Rw5G028380

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000157
Physical Location & Seq
Forward (+)
42916957 .. 42920623
3667 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G028380.1

Sequence Viewer

Length: 1806 bp
ATGAGGATCTATTCTTTACTACTAATTTTTGTGTATTGTGGAAAGAAATTTCCTACCAATTTCCCTAGTGACTTTCAACTAGCTCGTCGCGTGCATGCTTGTATCTTTACACAATTTGTTCAATCTGGAACCATGGCTACCCCACAAGCACAACATATATCATCTGCCGGGATTCAATTAACCACGGCTAGCGGGGATTCAGCAACTGGGATAGATAGTCAATCAGCGGACATTGGCATCGACATTTCGGCTGATTCGGCTCAACCTACCAGACCTTTGCCTTATCTACTAGAACATACAAATAGAGAAGAATACCTTAAGACATGTGTTGCCCTGTATAAGTATGCACTAAAGGGCGATTGGGAAGCTGCGGAACGAATCTTGAAAAAGGATATGCAACTTCTGAGAGCAAGCATATCTAGAGGATGTGAAACAGTCCTTCACGTTGCAGCAGGAGCAAGACGTATTCACTTTGTGGAGAAACTGATCAGCATGATGAACGTAGAAGATTTGGCACTGCAGGACGTAAATGGAAACACTGCCTTGTGTATTGCCGCTGCTGCTGGATCTCTAGACATTGTCCAGATTTTGATACAAAAGAATAAGTCTTTACTATCTATTCAAGGCGGTAAAGATATGACACCAGCCTATATGGCTGTTGTGTTGGGACAGTCAGAAATGGCATGGCACCTGTACGCTGAAAGTAACACGATGTTGGAGAAAACAGACCGCGAAAACTTGTTTTTTTCTTGCATCAACAATAGTTTGTATGATTTGGCCTTACAGTTGCTAAATGCTGATAGAACATTAGCGACTGCACGTACTAAATCGCAGAAAGATAAAACAGCCCTGCATATATTGGCTAGAAGGCCTTCAGCATTTGGTGGCAGCCAAAGTCCAGGAATGTGGAGTAGACTTATTAACTCATACGTGATGAGACTGATCAAATATCCGTCAAATTTATTATTTGACGCAGCGGAATTAGGGAATTATGAGTTTCTGGCGGCACTTATGAGCTCTTATCCTGAGTTGGTATGGGAAACTGATAATAAAAATCGAACCATTATCCATGTCGCAGTTCTGCATCGTCACGCAAGTATCTTTAATCTAGTGCATGAAATAGGCTCGATCAAAGATGTCATAGTGACATATGAGGATGATCAGGGTAACAACATTGTACAGATGGCTGCAAAATTAGCACCTCAAAATCAGTTGAATCTCGTGTCAGGCGTAGCACTTCAAATGCATCGAGAGTTGGTATGGTTTGAGGAAGTCAAAAAAATTGTTCAACCTCAGTATATAGAGATGGAAAACCAACAAGGAAAAACACCTCAAGAATTATTCACTATGGAGCATAGGGCGCTAATGCGTCAAGGAGAATCATGGATGAAAGACACTGCAACTTCATGCTTGCTCGTTGCAACTATTATTGCAACTATTCCCAACTTCTTAAAAGAGAAAATGTTTCTATACTTTACCATAGCTGATGGACTAGCACTCTTTTCCTCTTCAACTGCAATGCTAATGTTCTTGTTCATCCTAACCTCGCGGTATGCAGAAAACGATTTTCTCAAATCCTTACCATTGAAGTTGATGATAGGACTCACTTCCTTGTTCATCTCTATAGCTTCCATGATGATGTCTTTCAGCACCGCCTTCTATTTATTTTACATTTTTATTTGCACTTGTCCCAGACTCCCAGTTGCTTTGTTTGCATTTATGCAATTCCCTCTCGTGTCTGACATGTCCTCTTCTATATTTTGCTCAAGTTTGTTATTTCAGCCGTGGAAACACATGCTCTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

601

Amino Acids

67.53

Weight (kDa)

6.92

Isoelectric Point (pI)

