Rroxscaffold_1G00035090

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000157
Physical Location & Seq
Forward (+)
51055140 .. 51058023
2884 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00035090.1

Sequence Viewer

Length: 1914 bp
ATGTGCTCTTTTCATTTTTCAGTTCCACACACTCTTGGATGCATGTGGAGGTTCAATTTGGAACCATTGTCTGGCCCACAAGCACACAATTCTGTACCGCCTGGAATTCAATTGATGGCTACTGGTAATGGAGATCCAATGGCAAGTGCACATACTGCCATCAACATTCTCTCGATACATTCGCATCGTTTTCTAGAAAACAACAATAGAGAGCTATACCTTAATACATGTGTGCCACTCTCTAAGTATGCACTAAAAGGCAATTGGGAAGCTGCTGAACGAATCTTGAAGGAGGATCCGAGTCTTTTGACTTCTAGCATAACAAGAGGGCAGGACACTGTCCTTCACATTGCAGCAGGAGCAAGACATGTTCGCTTTGTGGAGAAGCTGGTCGAAATGATGGAAGAACTGAATGGAAACGAGACATGTTCACAAAACTTGGCACTGAAAGACACGAATGGAAACACTGCCTTCAGCATTGCTGCTGCAGCTGGAAGTATTGAAATTGCAGAGATTTTGATCAAGAAGAATAAGGATTTGCCAATAATTCGAGGTGGTAAAGGAATGACACCACTCTATATGGCTGCCTTGTTGGGACAGTCTGTAATGGCAGATAACCTGTACTCTGGAACCAAGGAAATGTTGGAGGAATTCGACCGCCAAGCGTTGTTTTTTACTTGTATCGATAATGGTCTGTACGATCTAGCTTTGAAGATTCTAAGAAGTGACAGAGCATTAGCTAAGGCTTGTAATGCAAAAGAGGAAACAGCTTTGCATATCTTGGCTAGAACGCCTTCAGACTTCACCAGCCAAAGTCCAGGAACGTGGAGTAGACTCATCAACTCATTTATCCCAGATTGGAATTTCTCATACAATAGAAACTTGAAACAAGTCAATGAAGCCCTTCAACTAGTCCAATGCCTTTGGACAGAAATCTTGAGAAATGATCATGACTATGTGATGAGACTAATCAAACATCCTTCAAGATTACTGTTCGACGCTACAAAATTAGGAAATTATGAGTTCCTGGCAGTGCTCATTAACTCTTATCCTGACTTAATATGGGAACTTGATGACAAAAGTCGGAGTATAATCCATGTTGCTGTTTTGCATCGTCATGCAAGTATCTTCAATTTAGTGCATGAGATAGGTTCCATCAAGGATATCATAGTGACATTTACTGATGATGAAGAGAGTAACAACATTTTACATATGGCTGCAAAATTAGCACCTCCAAATCAACTCAACCTTGTATCAGGAGCAGCTCTTCAAATGCAGCGAGAGTTGGTATGGTTTGAGGAAGTGAAAAAGATTGTACAACCTAACTCCATAGAGATGAAAAACAAGAAAGGAAAAACACCAAGAGAATTGTTCACAAGTGAGCATGAAGGGTTGTTACACAAAGGAGAAGCATGGATGAAGGACACTGCAAGTTCATGCATGATTGTTGCGGCTCTTATCGCAGCTGTTGTGTTTTCAGCTGCATTTAGCGTACCTGGTGGTACATCTGATAATACAGGACAGCCAAACTTTCTAAAAGAGACTGCTTTCCTATTCTTTGCCATAGCAGATGGAGTAGCACTCGTTTCCTCTTCAACTTCAATACTGATGTTCTTGTTCATCCTCACATCGCGTTACGCTGAAAGTGATTTCCTCAAATCATTACCGTTGAAGTTGATGATAGGACTCGCATCACTTTTCATATCTATAGCATCCATGATGGTAGCTTTTAGCGCAACCTTCTATTTAGACTGTCACTATGGATTAGGATGGGTCCCAAATCTTATATTTGTATTTGCATTTGTCCCAGTTGCTTTGTTTGCTTTTCTGCAGTTTCCTCTCTTGTCTGATATGTTTTCTTCAACATATTGTTCAAGTCTTTTATTTCAGCCATGGAAACATATGATCGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

