Rh5DG292100

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000157
Physical Location & Seq
Reverse (-)
36582494 .. 36585481
2988 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG292100.1

Sequence Viewer

Length: 1251 bp
ATGTCTATCCAACAAGAACAACATGTATCACCTTCCCGGATTCAATTAACCACAGCTAGCCGCAATTCAGCGACTGGGACAGACAACCAATCCGCAGACATTGCCATCGACATTTCAGCAGATCATTCGGCTCAACCTAACAGACCTTCTTCTTATTTACTGGAACACAAAAACAGAGAAGAATCCCGTAAGACACGTGTTGCCCTCTATAAGTATGCACTAAAAGGCGATTGGGAAGCCGCTGAACCGATCTTGAAACAGAACAGCAAACTACTGCAAGCAAGCATATCTAGAGGATATGAAACAATCCTTCACGTTGCAGCAGGAACAAGCCATATTCAGTTTGTGGAGAAACTGGTCGGCATGATGAAAGTAGAAGACTTGGCACTGCAGGATGAAAATGGAAACACTGCCTTATGCATTGCCGCTGCGGCTGGATCTCTAGAAATTGTCCAGATTTTGATAGAAAAGAACGAGTCTTTGCTAACAATTAGAGGCGGTAAAGATATGGCACCAGCCTACATGGCTGCTGTGTTAGGACAGTCCGGAATGGCATGGCACCTGTACCACGTAAGTAAAAAGATGCTGGAGGAAACCGACCAAGAAAACTTGTTCTTTTCTTGCATCAACAATTGTTTGTACGATTTGGCCTCTCAGTTGCTAGATGCTAATAAAGCATTAGCGAAGGCACGTACTAGCTCGCAGAAAAATAAAACGGCCTTGCATATCCTGGCTCGAAAACCTTCAGCATTTGGTGGCAGCCAAAGTCCACGAATGTGGACTAGACTCATTAACTCATTCCTCCCAGGTTTCAAGTTCGCATACAAAAGAGAGTTGAGAGAAGCTGATGGAGCCCTTCAACTAGTCCGCTGCCTCTGGGAAGAAGTCTTGAGAGATGATAACCATGATGACGTGATGGAGCTGATCAACTATCCTTCAAATTTATTATTTGACGCAGCAGAATTAGGAAATTATGAGTTTTTGGCAGAGCTTCTGAGCTCTTATCCTGAGTTAGTATGGGAAACTGATGAAAAAAATCGAACCATAATCCATGTCGCAGTTCTGCATCGTCATGCGAGTATCTTCAATCTAGTGCATGAAATAGGCTCAATCAAAGATGTCATCGTGACATATGTAGATAAGGGGGGTAACAACATTGTGCATATGGCTGCAAACTTAGCACCTCAAAATCAATTGAATCTCGTGTCAGGCGTAGCTCTTCAAATGCATCGAGAGTTAGTATGGTTTGAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

417

Amino Acids

46.6

Weight (kDa)

5.94

Isoelectric Point (pI)

