTGGAGTAGACTCATCAACTCATTTATCCCAGATTGGAATTTCTCATACAATAGAAACTTGAAACAAGTCAATGAAGCCCTTCAACTAGTCCAATGCCTTTGGACAGAAATCTTGAGAAATGATCATGACGATGTGATGAGACTAATCAAACATCCTTCAAGATTACTGTTCGACGCTACAAAATTAGGAAATTATGAGTTCCTGGCAGTGCTCATTAACTCTTATCCTGACTTAATATGGGAACTTGATGACAAAAATCGGAGTATAATCCATGTTGCTGTTTTGCATCGTCATGCAAGTATCTTCAATTTAGTGCATGAGATAGGTTCCATCAAGGATATCATAGTGACATTTACTGATGATGAAGAGAGTAATAACATTTTACATTTGGCTGCAAAATTAGCACCTCCAAATCAACTCAACCTTGTATCAGGAGCAGCTCTTCAAATGCAGCGAGAGTTGGTATGGTTTGAGGAAGTGAAAAAGATTGTACAACCTAAGTCCATAGAGATGAAAAACAAGAAAGGAGAAACACCACGAGAATTGTTCACAAGTGAGCATGAAGGGTTGTTACACAAAGGAGAAGCATGGATGAAGGACACTGCAAGTTCATGCATGATTGTTGCGGCTCTTATCGCAGCTGTTGTGTTTTCAGCTGCATTTAGCGTACCTGGTGGTACATCTGATAATACAGGACAGCCAAACTTTCTAAAAGAGACTGCTTTCCTATTCTTTGCCATAGCAGATGGAGTAGCACTCGTTTCCTCTTCAACTTCAATACTGATGTTCTTGTTCATCCTCACATCGCGTTACGCTGAAGGTGATTTCCTCAAATCGTTACCGTTGAAGTTGATGATTGGACTCGCATCACTTTTCATATCTATAGTATCCATGATGGTAGCTTTTAGCGCAACCATCTATTTAGACTGTCACTATGGATTAGGATGGGTCCCAAATCTTATATTTGTATTTGCATTTGTCCCGGTTGCTTTGTTTGCTTTTCTGCAGTTTCCTCTCTTGTCTGATATGTTTTCTTCAACATATTGTTCAATTCTTTTATTTCAGCCATGGAAACATATGATCGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

599

Amino Acids

66.92

Weight (kDa)

5.8

Isoelectric Point (pI)

38.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 46 - 142 1.6e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 108 - 170 1.8e-06 Ankyrin repeats (3 copies)
PGG PF13962 433 - 545 2.9e-25 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 718
AccII CGCG 1 cut(s) 1519
AciI CCGC 2 cut(s) 544, 1337
AclWI GGATC 2 cut(s) 14, 176
AcsI RAATTY 2 cut(s) 536, 748
AcuI CTGAAG 3 cut(s) 343, 666, 1548
AfaI GTAC 5 cut(s) 509, 584, 1203, 1380, 1390
AflIII ACRYGT 2 cut(s) 253, 311
AhlI ACTAGT 1 cut(s) 796
AjnI CCWGG 3 cut(s) 703, 912, 1381
Alw21I GWGCWC 2 cut(s) 37, 924
Alw26I GTCTC 3 cut(s) 302, 844, 1421
Alw44I GTGCAC 1 cut(s) 33
AlwI GGATC 2 cut(s) 14, 176
ApaLI GTGCAC 1 cut(s) 33
ApoI RAATTY 2 cut(s) 536, 748
Asp700I GAANNNNTTC 2 cut(s) 679, 789
AspLEI GCGC 1 cut(s) 1622
AspS9I GGNCC 1 cut(s) 1660
AsuC2I CCSGG 1 cut(s) 1694
AsuHPI GGTGA 2 cut(s) 682, 1544
AvaII GGWCC 1 cut(s) 1660
BaeGI GKGCMC 1 cut(s) 37
BarI GAAGNNNNNNTAC 2 cut(s) 1266, 1298