637

Amino Acids

71.02

Weight (kDa)

6.07

Isoelectric Point (pI)

38.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 84 - 179 1.5e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 146 - 208 1.1e-06 Ankyrin repeats (3 copies)
PGG PF13962 471 - 583 4.5e-25 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 71
AccI GTMKAC 1 cut(s) 832
AccII CGCG 1 cut(s) 1633
AciI CCGC 3 cut(s) 98, 658, 1451
AclWI GGATC 3 cut(s) 128, 290, 303
AcsI RAATTY 3 cut(s) 105, 650, 862
AcuI CTGAAG 2 cut(s) 457, 780
AfaI GTAC 6 cut(s) 96, 623, 698, 1317, 1494, 1504
AfiI CCNNNNNNNGG 1 cut(s) 71
AflIII ACRYGT 3 cut(s) 227, 367, 425
AhlI ACTAGT 1 cut(s) 910
AjnI CCWGG 4 cut(s) 100, 817, 1026, 1495
Alw21I GWGCWC 3 cut(s) 8, 151, 1038
Alw26I GTCTC 3 cut(s) 416, 958, 1535
Alw44I GTGCAC 1 cut(s) 147
AlwI GGATC 3 cut(s) 128, 290, 303
AoxI GGCC 1 cut(s) 73
ApaLI GTGCAC 1 cut(s) 147
ApoI RAATTY 3 cut(s) 105, 650, 862
Asp700I GAANNNNTTC 2 cut(s) 793, 903
AspLEI GCGC 1 cut(s) 1736
AspS9I GGNCC 2 cut(s) 74, 1774
AsuHPI GGTGA 1 cut(s) 796
AvaII GGWCC 1 cut(s) 1774
BaeGI GKGCMC 1 cut(s) 151
BamHI GGATCC 1 cut(s) 295
BarI GAAGNNNNNNTAC 2 cut(s) 1380, 1412
Bbv12I GWGCWC 3 cut(s) 8, 151, 1038
BccI CCATC 7 cut(s) 109, 167, 394, 1163, 1565, 1714, 1764
BciT130I CCWGG 4 cut(s) 102, 819, 1028, 1497
BclI TGATCA 2 cut(s) 519, 946
BcoDI GTCTC 3 cut(s) 416, 958, 1535
BcuI ACTAGT 1 cut(s) 910
BfaI CTAG 5 cut(s) 194, 315, 704, 786, 911
BfmI CTRYAG 3 cut(s) 486, 1707, 1829
Bme1390I CCNGG 4 cut(s) 102, 819, 1028, 1497
Bme18I GGWCC 1 cut(s) 1774
BmgT120I GGNCC 2 cut(s) 74, 1774
BmiI GGNNCC 6 cut(s) 63, 297, 631, 1153, 1775, 1776
BmrFI CCNGG 4 cut(s) 102, 819, 1028, 1497
BmrI ACTGGG 1 cut(s) 1802
BmsI GCATC 5 cut(s) 29, 193, 1120, 1700, 1721
BmuI ACTGGG 1 cut(s) 1802
BoxI GACNNNNGTC 1 cut(s) 1080
BplI GAGNNNNNCTC 2 cut(s) 1566, 1598
Bpu10I CCTNAGC 1 cut(s) 741
BpuEI CTTGAG 1 cut(s) 958
Bsa29I ATCGAT 1 cut(s) 684
