Rroxscaffold_1G00039190

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000157
Physical Location & Seq
Forward (+)
56755883 .. 56759240
3358 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00039190.1

Sequence Viewer

Length: 1398 bp
ATGTCTACCCCACATGCACAACATGTACCACCTTCCCAGAATCAATTAACCACAGCTAGCCTCGATTCAGCGACTGGGAAAGACAACCAATCCGCACACACCGCCATCGACATTTCAGCTGATCATTCGGCTCAACCTAACAAACCTTCGTCTTATTTACTAGAACGTGCAAACAGAGAAGAATACCTTAAGACATGTGTTGCCCTCTATAAGTATGCACTAAAAGGGGATTGGGAAGCGGCGGAACGAATCTTGAGAAAGGATACTATACTTCTGAGAGCAAGCATATCTAGAGGATATGAAACAGTCCTTCACGTTGCAGCAGGAACAAGCCATATTCACTTTGTGGAGAAACTGGTCAGCATGATGGAAGTAGAAGACTTGGCACTGCAGGACATAAATGGAAACACTGCCTTGTGCATTGCTGCTTCGGCTGGATCTCTAGACATTGTCCAGATTTTGATAAAAAAGAACATGTCTTTGCTAACAATTAGAGGTGGTAAACATATGGCACCGGTCTATATGGCTGCTGTGTTAGGACAGTCTGAAGTGGCATGTTACCTGTACCGCGAAAGTAGTAAAGAGATGTTGAAGAAAACCGACCAAGAAAACTTGTTTTTTTCTTGCATCAACAATTGTCTGTACGATTTGGCCTTTCAGTTGCTAGATGCTGATAAAACATTAGCGAAGGCACGTACTAGTTCGCAAGAAAATAAAACGGCCTTACATATCCTGGCTCGAAGATCTTCAGCATTTGGTGGCAGCCAAAGTCCACCAATGTGGACTAGACTCATTAACTCATTCCTCCCAAGTTTGAAGTTCGCATGCGAAAGAAAGTTGAGAGAAGCTAATGGAGCCCTTCAACTAGTCCGCCTCCTCTGGGAAGAAATCTTGAAAGATGAGCATGATGACGTGATGAGGCTGATCAAATATCCTTCAAATTTATTATTTGACGCAGCGGAATTAGGGAATTATGAGTTCCTGGCAATGCTTATGAACTCTTATCCTGAGTTAGTATGGGAAACTGATGAAAAAAATCGAACCATAATCCATGTCGCAGTTCTGCATCGTCACGCAAGTATCTTCAATCTAGTGCATGAAATAGGATCAATCAAAGATGTCATCGTGACATATGAAGATGATCAGGGTAACAACATTGTGCATATGGCTGCAAAATTAGCACCTCAAAATCAATTGAATCTCGTGTCAGGCGTAGCTCTTCAAATGCATCGAGAGTTGGTATGGTTTGAGGTACTTCTCATGCTTGATGTTTTAATAATGATCATCCAGGTAAAATCGAGGAAGTCAAAAAAATCGTCCAACGTCAATACATCGAGATGGAAAACAACAAAGGAAAAACACCTCAAGAATTATTTACTAAAGAGCATACGGCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

465

Amino Acids

52.47

Weight (kDa)

8.54

Isoelectric Point (pI)