49.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 76 - 159 1.4e-09 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 511, 558
AccIII TCCGGA 1 cut(s) 545
AciI CCGC 7 cut(s) 61, 93, 240, 426, 431, 498, 868
AclWI GGATC 1 cut(s) 445
AcsI RAATTY 1 cut(s) 940
AcuI CTGAAG 1 cut(s) 729
AcvI CACGTG 1 cut(s) 197
AfaI GTAC 3 cut(s) 566, 641, 694
AflIII ACRYGT 3 cut(s) 22, 194, 196
AgsI TTSAA 8 cut(s) 44, 256, 814, 860, 939, 1087, 1198, 1223
AhlI ACTAGT 1 cut(s) 862
AjiI CACGTC 1 cut(s) 913
AjnI CCWGG 2 cut(s) 729, 805
AleI CACNNNNGTG 1 cut(s) 775
AluBI AGCT 7 cut(s) 56, 699, 845, 922, 991, 999, 1217
AluI AGCT 7 cut(s) 56, 699, 845, 922, 991, 999, 1217
Alw21I GWGCWC 1 cut(s) 1001
AlwI GGATC 1 cut(s) 445
AlwNI CAGNNNCTG 1 cut(s) 74
Aor13HI TCCGGA 1 cut(s) 545
AoxI GGCC 2 cut(s) 648, 717
ApeKI GCWGC 7 cut(s) 320, 428, 527, 759, 870, 956, 1169
ApoI RAATTY 1 cut(s) 940
Asp700I GAANNNNTTC 1 cut(s) 742
AsuC2I CCSGG 1 cut(s) 37
AsuHPI GGTGA 1 cut(s) 21
AsuNHI GCTAGC 1 cut(s) 56
BanI GGYRCC 2 cut(s) 511, 558
BanII GRGCYC 2 cut(s) 856, 1001
BauI CACGAG 1 cut(s) 1202
BbrPI CACGTG 1 cut(s) 197
BbsI GAAGAC 1 cut(s) 384
Bbv12I GWGCWC 1 cut(s) 1001
BbvI GCAGC 7 cut(s) 332, 415, 514, 771, 857, 968, 1156
BccI CCATC 3 cut(s) 113, 842, 910
BceAI ACGGC 1 cut(s) 732
BcgI CGANNNNNNTGC 2 cut(s) 108, 142
BciT130I CCWGG 2 cut(s) 731, 807
BclI TGATCA 1 cut(s) 924
BcnI CCSGG 1 cut(s) 37
BcuI ACTAGT 1 cut(s) 862
BfaI CTAG 8 cut(s) 57, 291, 443, 662, 696, 783, 863, 1091
BfmI CTRYAG 1 cut(s) 389
BglI GCCNNNNNGGC 2 cut(s) 431, 524
Bme1390I CCNGG 3 cut(s) 37, 731, 807
BmgBI CACGTC 1 cut(s) 913
BmiI GGNNCC 3 cut(s) 513, 560, 853
BmrFI CCNGG 3 cut(s) 37, 731, 807
BmrI ACTGGG 1 cut(s) 84
BmsI GCATC 5 cut(s) 573, 633, 655, 1075, 1237
BmtI GCTAGC 1 cut(s) 60
BmuI ACTGGG 1 cut(s) 84
BpiI GAAGAC 1 cut(s) 384
BpmI CTGGAG 1 cut(s) 608
BpuEI CTTGAG 1 cut(s) 910
BpuMI CCSGG 1 cut(s) 37
BsaAI YACGTR 3 cut(s) 197, 571, 692
BsaJI CCNNGG 1 cut(s) 805
BsaWI WCCGGW 1 cut(s) 545
Bse1I ACTGG 3 cut(s) 79, 165, 360
Bse3DI GCAATG 2 cut(s) 99, 420
BseAI TCCGGA 1 cut(s) 545
BseBI CCWGG 2 cut(s) 731, 807
BseDI CCNNGG 1 cut(s) 805
BseGI GGATG 1 cut(s) 400
BseMI GCAATG 2 cut(s) 99, 420
BseMII CTCAG 3 cut(s) 668, 986, 999
BseNI ACTGG 3 cut(s) 79, 165, 360
BseXI GCAGC 7 cut(s) 332, 415, 514, 771, 857, 968, 1156