BsaBI GATNNNNATC 1 cut(s) 518
BsaJI CCNNGG 2 cut(s) 633, 1892
Bsc4I CCNNNNNNNGG 1 cut(s) 71
Bse1I ACTGG 2 cut(s) 127, 1808
Bse3DI GCAATG 2 cut(s) 348, 477
Bse8I GATNNNNATC 1 cut(s) 518
BseBI CCWGG 4 cut(s) 102, 819, 1028, 1497
BseCI ATCGAT 1 cut(s) 684
BseDI CCNNGG 2 cut(s) 633, 1892
BseGI GGATG 6 cut(s) 44, 976, 1422, 1620, 1712, 1775
BseJI GATNNNNATC 1 cut(s) 518
BseLI CCNNNNNNNGG 1 cut(s) 71
BseMI GCAATG 2 cut(s) 348, 477
BseNI ACTGG 2 cut(s) 127, 1808
BseSI GKGCMC 1 cut(s) 151
Bsh1236I CGCG 1 cut(s) 1633
Bsh1285I CGRYCG 1 cut(s) 658
BshFI GGCC 1 cut(s) 75
BshVI ATCGAT 1 cut(s) 684
BsiEI CGRYCG 1 cut(s) 658
BsiHKAI GWGCWC 3 cut(s) 8, 151, 1038
BslFI GGGAC 3 cut(s) 609, 1760, 1790
BslI CCNNNNNNNGG 1 cut(s) 71
BsmAI GTCTC 3 cut(s) 416, 958, 1535
BsmFI GGGAC 3 cut(s) 609, 1760, 1790
BsnI GGCC 1 cut(s) 75
Bsp1286I GDGCHC 3 cut(s) 8, 151, 1038
Bsp1407I TGTACA 1 cut(s) 1315
Bsp143I GATC 6 cut(s) 133, 295, 519, 700, 946, 1905
Bsp19I CCATGG 1 cut(s) 1892
BspACI CCGC 3 cut(s) 98, 658, 1451
BspANI GGCC 1 cut(s) 75
BspDI ATCGAT 1 cut(s) 684
BspFNI CGCG 1 cut(s) 1633
BspHI TCATGA 1 cut(s) 949
BspLI GGNNCC 6 cut(s) 63, 297, 631, 1153, 1775, 1776
BspMAI CTGCAG 2 cut(s) 490, 1833
BspPI GGATC 3 cut(s) 128, 290, 303
BspQI GCTCTTC 1 cut(s) 1272
BsrDI GCAATG 2 cut(s) 348, 477
BsrGI TGTACA 1 cut(s) 1315
BsrI ACTGG 2 cut(s) 127, 1808
BssECI CCNNGG 2 cut(s) 633, 1892
BssMI GATC 6 cut(s) 133, 295, 519, 700, 946, 1905
BssT1I CCWWGG 2 cut(s) 633, 1892
Bst2UI CCWGG 4 cut(s) 102, 819, 1028, 1497
Bst4CI ACNGT 5 cut(s) 340, 600, 993, 1668, 1754
Bst6I CTCTTC 3 cut(s) 1185, 1272, 1597
BstAPI GCANNNNNTGC 1 cut(s) 155
BstAUI TGTACA 1 cut(s) 1315
BstDEI CTNAG 3 cut(s) 243, 719, 741
BstDSI CCRYGG 1 cut(s) 1892
BstF5I GGATG 6 cut(s) 44, 976, 1422, 1620, 1712, 1775
BstFNI CGCG 1 cut(s) 1633
BstHHI GCGC 1 cut(s) 1736
BstKTI GATC 6 cut(s) 136, 298, 522, 703, 949, 1908
BstMAI GTCTC 3 cut(s) 416, 958, 1535
BstMBI GATC 6 cut(s) 133, 295, 519, 700, 946, 1905
BstMCI CGRYCG 1 cut(s) 658
BstMWI GCNNNNNNNGC 8 cut(s) 155, 359, 488, 752, 1226, 1460, 1733, 1820
