RchiOBHm_Chr5g0045501

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000157
Physical Location & Seq
Reverse (-)
41486529 .. 41491021
4493 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ32359

Sequence Viewer

Length: 1887 bp
ATGTGTACACAATTTGTTCAATTTGGAACCATATCTATCCCACAACATGTACCACCTCCTGGGATTCAATTACCCACCGCAAAGGGTGATCCAGGAACTGGTGGGCTAGAGAACCAATCTTCAAATTTCACCACCATCGACATTTTGGCAGATCTACCTAAATCTAGGACGCCTTCACTTCATCTACTGGAACACAAAAATAGAGATCTATACCTTATGAAATGCGTGCCTCTCTATAAGTATGCACTAAAAGGTGATTGGGAAGCTGCTGAACAAATCTTGAAAAAAGATCGAACACTTTTGAGTGCTAGCATATCAAGAGGGTGGGACACTGTTCTTCATATTGCAGCAGGAGCAAGACATGTTCACTTTGTGGAGAAACTGGTTGAAATCATGGACAAAGAACACTTGGCACTCCAAGACATAAATGGAAACACTGCGTTATGTATTGCTGCCGCGGCAGGATCAGTAGACATTGTCCAAATTTTGATAAAACATAATGATTCCTTGCTGACAATTCGAGGAGGTCAGAAAATGACACCACCCTATATGGCTGCTGTGTTAGGACAGTCAGAAATGGCATGGTACCTGTACCCTAAAAGTAAAAAGATGATGGAGAAGACAGACCTTGAGAACTTGTTTTTTTCGTGCATCAACAATGGTTTATATGATTTAGCTTTACAGTTGCTAGATACTGATAGAGCATTAGCCAAGGCACGTACTAATCGGCCGAAAAATAAAACCGCCCTACATATCTTGGCTCGAAGGCCTTCAGTATTTGGGAGTCAAAGTCCAGGAATGTGGGGTAGACTCATGAAATCATTCCTCCCAGGTTTTAAGTATGCATTCAAAAGAAATTTAAATCAAGCTGATAAAGCACTTCACCTAGTCCAACGCCTTTGGGAAGAAATTTTGAAAGACGAGCATGATGACGTGATGAGGTTGATCAAATATCCCTCTAATTTAATATTTGATGCAACAGAATTAGGGAATTATGAGTTCCTGGCAGCGCTTATGAGCTCTTATCCTGAGTTAGTATGGGAAACTGATGAAAAAAATCGAACTATAATCCATGTTGCAGTTTTGCATCGTCATGCAAGTATCTTCAATCTAGTGCATGAGATAGGCTCAATCAAGGATGTCATAGTGACTTACGAGGATGATCAGGGTAATAATATAGTGCATATGGTTGCAAAAGCAGCACCTCAAAACCAACTGAATTTGATGTCGGGCGTAGCTCTTCAAATGCAGCGAGAGTTAGTATGGTTTGAGGAAATAAAGAAGATTGTGCAACCTCAATATATAGAGATGGAAAACAAGAAAGGAAAAACACCTCAAGAATTATTCACTGAAGAGCATAAGACGTTAACGCGTCAAGGAGAAAAATGGATGAAGGACACTGCAACTTCATGCTTGCTTGTTGCCACTATTATTGCAACTGTTGTGTTTTCAGCTGCATTTAGTATACCAGGTGGCGCAGATGATCATACTGGCAAGCCAAACTTTTTGAAAGAGAAAGCTTTTTTATACTTTATCATAGCCGACGGAGTGGCACTCTTTTCCTCTTCAACTGCAATGCTGATGTTCTTGTTCATCCTTACCTCTCGGTATGCAGAAAATGATTTCCTCAAGTCCTTGCCCTTGAAGTTGATGGTAGGACTCACTTGCCTCTTCATCTCAATAGCATCTATGATGATGGCTTTCAGCACCGCCTTTTATTTGTCTTGTCAATATGGATCAAGATGGGTTCCAAATCTTACATTTTTCTTTGCAATTGTGCCTGTTGCTTTATATGCATTTCTACAATTCCCTCTTGTGTTTGATATGTCCTCCTCCACATTTTGTTCAAGTCTTTTATTTCAGCCATGGAAACAAATGATATACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

628

Amino Acids

70.9

Weight (kDa)

7.98

Isoelectric Point (pI)