BauI CACGAG 1 cut(s) 1248
Bbv12I GWGCWC 2 cut(s) 37, 924
BccI CCATC 7 cut(s) 53, 280, 1049, 1451, 1600, 1634, 1650
BciT130I CCWGG 3 cut(s) 705, 914, 1383
BciVI GTATCC 1 cut(s) 1609
BclI TGATCA 2 cut(s) 405, 832
BcnI CCSGG 1 cut(s) 1694
BcoDI GTCTC 3 cut(s) 302, 844, 1421
BcuI ACTAGT 1 cut(s) 796
BfaI CTAG 4 cut(s) 80, 201, 590, 797
BfmI CTRYAG 3 cut(s) 372, 1593, 1715
BfuI GTATCC 1 cut(s) 1609
Bme1390I CCNGG 4 cut(s) 705, 914, 1383, 1694
Bme18I GGWCC 1 cut(s) 1660
BmgT120I GGNCC 1 cut(s) 1660
BmiI GGNNCC 3 cut(s) 1039, 1661, 1662
BmrFI CCNGG 4 cut(s) 705, 914, 1383, 1694
BmsI GCATC 3 cut(s) 79, 1006, 1586
BplI GAGNNNNNCTC 2 cut(s) 1452, 1484
Bpu10I CCTNAGC 1 cut(s) 627
BpuEI CTTGAG 1 cut(s) 844
BpuMI CCSGG 1 cut(s) 1694
Bsa29I ATCGAT 1 cut(s) 570
BsaBI GATNNNNATC 1 cut(s) 404
BsaJI CCNNGG 2 cut(s) 519, 1778
Bse1I ACTGG 1 cut(s) 13
Bse3DI GCAATG 2 cut(s) 234, 363
Bse8I GATNNNNATC 1 cut(s) 404
BseBI CCWGG 3 cut(s) 705, 914, 1383
BseCI ATCGAT 1 cut(s) 570
BseDI CCNNGG 2 cut(s) 519, 1778
BseGI GGATG 4 cut(s) 862, 1308, 1506, 1661
BseJI GATNNNNATC 1 cut(s) 404
BseMI GCAATG 2 cut(s) 234, 363
BseNI ACTGG 1 cut(s) 13
BseSI GKGCMC 1 cut(s) 37
BsgI GTGCAG 1 cut(s) 465
Bsh1236I CGCG 1 cut(s) 1519
Bsh1285I CGRYCG 1 cut(s) 544
BshVI ATCGAT 1 cut(s) 570
BsiEI CGRYCG 1 cut(s) 544
BsiHKAI GWGCWC 2 cut(s) 37, 924
BsiSI CCGG 1 cut(s) 1694
BslFI GGGAC 3 cut(s) 495, 1646, 1676
BsmAI GTCTC 3 cut(s) 302, 844, 1421
BsmFI GGGAC 3 cut(s) 495, 1646, 1676
Bsp1286I GDGCHC 2 cut(s) 37, 924
Bsp1407I TGTACA 1 cut(s) 1201
Bsp143I GATC 6 cut(s) 19, 181, 405, 586, 832, 1791
Bsp19I CCATGG 1 cut(s) 1778
BspACI CCGC 2 cut(s) 544, 1337
BspDI ATCGAT 1 cut(s) 570
BspFNI CGCG 1 cut(s) 1519
BspHI TCATGA 1 cut(s) 835
BspLI GGNNCC 3 cut(s) 1039, 1661, 1662
BspMAI CTGCAG 2 cut(s) 376, 1719
BspPI GGATC 2 cut(s) 14, 176
BspQI GCTCTTC 1 cut(s) 1158
BsrDI GCAATG 2 cut(s) 234, 363
BsrGI TGTACA 1 cut(s) 1201
BsrI ACTGG 1 cut(s) 13
BssECI CCNNGG 2 cut(s) 519, 1778
BssMI GATC 6 cut(s) 19, 181, 405, 586, 832, 1791
BssSI CACGAG 1 cut(s) 1248
BssT1I CCWWGG 2 cut(s) 519, 1778
Bst2BI CACGAG 1 cut(s) 1248
Bst2UI CCWGG 3 cut(s) 705, 914, 1383
Bst4CI ACNGT 5 cut(s) 226, 486, 879, 1554, 1640