BstNI CCWGG 4 cut(s) 102, 819, 1028, 1497
BstNSI RCATGY 4 cut(s) 46, 231, 371, 429
BstPAI GACNNNNGTC 1 cut(s) 1080
BstSCI CCNGG 4 cut(s) 100, 817, 1026, 1495
BstSFI CTRYAG 3 cut(s) 486, 1707, 1829
BstSLI GKGCMC 1 cut(s) 151
BstUI CGCG 1 cut(s) 1633
BstX2I RGATCY 2 cut(s) 133, 295
BstXI CCANNNNNNTGG 1 cut(s) 825
BstYI RGATCY 2 cut(s) 133, 295
Bsu15I ATCGAT 1 cut(s) 684
BsuRI GGCC 1 cut(s) 75
BsuTUI ATCGAT 1 cut(s) 684
BtgI CCRYGG 1 cut(s) 1892
BtgZI GCGATG 1 cut(s) 1614
BtsCI GGATG 6 cut(s) 44, 976, 1422, 1620, 1712, 1775
BtsI GCAGTG 3 cut(s) 465, 1038, 1425
BtsIMutI CAGTG 5 cut(s) 336, 443, 465, 1038, 1425
CciI TCATGA 1 cut(s) 949
CfoI GCGC 1 cut(s) 1736
Cfr13I GGNCC 2 cut(s) 74, 1774
ClaI ATCGAT 1 cut(s) 684
CseI GACGC 1 cut(s) 1007
CsiI ACCWGGT 1 cut(s) 1495
Csp6I GTAC 6 cut(s) 95, 622, 697, 1316, 1493, 1503
CviQI GTAC 6 cut(s) 95, 622, 697, 1316, 1493, 1503
DdeI CTNAG 3 cut(s) 243, 719, 741
DpnI GATC 6 cut(s) 135, 297, 521, 702, 948, 1907
DpnII GATC 6 cut(s) 133, 295, 519, 700, 946, 1905
Eam1104I CTCTTC 3 cut(s) 1185, 1272, 1597
EarI CTCTTC 3 cut(s) 1185, 1272, 1597
Eco130I CCWWGG 2 cut(s) 633, 1892
Eco32I GATATC 1 cut(s) 1165
Eco47I GGWCC 1 cut(s) 1774
Eco57I CTGAAG 2 cut(s) 457, 780
EcoO109I RGGNCCY 1 cut(s) 1774
EcoRI GAATTC 2 cut(s) 105, 650
EcoRII CCWGG 4 cut(s) 100, 817, 1026, 1495
EcoRV GATATC 1 cut(s) 1165
EcoT14I CCWWGG 2 cut(s) 633, 1892
EcoT22I ATGCAT 2 cut(s) 44, 1442
ErhI CCWWGG 2 cut(s) 633, 1892
FaqI GGGAC 3 cut(s) 609, 1760, 1790
FauNDI CATATG 2 cut(s) 1212, 1902
FbaI TGATCA 2 cut(s) 519, 946
FblI GTMKAC 1 cut(s) 832
FokI GGATG 6 cut(s) 51, 963, 1429, 1607, 1699, 1782
FspBI CTAG 5 cut(s) 194, 315, 704, 786, 911
GlaI GCGC 1 cut(s) 1735
HaeIII GGCC 1 cut(s) 75
HgaI GACGC 1 cut(s) 1007
HhaI GCGC 1 cut(s) 1736
Hin6I GCGC 1 cut(s) 1734
HinP1I GCGC 1 cut(s) 1734
HinfI GANTC 5 cut(s) 282, 301, 715, 834, 1686
HphI GGTGA 1 cut(s) 796
Hpy166II GTNNAC 4 cut(s) 149, 431, 833, 1374
Hpy188I TCNGA 5 cut(s) 300, 799, 1086, 1510, 1849
Hpy8I GTNNAC 4 cut(s) 149, 431, 833, 1374
Hpy99I CGWCG 1 cut(s) 1001
HpyAV CCTTC 9 cut(s) 283, 353, 481, 804, 914, 990, 1382, 1414, 1750