42.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 82 - 167 2.1e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 113 - 201 1.3e-10 Ankyrin repeats (3 copies)
PGG PF13962 461 - 574 8e-27 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 585
AccB1I GGYRCC 1 cut(s) 585
AccB7I CCANNNNNTGG 2 cut(s) 59, 98
AccI GTMKAC 3 cut(s) 471, 808, 1465
AccII CGCG 2 cut(s) 458, 1372
AciI CCGC 5 cut(s) 78, 456, 458, 744, 1710
AclWI GGATC 3 cut(s) 83, 472, 1744
AcoI YGGCCR 1 cut(s) 728
AcsI RAATTY 5 cut(s) 124, 483, 856, 909, 1219
AcuI CTGAAG 2 cut(s) 756, 1371
AcyI GRCGYC 1 cut(s) 170
AdeI CACNNNGTG 1 cut(s) 373
AfaI GTAC 5 cut(s) 7, 51, 587, 593, 721
AfeI AGCGCT 1 cut(s) 1011
AfiI CCNNNNNNNGG 2 cut(s) 59, 98
AflIII ACRYGT 3 cut(s) 46, 361, 1370
AjiI CACGTC 1 cut(s) 934
AjnI CCWGG 6 cut(s) 58, 91, 793, 829, 1002, 1468
AluBI AGCT 7 cut(s) 266, 677, 869, 1020, 1238, 1454, 1520
AluI AGCT 7 cut(s) 266, 677, 869, 1020, 1238, 1454, 1520
Alw21I GWGCWC 1 cut(s) 1022
AlwI GGATC 3 cut(s) 83, 472, 1744
AlwNI CAGNNNCTG 1 cut(s) 98
Aor51HI AGCGCT 1 cut(s) 1011
AoxI GGCC 2 cut(s) 728, 767
ApeKI GCWGC 8 cut(s) 266, 347, 452, 554, 1007, 1199, 1249, 1454
ApoI RAATTY 5 cut(s) 124, 483, 856, 909, 1219
Asp700I GAANNNNTTC 2 cut(s) 769, 821
Asp718I GGTACC 1 cut(s) 585
AspLEI GCGC 2 cut(s) 1012, 1478
AsuHPI GGTGA 4 cut(s) 98, 121, 266, 875
AsuNHI GCTAGC 1 cut(s) 308
BanI GGYRCC 1 cut(s) 585
BanII GRGCYC 1 cut(s) 1022
BbsI GAAGAC 1 cut(s) 626
Bbv12I GWGCWC 1 cut(s) 1022
BbvI GCAGC 8 cut(s) 253, 359, 439, 541, 1019, 1211, 1261, 1441
BccI CCATC 6 cut(s) 143, 607, 1303, 1645, 1690, 1737
BciT130I CCWGG 6 cut(s) 60, 93, 795, 831, 1004, 1470
BclI TGATCA 3 cut(s) 945, 1162, 1483
BfaI CTAG 7 cut(s) 107, 165, 309, 689, 887, 1112, 1885
BfoI RGCGCY 1 cut(s) 1013
BglII AGATCT 2 cut(s) 151, 205
Bme1390I CCNGG 6 cut(s) 60, 93, 795, 831, 1004, 1470
BmgBI CACGTC 1 cut(s) 934
BmiI GGNNCC 3 cut(s) 28, 587, 1749
BmrFI CCNGG 6 cut(s) 60, 93, 795, 831, 1004, 1470
BmsI GCATC 4 cut(s) 660, 964, 1096, 1694
BmtI GCTAGC 1 cut(s) 312
BpiI GAAGAC 1 cut(s) 626
BplI GAGNNNNNCTC 4 cut(s) 1112, 1144, 1539, 1571
BpuEI CTTGAG 3 cut(s) 650, 1320, 1613
BsaAI YACGTR 1 cut(s) 719
BsaHI GRCGYC 1 cut(s) 170
BsaJI CCNNGG 5 cut(s) 59, 456, 711, 829, 1865
BsaXI ACNNNNNCTCC 2 cut(s) 775, 805
Bsc4I CCNNNNNNNGG 2 cut(s) 59, 98
Bse1I ACTGG 4 cut(s) 103, 192, 387, 1495
Bse3DI GCAATG 1 cut(s) 1581
