protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 170 |
| AclWI | GGATC | 3 cut(s) | 75, 302, 315 |
| AcsI | RAATTY | 1 cut(s) | 216 |
| AfaI | GTAC | 1 cut(s) | 258 |
| AjnI | CCWGG | 1 cut(s) | 23 |
| Alw26I | GTCTC | 1 cut(s) | 21 |
| AlwI | GGATC | 3 cut(s) | 75, 302, 315 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 212 |
| ApoI | RAATTY | 1 cut(s) | 216 |
| AspLEI | GCGC | 1 cut(s) | 70 |
| AsuHPI | GGTGA | 1 cut(s) | 355 |
| AxyI | CCTNAGG | 1 cut(s) | 368 |
| BaeGI | GKGCMC | 1 cut(s) | 367 |
| BamHI | GGATCC | 1 cut(s) | 307 |
| BccI | CCATC | 2 cut(s) | 184, 334 |
| BciT130I | CCWGG | 1 cut(s) | 25 |
| BclI | TGATCA | 1 cut(s) | 91 |
| BcoDI | GTCTC | 1 cut(s) | 21 |
| BfaI | CTAG | 1 cut(s) | 329 |
| Bme1390I | CCNGG | 1 cut(s) | 25 |
| BmiI | GGNNCC | 1 cut(s) | 309 |
| BmrFI | CCNGG | 1 cut(s) | 25 |
| BmsI | GCATC | 1 cut(s) | 293 |
| Bsa29I | ATCGAT | 1 cut(s) | 105 |
| BsaBI | GATNNNNATC | 1 cut(s) | 306 |
| BsaI | GGTCTC | 1 cut(s) | 21 |
| Bse21I | CCTNAGG | 1 cut(s) | 368 |
| Bse8I | GATNNNNATC | 1 cut(s) | 306 |
| BseBI | CCWGG | 1 cut(s) | 25 |
| BseCI | ATCGAT | 1 cut(s) | 105 |
| BseGI | GGATG | 2 cut(s) | 176, 307 |
| BseJI | GATNNNNATC | 1 cut(s) | 306 |
| BseMII | CTCAG | 3 cut(s) | 21, 62, 156 |
| BseSI | GKGCMC | 1 cut(s) | 367 |
| BshVI | ATCGAT | 1 cut(s) | 105 |
| BsmAI | GTCTC | 1 cut(s) | 21 |
| Bso31I | GGTCTC | 1 cut(s) | 21 |
| Bsp1286I | GDGCHC | 1 cut(s) | 367 |
| Bsp143I | GATC | 3 cut(s) | 80, 91, 307 |
| BspCNI | CTCAG | 3 cut(s) | 22, 63, 157 |
| BspDI | ATCGAT | 1 cut(s) | 105 |
| BspHI | TCATGA | 1 cut(s) | 352 |
| BspLI | GGNNCC | 1 cut(s) | 309 |
| BspPI | GGATC | 3 cut(s) | 75, 302, 315 |
| BspTNI | GGTCTC | 1 cut(s) | 21 |
| BssMI | GATC | 3 cut(s) | 80, 91, 307 |
| Bst2UI | CCWGG | 1 cut(s) | 25 |
| Bst4CI | ACNGT | 3 cut(s) | 123, 138, 233 |
| Bst6I | CTCTTC | 1 cut(s) | 32 |
| BstC8I | GCNNGC | 2 cut(s) | 117, 204 |
| BstDEI | CTNAG | 4 cut(s) | 30, 71, 165, 368 |
| BstF5I | GGATG | 2 cut(s) | 176, 307 |
| BstHHI | GCGC | 1 cut(s) | 70 |
| BstKTI | GATC | 3 cut(s) | 83, 94, 310 |
| BstMAI | GTCTC | 1 cut(s) | 21 |