HpyCH4III ACNGT 5 cut(s) 340, 600, 993, 1668, 1754
HpyCH4IV ACGT 1 cut(s) 824
HpyF10VI GCNNNNNNNGC 8 cut(s) 155, 359, 488, 752, 1226, 1460, 1733, 1820
HpyF3I CTNAG 3 cut(s) 243, 719, 741
HpySE526I ACGT 1 cut(s) 824
HspAI GCGC 1 cut(s) 1734
KflI GGGWCCC 1 cut(s) 1774
Ksp22I TGATCA 2 cut(s) 519, 946
Kzo9I GATC 6 cut(s) 133, 295, 519, 700, 946, 1905
LguI GCTCTTC 1 cut(s) 1272
LmnI GCTCC 2 cut(s) 359, 1259
LweI GCATC 5 cut(s) 29, 193, 1120, 1700, 1721
MabI ACCWGGT 1 cut(s) 1495
MaeI CTAG 5 cut(s) 194, 315, 704, 786, 911
MaeII ACGT 1 cut(s) 824
MaeIII GTNAC 6 cut(s) 725, 1171, 1196, 1395, 1634, 1754
MalI GATC 6 cut(s) 135, 297, 521, 702, 948, 1907
MboI GATC 6 cut(s) 133, 295, 519, 700, 946, 1905
MboII GAAGA 8 cut(s) 416, 538, 724, 1120, 1202, 1259, 1584, 1851
MfeI CAATTG 2 cut(s) 110, 262
MflI RGATCY 2 cut(s) 133, 295
MhlI GDGCHC 3 cut(s) 8, 151, 1038
MlyI GAGTC 3 cut(s) 310, 828, 1680
MmeI TCCRAC 2 cut(s) 624, 1064
Mph1103I ATGCAT 2 cut(s) 44, 1442
MroXI GAANNNNTTC 2 cut(s) 793, 903
MseI TTAA 3 cut(s) 222, 1041, 1058
MslI CAYNNNNRTG 3 cut(s) 954, 1116, 1334
MspA1I CMGCKG 3 cut(s) 491, 1466, 1481
MspR9I CCNGG 4 cut(s) 102, 819, 1028, 1497
MunI CAATTG 2 cut(s) 110, 262
MvaI CCWGG 4 cut(s) 102, 819, 1028, 1497
MvnI CGCG 1 cut(s) 1633
MwoI GCNNNNNNNGC 8 cut(s) 155, 359, 488, 752, 1226, 1460, 1733, 1820
NcoI CCATGG 1 cut(s) 1892
NdeI CATATG 2 cut(s) 1212, 1902
NdeII GATC 6 cut(s) 133, 295, 519, 700, 946, 1905
NlaIV GGNNCC 6 cut(s) 63, 297, 631, 1153, 1775, 1776
NmuCI GTSAC 3 cut(s) 725, 1171, 1754
NsiI ATGCAT 2 cut(s) 44, 1442
NspI RCATGY 4 cut(s) 46, 231, 371, 429
PagI TCATGA 1 cut(s) 949
PciI ACATGT 3 cut(s) 227, 367, 425
PciSI GCTCTTC 1 cut(s) 1272
PdmI GAANNNNTTC 2 cut(s) 793, 903
PfeI GAWTC 2 cut(s) 282, 715
PflFI GACNNNGTC 1 cut(s) 338
PflMI CCANNNNNTGG 1 cut(s) 71
PfoI TCCNGGA 1 cut(s) 817
PleI GAGTC 3 cut(s) 309, 828, 1680
PpsI GAGTC 3 cut(s) 309, 828, 1680
PpuMI RGGWCCY 1 cut(s) 1774
PscI ACATGT 3 cut(s) 227, 367, 425
PshAI GACNNNNGTC 1 cut(s) 1080
Psp5II RGGWCCY 1 cut(s) 1774