BseBI CCWGG 6 cut(s) 60, 93, 795, 831, 1004, 1470
BseDI CCNNGG 5 cut(s) 59, 456, 711, 829, 1865
BseGI GGATG 4 cut(s) 1144, 1165, 1395, 1593
BseLI CCNNNNNNNGG 2 cut(s) 59, 98
BseMI GCAATG 1 cut(s) 1581
BseMII CTCAG 1 cut(s) 1020
BseNI ACTGG 4 cut(s) 103, 192, 387, 1495
BseRI GAGGAG 2 cut(s) 537, 1822
BseX3I CGGCCG 1 cut(s) 728
BseXI GCAGC 8 cut(s) 253, 359, 439, 541, 1019, 1211, 1261, 1441
Bsh1236I CGCG 2 cut(s) 458, 1372
Bsh1285I CGRYCG 1 cut(s) 731
BshFI GGCC 2 cut(s) 730, 769
BshNI GGYRCC 1 cut(s) 585
BsiEI CGRYCG 1 cut(s) 731
BsiHKAI GWGCWC 1 cut(s) 1022
BslFI GGGAC 1 cut(s) 341
BslI CCNNNNNNNGG 2 cut(s) 59, 98
BsmFI GGGAC 1 cut(s) 341
BsmI GAATGC 1 cut(s) 845
BsnI GGCC 2 cut(s) 730, 769
Bsp1286I GDGCHC 1 cut(s) 1022
Bsp1407I TGTACA 1 cut(s) 5
Bsp143I GATC 9 cut(s) 88, 151, 205, 289, 464, 945, 1162, 1483, 1736
Bsp19I CCATGG 1 cut(s) 1865
BspACI CCGC 5 cut(s) 78, 456, 458, 744, 1710
BspANI GGCC 2 cut(s) 730, 769
BspCNI CTCAG 1 cut(s) 1021
BspFNI CGCG 2 cut(s) 458, 1372
BspHI TCATGA 1 cut(s) 813
BspLI GGNNCC 3 cut(s) 28, 587, 1749
BspOI GCTAGC 1 cut(s) 312
BspPI GGATC 3 cut(s) 83, 472, 1744
BspQI GCTCTTC 2 cut(s) 1245, 1347
BspT107I GGYRCC 1 cut(s) 585
BsrDI GCAATG 1 cut(s) 1581
BsrGI TGTACA 1 cut(s) 5
BsrI ACTGG 4 cut(s) 103, 192, 387, 1495
BssECI CCNNGG 5 cut(s) 59, 456, 711, 829, 1865
BssMI GATC 9 cut(s) 88, 151, 205, 289, 464, 945, 1162, 1483, 1736
BssNAI GTATAC 1 cut(s) 1466
BssNI GRCGYC 1 cut(s) 170
BssT1I CCWWGG 2 cut(s) 711, 1865
Bst1107I GTATAC 1 cut(s) 1466
Bst2UI CCWGG 6 cut(s) 60, 93, 795, 831, 1004, 1470
Bst4CI ACNGT 4 cut(s) 334, 570, 684, 1441
Bst6I CTCTTC 4 cut(s) 1245, 1347, 1570, 1676
BstACI GRCGYC 1 cut(s) 170
BstAUI TGTACA 1 cut(s) 5
BstBAI YACGTR 1 cut(s) 719
BstC8I GCNNGC 4 cut(s) 227, 310, 1415, 1496
BstDEI CTNAG 1 cut(s) 1029
BstDSI CCRYGG 2 cut(s) 456, 1865
BstF5I GGATG 4 cut(s) 1144, 1165, 1395, 1593
BstFNI CGCG 2 cut(s) 458, 1372
BstH2I RGCGCY 1 cut(s) 1013
BstHHI GCGC 2 cut(s) 1012, 1478
BstKTI GATC 9 cut(s) 91, 154, 208, 292, 467, 948, 1165, 1486, 1739
BstMBI GATC 9 cut(s) 88, 151, 205, 289, 464, 945, 1162, 1483, 1736
BstMCI CGRYCG 1 cut(s) 731
BstMWI GCNNNNNNNGC 5 cut(s) 353, 458, 875, 1199, 1793
BstNI CCWGG 6 cut(s) 60, 93, 795, 831, 1004, 1470
BstNSI RCATGY 2 cut(s) 50, 365
BstSCI CCNGG 6 cut(s) 58, 91, 793, 829, 1002, 1468
BstUI CGCG 2 cut(s) 458, 1372