Bst6I CTCTTC 3 cut(s) 1071, 1158, 1483
BstAPI GCANNNNNTGC 1 cut(s) 41
BstAUI TGTACA 1 cut(s) 1201
BstDEI CTNAG 4 cut(s) 129, 605, 627, 1209
BstDSI CCRYGG 1 cut(s) 1778
BstF5I GGATG 4 cut(s) 862, 1308, 1506, 1661
BstFNI CGCG 1 cut(s) 1519
BstHHI GCGC 1 cut(s) 1622
BstKTI GATC 6 cut(s) 22, 184, 408, 589, 835, 1794
BstMAI GTCTC 3 cut(s) 302, 844, 1421
BstMBI GATC 6 cut(s) 19, 181, 405, 586, 832, 1791
BstMCI CGRYCG 1 cut(s) 544
BstMWI GCNNNNNNNGC 8 cut(s) 41, 245, 374, 638, 1112, 1346, 1619, 1706
BstNI CCWGG 3 cut(s) 705, 914, 1383
BstNSI RCATGY 2 cut(s) 257, 315
BstSCI CCNGG 4 cut(s) 703, 912, 1381, 1692
BstSFI CTRYAG 3 cut(s) 372, 1593, 1715
BstSLI GKGCMC 1 cut(s) 37
BstUI CGCG 1 cut(s) 1519
BstX2I RGATCY 2 cut(s) 19, 181
BstXI CCANNNNNNTGG 1 cut(s) 711
BstYI RGATCY 2 cut(s) 19, 181
Bsu15I ATCGAT 1 cut(s) 570
BsuI GTATCC 1 cut(s) 1609
BsuTUI ATCGAT 1 cut(s) 570
BtgI CCRYGG 1 cut(s) 1778
BtgZI GCGATG 1 cut(s) 1500
BtsCI GGATG 4 cut(s) 862, 1308, 1506, 1661
BtsI GCAGTG 3 cut(s) 351, 924, 1311
BtsIMutI CAGTG 5 cut(s) 222, 329, 351, 924, 1311
CciI TCATGA 1 cut(s) 835
CfoI GCGC 1 cut(s) 1622
Cfr13I GGNCC 1 cut(s) 1660
ClaI ATCGAT 1 cut(s) 570
CseI GACGC 1 cut(s) 893
CsiI ACCWGGT 1 cut(s) 1381
Csp6I GTAC 5 cut(s) 508, 583, 1202, 1379, 1389
CspCI CAANNNNNGTGG 2 cut(s) 1236, 1271
CviQI GTAC 5 cut(s) 508, 583, 1202, 1379, 1389
DdeI CTNAG 4 cut(s) 129, 605, 627, 1209
DpnI GATC 6 cut(s) 21, 183, 407, 588, 834, 1793
DpnII GATC 6 cut(s) 19, 181, 405, 586, 832, 1791
Eam1104I CTCTTC 3 cut(s) 1071, 1158, 1483
EarI CTCTTC 3 cut(s) 1071, 1158, 1483
Eco130I CCWWGG 2 cut(s) 519, 1778
Eco32I GATATC 1 cut(s) 1051
Eco47I GGWCC 1 cut(s) 1660
Eco57I CTGAAG 3 cut(s) 343, 666, 1548
EcoO109I RGGNCCY 1 cut(s) 1660
EcoRI GAATTC 1 cut(s) 536
EcoRII CCWGG 3 cut(s) 703, 912, 1381
EcoRV GATATC 1 cut(s) 1051
EcoT14I CCWWGG 2 cut(s) 519, 1778
EcoT22I ATGCAT 1 cut(s) 1328
ErhI CCWWGG 2 cut(s) 519, 1778
FalI AAGNNNNNCTT 2 cut(s) 664, 696
FaqI GGGAC 3 cut(s) 495, 1646, 1676
FauNDI CATATG 1 cut(s) 1788
FbaI TGATCA 2 cut(s) 405, 832
FblI GTMKAC 1 cut(s) 718
FokI GGATG 4 cut(s) 849, 1315, 1493, 1668
FspBI CTAG 4 cut(s) 80, 201, 590, 797
GlaI GCGC 1 cut(s) 1621
HapII CCGG 1 cut(s) 1694
