Rorug05G0222400

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000157
Physical Location & Seq
Reverse (-)
23033289 .. 23038562
5274 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0222400.1

Sequence Viewer

Length: 1383 bp
ATGAGACCTCATCATCAGCTTCTTCCCCAGCCCTCCAAGTCAAGCCCACCAGCCGTAGAAGACCCCGCCGGATCCCACCGTCCACCCGCCGCCGGGTCAGTGGGCCTTCTTGGGCCCAGGAAGAAAGGGACCAAGGCTACAACAAGTGTTCGTGCGTGGCTGCTGATTGACTCCGAAGGCAACTCTCAAGTTTTGGAGGCCGGAAAACACGCCATCATGCGGCGCACGGGTCTGCCGGCCCGGGACCTCCGGATCCTCGACCCGGTTCTGCGGTGCCCGTCGACGGTGCTAGGGAGAGAGAGAGCTATTGTTATAAACCTGGAACACATCAAGGCCATCATCACTGCCCAGGAGGTCTTGCTGGTCAACTCCGCTGACCTTTCTGTCACGCCGTTCGTTGACGAGCTTCGACGTAGGCTGGTCCGCCATCAACAAGCAACCACCATAGCTTCGGAGGGTAATGATGATGGTCATACAAAGTTGCATGATTTGGGAGAGTCGCGTCAGAATTCTCCAAGTGGTCAACATGATGGAGTAGGGAAAGAAGTTGTGAAGAAGCAATTATATGGATCAAAGGTTCTTAGCTTTGAGTTTGTAGCACTGGAGACTTGTCTTGAGGCTGCTTGCACTTCCTTAGAAAATGAAGCAAAGGGATTGGAGAAAGAAGCTCATCCAGCTTTGGAGAAGCTCAGTTCCAAGATTAGTACTTTGAATTTAGAACGTGTCCGCCAAATCAAAAGCCGCTTGGTTGCTATATCAGGACGTGTCCAGAAGGTGAGGGATGAAATAGAACATTTGCTAGATGATGATGAAGATATGGCTGAGATGTATCTGACTGACAAGCTTTCTGTTGAGTCAGACCTAGAGAACTCTTCTGCTTCATCCATGAATGAGCAGATGAGAGATGAAATGGATGATGAAATTCATCAAGCAGCAGAAGTGGACGACAGGAACAGCGATACTGGTACAGGTACAAGCAAGCAGCTTGATGTTGAGGAGCTAGAAATGCTTTTGGAGGCATACTTTGTCCAAATTGATGGCACACTAAACAAGTTATCCACGCTGAGGGAGGATGTAGACGACACAGAGGATTACATTAACATAATGCTGGATGACAAACAGAATCAGCTGCTGCAGATGGGAGTCGTTTTATCCACAGCAACACTTGTGGTGAATGCATTTATCGTTGTTGCCGGGATCTTTGGCATGAATATAGGGATCGAACTGTTCGATGAAGAACTTAAAACAGGAAATAAGAAGTTCATGTGGACTATTGGTGGGAGTTCCATGGGGTGTGTATTCTTCTTTGTGATTGCCATTGCCTGGGGTAAGCATATGCGCTTGCTGGATATCCCATCACTGTTCTTTGTTTGCTCAAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

460

Amino Acids

50.86

Weight (kDa)

5.15

Isoelectric Point (pI)

39.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MRS2-like PF22099 56 - 141 3.3e-10 Magnesium transporter MRS2-like
MRS2-like PF22099 191 - 313 8.1e-16 Magnesium transporter MRS2-like
MRS2-like PF22099 327 - 372 4.6e-08 Magnesium transporter MRS2-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 314
AasI GACNNNNNNGTC 1 cut(s) 383
AccB1I GGYRCC 1 cut(s) 273
AccB7I CCANNNNNTGG 1 cut(s) 1323
AccI GTMKAC 2 cut(s) 281, 1077
AccII CGCG 1 cut(s) 502
AccIII TCCGGA 1 cut(s) 249
AciI CCGC 9 cut(s) 66, 87, 90, 220, 271, 372, 424, 727, 742
AclWI GGATC 7 cut(s) 66, 79, 247, 260, 577, 1205, 1226