44.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 76 - 159 2.9e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 104 - 191 2.8e-10 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 511
AccI GTMKAC 1 cut(s) 5
AccII CGCG 1 cut(s) 570
AciI CCGC 7 cut(s) 93, 102, 239, 242, 568, 871, 959
AclWI GGATC 2 cut(s) 445, 1114
AcsI RAATTY 1 cut(s) 940
AcuI CTGAAG 2 cut(s) 567, 732
AdeI CACNNNGTG 1 cut(s) 346
AfaI GTAC 5 cut(s) 27, 566, 644, 697, 1254
AfiI CCNNNNNNNGG 1 cut(s) 880
AflII CTTAAG 1 cut(s) 188
AflIII ACRYGT 3 cut(s) 22, 194, 474
AgeI ACCGGT 1 cut(s) 514
AgsI TTSAA 8 cut(s) 592, 817, 863, 895, 939, 1087, 1198, 1223
AhlI ACTAGT 2 cut(s) 698, 865
AjiI CACGTC 1 cut(s) 913
AjnI CCWGG 3 cut(s) 732, 981, 1287
AleI CACNNNNGTG 1 cut(s) 778
AluBI AGCT 4 cut(s) 56, 119, 848, 1217
AluI AGCT 4 cut(s) 56, 119, 848, 1217
AlwI GGATC 2 cut(s) 445, 1114
AlwNI CAGNNNCTG 1 cut(s) 74
AoxI GGCC 2 cut(s) 651, 720
ApeKI GCWGC 6 cut(s) 320, 425, 527, 762, 956, 1169
ApoI RAATTY 1 cut(s) 940
ArsI GACNNNNNNTTYG 2 cut(s) 1301, 1333
AsiGI ACCGGT 1 cut(s) 514
Asp700I GAANNNNTTC 1 cut(s) 745
AsuNHI GCTAGC 1 cut(s) 56
BaeI ACNNNNGTAYC 2 cut(s) 1063, 1096
BanI GGYRCC 1 cut(s) 511
BanII GRGCYC 1 cut(s) 859
BauI CACGAG 1 cut(s) 1202
BbsI GAAGAC 1 cut(s) 384
BbvI GCAGC 6 cut(s) 332, 412, 514, 774, 968, 1156
BccI CCATC 3 cut(s) 113, 361, 1332
BceAI ACGGC 1 cut(s) 735
BciT130I CCWGG 3 cut(s) 734, 983, 1289
BciVI GTATCC 1 cut(s) 256
BclI TGATCA 4 cut(s) 121, 924, 1141, 1281
BcuI ACTAGT 2 cut(s) 698, 865
BfaI CTAG 9 cut(s) 57, 161, 291, 443, 665, 699, 786, 866, 1091
BfmI CTRYAG 1 cut(s) 389
BfrI CTTAAG 1 cut(s) 188
BfuI GTATCC 1 cut(s) 256
BglII AGATCT 1 cut(s) 743
BisI GCNGC 7 cut(s) 240, 321, 426, 528, 763, 957, 1170
BlsI GCNGC 7 cut(s) 241, 322, 427, 529, 764, 958, 1171
Bme1390I CCNGG 3 cut(s) 734, 983, 1289
BmgBI CACGTC 1 cut(s) 913
BmiI GGNNCC 2 cut(s) 513, 856
BmrFI CCNGG 3 cut(s) 734, 983, 1289
BmrI ACTGGG 1 cut(s) 84
BmsI GCATC 4 cut(s) 636, 658, 1075, 1237
BmtI GCTAGC 1 cut(s) 60
BmuI ACTGGG 1 cut(s) 84
BpiI GAAGAC 1 cut(s) 384
BpuEI CTTGAG 2 cut(s) 274, 1349
BsaAI YACGTR 1 cut(s) 695
BsaWI WCCGGW 1 cut(s) 514
Bsc4I CCNNNNNNNGG 1 cut(s) 880
Bse118I RCCGGY 1 cut(s) 514
Bse1I ACTGG 2 cut(s) 79, 360
Bse3DI GCAATG 2 cut(s) 420, 993
BseBI CCWGG 3 cut(s) 734, 983, 1289
BseGI GGATG 1 cut(s) 1284
BseLI CCNNNNNNNGG 1 cut(s) 880
BseMI GCAATG 2 cut(s) 420, 993
BseMII CTCAG 2 cut(s) 266, 999
BseNI ACTGG 2 cut(s) 79, 360