| BstMBI | GATC | 3 cut(s) | 80, 91, 307 |
| BstNI | CCWGG | 1 cut(s) | 25 |
| BstSCI | CCNGG | 1 cut(s) | 23 |
| BstSLI | GKGCMC | 1 cut(s) | 367 |
| BstX2I | RGATCY | 1 cut(s) | 307 |
| BstYI | RGATCY | 1 cut(s) | 307 |
| Bsu15I | ATCGAT | 1 cut(s) | 105 |
| Bsu36I | CCTNAGG | 1 cut(s) | 368 |
| BsuTUI | ATCGAT | 1 cut(s) | 105 |
| BtsCI | GGATG | 2 cut(s) | 176, 307 |
| Cac8I | GCNNGC | 2 cut(s) | 117, 204 |
| CaiI | CAGNNNCTG | 1 cut(s) | 212 |
| CciI | TCATGA | 1 cut(s) | 352 |
| CfoI | GCGC | 1 cut(s) | 70 |
| ClaI | ATCGAT | 1 cut(s) | 105 |
| Csp6I | GTAC | 1 cut(s) | 257 |
| CviAII | CATG | 1 cut(s) | 353 |
| CviQI | GTAC | 1 cut(s) | 257 |
| DdeI | CTNAG | 4 cut(s) | 30, 71, 165, 368 |
| DpnI | GATC | 3 cut(s) | 82, 93, 309 |
| DpnII | GATC | 3 cut(s) | 80, 91, 307 |
| Eam1104I | CTCTTC | 1 cut(s) | 32 |
| EarI | CTCTTC | 1 cut(s) | 32 |
| Eco31I | GGTCTC | 1 cut(s) | 21 |
| Eco81I | CCTNAGG | 1 cut(s) | 368 |
| EcoRII | CCWGG | 1 cut(s) | 23 |
| FaeI | CATG | 1 cut(s) | 356 |
| FaiI | YATR | 7 cut(s) | 152, 189, 236, 281, 296, 325, 354 |
| FatI | CATG | 1 cut(s) | 352 |
| FbaI | TGATCA | 1 cut(s) | 91 |
| FblI | GTMKAC | 1 cut(s) | 170 |
| FokI | GGATG | 2 cut(s) | 163, 314 |
| FspBI | CTAG | 1 cut(s) | 329 |
| GlaI | GCGC | 1 cut(s) | 69 |
| HhaI | GCGC | 1 cut(s) | 70 |
| Hin1II | CATG | 1 cut(s) | 356 |
| Hin6I | GCGC | 1 cut(s) | 68 |
| HinP1I | GCGC | 1 cut(s) | 68 |
| HinfI | GANTC | 8 cut(s) | 49, 73, 161, 167, 209, 245, 251, 317 |
| HphI | GGTGA | 1 cut(s) | 355 |
| Hpy166II | GTNNAC | 1 cut(s) | 171 |
| Hpy188I | TCNGA | 5 cut(s) | 31, 91, 166, 214, 250 |
| Hpy188III | TCNNGA | 1 cut(s) | 353 |
| Hpy8I | GTNNAC | 1 cut(s) | 171 |
| HpyAV | CCTTC | 1 cut(s) | 268 |
| HpyCH4III | ACNGT | 3 cut(s) | 123, 138, 233 |
| HpyCH4V | TGCA | 1 cut(s) | 185 |
| HpyF3I | CTNAG | 4 cut(s) | 30, 71, 165, 368 |
| Hsp92II | CATG | 1 cut(s) | 356 |
| HspAI | GCGC | 1 cut(s) | 68 |
| Ksp22I | TGATCA | 1 cut(s) | 91 |
| Kzo9I | GATC | 3 cut(s) | 80, 91, 307 |
| LmnI | GCTCC | 1 cut(s) | 112 |
| LpnPI | CCDG | 6 cut(s) | 10, 37, 101, 111, 188, 284 |
| LweI | GCATC | 1 cut(s) | 293 |
