RchiOBHm_Chr5g0045811

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000157
Physical Location & Seq
Forward (+)
41850191 .. 41852264
2074 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ32386

Sequence Viewer

Length: 1716 bp
ATGTATATATTCAACAAATTAATTACAGAACTTGATCAATTGTCCTTTATAAAATCCTACACAGGAGAGCTATACCTTAATACATGTGTGCCACTCTCTAAGTATGCACTAAAAGGCAATTGGGAAGCTGCTGAACGAATCTTGAAGGAGGATCCGAGTCTTTTGACTTCTAGCATAACAAGAGGGGAGGACACTGTCCTTCACATTGCAGCAGGAGCAAGACATGTTCGCTTTGTGGAGAAGCTGGTCGAAATGATGGAAGAACTGAATGGAAACGAGACATGTTCACAAAACTTGGCACTGAAAGACATCAATGGAAACACTGCCTTCAGCATTGCTGCTGCAGCTGGAAGTATTGAAATTGCAGAGATTTTGATCAAGAAGAATAAGGATTTGCCAATAATTCGAGGTGCTGCAGGAATGACACCACTCTATATGGCTGCCTTGTTGGGACAGTCTGTAATGGCAGATAACCTGTACTCTAGAACCAAGGAAAGGTTGGAGGAATTCGACCGCCAAGCGTTGTTTTTTACTTGTATCGATAATGGTCTGTACGATCTAGCTTTGAAGATTCTAAGAAGTGACAGAGCATTAGCTAAGGCTTATAATGCAAAAGAGGAAACAGCTTTGCATATCTTGGCTAGAACGCCTTCAGACTTCACCAGCCAAAGTCCAGGAACGTGGAGTAGACTCATCAACTCATCCCTTCAACTAGTCCAATGCCTTTGGACAGAAATCTTGAGAAATGATCATGACGATGTGATGAGACTAATCAAACATCCTTCAAGATTACTGTTCGACGCTACAAAATTAGGAAATTATGAGTTCCTGGCAGTGCTCATTAACTCTTATCCTGACTTAATATGGCAACTTGATGACAAAAATCGGAGTATGATCCATGTTGCTGTTTTGCATCGTCATGCAAGTATCTTCAATTTAGTGCATGAGATAGGTTCCATCAAGGATATCATAGTGACATTTACTGATGATGAAGAGAGTAATAACATTTTACATATGGCTGCAAAATTAGCACCTCCAAATCAACTCAACCTTGTATCAGGAGCAGCCCTTCAAATGCAGCGAGAGTTGGTATGGTTTGAGGAAGTGAAAAAGATTGTACAACCTAACTCCATAGAGATGAAAAACAAGAAAGGAAAAACACCACGAGAATTGTTCACAAGTGAGCATGAAGGGTTGTTACACAAAGGAGAAGCATGGATGAAGGACACTGCAAGTTCATGCATGATTGTTGCGGCTCTTATCGCAGCTATTGTGTTTTCAGCTGCATTTAGCGTACCTGGTGGTACATCTGATAATACAGGACAGCCAAACTTTCTAAAAGAGACTGCTTTCCTATTCTTTGCCATAGCAGATGGAGTAGCACTCGTTTCCTCTTCAACTTCAATACTGATGTTCTTGTTCATCCTCACATCGCGTTACGCTGAAGGTGATTTCCTCAAATCGTTACCGTTGAAGTTGATGATAGGACTCGCATCACTTTTCATATCTATAGCATCTATGATGGTAGCTTTTAGCGCAACCTTCTATTTAGACTGTCACTATGGATTAGGATGGGTCCCAAATCTTATATTTGTATTTGCATTTGTCCCGGTTGCTTTGTTTGCTTTTCTGCAGTTTCCTCTCTTGTCTGATATGTGTTCTTCAACATATTGTTCAAGTCTTTTATTTCAGCCATGGAAACATATGATCGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

571

Amino Acids

63.78

Weight (kDa)

5.83

Isoelectric Point (pI)