AcsI RAATTY 3 cut(s) 508, 712, 921
AfaI GTAC 3 cut(s) 706, 967, 973
AfiI CCNNNNNNNGG 7 cut(s) 92, 93, 219, 262, 283, 1065, 1323
AflIII ACRYGT 2 cut(s) 721, 763
AgsI TTSAA 1 cut(s) 712
AjiI CACGTC 1 cut(s) 764
AjnI CCWGG 4 cut(s) 116, 318, 348, 1322
AloI GAACNNNNNNTCC 2 cut(s) 561, 593
Alw26I GTCTC 1 cut(s) 599
AlwI GGATC 7 cut(s) 66, 79, 247, 260, 577, 1205, 1226
AlwNI CAGNNNCTG 1 cut(s) 1132
Ama87I CYCGRG 1 cut(s) 240
Aor13HI TCCGGA 1 cut(s) 249
AoxI GGCC 5 cut(s) 103, 113, 198, 237, 333
ApaI GGGCCC 1 cut(s) 117
ApeKI GCWGC 6 cut(s) 160, 620, 932, 982, 1129, 1132
ApoI RAATTY 3 cut(s) 508, 712, 921
AspLEI GCGC 2 cut(s) 225, 1341
AspS9I GGNCC 7 cut(s) 103, 113, 114, 129, 238, 244, 421
AsuC2I CCSGG 5 cut(s) 94, 241, 242, 263, 1195
AsuHPI GGTGA 2 cut(s) 787, 1183
AvaI CYCGRG 1 cut(s) 240
AvaII GGWCC 3 cut(s) 129, 244, 421
BaeGI GKGCMC 2 cut(s) 117, 278
BamHI GGATCC 2 cut(s) 71, 252
BanI GGYRCC 1 cut(s) 273
BanII GRGCYC 1 cut(s) 117
BbsI GAAGAC 1 cut(s) 66
BbvCI CCTCAGC 1 cut(s) 1064
BbvI GCAGC 6 cut(s) 147, 607, 944, 994, 1116, 1119
BccI CCATC 8 cut(s) 221, 344, 435, 461, 524, 1031, 1132, 1363
BceAI ACGGC 2 cut(s) 38, 376
BciT130I CCWGG 4 cut(s) 118, 320, 350, 1324
BcnI CCSGG 5 cut(s) 94, 241, 242, 263, 1195
BcoDI GTCTC 1 cut(s) 599
BfaI CTAG 4 cut(s) 290, 800, 863, 1001
BfmI CTRYAG 1 cut(s) 1133
BisI GCNGC 9 cut(s) 90, 161, 221, 621, 742, 933, 983, 1130, 1133
BlsI GCNGC 9 cut(s) 91, 162, 222, 622, 743, 934, 984, 1131, 1134
BmcAI AGTACT 1 cut(s) 706
Bme1390I CCNGG 9 cut(s) 94, 118, 241, 242, 263, 320, 350, 1195, 1324
Bme18I GGWCC 3 cut(s) 129, 244, 421
BmeT110I CYCGRG 1 cut(s) 240
BmgBI CACGTC 1 cut(s) 764
BmgT120I GGNCC 7 cut(s) 103, 113, 114, 129, 238, 244, 421
BmiI GGNNCC 6 cut(s) 73, 115, 130, 245, 254, 275
BmrFI CCNGG 9 cut(s) 94, 118, 241, 242, 263, 320, 350, 1195, 1324
BpiI GAAGAC 1 cut(s) 66
BpmI CTGGAG 1 cut(s) 623
Bpu10I CCTNAGC 1 cut(s) 1064
BpuEI CTTGAG 3 cut(s) 171, 635, 1360
BpuMI CCSGG 5 cut(s) 94, 241, 242, 263, 1195
BsaJI CCNNGG 6 cut(s) 116, 132, 240, 348, 1287, 1323
BsaWI WCCGGW 1 cut(s) 249
Bsc4I CCNNNNNNNGG 7 cut(s) 92, 93, 219, 262, 283, 1065, 1323
Bse118I RCCGGY 1 cut(s) 235
Bse1I ACTGG 2 cut(s) 606, 967
Bse3DI GCAATG 1 cut(s) 1317
BseAI TCCGGA 1 cut(s) 249
BseBI CCWGG 4 cut(s) 118, 320, 350, 1324
BseDI CCNNGG 6 cut(s) 116, 132, 240, 348, 1287, 1323