BstV1I GCAGC 8 cut(s) 253, 359, 439, 541, 1019, 1211, 1261, 1441
BstV2I GAAGAC 1 cut(s) 626
BstX2I RGATCY 2 cut(s) 151, 205
BstXI CCANNNNNNTGG 1 cut(s) 801
BstYI RGATCY 2 cut(s) 151, 205
BstZ17I GTATAC 1 cut(s) 1466
BstZI CGGCCG 1 cut(s) 728
BsuRI GGCC 2 cut(s) 730, 769
BtgI CCRYGG 2 cut(s) 456, 1865
BtrI CACGTC 1 cut(s) 934
BtsCI GGATG 4 cut(s) 1144, 1165, 1395, 1593
BtsI GCAGTG 2 cut(s) 435, 1398
BtsIMutI CAGTG 4 cut(s) 330, 435, 1347, 1398
Cac8I GCNNGC 4 cut(s) 227, 310, 1415, 1496
CaiI CAGNNNCTG 1 cut(s) 98
CciI TCATGA 1 cut(s) 813
CfoI GCGC 2 cut(s) 1012, 1478
Cfr42I CCGCGG 1 cut(s) 459
CseI GACGC 2 cut(s) 178, 1361
CsiI ACCWGGT 1 cut(s) 1468
Csp6I GTAC 5 cut(s) 6, 50, 586, 592, 720
CspCI CAANNNNNGTGG 2 cut(s) 1414, 1449
CviQI GTAC 5 cut(s) 6, 50, 586, 592, 720
DdeI CTNAG 1 cut(s) 1029
DpnI GATC 9 cut(s) 90, 153, 207, 291, 466, 947, 1164, 1485, 1738
DpnII GATC 9 cut(s) 88, 151, 205, 289, 464, 945, 1162, 1483, 1736
DraI TTTAAA 1 cut(s) 861
DraIII CACNNNGTG 1 cut(s) 373
EaeI YGGCCR 1 cut(s) 728
EagI CGGCCG 1 cut(s) 728
Eam1104I CTCTTC 4 cut(s) 1245, 1347, 1570, 1676
EarI CTCTTC 4 cut(s) 1245, 1347, 1570, 1676
Ecl136II GAGCTC 1 cut(s) 1020
EclXI CGGCCG 1 cut(s) 728
Eco130I CCWWGG 2 cut(s) 711, 1865
Eco147I AGGCCT 1 cut(s) 769
Eco24I GRGCYC 1 cut(s) 1022
Eco47III AGCGCT 1 cut(s) 1011
Eco52I CGGCCG 1 cut(s) 728
Eco53kI GAGCTC 1 cut(s) 1020
Eco57I CTGAAG 2 cut(s) 756, 1371
EcoICRI GAGCTC 1 cut(s) 1020
EcoRII CCWGG 6 cut(s) 58, 91, 793, 829, 1002, 1468
EcoT14I CCWWGG 2 cut(s) 711, 1865
EcoT22I ATGCAT 2 cut(s) 847, 1798
EcoT38I GRGCYC 1 cut(s) 1022
ErhI CCWWGG 2 cut(s) 711, 1865
FalI AAGNNNNNCTT 2 cut(s) 1487, 1519
FaqI GGGAC 1 cut(s) 341
FauNDI CATATG 1 cut(s) 1185
FbaI TGATCA 3 cut(s) 945, 1162, 1483
FblI GTMKAC 3 cut(s) 471, 808, 1465
FokI GGATG 4 cut(s) 1151, 1172, 1402, 1580
FriOI GRGCYC 1 cut(s) 1022
FspBI CTAG 7 cut(s) 107, 165, 309, 689, 887, 1112, 1885
GlaI GCGC 2 cut(s) 1011, 1477
HaeII RGCGCY 1 cut(s) 1013
HaeIII GGCC 2 cut(s) 730, 769
HgaI GACGC 2 cut(s) 178, 1361
HhaI GCGC 2 cut(s) 1012, 1478
Hin1I GRCGYC 1 cut(s) 170
Hin6I GCGC 2 cut(s) 1010, 1476
HinP1I GCGC 2 cut(s) 1010, 1476
HincII GTYRAC 1 cut(s) 1368
HindII GTYRAC 1 cut(s) 1368
HindIII AAGCTT 1 cut(s) 1518
HinfI GANTC 5 cut(s) 64, 503, 784, 810, 1659
HpaI GTTAAC 1 cut(s) 1368
HphI GGTGA 4 cut(s) 98, 121, 266, 875