39.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 36 - 131 2.5e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 99 - 159 1.8e-06 Ankyrin repeats (3 copies)
PGG PF13962 405 - 517 1.4e-24 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 50, 606
AccI GTMKAC 1 cut(s) 688
AccII CGCG 1 cut(s) 1435
AciI CCGC 2 cut(s) 514, 1253
AclWI GGATC 3 cut(s) 146, 159, 889
AcsI RAATTY 1 cut(s) 506
AcuI CTGAAG 3 cut(s) 313, 636, 1464
AfaI GTAC 5 cut(s) 479, 554, 1119, 1296, 1306
AfiI CCNNNNNNNGG 1 cut(s) 495
AflIII ACRYGT 3 cut(s) 83, 223, 281
AhlI ACTAGT 1 cut(s) 712
AjnI CCWGG 3 cut(s) 673, 828, 1297
Alw21I GWGCWC 1 cut(s) 840
Alw26I GTCTC 3 cut(s) 272, 760, 1337
AlwI GGATC 3 cut(s) 146, 159, 889
ApoI RAATTY 1 cut(s) 506
AseI ATTAAT 1 cut(s) 20
Asp700I GAANNNNTTC 1 cut(s) 649
AspLEI GCGC 1 cut(s) 1538
AspS9I GGNCC 1 cut(s) 1576
AsuC2I CCSGG 1 cut(s) 1610
AsuHPI GGTGA 2 cut(s) 652, 1460
AvaII GGWCC 1 cut(s) 1576
BamHI GGATCC 1 cut(s) 151
BarI GAAGNNNNNNTAC 2 cut(s) 1182, 1214
BauI CACGAG 1 cut(s) 1164
Bbv12I GWGCWC 1 cut(s) 840
BccI CCATC 5 cut(s) 250, 965, 1367, 1516, 1566
BciT130I CCWGG 3 cut(s) 675, 830, 1299
BclI TGATCA 3 cut(s) 34, 375, 748
BcnI CCSGG 1 cut(s) 1610
BcoDI GTCTC 3 cut(s) 272, 760, 1337
BcuI ACTAGT 1 cut(s) 712
BfaI CTAG 5 cut(s) 171, 483, 560, 642, 713
BfmI CTRYAG 4 cut(s) 342, 414, 1509, 1631
Bme1390I CCNGG 4 cut(s) 675, 830, 1299, 1610
Bme18I GGWCC 1 cut(s) 1576
BmgT120I GGNCC 1 cut(s) 1576
BmiI GGNNCC 4 cut(s) 153, 955, 1577, 1578
BmrFI CCNGG 4 cut(s) 675, 830, 1299, 1610
BmsI GCATC 3 cut(s) 922, 1502, 1523
BplI GAGNNNNNCTC 2 cut(s) 1368, 1400
Bpu10I CCTNAGC 1 cut(s) 597
BpuEI CTTGAG 1 cut(s) 760
BpuMI CCSGG 1 cut(s) 1610
Bsa29I ATCGAT 1 cut(s) 540
BsaBI GATNNNNATC 1 cut(s) 374
BsaJI CCNNGG 2 cut(s) 489, 1694
Bsc4I CCNNNNNNNGG 1 cut(s) 495
Bse3DI GCAATG 2 cut(s) 204, 333
Bse8I GATNNNNATC 1 cut(s) 374
BseBI CCWGG 3 cut(s) 675, 830, 1299
BseCI ATCGAT 1 cut(s) 540
BseDI CCNNGG 2 cut(s) 489, 1694
BseGI GGATG 5 cut(s) 701, 778, 1224, 1422, 1577
BseJI GATNNNNATC 1 cut(s) 374
BseLI CCNNNNNNNGG 1 cut(s) 495
BseMI GCAATG 2 cut(s) 204, 333
Bsh1236I CGCG 1 cut(s) 1435
Bsh1285I CGRYCG 1 cut(s) 514
BshVI ATCGAT 1 cut(s) 540
BsiEI CGRYCG 1 cut(s) 514
BsiHKAI GWGCWC 1 cut(s) 840
BsiSI CCGG 1 cut(s) 1610
BslFI GGGAC 3 cut(s) 465, 1562, 1592
BslI CCNNNNNNNGG 1 cut(s) 495
BsmAI GTCTC 3 cut(s) 272, 760, 1337