| MaeI | CTAG | 1 cut(s) | 329 |
| MaeIII | GTNAC | 1 cut(s) | 96 |
| MalI | GATC | 3 cut(s) | 82, 93, 309 |
| MboI | GATC | 3 cut(s) | 80, 91, 307 |
| MboII | GAAGA | 2 cut(s) | 46, 49 |
| MflI | RGATCY | 1 cut(s) | 307 |
| MhlI | GDGCHC | 1 cut(s) | 367 |
| MluCI | AATT | 2 cut(s) | 216, 346 |
| MlyI | GAGTC | 6 cut(s) | 58, 82, 176, 218, 260, 326 |
| MmeI | TCCRAC | 3 cut(s) | 138, 222, 313 |
| MnlI | CCTC | 5 cut(s) | 6, 38, 87, 94, 271 |
| MseI | TTAA | 3 cut(s) | 132, 140, 224 |
| MslI | CAYNNNNRTG | 1 cut(s) | 192 |
| MspR9I | CCNGG | 1 cut(s) | 25 |
| MvaI | CCWGG | 1 cut(s) | 25 |
| NdeII | GATC | 3 cut(s) | 80, 91, 307 |
| NlaIII | CATG | 1 cut(s) | 356 |
| NlaIV | GGNNCC | 1 cut(s) | 309 |
| NmuCI | GTSAC | 1 cut(s) | 96 |
| PagI | TCATGA | 1 cut(s) | 352 |
| PfeI | GAWTC | 2 cut(s) | 161, 245 |
| PleI | GAGTC | 6 cut(s) | 57, 81, 175, 217, 259, 325 |
| PpsI | GAGTC | 6 cut(s) | 57, 81, 175, 217, 259, 325 |
| Psp6I | CCWGG | 1 cut(s) | 23 |
| PspGI | CCWGG | 1 cut(s) | 23 |
| PspN4I | GGNNCC | 1 cut(s) | 309 |
| PstNI | CAGNNNCTG | 1 cut(s) | 212 |
| PsuI | RGATCY | 1 cut(s) | 307 |
| RsaI | GTAC | 1 cut(s) | 258 |
| RsaNI | GTAC | 1 cut(s) | 257 |
| RseI | CAYNNNNRTG | 1 cut(s) | 192 |
| SaqAI | TTAA | 3 cut(s) | 132, 140, 224 |
| Sau3AI | GATC | 3 cut(s) | 80, 91, 307 |
| SchI | GAGTC | 6 cut(s) | 58, 82, 176, 218, 260, 326 |
| ScrFI | CCNGG | 1 cut(s) | 25 |
| SduI | GDGCHC | 1 cut(s) | 367 |
| SetI | ASST | 2 cut(s) | 17, 374 |
| SfaNI | GCATC | 1 cut(s) | 293 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 192 |
| Sse9I | AATT | 2 cut(s) | 216, 346 |
| SspMI | CTAG | 1 cut(s) | 329 |
| StyD4I | CCNGG | 1 cut(s) | 23 |
| TaaI | ACNGT | 3 cut(s) | 123, 138, 233 |
| TaqI | TCGA | 2 cut(s) | 79, 105 |
| TasI | AATT | 2 cut(s) | 216, 346 |
| TfiI | GAWTC | 2 cut(s) | 161, 245 |
| Tru1I | TTAA | 3 cut(s) | 132, 140, 224 |
| Tru9I | TTAA | 3 cut(s) | 132, 140, 224 |
| TseFI | GTSAC | 1 cut(s) | 96 |
| Tsp45I | GTSAC | 1 cut(s) | 96 |
| TspDTI | ATGAA | 4 cut(s) | 167, 210, 251, 369 |
| XapI | RAATTY | 1 cut(s) | 216 |
| XmiI | GTMKAC | 1 cut(s) | 170 |
| XspI | CTAG | 1 cut(s) | 329 |