42.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 116 - 201 5e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 147 - 234 1.1e-09 Ankyrin repeats (3 copies)
PGG PF13962 481 - 555 1.7e-06 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 687
AccI GTMKAC 1 cut(s) 913
AccII CGCG 3 cut(s) 90, 732, 1549
AclWI GGATC 2 cut(s) 14, 574
AcsI RAATTY 2 cut(s) 47, 958
AcuI CTGAAG 1 cut(s) 858
AdeI CACNNNGTG 1 cut(s) 475
AfaI GTAC 3 cut(s) 695, 823, 1179
AflII CTTAAG 1 cut(s) 317
AflIII ACRYGT 2 cut(s) 323, 1743
AjnI CCWGG 1 cut(s) 898
AluBI AGCT 5 cut(s) 83, 368, 1017, 1484, 1628
AluI AGCT 5 cut(s) 83, 368, 1017, 1484, 1628
Alw21I GWGCWC 1 cut(s) 1019
Alw26I GTCTC 1 cut(s) 931
AlwI GGATC 2 cut(s) 14, 574
AlwNI CAGNNNCTG 1 cut(s) 206
AoxI GGCC 2 cut(s) 777, 869
ApeKI GCWGC 7 cut(s) 368, 449, 557, 560, 888, 974, 1187
ApoI RAATTY 2 cut(s) 47, 958
Asp700I GAANNNNTTC 1 cut(s) 871
AspLEI GCGC 1 cut(s) 1363
AsuC2I CCSGG 1 cut(s) 169
AsuNHI GCTAGC 1 cut(s) 188
BaeI ACNNNNGTAYC 2 cut(s) 1081, 1114
BanI GGYRCC 1 cut(s) 687
BanII GRGCYC 1 cut(s) 1019
BauI CACGAG 2 cut(s) 1220, 1733
Bbv12I GWGCWC 1 cut(s) 1019
BbvI GCAGC 7 cut(s) 355, 461, 544, 547, 900, 986, 1174
BccI CCATC 3 cut(s) 1177, 1300, 1481
BceAI ACGGC 2 cut(s) 201, 1768
BciT130I CCWGG 1 cut(s) 900
BclI TGATCA 3 cut(s) 486, 942, 1159
BcnI CCSGG 1 cut(s) 169
BcoDI GTCTC 1 cut(s) 931
BfmI CTRYAG 2 cut(s) 518, 1623
BfoI RGCGCY 1 cut(s) 1364
BfrI CTTAAG 1 cut(s) 317
BglI GCCNNNNNGGC 1 cut(s) 653
BisI GCNGC 9 cut(s) 369, 450, 555, 558, 561, 889, 975, 1005, 1188
BlsI GCNGC 9 cut(s) 370, 451, 556, 559, 562, 890, 976, 1006, 1189
Bme1390I CCNGG 2 cut(s) 169, 900
BmiI GGNNCC 2 cut(s) 130, 689
BmrFI CCNGG 2 cut(s) 169, 900
BmrI ACTGGG 2 cut(s) 216, 1694
BmsI GCATC 4 cut(s) 246, 762, 1093, 1255
BmtI GCTAGC 1 cut(s) 192
BmuI ACTGGG 2 cut(s) 216, 1694
BpuEI CTTGAG 2 cut(s) 1317, 1750
BpuMI CCSGG 1 cut(s) 169
BsaAI YACGTR 2 cut(s) 821, 931
BsaJI CCNNGG 3 cut(s) 132, 183, 1784
Bse1I ACTGG 2 cut(s) 211, 1700
Bse3DI GCAATG 1 cut(s) 1524
BseBI CCWGG 1 cut(s) 900
BseDI CCNNGG 3 cut(s) 132, 183, 1784
BseGI GGATG 4 cut(s) 431, 1162, 1392, 1536
BseMI GCAATG 1 cut(s) 1524
BseMII CTCAG 3 cut(s) 395, 1017, 1307
BseNI ACTGG 2 cut(s) 211, 1700
BseXI GCAGC 7 cut(s) 355, 461, 544, 547, 900, 986, 1174
BsgI GTGCAG 1 cut(s) 801
Bsh1236I CGCG 3 cut(s) 90, 732, 1549
BshFI GGCC 2 cut(s) 779, 871
BshNI GGYRCC 1 cut(s) 687
BsiHKAI GWGCWC 1 cut(s) 1019
BsiSI CCGG 1 cut(s) 168
BslFI GGGAC 2 cut(s) 681, 1674