BsmFI GGGAC 3 cut(s) 465, 1562, 1592
Bsp1286I GDGCHC 1 cut(s) 840
Bsp1407I TGTACA 1 cut(s) 1117
Bsp143I GATC 7 cut(s) 34, 151, 375, 556, 748, 894, 1707
Bsp19I CCATGG 1 cut(s) 1694
BspACI CCGC 2 cut(s) 514, 1253
BspDI ATCGAT 1 cut(s) 540
BspFNI CGCG 1 cut(s) 1435
BspHI TCATGA 1 cut(s) 751
BspLI GGNNCC 4 cut(s) 153, 955, 1577, 1578
BspMAI CTGCAG 3 cut(s) 346, 418, 1635
BspPI GGATC 3 cut(s) 146, 159, 889
BsrDI GCAATG 2 cut(s) 204, 333
BsrGI TGTACA 1 cut(s) 1117
BssECI CCNNGG 2 cut(s) 489, 1694
BssMI GATC 7 cut(s) 34, 151, 375, 556, 748, 894, 1707
BssSI CACGAG 1 cut(s) 1164
BssT1I CCWWGG 2 cut(s) 489, 1694
Bst2BI CACGAG 1 cut(s) 1164
Bst2UI CCWGG 3 cut(s) 675, 830, 1299
Bst4CI ACNGT 5 cut(s) 196, 456, 795, 1470, 1556
Bst6I CTCTTC 2 cut(s) 987, 1399
BstAUI TGTACA 1 cut(s) 1117
BstDEI CTNAG 3 cut(s) 99, 575, 597
BstDSI CCRYGG 1 cut(s) 1694
BstF5I GGATG 5 cut(s) 701, 778, 1224, 1422, 1577
BstFNI CGCG 1 cut(s) 1435
BstHHI GCGC 1 cut(s) 1538
BstKTI GATC 7 cut(s) 37, 154, 378, 559, 751, 897, 1710
BstMAI GTCTC 3 cut(s) 272, 760, 1337
BstMBI GATC 7 cut(s) 34, 151, 375, 556, 748, 894, 1707
BstMCI CGRYCG 1 cut(s) 514
BstMWI GCNNNNNNNGC 7 cut(s) 215, 344, 608, 1028, 1262, 1535, 1622
BstNI CCWGG 3 cut(s) 675, 830, 1299
BstNSI RCATGY 3 cut(s) 87, 227, 285
BstSCI CCNGG 4 cut(s) 673, 828, 1297, 1608
BstSFI CTRYAG 4 cut(s) 342, 414, 1509, 1631
BstUI CGCG 1 cut(s) 1435
BstX2I RGATCY 1 cut(s) 151
BstXI CCANNNNNNTGG 1 cut(s) 681
BstYI RGATCY 1 cut(s) 151
Bsu15I ATCGAT 1 cut(s) 540
BsuTUI ATCGAT 1 cut(s) 540
BtgI CCRYGG 1 cut(s) 1694
BtgZI GCGATG 1 cut(s) 1416
BtsCI GGATG 5 cut(s) 701, 778, 1224, 1422, 1577
BtsI GCAGTG 3 cut(s) 321, 840, 1227
BtsIMutI CAGTG 5 cut(s) 192, 299, 321, 840, 1227
CciI TCATGA 1 cut(s) 751
CfoI GCGC 1 cut(s) 1538
Cfr13I GGNCC 1 cut(s) 1576
ClaI ATCGAT 1 cut(s) 540
CseI GACGC 1 cut(s) 809
CsiI ACCWGGT 1 cut(s) 1297
Csp6I GTAC 5 cut(s) 478, 553, 1118, 1295, 1305
CspCI CAANNNNNGTGG 2 cut(s) 1152, 1187
CviQI GTAC 5 cut(s) 478, 553, 1118, 1295, 1305
DdeI CTNAG 3 cut(s) 99, 575, 597
DpnI GATC 7 cut(s) 36, 153, 377, 558, 750, 896, 1709
DpnII GATC 7 cut(s) 34, 151, 375, 556, 748, 894, 1707
Eam1104I CTCTTC 2 cut(s) 987, 1399
EarI CTCTTC 2 cut(s) 987, 1399
Eco130I CCWWGG 2 cut(s) 489, 1694
Eco32I GATATC 1 cut(s) 967
Eco47I GGWCC 1 cut(s) 1576
Eco57I CTGAAG 3 cut(s) 313, 636, 1464
EcoO109I RGGNCCY 1 cut(s) 1576