Hpy166II GTNNAC 7 cut(s) 6, 8, 367, 472, 809, 1368, 1466
Hpy188I TCNGA 2 cut(s) 531, 574
Hpy188III TCNNGA 6 cut(s) 280, 318, 814, 1028, 1337, 1740
Hpy8I GTNNAC 7 cut(s) 6, 8, 367, 472, 809, 1368, 1466
Hpy99I CGWCG 1 cut(s) 1547
HpyAV CCTTC 4 cut(s) 183, 759, 780, 1387
HpyCH4III ACNGT 4 cut(s) 334, 570, 684, 1441
HpyCH4IV ACGT 3 cut(s) 718, 933, 1364
HpyF10VI GCNNNNNNNGC 5 cut(s) 353, 458, 875, 1199, 1793
HpyF3I CTNAG 1 cut(s) 1029
HpySE526I ACGT 3 cut(s) 718, 933, 1364
Hsp92I GRCGYC 1 cut(s) 170
HspAI GCGC 2 cut(s) 1010, 1476
KpnI GGTACC 1 cut(s) 589
Ksp22I TGATCA 3 cut(s) 945, 1162, 1483
KspAI GTTAAC 1 cut(s) 1368
KspI CCGCGG 1 cut(s) 459
Kzo9I GATC 9 cut(s) 88, 151, 205, 289, 464, 945, 1162, 1483, 1736
LguI GCTCTTC 2 cut(s) 1245, 1347
LmnI GCTCC 1 cut(s) 353
Lsp1109I GCAGC 8 cut(s) 253, 359, 439, 541, 1019, 1211, 1261, 1441
LweI GCATC 4 cut(s) 660, 964, 1096, 1694
MabI ACCWGGT 1 cut(s) 1468
MaeI CTAG 7 cut(s) 107, 165, 309, 689, 887, 1112, 1885
MaeII ACGT 3 cut(s) 718, 933, 1364
MaeIII GTNAC 1 cut(s) 1147
MalI GATC 9 cut(s) 90, 153, 207, 291, 466, 947, 1164, 1485, 1738
MboI GATC 9 cut(s) 88, 151, 205, 289, 464, 945, 1162, 1483, 1736
MfeI CAATTG 1 cut(s) 1773
MflI RGATCY 2 cut(s) 151, 205
MhlI GDGCHC 1 cut(s) 1022
MluI ACGCGT 1 cut(s) 1370
MlyI GAGTC 3 cut(s) 793, 804, 1653
MmeI TCCRAC 1 cut(s) 916
Mph1103I ATGCAT 2 cut(s) 847, 1798
MroXI GAANNNNTTC 2 cut(s) 769, 821
MseI TTAA 4 cut(s) 837, 860, 965, 1367
MslI CAYNNNNRTG 1 cut(s) 1092
MspA1I CMGCKG 2 cut(s) 458, 1454
MspR9I CCNGG 6 cut(s) 60, 93, 795, 831, 1004, 1470
MunI CAATTG 1 cut(s) 1773
Mva1269I GAATGC 1 cut(s) 845
MvaI CCWGG 6 cut(s) 60, 93, 795, 831, 1004, 1470
MvnI CGCG 2 cut(s) 458, 1372
MwoI GCNNNNNNNGC 5 cut(s) 353, 458, 875, 1199, 1793
NcoI CCATGG 1 cut(s) 1865
NdeI CATATG 1 cut(s) 1185
NdeII GATC 9 cut(s) 88, 151, 205, 289, 464, 945, 1162, 1483, 1736
NheI GCTAGC 1 cut(s) 308
NlaIV GGNNCC 3 cut(s) 28, 587, 1749
NmuCI GTSAC 1 cut(s) 1147
NsiI ATGCAT 2 cut(s) 847, 1798
NspI RCATGY 2 cut(s) 50, 365
PagI TCATGA 1 cut(s) 813
PceI AGGCCT 1 cut(s) 769
PciI ACATGT 2 cut(s) 46, 361
PciSI GCTCTTC 2 cut(s) 1245, 1347
PctI GAATGC 1 cut(s) 845
PdmI GAANNNNTTC 2 cut(s) 769, 821
PfeI GAWTC 2 cut(s) 64, 503
PflFI GACNNNGTC 1 cut(s) 476
PflMI CCANNNNNTGG 2 cut(s) 59, 98
PfoI TCCNGGA 2 cut(s) 91, 793
PleI GAGTC 3 cut(s) 792, 804, 1653