BsmAI GTCTC 1 cut(s) 931
BsmFI GGGAC 2 cut(s) 681, 1674
BsnI GGCC 2 cut(s) 779, 871
Bsp1286I GDGCHC 1 cut(s) 1019
Bsp1407I TGTACA 1 cut(s) 1177
Bsp143I GATC 6 cut(s) 6, 486, 566, 942, 1128, 1159
Bsp19I CCATGG 1 cut(s) 132
BspANI GGCC 2 cut(s) 779, 871
BspCNI CTCAG 3 cut(s) 396, 1018, 1306
BspFNI CGCG 3 cut(s) 90, 732, 1549
BspLI GGNNCC 2 cut(s) 130, 689
BspMAI CTGCAG 1 cut(s) 522
BspOI GCTAGC 1 cut(s) 192
BspPI GGATC 2 cut(s) 14, 574
BspT107I GGYRCC 1 cut(s) 687
BspTI CTTAAG 1 cut(s) 317
BsrDI GCAATG 1 cut(s) 1524
BsrGI TGTACA 1 cut(s) 1177
BsrI ACTGG 2 cut(s) 211, 1700
BssECI CCNNGG 3 cut(s) 132, 183, 1784
BssMI GATC 6 cut(s) 6, 486, 566, 942, 1128, 1159
BssSI CACGAG 2 cut(s) 1220, 1733
BssT1I CCWWGG 1 cut(s) 132
Bst2BI CACGAG 2 cut(s) 1220, 1733
Bst2UI CCWGG 1 cut(s) 900
Bst4CI ACNGT 3 cut(s) 436, 672, 786
Bst6I CTCTTC 2 cut(s) 1513, 1756
BstAFI CTTAAG 1 cut(s) 317
BstAUI TGTACA 1 cut(s) 1177
BstBAI YACGTR 2 cut(s) 821, 931
BstC8I GCNNGC 5 cut(s) 92, 96, 190, 412, 1412
BstDEI CTNAG 3 cut(s) 404, 1026, 1293
BstDSI CCRYGG 3 cut(s) 132, 183, 1784
BstF5I GGATG 4 cut(s) 431, 1162, 1392, 1536
BstFNI CGCG 3 cut(s) 90, 732, 1549
BstH2I RGCGCY 1 cut(s) 1364
BstHHI GCGC 1 cut(s) 1363
BstKTI GATC 6 cut(s) 9, 489, 569, 945, 1131, 1162
BstMAI GTCTC 1 cut(s) 931
BstMBI GATC 6 cut(s) 6, 486, 566, 942, 1128, 1159
BstMWI GCNNNNNNNGC 7 cut(s) 257, 455, 560, 653, 1196, 1360, 1712
BstNI CCWGG 1 cut(s) 900
BstNSI RCATGY 4 cut(s) 98, 327, 1747, 1798
BstSCI CCNGG 2 cut(s) 167, 898
BstSFI CTRYAG 2 cut(s) 518, 1623
BstUI CGCG 3 cut(s) 90, 732, 1549
BstV1I GCAGC 7 cut(s) 355, 461, 544, 547, 900, 986, 1174
BstX2I RGATCY 2 cut(s) 6, 566
BstXI CCANNNNNNTGG 1 cut(s) 906
BstYI RGATCY 2 cut(s) 6, 566
BsuRI GGCC 2 cut(s) 779, 871
BtgI CCRYGG 3 cut(s) 132, 183, 1784
BtsCI GGATG 4 cut(s) 431, 1162, 1392, 1536
BtsI GCAGTG 3 cut(s) 515, 537, 1395
BtsIMutI CAGTG 3 cut(s) 515, 537, 1395
Cac8I GCNNGC 5 cut(s) 92, 96, 190, 412, 1412
CaiI CAGNNNCTG 1 cut(s) 206
CfoI GCGC 1 cut(s) 1363
CseI GACGC 2 cut(s) 980, 1358
Csp6I GTAC 3 cut(s) 694, 822, 1178
CviQI GTAC 3 cut(s) 694, 822, 1178
DdeI CTNAG 3 cut(s) 404, 1026, 1293
DpnI GATC 6 cut(s) 8, 488, 568, 944, 1130, 1161
DpnII GATC 6 cut(s) 6, 486, 566, 942, 1128, 1159
DraIII CACNNNGTG 1 cut(s) 475
Eam1104I CTCTTC 2 cut(s) 1513, 1756
EarI CTCTTC 2 cut(s) 1513, 1756
Ecl136II GAGCTC 1 cut(s) 1017
Eco130I CCWWGG 1 cut(s) 132
Eco147I AGGCCT 1 cut(s) 871
Eco24I GRGCYC 1 cut(s) 1019
Eco53kI GAGCTC 1 cut(s) 1017
Eco57I CTGAAG 1 cut(s) 858