EcoRI GAATTC 1 cut(s) 506
EcoRII CCWGG 3 cut(s) 673, 828, 1297
EcoRV GATATC 1 cut(s) 967
EcoT14I CCWWGG 2 cut(s) 489, 1694
EcoT22I ATGCAT 1 cut(s) 1244
ErhI CCWWGG 2 cut(s) 489, 1694
FaqI GGGAC 3 cut(s) 465, 1562, 1592
FauNDI CATATG 2 cut(s) 1014, 1704
FbaI TGATCA 3 cut(s) 34, 375, 748
FblI GTMKAC 1 cut(s) 688
FokI GGATG 5 cut(s) 688, 765, 1231, 1409, 1584
FspBI CTAG 5 cut(s) 171, 483, 560, 642, 713
GlaI GCGC 1 cut(s) 1537
HapII CCGG 1 cut(s) 1610
HgaI GACGC 1 cut(s) 809
HhaI GCGC 1 cut(s) 1538
Hin6I GCGC 1 cut(s) 1536
HinP1I GCGC 1 cut(s) 1536
HinfI GANTC 5 cut(s) 138, 157, 571, 690, 1488
HpaII CCGG 1 cut(s) 1610
HphI GGTGA 2 cut(s) 652, 1460
Hpy166II GTNNAC 3 cut(s) 287, 689, 1176
Hpy188I TCNGA 5 cut(s) 156, 655, 888, 1312, 1651
Hpy188III TCNNGA 8 cut(s) 142, 379, 483, 739, 752, 786, 854, 1059
Hpy8I GTNNAC 3 cut(s) 287, 689, 1176
Hpy99I CGWCG 1 cut(s) 803
HpyCH4III ACNGT 5 cut(s) 196, 456, 795, 1470, 1556
HpyCH4IV ACGT 1 cut(s) 680
HpyF10VI GCNNNNNNNGC 7 cut(s) 215, 344, 608, 1028, 1262, 1535, 1622
HpyF3I CTNAG 3 cut(s) 99, 575, 597
HpySE526I ACGT 1 cut(s) 680
HspAI GCGC 1 cut(s) 1536
KflI GGGWCCC 1 cut(s) 1576
Ksp22I TGATCA 3 cut(s) 34, 375, 748
Kzo9I GATC 7 cut(s) 34, 151, 375, 556, 748, 894, 1707
LmnI GCTCC 2 cut(s) 215, 1061
LweI GCATC 3 cut(s) 922, 1502, 1523
MabI ACCWGGT 1 cut(s) 1297
MaeI CTAG 5 cut(s) 171, 483, 560, 642, 713
MaeII ACGT 1 cut(s) 680
MaeIII GTNAC 6 cut(s) 581, 973, 1197, 1436, 1464, 1556
MalI GATC 7 cut(s) 36, 153, 377, 558, 750, 896, 1709
MboI GATC 7 cut(s) 34, 151, 375, 556, 748, 894, 1707
MboII GAAGA 7 cut(s) 272, 394, 580, 922, 1004, 1386, 1653
MfeI CAATTG 2 cut(s) 38, 118
MflI RGATCY 1 cut(s) 151
MhlI GDGCHC 1 cut(s) 840
MlyI GAGTC 3 cut(s) 166, 684, 1482
MmeI TCCRAC 1 cut(s) 480
Mph1103I ATGCAT 1 cut(s) 1244
MroXI GAANNNNTTC 1 cut(s) 649
MseI TTAA 4 cut(s) 20, 78, 843, 860
MslI CAYNNNNRTG 3 cut(s) 756, 918, 1136
MspA1I CMGCKG 2 cut(s) 347, 1283
MspI CCGG 1 cut(s) 1610
MspR9I CCNGG 4 cut(s) 675, 830, 1299, 1610
MunI CAATTG 2 cut(s) 38, 118
MvaI CCWGG 3 cut(s) 675, 830, 1299
MvnI CGCG 1 cut(s) 1435
MwoI GCNNNNNNNGC 7 cut(s) 215, 344, 608, 1028, 1262, 1535, 1622
NciI CCSGG 1 cut(s) 1610
NcoI CCATGG 1 cut(s) 1694
NdeI CATATG 2 cut(s) 1014, 1704
NdeII GATC 7 cut(s) 34, 151, 375, 556, 748, 894, 1707
NlaIV GGNNCC 4 cut(s) 153, 955, 1577, 1578
NmuCI GTSAC 3 cut(s) 581, 973, 1556
NsiI ATGCAT 1 cut(s) 1244