BseGI GGATG 6 cut(s) 670, 787, 881, 919, 1078, 1117
BseLI CCNNNNNNNGG 7 cut(s) 92, 93, 219, 262, 283, 1065, 1323
BseMI GCAATG 1 cut(s) 1317
BseMII CTCAG 3 cut(s) 703, 813, 1055
BseNI ACTGG 2 cut(s) 606, 967
BseRI GAGGAG 1 cut(s) 1010
BseSI GKGCMC 2 cut(s) 117, 278
BseXI GCAGC 6 cut(s) 147, 607, 944, 994, 1116, 1119
BseYI CCCAGC 1 cut(s) 27
Bsh1236I CGCG 1 cut(s) 502
BshFI GGCC 5 cut(s) 105, 115, 200, 239, 335
BshNI GGYRCC 1 cut(s) 273
BsiHKCI CYCGRG 1 cut(s) 240
BsiSI CCGG 8 cut(s) 69, 93, 201, 236, 241, 250, 263, 1194
BslFI GGGAC 2 cut(s) 142, 257
BslI CCNNNNNNNGG 7 cut(s) 92, 93, 219, 262, 283, 1065, 1323
BsmAI GTCTC 1 cut(s) 599
BsmFI GGGAC 2 cut(s) 142, 257
BsmI GAATGC 1 cut(s) 1180
BsnI GGCC 5 cut(s) 105, 115, 200, 239, 335
BsoBI CYCGRG 1 cut(s) 240
Bsp120I GGGCCC 1 cut(s) 113
Bsp1286I GDGCHC 2 cut(s) 117, 278
Bsp13I TCCGGA 1 cut(s) 249
Bsp143I GATC 5 cut(s) 71, 252, 569, 1197, 1218
Bsp19I CCATGG 1 cut(s) 1287
BspACI CCGC 9 cut(s) 66, 87, 90, 220, 271, 372, 424, 727, 742
BspANI GGCC 5 cut(s) 105, 115, 200, 239, 335
BspCNI CTCAG 3 cut(s) 702, 814, 1056
BspEI TCCGGA 1 cut(s) 249
BspFNI CGCG 1 cut(s) 502
BspLI GGNNCC 6 cut(s) 73, 115, 130, 245, 254, 275
BspMAI CTGCAG 1 cut(s) 1137
BspPI GGATC 7 cut(s) 66, 79, 247, 260, 577, 1205, 1226
BspT107I GGYRCC 1 cut(s) 273
BsrDI GCAATG 1 cut(s) 1317
BsrFI RCCGGY 1 cut(s) 235
BsrI ACTGG 2 cut(s) 606, 967
BssAI RCCGGY 1 cut(s) 235
BssECI CCNNGG 6 cut(s) 116, 132, 240, 348, 1287, 1323
BssMI GATC 5 cut(s) 71, 252, 569, 1197, 1218
BssT1I CCWWGG 2 cut(s) 132, 1287
Bst2UI CCWGG 4 cut(s) 118, 320, 350, 1324
Bst4CI ACNGT 4 cut(s) 80, 286, 1227, 1362
Bst6I CTCTTC 1 cut(s) 877
BstC8I GCNNGC 4 cut(s) 237, 625, 980, 1343
BstDEI CTNAG 5 cut(s) 581, 634, 689, 822, 1064
BstDSI CCRYGG 1 cut(s) 1287
BstF5I GGATG 6 cut(s) 670, 787, 881, 919, 1078, 1117
BstFNI CGCG 1 cut(s) 502
BstHHI GCGC 2 cut(s) 225, 1341
BstKTI GATC 5 cut(s) 74, 255, 572, 1200, 1221
BstMAI GTCTC 1 cut(s) 599
BstMBI GATC 5 cut(s) 71, 252, 569, 1197, 1218
BstMWI GCNNNNNNNGC 2 cut(s) 674, 1006
BstNI CCWGG 4 cut(s) 118, 320, 350, 1324
BstSCI CCNGG 9 cut(s) 92, 116, 239, 240, 261, 318, 348, 1193, 1322
BstSFI CTRYAG 1 cut(s) 1133
BstSLI GKGCMC 2 cut(s) 117, 278
BstUI CGCG 1 cut(s) 502
BstV1I GCAGC 6 cut(s) 147, 607, 944, 994, 1116, 1119
BstV2I GAAGAC 1 cut(s) 66