BshFI GGCC 2 cut(s) 650, 719
BshNI GGYRCC 2 cut(s) 511, 558
BsiHKAI GWGCWC 1 cut(s) 1001
BsiSI CCGG 2 cut(s) 37, 546
BslFI GGGAC 1 cut(s) 91
BsmFI GGGAC 1 cut(s) 91
BsnI GGCC 2 cut(s) 650, 719
Bsp1286I GDGCHC 2 cut(s) 856, 1001
Bsp13I TCCGGA 1 cut(s) 545
Bsp143I GATC 4 cut(s) 121, 249, 437, 924
BspACI CCGC 7 cut(s) 61, 93, 240, 426, 431, 498, 868
BspANI GGCC 2 cut(s) 650, 719
BspCNI CTCAG 3 cut(s) 667, 987, 1000
BspEI TCCGGA 1 cut(s) 545
BspLI GGNNCC 3 cut(s) 513, 560, 853
BspMAI CTGCAG 1 cut(s) 393
BspOI GCTAGC 1 cut(s) 60
BspPI GGATC 1 cut(s) 445
BspQI GCTCTTC 1 cut(s) 1224
BspT107I GGYRCC 2 cut(s) 511, 558
BsrDI GCAATG 2 cut(s) 99, 420
BsrI ACTGG 3 cut(s) 79, 165, 360
BssECI CCNNGG 1 cut(s) 805
BssMI GATC 4 cut(s) 121, 249, 437, 924
BssSI CACGAG 1 cut(s) 1202
Bst2BI CACGAG 1 cut(s) 1202
Bst2UI CCWGG 2 cut(s) 731, 807
Bst4CI ACNGT 1 cut(s) 543
Bst6I CTCTTC 1 cut(s) 1224
BstAPI GCANNNNNTGC 1 cut(s) 101
BstBAI YACGTR 3 cut(s) 197, 571, 692
BstC8I GCNNGC 4 cut(s) 58, 279, 283, 701
BstDEI CTNAG 4 cut(s) 654, 995, 1008, 1177
BstF5I GGATG 1 cut(s) 400
BstKTI GATC 4 cut(s) 124, 252, 440, 927
BstMBI GATC 4 cut(s) 121, 249, 437, 924
BstMWI GCNNNNNNNGC 6 cut(s) 101, 431, 524, 674, 851, 1178
BstNI CCWGG 2 cut(s) 731, 807
BstNSI RCATGY 1 cut(s) 26
BstSCI CCNGG 3 cut(s) 35, 729, 805
BstSFI CTRYAG 1 cut(s) 389
BstV1I GCAGC 7 cut(s) 332, 415, 514, 771, 857, 968, 1156
BstV2I GAAGAC 1 cut(s) 384
BstX2I RGATCY 1 cut(s) 437
BstXI CCANNNNNNTGG 1 cut(s) 777
BstYI RGATCY 1 cut(s) 437
BsuRI GGCC 2 cut(s) 650, 719
BtrI CACGTC 1 cut(s) 913
BtsCI GGATG 1 cut(s) 400
BtsI GCAGTG 2 cut(s) 386, 408
BtsIMutI CAGTG 2 cut(s) 386, 408
Cac8I GCNNGC 4 cut(s) 58, 279, 283, 701
CaiI CAGNNNCTG 1 cut(s) 74
CseI GACGC 1 cut(s) 962
Csp6I GTAC 3 cut(s) 565, 640, 693
CviAII CATG 8 cut(s) 23, 364, 523, 555, 905, 1052, 1073, 1097
CviQI GTAC 3 cut(s) 565, 640, 693
DdeI CTNAG 4 cut(s) 654, 995, 1008, 1177
DpnI GATC 4 cut(s) 123, 251, 439, 926
DpnII GATC 4 cut(s) 121, 249, 437, 924
Eam1104I CTCTTC 1 cut(s) 1224
EarI CTCTTC 1 cut(s) 1224
Ecl136II GAGCTC 1 cut(s) 999
Eco24I GRGCYC 2 cut(s) 856, 1001
Eco53kI GAGCTC 1 cut(s) 999
Eco57I CTGAAG 1 cut(s) 729
Eco72I CACGTG 1 cut(s) 197
EcoICRI GAGCTC 1 cut(s) 999
EcoRII CCWGG 2 cut(s) 729, 805
EcoT22I ATGCAT 2 cut(s) 422, 1230
EcoT38I GRGCYC 2 cut(s) 856, 1001