BseRI GAGGAG 1 cut(s) 866
BseXI GCAGC 6 cut(s) 332, 412, 514, 774, 968, 1156
Bsh1236I CGCG 1 cut(s) 570
BshFI GGCC 2 cut(s) 653, 722
BshNI GGYRCC 1 cut(s) 511
BshTI ACCGGT 1 cut(s) 514
BsiSI CCGG 1 cut(s) 515
BslI CCNNNNNNNGG 1 cut(s) 880
BsnI GGCC 2 cut(s) 653, 722
Bsp1286I GDGCHC 1 cut(s) 859
Bsp143I GATC 7 cut(s) 121, 437, 743, 924, 1106, 1141, 1281
BspACI CCGC 7 cut(s) 93, 102, 239, 242, 568, 871, 959
BspANI GGCC 2 cut(s) 653, 722
BspCNI CTCAG 2 cut(s) 267, 1000
BspFNI CGCG 1 cut(s) 570
BspLI GGNNCC 2 cut(s) 513, 856
BspMAI CTGCAG 1 cut(s) 393
BspOI GCTAGC 1 cut(s) 60
BspPI GGATC 2 cut(s) 445, 1114
BspQI GCTCTTC 1 cut(s) 1224
BspT107I GGYRCC 1 cut(s) 511
BspTI CTTAAG 1 cut(s) 188
BsrDI GCAATG 2 cut(s) 420, 993
BsrFI RCCGGY 1 cut(s) 514
BsrI ACTGG 2 cut(s) 79, 360
BssAI RCCGGY 1 cut(s) 514
BssMI GATC 7 cut(s) 121, 437, 743, 924, 1106, 1141, 1281
BssSI CACGAG 1 cut(s) 1202
Bst2BI CACGAG 1 cut(s) 1202
Bst2UI CCWGG 3 cut(s) 734, 983, 1289
Bst4CI ACNGT 2 cut(s) 307, 543
Bst6I CTCTTC 1 cut(s) 1224
BstAFI CTTAAG 1 cut(s) 188
BstBAI YACGTR 1 cut(s) 695
BstC8I GCNNGC 3 cut(s) 58, 283, 826
BstDEI CTNAG 2 cut(s) 275, 1008
BstF5I GGATG 1 cut(s) 1284
BstFNI CGCG 1 cut(s) 570
BstKTI GATC 7 cut(s) 124, 440, 746, 927, 1109, 1144, 1284
BstMBI GATC 7 cut(s) 121, 437, 743, 924, 1106, 1141, 1281
BstMWI GCNNNNNNNGC 4 cut(s) 101, 431, 854, 1178
BstNI CCWGG 3 cut(s) 734, 983, 1289
BstNSI RCATGY 6 cut(s) 17, 26, 198, 478, 558, 828
BstSCI CCNGG 3 cut(s) 732, 981, 1287
BstSFI CTRYAG 1 cut(s) 389
BstUI CGCG 1 cut(s) 570
BstV1I GCAGC 6 cut(s) 332, 412, 514, 774, 968, 1156
BstV2I GAAGAC 1 cut(s) 384
BstX2I RGATCY 2 cut(s) 437, 743
BstXI CCANNNNNNTGG 1 cut(s) 780
BstYI RGATCY 2 cut(s) 437, 743
BsuI GTATCC 1 cut(s) 256
BsuRI GGCC 2 cut(s) 653, 722
BtrI CACGTC 1 cut(s) 913
BtsCI GGATG 1 cut(s) 1284
BtsI GCAGTG 2 cut(s) 386, 408
BtsIMutI CAGTG 2 cut(s) 386, 408
Cac8I GCNNGC 3 cut(s) 58, 283, 826
CaiI CAGNNNCTG 1 cut(s) 74
Cfr10I RCCGGY 1 cut(s) 514
CseI GACGC 1 cut(s) 962
Csp6I GTAC 5 cut(s) 26, 565, 643, 696, 1253
CspAI ACCGGT 1 cut(s) 514
CviQI GTAC 5 cut(s) 26, 565, 643, 696, 1253
DdeI CTNAG 2 cut(s) 275, 1008
DpnI GATC 7 cut(s) 123, 439, 745, 926, 1108, 1143, 1283
DpnII GATC 7 cut(s) 121, 437, 743, 924, 1106, 1141, 1281
DraIII CACNNNGTG 1 cut(s) 346
Eam1104I CTCTTC 1 cut(s) 1224
EarI CTCTTC 1 cut(s) 1224
EciI GGCGGA 2 cut(s) 257, 860
Eco24I GRGCYC 1 cut(s) 859
Eco57I CTGAAG 2 cut(s) 567, 732
EcoRII CCWGG 3 cut(s) 732, 981, 1287