BstX2I RGATCY 3 cut(s) 71, 252, 1197
BstXI CCANNNNNNTGG 1 cut(s) 1037
BstYI RGATCY 3 cut(s) 71, 252, 1197
BsuRI GGCC 5 cut(s) 105, 115, 200, 239, 335
BtgI CCRYGG 1 cut(s) 1287
BtrI CACGTC 1 cut(s) 764
BtsCI GGATG 6 cut(s) 670, 787, 881, 919, 1078, 1117
BtsI GCAGTG 1 cut(s) 342
BtsIMutI CAGTG 4 cut(s) 105, 342, 599, 1358
Cac8I GCNNGC 4 cut(s) 237, 625, 980, 1343
CaiI CAGNNNCTG 1 cut(s) 1132
CfoI GCGC 2 cut(s) 225, 1341
Cfr10I RCCGGY 1 cut(s) 235
Cfr13I GGNCC 7 cut(s) 103, 113, 114, 129, 238, 244, 421
Cfr9I CCCGGG 1 cut(s) 240
CseI GACGC 1 cut(s) 491
Csp6I GTAC 3 cut(s) 705, 966, 972
CspCI CAANNNNNGTGG 2 cut(s) 1149, 1184
CviAII CATG 7 cut(s) 217, 485, 527, 886, 1207, 1264, 1288
CviQI GTAC 3 cut(s) 705, 966, 972
DdeI CTNAG 5 cut(s) 581, 634, 689, 822, 1064
DpnI GATC 5 cut(s) 73, 254, 571, 1199, 1220
DpnII GATC 5 cut(s) 71, 252, 569, 1197, 1218
DrdI GACNNNNNNGTC 1 cut(s) 383
DseDI GACNNNNNNGTC 1 cut(s) 383
Eam1104I CTCTTC 1 cut(s) 877
EarI CTCTTC 1 cut(s) 877
EciI GGCGGA 2 cut(s) 413, 716
Eco130I CCWWGG 2 cut(s) 132, 1287
Eco24I GRGCYC 1 cut(s) 117
Eco32I GATATC 1 cut(s) 1351
Eco47I GGWCC 3 cut(s) 129, 244, 421
Eco88I CYCGRG 1 cut(s) 240
EcoO109I RGGNCCY 1 cut(s) 244
EcoRI GAATTC 1 cut(s) 508
EcoRII CCWGG 4 cut(s) 116, 318, 348, 1322
EcoRV GATATC 1 cut(s) 1351
EcoT14I CCWWGG 2 cut(s) 132, 1287
EcoT22I ATGCAT 1 cut(s) 1180
EcoT38I GRGCYC 1 cut(s) 117
ErhI CCWWGG 2 cut(s) 132, 1287
FaeI CATG 7 cut(s) 220, 488, 530, 889, 1210, 1267, 1291
FaqI GGGAC 2 cut(s) 142, 257
FatI CATG 7 cut(s) 216, 484, 526, 885, 1206, 1263, 1287
FauI CCCGC 2 cut(s) 73, 94
FauNDI CATATG 1 cut(s) 1335
FblI GTMKAC 2 cut(s) 281, 1077
Fnu4HI GCNGC 9 cut(s) 90, 161, 221, 621, 742, 933, 983, 1130, 1133
FokI GGATG 6 cut(s) 657, 794, 868, 926, 1085, 1124
FriOI GRGCYC 1 cut(s) 117
Fsp4HI GCNGC 9 cut(s) 90, 161, 221, 621, 742, 933, 983, 1130, 1133
FspBI CTAG 4 cut(s) 290, 800, 863, 1001
GlaI GCGC 2 cut(s) 224, 1340
GluI GCNGC 9 cut(s) 90, 161, 221, 621, 742, 933, 983, 1130, 1133
GsaI CCCAGC 1 cut(s) 31
GsuI CTGGAG 1 cut(s) 623
HaeIII GGCC 5 cut(s) 105, 115, 200, 239, 335
HapII CCGG 8 cut(s) 69, 93, 201, 236, 241, 250, 263, 1194
HgaI GACGC 1 cut(s) 491
HhaI GCGC 2 cut(s) 225, 1341
Hin1II CATG 7 cut(s) 220, 488, 530, 889, 1210, 1267, 1291
Hin6I GCGC 2 cut(s) 223, 1339
HinP1I GCGC 2 cut(s) 223, 1339
HincII GTYRAC 4 cut(s) 282, 367, 400, 524