PpsI GAGTC 3 cut(s) 792, 804, 1653
Ppu21I YACGTR 1 cut(s) 719
PscI ACATGT 2 cut(s) 46, 361
Psp124BI GAGCTC 1 cut(s) 1022
Psp6I CCWGG 6 cut(s) 58, 91, 793, 829, 1002, 1468
PspGI CCWGG 6 cut(s) 58, 91, 793, 829, 1002, 1468
PspN4I GGNNCC 3 cut(s) 28, 587, 1749
PstNI CAGNNNCTG 1 cut(s) 98
PsuI RGATCY 2 cut(s) 151, 205
PsyI GACNNNGTC 1 cut(s) 476
PvuII CAGCTG 1 cut(s) 1454
RsaI GTAC 5 cut(s) 7, 51, 587, 593, 721
RsaNI GTAC 5 cut(s) 6, 50, 586, 592, 720
RseI CAYNNNNRTG 1 cut(s) 1092
SacI GAGCTC 1 cut(s) 1022
SacII CCGCGG 1 cut(s) 459
SapI GCTCTTC 2 cut(s) 1245, 1347
SaqAI TTAA 4 cut(s) 837, 860, 965, 1367
Sau3AI GATC 9 cut(s) 88, 151, 205, 289, 464, 945, 1162, 1483, 1736
SchI GAGTC 3 cut(s) 793, 804, 1653
ScrFI CCNGG 6 cut(s) 60, 93, 795, 831, 1004, 1470
SduI GDGCHC 1 cut(s) 1022
SexAI ACCWGGT 1 cut(s) 1468
SfaNI GCATC 4 cut(s) 660, 964, 1096, 1694
Sfr303I CCGCGG 1 cut(s) 459
SgrBI CCGCGG 1 cut(s) 459
SmiI ATTTAAAT 1 cut(s) 861
SmiMI CAYNNNNRTG 1 cut(s) 1092
SmlI CTYRAG 3 cut(s) 629, 1335, 1628
SmoI CTYRAG 3 cut(s) 629, 1335, 1628
SseBI AGGCCT 1 cut(s) 769
SsiI CCGC 5 cut(s) 78, 456, 458, 744, 1710
SspI AATATT 1 cut(s) 969
SspMI CTAG 7 cut(s) 107, 165, 309, 689, 887, 1112, 1885
SstI GAGCTC 1 cut(s) 1022
StuI AGGCCT 1 cut(s) 769
StyD4I CCNGG 6 cut(s) 58, 91, 793, 829, 1002, 1468
StyI CCWWGG 2 cut(s) 711, 1865
SwaI ATTTAAAT 1 cut(s) 861
TaaI ACNGT 4 cut(s) 334, 570, 684, 1441
TaiI ACGT 3 cut(s) 721, 936, 1367
TaqI TCGA 5 cut(s) 138, 292, 520, 763, 1060
TatI WGTACW 1 cut(s) 5
TauI GCSGC 2 cut(s) 458, 461
TfiI GAWTC 2 cut(s) 64, 503
Tru1I TTAA 4 cut(s) 837, 860, 965, 1367
Tru9I TTAA 4 cut(s) 837, 860, 965, 1367
TscAI CASTG 4 cut(s) 337, 442, 1354, 1405
TseFI GTSAC 1 cut(s) 1147
TseI GCWGC 8 cut(s) 266, 347, 452, 554, 1007, 1199, 1249, 1454
Tsp45I GTSAC 1 cut(s) 1147
TspDTI ATGAA 9 cut(s) 170, 233, 329, 830, 1065, 1398, 1406, 1582, 1663
TspGWI ACGGA 1 cut(s) 1560
TspRI CASTG 4 cut(s) 337, 442, 1354, 1405
Tth111I GACNNNGTC 1 cut(s) 476
Van91I CCANNNNNTGG 2 cut(s) 59, 98
XapI RAATTY 5 cut(s) 124, 483, 856, 909, 1219
XceI RCATGY 2 cut(s) 50, 365
XcmI CCANNNNNNNNNTGG 2 cut(s) 142, 425
XmiI GTMKAC 3 cut(s) 471, 808, 1465
XmnI GAANNNNTTC 2 cut(s) 769, 821
XspI CTAG 7 cut(s) 107, 165, 309, 689, 887, 1112, 1885
Zsp2I ATGCAT 2 cut(s) 847, 1798
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.