HgaI GACGC 1 cut(s) 893
HhaI GCGC 1 cut(s) 1622
Hin6I GCGC 1 cut(s) 1620
HinP1I GCGC 1 cut(s) 1620
HinfI GANTC 5 cut(s) 168, 187, 601, 720, 1572
HpaII CCGG 1 cut(s) 1694
HphI GGTGA 2 cut(s) 682, 1544
Hpy166II GTNNAC 4 cut(s) 35, 317, 719, 1260
Hpy188I TCNGA 6 cut(s) 186, 514, 685, 972, 1396, 1735
Hpy188III TCNNGA 8 cut(s) 80, 172, 409, 823, 836, 870, 938, 1143
Hpy8I GTNNAC 4 cut(s) 35, 317, 719, 1260
Hpy99I CGWCG 1 cut(s) 887
HpyAV CCTTC 9 cut(s) 169, 239, 367, 690, 800, 876, 1268, 1300, 1523
HpyCH4III ACNGT 5 cut(s) 226, 486, 879, 1554, 1640
HpyCH4IV ACGT 1 cut(s) 710
HpyF10VI GCNNNNNNNGC 8 cut(s) 41, 245, 374, 638, 1112, 1346, 1619, 1706
HpyF3I CTNAG 4 cut(s) 129, 605, 627, 1209
HpySE526I ACGT 1 cut(s) 710
HspAI GCGC 1 cut(s) 1620
KflI GGGWCCC 1 cut(s) 1660
Ksp22I TGATCA 2 cut(s) 405, 832
Kzo9I GATC 6 cut(s) 19, 181, 405, 586, 832, 1791
LguI GCTCTTC 1 cut(s) 1158
LmnI GCTCC 2 cut(s) 245, 1145
LweI GCATC 3 cut(s) 79, 1006, 1586
MabI ACCWGGT 1 cut(s) 1381
MaeI CTAG 4 cut(s) 80, 201, 590, 797
MaeII ACGT 1 cut(s) 710
MaeIII GTNAC 6 cut(s) 611, 1057, 1281, 1520, 1548, 1640
MalI GATC 6 cut(s) 21, 183, 407, 588, 834, 1793
MboI GATC 6 cut(s) 19, 181, 405, 586, 832, 1791
MboII GAAGA 9 cut(s) 191, 302, 424, 610, 1006, 1088, 1145, 1470, 1737
MfeI CAATTG 1 cut(s) 148
MflI RGATCY 2 cut(s) 19, 181
MhlI GDGCHC 2 cut(s) 37, 924
MlyI GAGTC 3 cut(s) 196, 714, 1566
MmeI TCCRAC 1 cut(s) 510
Mph1103I ATGCAT 1 cut(s) 1328
MroXI GAANNNNTTC 2 cut(s) 679, 789
MseI TTAA 3 cut(s) 108, 927, 944
MslI CAYNNNNRTG 3 cut(s) 840, 1002, 1220
MspA1I CMGCKG 3 cut(s) 377, 1352, 1367
MspI CCGG 1 cut(s) 1694
MspR9I CCNGG 4 cut(s) 705, 914, 1383, 1694
MunI CAATTG 1 cut(s) 148
MvaI CCWGG 3 cut(s) 705, 914, 1383
MvnI CGCG 1 cut(s) 1519
MwoI GCNNNNNNNGC 8 cut(s) 41, 245, 374, 638, 1112, 1346, 1619, 1706
NciI CCSGG 1 cut(s) 1694
NcoI CCATGG 1 cut(s) 1778
NdeI CATATG 1 cut(s) 1788
NdeII GATC 6 cut(s) 19, 181, 405, 586, 832, 1791
NlaIV GGNNCC 3 cut(s) 1039, 1661, 1662
NmuCI GTSAC 3 cut(s) 611, 1057, 1640
NsiI ATGCAT 1 cut(s) 1328
NspI RCATGY 2 cut(s) 257, 315
PagI TCATGA 1 cut(s) 835
PciI ACATGT 2 cut(s) 253, 311
PciSI GCTCTTC 1 cut(s) 1158
PdmI GAANNNNTTC 2 cut(s) 679, 789
PfeI GAWTC 2 cut(s) 168, 601