FaeI CATG 8 cut(s) 26, 367, 526, 558, 908, 1055, 1076, 1100
FaqI GGGAC 1 cut(s) 91
FatI CATG 8 cut(s) 22, 363, 522, 554, 904, 1051, 1072, 1096
FauNDI CATATG 2 cut(s) 1132, 1164
FbaI TGATCA 1 cut(s) 924
FokI GGATG 1 cut(s) 407
FriOI GRGCYC 2 cut(s) 856, 1001
FspBI CTAG 8 cut(s) 57, 291, 443, 662, 696, 783, 863, 1091
GsuI CTGGAG 1 cut(s) 608
HaeIII GGCC 2 cut(s) 650, 719
HapII CCGG 2 cut(s) 37, 546
HgaI GACGC 1 cut(s) 962
Hin1II CATG 8 cut(s) 26, 367, 526, 558, 908, 1055, 1076, 1100
HinfI GANTC 5 cut(s) 40, 182, 476, 786, 1198
HpaII CCGG 2 cut(s) 37, 546
HphI GGTGA 1 cut(s) 21
Hpy166II GTNNAC 2 cut(s) 770, 780
Hpy188I TCNGA 1 cut(s) 996
Hpy188III TCNNGA 9 cut(s) 253, 291, 443, 454, 546, 889, 1007, 1126, 1232
Hpy8I GTNNAC 2 cut(s) 770, 780
HpyAV CCTTC 7 cut(s) 42, 156, 320, 679, 753, 866, 945
HpyCH4III ACNGT 1 cut(s) 543
HpyCH4IV ACGT 5 cut(s) 196, 315, 570, 691, 912
HpyF10VI GCNNNNNNNGC 6 cut(s) 101, 431, 524, 674, 851, 1178
HpyF3I CTNAG 4 cut(s) 654, 995, 1008, 1177
HpySE526I ACGT 5 cut(s) 196, 315, 570, 691, 912
Hsp92II CATG 8 cut(s) 26, 367, 526, 558, 908, 1055, 1076, 1100
Kpn2I TCCGGA 1 cut(s) 545
Ksp22I TGATCA 1 cut(s) 924
Kzo9I GATC 4 cut(s) 121, 249, 437, 924
LguI GCTCTTC 1 cut(s) 1224
LmnI GCTCC 2 cut(s) 851, 919
Lsp1109I GCAGC 7 cut(s) 332, 415, 514, 771, 857, 968, 1156
LweI GCATC 5 cut(s) 573, 633, 655, 1075, 1237
MaeI CTAG 8 cut(s) 57, 291, 443, 662, 696, 783, 863, 1091
MaeII ACGT 5 cut(s) 196, 315, 570, 691, 912
MaeIII GTNAC 2 cut(s) 1126, 1148
MalI GATC 4 cut(s) 123, 251, 439, 926
MboI GATC 4 cut(s) 121, 249, 437, 924
MboII GAAGA 6 cut(s) 141, 191, 389, 893, 1075, 1211
MfeI CAATTG 2 cut(s) 631, 1193
MflI RGATCY 1 cut(s) 437
MhlI GDGCHC 2 cut(s) 856, 1001
MluCI AATT 9 cut(s) 44, 64, 447, 489, 631, 940, 962, 970, 1193
MlyI GAGTC 2 cut(s) 485, 780
MmeI TCCRAC 1 cut(s) 34
MnlI CCTC 8 cut(s) 215, 287, 488, 583, 661, 812, 884, 1194
Mph1103I ATGCAT 2 cut(s) 422, 1230
MroI TCCGGA 1 cut(s) 545
MroXI GAANNNNTTC 1 cut(s) 742
MseI TTAA 2 cut(s) 47, 792
MslI CAYNNNNRTG 2 cut(s) 775, 1071
MspA1I CMGCKG 3 cut(s) 242, 428, 870
MspI CCGG 2 cut(s) 37, 546
MspR9I CCNGG 3 cut(s) 37, 731, 807
MunI CAATTG 2 cut(s) 631, 1193
MvaI CCWGG 2 cut(s) 731, 807
MwoI GCNNNNNNNGC 6 cut(s) 101, 431, 524, 674, 851, 1178
NciI CCSGG 1 cut(s) 37
NdeI CATATG 2 cut(s) 1132, 1164
NdeII GATC 4 cut(s) 121, 249, 437, 924