Psp6I CCWGG 4 cut(s) 100, 817, 1026, 1495
PspGI CCWGG 4 cut(s) 100, 817, 1026, 1495
PspN4I GGNNCC 6 cut(s) 63, 297, 631, 1153, 1775, 1776
PspPI GGNCC 2 cut(s) 74, 1774
PspPPI RGGWCCY 1 cut(s) 1774
PstI CTGCAG 2 cut(s) 490, 1833
PsuI RGATCY 2 cut(s) 133, 295
PsyI GACNNNGTC 1 cut(s) 338
PvuII CAGCTG 3 cut(s) 491, 1466, 1481
RsaI GTAC 6 cut(s) 96, 623, 698, 1317, 1494, 1504
RsaNI GTAC 6 cut(s) 95, 622, 697, 1316, 1493, 1503
RseI CAYNNNNRTG 3 cut(s) 954, 1116, 1334
SapI GCTCTTC 1 cut(s) 1272
SaqAI TTAA 3 cut(s) 222, 1041, 1058
Sau3AI GATC 6 cut(s) 133, 295, 519, 700, 946, 1905
Sau96I GGNCC 2 cut(s) 74, 1774
SchI GAGTC 3 cut(s) 310, 828, 1680
ScrFI CCNGG 4 cut(s) 102, 819, 1028, 1497
SduI GDGCHC 3 cut(s) 8, 151, 1038
SexAI ACCWGGT 1 cut(s) 1495
SfaNI GCATC 5 cut(s) 29, 193, 1120, 1700, 1721
SfcI CTRYAG 3 cut(s) 486, 1707, 1829
SinI GGWCC 1 cut(s) 1774
SmiMI CAYNNNNRTG 3 cut(s) 954, 1116, 1334
SmlI CTYRAG 1 cut(s) 937
SmoI CTYRAG 1 cut(s) 937
SpeI ACTAGT 1 cut(s) 910
SsiI CCGC 3 cut(s) 98, 658, 1451
SspMI CTAG 5 cut(s) 194, 315, 704, 786, 911
StyD4I CCNGG 4 cut(s) 100, 817, 1026, 1495
StyI CCWWGG 2 cut(s) 633, 1892
TaaI ACNGT 5 cut(s) 340, 600, 993, 1668, 1754
TaiI ACGT 1 cut(s) 827
TaqI TCGA 7 cut(s) 173, 393, 550, 654, 684, 996, 1908
TatI WGTACW 2 cut(s) 621, 1315
TauI GCSGC 1 cut(s) 1454
TfiI GAWTC 2 cut(s) 282, 715
Tru1I TTAA 3 cut(s) 222, 1041, 1058
Tru9I TTAA 3 cut(s) 222, 1041, 1058
TscAI CASTG 5 cut(s) 343, 450, 472, 1038, 1432
TseFI GTSAC 3 cut(s) 725, 1171, 1754
Tsp45I GTSAC 3 cut(s) 725, 1171, 1754
TspDTI ATGAA 8 cut(s) 912, 1203, 1352, 1401, 1425, 1433, 1609, 1690
TspRI CASTG 5 cut(s) 343, 450, 472, 1038, 1432
Tth111I GACNNNGTC 1 cut(s) 338
Van91I CCANNNNNTGG 1 cut(s) 71
VneI GTGCAC 1 cut(s) 147
VpaK11BI GGWCC 1 cut(s) 1774
XapI RAATTY 3 cut(s) 105, 650, 862
XbaI TCTAGA 1 cut(s) 193
XceI RCATGY 4 cut(s) 46, 231, 371, 429
XcmI CCANNNNNNNNNTGG 1 cut(s) 640
XmiI GTMKAC 1 cut(s) 832
XmnI GAANNNNTTC 2 cut(s) 793, 903
XspI CTAG 5 cut(s) 194, 315, 704, 786, 911
Zsp2I ATGCAT 2 cut(s) 44, 1442
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.