EcoT22I ATGCAT 1 cut(s) 1230
EcoT38I GRGCYC 1 cut(s) 859
FalI AAGNNNNNCTT 2 cut(s) 171, 203
FauNDI CATATG 3 cut(s) 507, 1132, 1164
FbaI TGATCA 4 cut(s) 121, 924, 1141, 1281
FblI GTMKAC 1 cut(s) 5
Fnu4HI GCNGC 7 cut(s) 240, 321, 426, 528, 763, 957, 1170
FokI GGATG 1 cut(s) 1271
FriOI GRGCYC 1 cut(s) 859
Fsp4HI GCNGC 7 cut(s) 240, 321, 426, 528, 763, 957, 1170
FspBI CTAG 9 cut(s) 57, 161, 291, 443, 665, 699, 786, 866, 1091
GluI GCNGC 7 cut(s) 240, 321, 426, 528, 763, 957, 1170
HaeIII GGCC 2 cut(s) 653, 722
HapII CCGG 1 cut(s) 515
HgaI GACGC 1 cut(s) 962
HinfI GANTC 5 cut(s) 40, 65, 249, 789, 1198
HpaII CCGG 1 cut(s) 515
Hpy166II GTNNAC 4 cut(s) 6, 503, 773, 783
Hpy188I TCNGA 2 cut(s) 276, 547
Hpy8I GTNNAC 4 cut(s) 6, 503, 773, 783
HpyAV CCTTC 6 cut(s) 42, 156, 320, 682, 869, 945
HpyCH4III ACNGT 2 cut(s) 307, 543
HpyCH4IV ACGT 5 cut(s) 166, 315, 694, 912, 1323
HpyF10VI GCNNNNNNNGC 4 cut(s) 101, 431, 854, 1178
HpyF3I CTNAG 2 cut(s) 275, 1008
HpySE526I ACGT 5 cut(s) 166, 315, 694, 912, 1323
Ksp22I TGATCA 4 cut(s) 121, 924, 1141, 1281
Kzo9I GATC 7 cut(s) 121, 437, 743, 924, 1106, 1141, 1281
LguI GCTCTTC 1 cut(s) 1224
LmnI GCTCC 1 cut(s) 854
Lsp1109I GCAGC 6 cut(s) 332, 412, 514, 774, 968, 1156
LweI GCATC 4 cut(s) 636, 658, 1075, 1237
MaeI CTAG 9 cut(s) 57, 161, 291, 443, 665, 699, 786, 866, 1091
MaeII ACGT 5 cut(s) 166, 315, 694, 912, 1323
MaeIII GTNAC 4 cut(s) 557, 1070, 1126, 1148
MalI GATC 7 cut(s) 123, 439, 745, 926, 1108, 1143, 1283
MboI GATC 7 cut(s) 121, 437, 743, 924, 1106, 1141, 1281
MboII GAAGA 9 cut(s) 191, 389, 604, 738, 753, 896, 1075, 1148, 1211
MfeI CAATTG 2 cut(s) 634, 1193
MflI RGATCY 2 cut(s) 437, 743
MhlI GDGCHC 1 cut(s) 859
MluCI AATT 9 cut(s) 44, 489, 634, 940, 962, 970, 1175, 1193, 1369
MlyI GAGTC 1 cut(s) 783
MmeI TCCRAC 1 cut(s) 1344
Mph1103I ATGCAT 1 cut(s) 1230
MroXI GAANNNNTTC 1 cut(s) 745
MseI TTAA 5 cut(s) 47, 189, 795, 1274, 1396
MslI CAYNNNNRTG 2 cut(s) 778, 1336
MspA1I CMGCKG 2 cut(s) 119, 959
MspCI CTTAAG 1 cut(s) 188
MspI CCGG 1 cut(s) 515
MspR9I CCNGG 3 cut(s) 734, 983, 1289
MunI CAATTG 2 cut(s) 634, 1193
MvaI CCWGG 3 cut(s) 734, 983, 1289
MvnI CGCG 1 cut(s) 570
MwoI GCNNNNNNNGC 4 cut(s) 101, 431, 854, 1178
NdeI CATATG 3 cut(s) 507, 1132, 1164
NdeII GATC 7 cut(s) 121, 437, 743, 924, 1106, 1141, 1281
NheI GCTAGC 1 cut(s) 56
NlaIV GGNNCC 2 cut(s) 513, 856
NmuCI GTSAC 2 cut(s) 1070, 1126
NsiI ATGCAT 1 cut(s) 1230
NspI RCATGY 6 cut(s) 17, 26, 198, 478, 558, 828