HindII GTYRAC 4 cut(s) 282, 367, 400, 524
HindIII AAGCTT 1 cut(s) 842
HinfI GANTC 5 cut(s) 170, 497, 854, 1123, 1143
HpaII CCGG 8 cut(s) 69, 93, 201, 236, 241, 250, 263, 1194
HphI GGTGA 2 cut(s) 787, 1183
Hpy166II GTNNAC 8 cut(s) 83, 282, 367, 400, 524, 943, 1078, 1269
Hpy188I TCNGA 5 cut(s) 175, 454, 507, 834, 859
Hpy188III TCNNGA 4 cut(s) 250, 614, 759, 769
Hpy8I GTNNAC 8 cut(s) 83, 282, 367, 400, 524, 943, 1078, 1269
Hpy99I CGWCG 3 cut(s) 283, 286, 414
HpyAV CCTTC 3 cut(s) 116, 170, 766
HpyCH4III ACNGT 4 cut(s) 80, 286, 1227, 1362
HpyCH4IV ACGT 3 cut(s) 412, 721, 763
HpyCH4V TGCA 4 cut(s) 484, 627, 1135, 1178
HpyF10VI GCNNNNNNNGC 2 cut(s) 674, 1006
HpyF3I CTNAG 5 cut(s) 581, 634, 689, 822, 1064
HpySE526I ACGT 3 cut(s) 412, 721, 763
Hsp92II CATG 7 cut(s) 220, 488, 530, 889, 1210, 1267, 1291
HspAI GCGC 2 cut(s) 223, 1339
Kpn2I TCCGGA 1 cut(s) 249
KroI GCCGGC 1 cut(s) 235
KroNI GCCGGC 1 cut(s) 237
Kzo9I GATC 5 cut(s) 71, 252, 569, 1197, 1218
LmnI GCTCC 1 cut(s) 997
Lsp1109I GCAGC 6 cut(s) 147, 607, 944, 994, 1116, 1119
MaeI CTAG 4 cut(s) 290, 800, 863, 1001
MaeII ACGT 3 cut(s) 412, 721, 763
MaeIII GTNAC 1 cut(s) 385
MalI GATC 5 cut(s) 73, 254, 571, 1199, 1220
MboI GATC 5 cut(s) 71, 252, 569, 1197, 1218
MboII GAAGA 8 cut(s) 14, 71, 133, 565, 824, 864, 1247, 1294
MflI RGATCY 3 cut(s) 71, 252, 1197
MhlI GDGCHC 2 cut(s) 117, 278
MluCI AATT 5 cut(s) 508, 560, 712, 921, 1032
MlyI GAGTC 4 cut(s) 164, 506, 863, 1152
Mph1103I ATGCAT 1 cut(s) 1180
MroI TCCGGA 1 cut(s) 249
MroNI GCCGGC 1 cut(s) 235
MseI TTAA 2 cut(s) 1098, 1242
MspA1I CMGCKG 2 cut(s) 374, 1129
MspI CCGG 8 cut(s) 69, 93, 201, 236, 241, 250, 263, 1194
MspR9I CCNGG 9 cut(s) 94, 118, 241, 242, 263, 320, 350, 1195, 1324
Mva1269I GAATGC 1 cut(s) 1180
MvaI CCWGG 4 cut(s) 118, 320, 350, 1324
MvnI CGCG 1 cut(s) 502
MwoI GCNNNNNNNGC 2 cut(s) 674, 1006
NaeI GCCGGC 1 cut(s) 237
NciI CCSGG 5 cut(s) 94, 241, 242, 263, 1195
NcoI CCATGG 1 cut(s) 1287
NdeI CATATG 1 cut(s) 1335
NdeII GATC 5 cut(s) 71, 252, 569, 1197, 1218
NgoMIV GCCGGC 1 cut(s) 235
NlaIII CATG 7 cut(s) 220, 488, 530, 889, 1210, 1267, 1291
NlaIV GGNNCC 6 cut(s) 73, 115, 130, 245, 254, 275
NmuCI GTSAC 1 cut(s) 385
NsiI ATGCAT 1 cut(s) 1180
PcsI WCGNNNNNNNCGW 1 cut(s) 1227
PctI GAATGC 1 cut(s) 1180
PdiI GCCGGC 1 cut(s) 237
PfeI GAWTC 1 cut(s) 1123
PflMI CCANNNNNTGG 1 cut(s) 1323