EcoICRI GAGCTC 1 cut(s) 1017
EcoRII CCWGG 1 cut(s) 898
EcoT14I CCWWGG 1 cut(s) 132
EcoT22I ATGCAT 1 cut(s) 1248
EcoT38I GRGCYC 1 cut(s) 1019
ErhI CCWWGG 1 cut(s) 132
FalI AAGNNNNNCTT 2 cut(s) 300, 332
FaqI GGGAC 2 cut(s) 681, 1674
FauI CCCGC 1 cut(s) 185
FauNDI CATATG 1 cut(s) 1150
FbaI TGATCA 3 cut(s) 486, 942, 1159
FblI GTMKAC 1 cut(s) 913
Fnu4HI GCNGC 9 cut(s) 369, 450, 555, 558, 561, 889, 975, 1005, 1188
FokI GGATG 4 cut(s) 438, 1169, 1399, 1523
FriOI GRGCYC 1 cut(s) 1019
Fsp4HI GCNGC 9 cut(s) 369, 450, 555, 558, 561, 889, 975, 1005, 1188
GlaI GCGC 1 cut(s) 1362
GluI GCNGC 9 cut(s) 369, 450, 555, 558, 561, 889, 975, 1005, 1188
HaeII RGCGCY 1 cut(s) 1364
HaeIII GGCC 2 cut(s) 779, 871
HapII CCGG 1 cut(s) 168
HgaI GACGC 2 cut(s) 980, 1358
HhaI GCGC 1 cut(s) 1363
Hin6I GCGC 1 cut(s) 1361
HinP1I GCGC 1 cut(s) 1361
HinfI GANTC 8 cut(s) 172, 197, 254, 378, 1216, 1379, 1602, 1695
HpaII CCGG 1 cut(s) 168
Hpy166II GTNNAC 1 cut(s) 914
Hpy188I TCNGA 3 cut(s) 405, 676, 1741
Hpy188III TCNNGA 8 cut(s) 126, 382, 420, 572, 583, 1025, 1250, 1334
Hpy8I GTNNAC 1 cut(s) 914
Hpy99I CGWCG 1 cut(s) 90
HpyAV CCTTC 4 cut(s) 449, 861, 882, 1666
HpyCH4III ACNGT 3 cut(s) 436, 672, 786
HpyCH4IV ACGT 6 cut(s) 444, 463, 501, 525, 820, 930
HpyF10VI GCNNNNNNNGC 7 cut(s) 257, 455, 560, 653, 1196, 1360, 1712
HpyF3I CTNAG 3 cut(s) 404, 1026, 1293
HpySE526I ACGT 6 cut(s) 444, 463, 501, 525, 820, 930
HspAI GCGC 1 cut(s) 1361
Ksp22I TGATCA 3 cut(s) 486, 942, 1159
Kzo9I GATC 6 cut(s) 6, 486, 566, 942, 1128, 1159
LmnI GCTCC 2 cut(s) 455, 1351
Lsp1109I GCAGC 7 cut(s) 355, 461, 544, 547, 900, 986, 1174
LweI GCATC 4 cut(s) 246, 762, 1093, 1255
MaeII ACGT 6 cut(s) 444, 463, 501, 525, 820, 930
MaeIII GTNAC 5 cut(s) 68, 704, 1088, 1144, 1166
MalI GATC 6 cut(s) 8, 488, 568, 944, 1130, 1161
MboI GATC 6 cut(s) 6, 486, 566, 942, 1128, 1159
MboII GAAGA 4 cut(s) 320, 518, 1500, 1743
MflI RGATCY 2 cut(s) 6, 566
MhlI GDGCHC 1 cut(s) 1019
MlyI GAGTC 2 cut(s) 1596, 1689
MmeI TCCRAC 1 cut(s) 696
Mph1103I ATGCAT 1 cut(s) 1248
MroXI GAANNNNTTC 1 cut(s) 871
MseI TTAA 5 cut(s) 179, 318, 921, 1104, 1451
MslI CAYNNNNRTG 1 cut(s) 1637
MspA1I CMGCKG 3 cut(s) 227, 557, 977
MspCI CTTAAG 1 cut(s) 317
MspI CCGG 1 cut(s) 168
MspR9I CCNGG 2 cut(s) 169, 900
MvaI CCWGG 1 cut(s) 900
MvnI CGCG 3 cut(s) 90, 732, 1549
MwoI GCNNNNNNNGC 7 cut(s) 257, 455, 560, 653, 1196, 1360, 1712
NciI CCSGG 1 cut(s) 169
NcoI CCATGG 1 cut(s) 132
NdeI CATATG 1 cut(s) 1150
NdeII GATC 6 cut(s) 6, 486, 566, 942, 1128, 1159