OliI CACNNNNGTG 1 cut(s) 778
PaeI GCATGC 1 cut(s) 828
PciI ACATGT 3 cut(s) 22, 194, 474
PciSI GCTCTTC 1 cut(s) 1224
PcsI WCGNNNNNNNCGW 1 cut(s) 1209
PdmI GAANNNNTTC 1 cut(s) 745
PfeI GAWTC 4 cut(s) 40, 65, 249, 1198
PflFI GACNNNGTC 1 cut(s) 449
PinAI ACCGGT 1 cut(s) 514
PkrI GCNGC 7 cut(s) 241, 322, 427, 529, 764, 958, 1171
PleI GAGTC 1 cut(s) 783
PpsI GAGTC 1 cut(s) 783
Ppu21I YACGTR 1 cut(s) 695
PscI ACATGT 3 cut(s) 22, 194, 474
Psp6I CCWGG 3 cut(s) 732, 981, 1287
PspGI CCWGG 3 cut(s) 732, 981, 1287
PspN4I GGNNCC 2 cut(s) 513, 856
PstI CTGCAG 1 cut(s) 393
PstNI CAGNNNCTG 1 cut(s) 74
PsuI RGATCY 2 cut(s) 437, 743
PsyI GACNNNGTC 1 cut(s) 449
PvuII CAGCTG 1 cut(s) 119
RsaI GTAC 5 cut(s) 27, 566, 644, 697, 1254
RsaNI GTAC 5 cut(s) 26, 565, 643, 696, 1253
RseI CAYNNNNRTG 2 cut(s) 778, 1336
SapI GCTCTTC 1 cut(s) 1224
SaqAI TTAA 5 cut(s) 47, 189, 795, 1274, 1396
SatI GCNGC 7 cut(s) 240, 321, 426, 528, 763, 957, 1170
Sau3AI GATC 7 cut(s) 121, 437, 743, 924, 1106, 1141, 1281
SchI GAGTC 1 cut(s) 783
ScrFI CCNGG 3 cut(s) 734, 983, 1289
SduI GDGCHC 1 cut(s) 859
SfaNI GCATC 4 cut(s) 636, 658, 1075, 1237
SfcI CTRYAG 1 cut(s) 389
SmiMI CAYNNNNRTG 2 cut(s) 778, 1336
SmlI CTYRAG 3 cut(s) 188, 253, 1364
SmoI CTYRAG 3 cut(s) 188, 253, 1364
SpeI ACTAGT 2 cut(s) 698, 865
SphI GCATGC 1 cut(s) 828
Sse9I AATT 9 cut(s) 44, 489, 634, 940, 962, 970, 1175, 1193, 1369
SsiI CCGC 7 cut(s) 93, 102, 239, 242, 568, 871, 959
SspMI CTAG 9 cut(s) 57, 161, 291, 443, 665, 699, 786, 866, 1091
StyD4I CCNGG 3 cut(s) 732, 981, 1287
TaaI ACNGT 2 cut(s) 307, 543
TaiI ACGT 5 cut(s) 169, 318, 697, 915, 1326
TaqI TCGA 7 cut(s) 63, 108, 739, 1039, 1231, 1298, 1334
TasI AATT 9 cut(s) 44, 489, 634, 940, 962, 970, 1175, 1193, 1369
TauI GCSGC 1 cut(s) 242
TfiI GAWTC 4 cut(s) 40, 65, 249, 1198
Tru1I TTAA 5 cut(s) 47, 189, 795, 1274, 1396
Tru9I TTAA 5 cut(s) 47, 189, 795, 1274, 1396
TscAI CASTG 2 cut(s) 393, 415
TseFI GTSAC 2 cut(s) 1070, 1126
TseI GCWGC 6 cut(s) 320, 425, 527, 762, 956, 1169
Tsp45I GTSAC 2 cut(s) 1070, 1126
TspDTI ATGAA 5 cut(s) 315, 1010, 1044, 1113, 1149
TspRI CASTG 2 cut(s) 393, 415
Tth111I GACNNNGTC 1 cut(s) 449
Vha464I CTTAAG 1 cut(s) 188
XapI RAATTY 1 cut(s) 940
XbaI TCTAGA 2 cut(s) 290, 442
XceI RCATGY 6 cut(s) 17, 26, 198, 478, 558, 828
XmiI GTMKAC 1 cut(s) 5
XmnI GAANNNNTTC 1 cut(s) 745
XspI CTAG 9 cut(s) 57, 161, 291, 443, 665, 699, 786, 866, 1091
Zsp2I ATGCAT 1 cut(s) 1230
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.