PkrI GCNGC 9 cut(s) 91, 162, 222, 622, 743, 934, 984, 1131, 1134
PleI GAGTC 4 cut(s) 164, 505, 862, 1151
PpsI GAGTC 4 cut(s) 164, 505, 862, 1151
PpuMI RGGWCCY 1 cut(s) 244
PsiI TTATAA 1 cut(s) 314
Psp5II RGGWCCY 1 cut(s) 244
Psp6I CCWGG 4 cut(s) 116, 318, 348, 1322
PspFI CCCAGC 1 cut(s) 27
PspGI CCWGG 4 cut(s) 116, 318, 348, 1322
PspN4I GGNNCC 6 cut(s) 73, 115, 130, 245, 254, 275
PspOMI GGGCCC 1 cut(s) 113
PspPI GGNCC 7 cut(s) 103, 113, 114, 129, 238, 244, 421
PspPPI RGGWCCY 1 cut(s) 244
PstI CTGCAG 1 cut(s) 1137
PstNI CAGNNNCTG 1 cut(s) 1132
PsuI RGATCY 3 cut(s) 71, 252, 1197
PvuII CAGCTG 1 cut(s) 1129
RsaI GTAC 3 cut(s) 706, 967, 973
RsaNI GTAC 3 cut(s) 705, 966, 972
SalI GTCGAC 1 cut(s) 280
SaqAI TTAA 2 cut(s) 1098, 1242
SatI GCNGC 9 cut(s) 90, 161, 221, 621, 742, 933, 983, 1130, 1133
Sau3AI GATC 5 cut(s) 71, 252, 569, 1197, 1218
Sau96I GGNCC 7 cut(s) 103, 113, 114, 129, 238, 244, 421
ScaI AGTACT 1 cut(s) 706
SchI GAGTC 4 cut(s) 164, 506, 863, 1152
ScrFI CCNGG 9 cut(s) 94, 118, 241, 242, 263, 320, 350, 1195, 1324
SduI GDGCHC 2 cut(s) 117, 278
SfcI CTRYAG 1 cut(s) 1133
SgrDI CGTCGACG 1 cut(s) 280
SinI GGWCC 3 cut(s) 129, 244, 421
SmaI CCCGGG 1 cut(s) 242
SmlI CTYRAG 3 cut(s) 186, 614, 1375
SmoI CTYRAG 3 cut(s) 186, 614, 1375
Sse9I AATT 5 cut(s) 508, 560, 712, 921, 1032
SsiI CCGC 9 cut(s) 66, 87, 90, 220, 271, 372, 424, 727, 742
SspMI CTAG 4 cut(s) 290, 800, 863, 1001
StyD4I CCNGG 9 cut(s) 92, 116, 239, 240, 261, 318, 348, 1193, 1322
StyI CCWWGG 2 cut(s) 132, 1287
TaaI ACNGT 4 cut(s) 80, 286, 1227, 1362
TaiI ACGT 3 cut(s) 415, 724, 766
TaqI TCGA 5 cut(s) 258, 281, 409, 1221, 1230
TasI AATT 5 cut(s) 508, 560, 712, 921, 1032
TatI WGTACW 1 cut(s) 704
TauI GCSGC 3 cut(s) 92, 223, 744
TfiI GAWTC 1 cut(s) 1123
Tru1I TTAA 2 cut(s) 1098, 1242
Tru9I TTAA 2 cut(s) 1098, 1242
TscAI CASTG 4 cut(s) 105, 349, 606, 1365
TseFI GTSAC 1 cut(s) 385
TseI GCWGC 6 cut(s) 160, 620, 932, 982, 1129, 1132
Tsp45I GTSAC 1 cut(s) 385
TspMI CCCGGG 1 cut(s) 240
TspRI CASTG 4 cut(s) 105, 349, 606, 1365
Van91I CCANNNNNTGG 1 cut(s) 1323
VpaK11BI GGWCC 3 cut(s) 129, 244, 421
XapI RAATTY 3 cut(s) 508, 712, 921
XmaI CCCGGG 1 cut(s) 240
XmiI GTMKAC 2 cut(s) 281, 1077
XspI CTAG 4 cut(s) 290, 800, 863, 1001
ZrmI AGTACT 1 cut(s) 706
Zsp2I ATGCAT 1 cut(s) 1180
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.