NspI RCATGY 3 cut(s) 87, 227, 285
PagI TCATGA 1 cut(s) 751
PciI ACATGT 3 cut(s) 83, 223, 281
PdmI GAANNNNTTC 1 cut(s) 649
PfeI GAWTC 2 cut(s) 138, 571
PflFI GACNNNGTC 1 cut(s) 194
PfoI TCCNGGA 1 cut(s) 673
PleI GAGTC 3 cut(s) 165, 684, 1482
PpsI GAGTC 3 cut(s) 165, 684, 1482
PpuMI RGGWCCY 1 cut(s) 1576
PscI ACATGT 3 cut(s) 83, 223, 281
PshBI ATTAAT 1 cut(s) 20
PsiI TTATAA 2 cut(s) 50, 606
Psp5II RGGWCCY 1 cut(s) 1576
Psp6I CCWGG 3 cut(s) 673, 828, 1297
PspGI CCWGG 3 cut(s) 673, 828, 1297
PspN4I GGNNCC 4 cut(s) 153, 955, 1577, 1578
PspPI GGNCC 1 cut(s) 1576
PspPPI RGGWCCY 1 cut(s) 1576
PstI CTGCAG 3 cut(s) 346, 418, 1635
PsuI RGATCY 1 cut(s) 151
PsyI GACNNNGTC 1 cut(s) 194
PvuII CAGCTG 2 cut(s) 347, 1283
RsaI GTAC 5 cut(s) 479, 554, 1119, 1296, 1306
RsaNI GTAC 5 cut(s) 478, 553, 1118, 1295, 1305
RseI CAYNNNNRTG 3 cut(s) 756, 918, 1136
SaqAI TTAA 4 cut(s) 20, 78, 843, 860
Sau3AI GATC 7 cut(s) 34, 151, 375, 556, 748, 894, 1707
Sau96I GGNCC 1 cut(s) 1576
SchI GAGTC 3 cut(s) 166, 684, 1482
ScrFI CCNGG 4 cut(s) 675, 830, 1299, 1610
SduI GDGCHC 1 cut(s) 840
SexAI ACCWGGT 1 cut(s) 1297
SfaNI GCATC 3 cut(s) 922, 1502, 1523
SfcI CTRYAG 4 cut(s) 342, 414, 1509, 1631
SinI GGWCC 1 cut(s) 1576
SmiMI CAYNNNNRTG 3 cut(s) 756, 918, 1136
SmlI CTYRAG 1 cut(s) 739
SmoI CTYRAG 1 cut(s) 739
SpeI ACTAGT 1 cut(s) 712
SsiI CCGC 2 cut(s) 514, 1253
SspMI CTAG 5 cut(s) 171, 483, 560, 642, 713
StyD4I CCNGG 4 cut(s) 673, 828, 1297, 1608
StyI CCWWGG 2 cut(s) 489, 1694
TaaI ACNGT 5 cut(s) 196, 456, 795, 1470, 1556
TaiI ACGT 1 cut(s) 683
TaqI TCGA 6 cut(s) 249, 406, 510, 540, 798, 1710
TatI WGTACW 2 cut(s) 477, 1117
TauI GCSGC 1 cut(s) 1256
TfiI GAWTC 2 cut(s) 138, 571
Tru1I TTAA 4 cut(s) 20, 78, 843, 860
Tru9I TTAA 4 cut(s) 20, 78, 843, 860
TscAI CASTG 5 cut(s) 199, 306, 328, 840, 1234
TseFI GTSAC 3 cut(s) 581, 973, 1556
Tsp45I GTSAC 3 cut(s) 581, 973, 1556
TspDTI ATGAA 7 cut(s) 1005, 1154, 1203, 1227, 1235, 1411, 1492
TspRI CASTG 5 cut(s) 199, 306, 328, 840, 1234
Tth111I GACNNNGTC 1 cut(s) 194
VpaK11BI GGWCC 1 cut(s) 1576
VspI ATTAAT 1 cut(s) 20
XapI RAATTY 1 cut(s) 506
XbaI TCTAGA 1 cut(s) 482
XceI RCATGY 3 cut(s) 87, 227, 285
XcmI CCANNNNNNNNNTGG 1 cut(s) 496
XmiI GTMKAC 1 cut(s) 688
XmnI GAANNNNTTC 1 cut(s) 649
XspI CTAG 5 cut(s) 171, 483, 560, 642, 713
Zsp2I ATGCAT 1 cut(s) 1244
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.