NheI GCTAGC 1 cut(s) 188
NlaIV GGNNCC 2 cut(s) 130, 689
NmuCI GTSAC 3 cut(s) 68, 1088, 1144
NsiI ATGCAT 1 cut(s) 1248
NspI RCATGY 4 cut(s) 98, 327, 1747, 1798
PaeI GCATGC 1 cut(s) 98
PceI AGGCCT 1 cut(s) 871
PciI ACATGT 2 cut(s) 323, 1743
PcsI WCGNNNNNNNCGW 1 cut(s) 1227
PdmI GAANNNNTTC 1 cut(s) 871
PfeI GAWTC 6 cut(s) 172, 197, 254, 378, 1216, 1379
PflFI GACNNNGTC 1 cut(s) 578
PfoI TCCNGGA 1 cut(s) 898
PkrI GCNGC 9 cut(s) 370, 451, 556, 559, 562, 890, 976, 1006, 1189
PleI GAGTC 2 cut(s) 1596, 1689
PpsI GAGTC 2 cut(s) 1596, 1689
Ppu21I YACGTR 2 cut(s) 821, 931
PscI ACATGT 2 cut(s) 323, 1743
Psp124BI GAGCTC 1 cut(s) 1019
Psp6I CCWGG 1 cut(s) 898
PspGI CCWGG 1 cut(s) 898
PspN4I GGNNCC 2 cut(s) 130, 689
PsrI GAACNNNNNNTAC 2 cut(s) 121, 153
PstI CTGCAG 1 cut(s) 522
PstNI CAGNNNCTG 1 cut(s) 206
PsuI RGATCY 2 cut(s) 6, 566
PsyI GACNNNGTC 1 cut(s) 578
RsaI GTAC 3 cut(s) 695, 823, 1179
RsaNI GTAC 3 cut(s) 694, 822, 1178
RseI CAYNNNNRTG 1 cut(s) 1637
SacI GAGCTC 1 cut(s) 1019
SaqAI TTAA 5 cut(s) 179, 318, 921, 1104, 1451
SatI GCNGC 9 cut(s) 369, 450, 555, 558, 561, 889, 975, 1005, 1188
Sau3AI GATC 6 cut(s) 6, 486, 566, 942, 1128, 1159
SchI GAGTC 2 cut(s) 1596, 1689
ScrFI CCNGG 2 cut(s) 169, 900
SduI GDGCHC 1 cut(s) 1019
SfaNI GCATC 4 cut(s) 246, 762, 1093, 1255
SfcI CTRYAG 2 cut(s) 518, 1623
SmiMI CAYNNNNRTG 1 cut(s) 1637
SmlI CTYRAG 3 cut(s) 317, 1332, 1765
SmoI CTYRAG 3 cut(s) 317, 1332, 1765
SphI GCATGC 1 cut(s) 98
SseBI AGGCCT 1 cut(s) 871
SstI GAGCTC 1 cut(s) 1019
StuI AGGCCT 1 cut(s) 871
StyD4I CCNGG 2 cut(s) 167, 898
StyI CCWWGG 1 cut(s) 132
TaaI ACNGT 3 cut(s) 436, 672, 786
TaiI ACGT 6 cut(s) 447, 466, 504, 528, 823, 933
TaqI TCGA 4 cut(s) 240, 1057, 1127, 1249
TatI WGTACW 1 cut(s) 1177
TauI GCSGC 2 cut(s) 557, 1007
TfiI GAWTC 6 cut(s) 172, 197, 254, 378, 1216, 1379
Tru1I TTAA 5 cut(s) 179, 318, 921, 1104, 1451
Tru9I TTAA 5 cut(s) 179, 318, 921, 1104, 1451
TscAI CASTG 3 cut(s) 522, 544, 1402
TseFI GTSAC 3 cut(s) 68, 1088, 1144
TseI GCWGC 7 cut(s) 368, 449, 557, 560, 888, 974, 1187
Tsp45I GTSAC 3 cut(s) 68, 1088, 1144
TspDTI ATGAA 6 cut(s) 512, 1131, 1395, 1403, 1525, 1606
TspGWI ACGGA 1 cut(s) 942
TspRI CASTG 3 cut(s) 522, 544, 1402
Tth111I GACNNNGTC 1 cut(s) 578
Vha464I CTTAAG 1 cut(s) 317
XapI RAATTY 2 cut(s) 47, 958
XbaI TCTAGA 2 cut(s) 419, 571
XceI RCATGY 4 cut(s) 98, 327, 1747, 1798
XmiI GTMKAC 1 cut(s) 913
XmnI GAANNNNTTC 1 cut(s) 871
Zsp2I ATGCAT 1 cut(s) 1248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.