NheI GCTAGC 1 cut(s) 56
NlaIII CATG 8 cut(s) 26, 367, 526, 558, 908, 1055, 1076, 1100
NlaIV GGNNCC 3 cut(s) 513, 560, 853
NmuCI GTSAC 1 cut(s) 1126
NsiI ATGCAT 2 cut(s) 422, 1230
NspI RCATGY 1 cut(s) 26
OliI CACNNNNGTG 1 cut(s) 775
PciI ACATGT 1 cut(s) 22
PciSI GCTCTTC 1 cut(s) 1224
PcsI WCGNNNNNNNCGW 1 cut(s) 1209
PdmI GAANNNNTTC 1 cut(s) 742
PfeI GAWTC 3 cut(s) 40, 182, 1198
PfoI TCCNGGA 1 cut(s) 35
PleI GAGTC 2 cut(s) 484, 780
PmaCI CACGTG 1 cut(s) 197
PmlI CACGTG 1 cut(s) 197
PpsI GAGTC 2 cut(s) 484, 780
Ppu21I YACGTR 3 cut(s) 197, 571, 692
PscI ACATGT 1 cut(s) 22
Psp124BI GAGCTC 1 cut(s) 1001
Psp6I CCWGG 2 cut(s) 729, 805
PspCI CACGTG 1 cut(s) 197
PspGI CCWGG 2 cut(s) 729, 805
PspN4I GGNNCC 3 cut(s) 513, 560, 853
PstI CTGCAG 1 cut(s) 393
PstNI CAGNNNCTG 1 cut(s) 74
PsuI RGATCY 1 cut(s) 437
RsaI GTAC 3 cut(s) 566, 641, 694
RsaNI GTAC 3 cut(s) 565, 640, 693
RseI CAYNNNNRTG 2 cut(s) 775, 1071
SacI GAGCTC 1 cut(s) 1001
SapI GCTCTTC 1 cut(s) 1224
SaqAI TTAA 2 cut(s) 47, 792
Sau3AI GATC 4 cut(s) 121, 249, 437, 924
SchI GAGTC 2 cut(s) 485, 780
ScrFI CCNGG 3 cut(s) 37, 731, 807
SduI GDGCHC 2 cut(s) 856, 1001
SfaNI GCATC 5 cut(s) 573, 633, 655, 1075, 1237
SfcI CTRYAG 1 cut(s) 389
SmiMI CAYNNNNRTG 2 cut(s) 775, 1071
SmlI CTYRAG 1 cut(s) 889
SmoI CTYRAG 1 cut(s) 889
SpeI ACTAGT 1 cut(s) 862
Sse9I AATT 9 cut(s) 44, 64, 447, 489, 631, 940, 962, 970, 1193
SsiI CCGC 7 cut(s) 61, 93, 240, 426, 431, 498, 868
SspMI CTAG 8 cut(s) 57, 291, 443, 662, 696, 783, 863, 1091
SstI GAGCTC 1 cut(s) 1001
StyD4I CCNGG 3 cut(s) 35, 729, 805
TaaI ACNGT 1 cut(s) 543
TaiI ACGT 5 cut(s) 199, 318, 573, 694, 915
TaqI TCGA 4 cut(s) 108, 736, 1039, 1231
TasI AATT 9 cut(s) 44, 64, 447, 489, 631, 940, 962, 970, 1193
TauI GCSGC 4 cut(s) 63, 242, 428, 434
TfiI GAWTC 3 cut(s) 40, 182, 1198
Tru1I TTAA 2 cut(s) 47, 792
Tru9I TTAA 2 cut(s) 47, 792
TscAI CASTG 2 cut(s) 393, 415
TseFI GTSAC 1 cut(s) 1126
TseI GCWGC 7 cut(s) 320, 428, 527, 759, 870, 956, 1169
Tsp45I GTSAC 1 cut(s) 1126
TspDTI ATGAA 5 cut(s) 315, 383, 411, 1044, 1113
TspRI CASTG 2 cut(s) 393, 415
XapI RAATTY 1 cut(s) 940
XbaI TCTAGA 2 cut(s) 290, 442
XceI RCATGY 1 cut(s) 26
XmnI GAANNNNTTC 1 cut(s) 742
XspI CTAG 8 cut(s) 57, 291, 443, 662, 696, 783, 863, 1091
Zsp2I ATGCAT 2 cut(s) 422, 1230
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.