PflFI GACNNNGTC 1 cut(s) 224
PfoI TCCNGGA 1 cut(s) 703
PleI GAGTC 3 cut(s) 195, 714, 1566
PpsI GAGTC 3 cut(s) 195, 714, 1566
PpuMI RGGWCCY 1 cut(s) 1660
PscI ACATGT 2 cut(s) 253, 311
Psp5II RGGWCCY 1 cut(s) 1660
Psp6I CCWGG 3 cut(s) 703, 912, 1381
PspGI CCWGG 3 cut(s) 703, 912, 1381
PspN4I GGNNCC 3 cut(s) 1039, 1661, 1662
PspPI GGNCC 1 cut(s) 1660
PspPPI RGGWCCY 1 cut(s) 1660
PstI CTGCAG 2 cut(s) 376, 1719
PsuI RGATCY 2 cut(s) 19, 181
PsyI GACNNNGTC 1 cut(s) 224
PvuII CAGCTG 3 cut(s) 377, 1352, 1367
RsaI GTAC 5 cut(s) 509, 584, 1203, 1380, 1390
RsaNI GTAC 5 cut(s) 508, 583, 1202, 1379, 1389
RseI CAYNNNNRTG 3 cut(s) 840, 1002, 1220
SapI GCTCTTC 1 cut(s) 1158
SaqAI TTAA 3 cut(s) 108, 927, 944
Sau3AI GATC 6 cut(s) 19, 181, 405, 586, 832, 1791
Sau96I GGNCC 1 cut(s) 1660
SchI GAGTC 3 cut(s) 196, 714, 1566
ScrFI CCNGG 4 cut(s) 705, 914, 1383, 1694
SduI GDGCHC 2 cut(s) 37, 924
SexAI ACCWGGT 1 cut(s) 1381
SfaNI GCATC 3 cut(s) 79, 1006, 1586
SfcI CTRYAG 3 cut(s) 372, 1593, 1715
SinI GGWCC 1 cut(s) 1660
SmiMI CAYNNNNRTG 3 cut(s) 840, 1002, 1220
SmlI CTYRAG 1 cut(s) 823
SmoI CTYRAG 1 cut(s) 823
SpeI ACTAGT 1 cut(s) 796
SsiI CCGC 2 cut(s) 544, 1337
SspMI CTAG 4 cut(s) 80, 201, 590, 797
StyD4I CCNGG 4 cut(s) 703, 912, 1381, 1692
StyI CCWWGG 2 cut(s) 519, 1778
TaaI ACNGT 5 cut(s) 226, 486, 879, 1554, 1640
TaiI ACGT 1 cut(s) 713
TaqI TCGA 7 cut(s) 59, 279, 436, 540, 570, 882, 1794
TatI WGTACW 2 cut(s) 507, 1201
TauI GCSGC 1 cut(s) 1340
TfiI GAWTC 2 cut(s) 168, 601
Tru1I TTAA 3 cut(s) 108, 927, 944
Tru9I TTAA 3 cut(s) 108, 927, 944
TscAI CASTG 5 cut(s) 229, 336, 358, 924, 1318
TseFI GTSAC 3 cut(s) 611, 1057, 1640
Tsp45I GTSAC 3 cut(s) 611, 1057, 1640
TspDTI ATGAA 9 cut(s) 356, 798, 1089, 1238, 1287, 1311, 1319, 1495, 1576
TspRI CASTG 5 cut(s) 229, 336, 358, 924, 1318
Tth111I GACNNNGTC 1 cut(s) 224
VneI GTGCAC 1 cut(s) 33
VpaK11BI GGWCC 1 cut(s) 1660
XapI RAATTY 2 cut(s) 536, 748
XbaI TCTAGA 1 cut(s) 79
XceI RCATGY 2 cut(s) 257, 315
XcmI CCANNNNNNNNNTGG 1 cut(s) 526
XmiI GTMKAC 1 cut(s) 718
XmnI GAANNNNTTC 2 cut(s) 679, 789
XspI CTAG 4 cut(s) 80, 201, 590, 797
Zsp2I ATGCAT 1 cut(s) 1328
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.