Rw5G028210

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000157
Physical Location & Seq
Reverse (-)
42523656 .. 42526425
2770 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G028210.1

Sequence Viewer

Length: 1866 bp
ATGTCTATCCCACAAGCAGAACATGTAGCACCTACTGGAATTCAATTAACCACGGCTCGTGGCAATTCAGTAACTGGGATAGACAACCAATCTACAAAATTCACTGCCATCGACATTTTGGCTGATGCGGCTCAACTAAACAGACCTTCACCTCATCTACTAGAACATAAAAATAGAGAAAAATACCTCAAGACTTGTGTTGCCCTCTATAAGCATGCACTAAAGGGCGACTGGGAAGCCGCTGAACAAATCTTGAAAGAGGATAGGTCCCTTCTGAGTGCTAGCATAACAAGATCAGGATGTGAAACAGTTCTTCACGTTGCAGCAGGATCAAGACATATCCACTTTGTGCAGAAACTGGTCAACATGATGGACAAAGAACACTTGGTACTGCAAGACATAAATGGAAACACTGCCTTGTGCATTGCCGCTGCGGCTGGATCTCTAGACATTGTCCAGATTTTGATAGACCATAATAATTCTTTGCTGACAATTCGAGGTGGTAAAGATATGGCACCACCCTACATGGCTGCTGTATTAGGACAGTCGGAAATGGCATGTTACCTGTACAACAAAAGTGAAAAGATGTTGGAGATAACCGACCGAGAAAACTTGTTTTTTTCTTCCATTAACAACGGTCTGTACGATTTGGCCTTTCAGTTGCTAGTTGCTGATAAAGCATTAGCGAAGGCACGTACTAGTTCGCAGAAAAATAAAACGGCCTTGCATATCTTGGCTCGAAGACCTTCAGCATTTGGTGGCAGCCAAAGTCCACGAATGTGGACTAGACTCATTAAGTCATTACTCCCAGGTTTGAAGTTTGCATGCAAAACAAAGTTGAAAGAAGCTAATGGAGCCCTTCAACTAGTCTGCCGCCTCTGGGAAGAAATCTTGAGAGACGAGCATGATAACGTGATGAGGCTGATCAAATTTCCAACAAACTTGCTATTTGACGCAGCAGAATTAGGGAATTATGAGTTCCTAGCGGCACTTATGAGCTCTTATCCTGAGTTAGTTTGGGAAACTGATGAAAATAATCGAACTATAATCCATGTCGCAGTTTTGCATCGTCACGCAGGTATCTTCAATCTAGTGCATGAGATAGGTTCAATCAGGGATGTCATAGTGACATATAAGGATCATCAGGGTAACAATATTGTGCATATGGCTGCAAAATTAGCACCTCAAAATCAACTAAATCTCGTGTCAGGCGTAGCTCTTCAAATGCAGCGAGAGTTAGTATGGTTTGAGGAAGTCAAAACAATTGTCCAACCTCAATACATAGAGATGGAAAACAACCAAGGAAAAACTCCTCAAGAATTATTCACTGAAGAGCATATGGTGTTAATGCGTCGAGGAGAAAAATGGATGAAGGTTACTGCAACTTCATGTATGCTAGTTGCAACTATTATCGCAACCGTTGTGTTCTCAGCTGCATTTAGCATACCTGGTGGCATAGATGATCATACCGGAAAGCCAAACTTTTTGAAAAAGAAGGCCTTTCTAGACTTTACCATAGCTGATGAAGTAGCACTCTTGTCCTCTTCAACTGCAATGCTGATGTTCTTGTTCATCCTTACCTCGCGGTATGCAGAAAATGATTTCCTCAAGTCCTTGCCCTTGAAGTTGATGGTAGGACTCACTTGCCTTTTCATCTCTATAGCATCTATGATGATGGCTTTCAGCACTGCGTTATATTTGTCTTGTCAATATGGATCAAAATGGGTCCCAGATCTTACATTTATATTTGCAGTTCTCCCTGTTGCTTTGTATGCGTTTATGCAGTTCCCTCTCATGTCTGATATGTCCTCTTCAACATTTTGTTCAAGTCTTTTATTTCAGCCATGGAAACGTATGATATACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

621

Amino Acids

69.51

Weight (kDa)

7.63

Isoelectric Point (pI)

41.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 73 - 159 2.1e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 105 - 192 5.8e-10 Ankyrin repeats (3 copies)
PGG PF13962 454 - 567 1e-25 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1067
AccB1I GGYRCC 1 cut(s) 514
AccII CGCG 1 cut(s) 1585
AciI CCGC 7 cut(s) 128, 240, 429, 434, 874, 986, 1585
AclWI GGATC 4 cut(s) 337, 448, 1146, 1723
AcsI RAATTY 3 cut(s) 39, 98, 929
AcuI CTGAAG 2 cut(s) 732, 1350
AdeI CACNNNGTG 1 cut(s) 349
AfaI GTAC 4 cut(s) 390, 569, 644, 697
AfiI CCNNNNNNNGG 1 cut(s) 880
AflIII ACRYGT 1 cut(s) 22
AhlI ACTAGT 2 cut(s) 698, 865
AjnI CCWGG 2 cut(s) 808, 1447
AleI CACNNNNGTG 1 cut(s) 778
AluBI AGCT 5 cut(s) 848, 999, 1217, 1433, 1520
AluI AGCT 5 cut(s) 848, 999, 1217, 1433, 1520
Alw21I GWGCWC 1 cut(s) 1001
Alw26I GTCTC 1 cut(s) 891
AlwI GGATC 4 cut(s) 337, 448, 1146, 1723
AlwNI CAGNNNCTG 2 cut(s) 74, 358
AoxI GGCC 3 cut(s) 651, 720, 1497
ApeKI GCWGC 8 cut(s) 323, 431, 530, 762, 956, 1169, 1228, 1433
ApoI RAATTY 3 cut(s) 39, 98, 929
ArsI GACNNNNNNTTYG 2 cut(s) 1251, 1283
Asp700I GAANNNNTTC 2 cut(s) 309, 745
AspS9I GGNCC 2 cut(s) 267, 1726
AsuHPI GGTGA 1 cut(s) 141
AsuNHI GCTAGC 1 cut(s) 281
AvaII GGWCC 2 cut(s) 267, 1726
BaeI ACNNNNGTAYC 2 cut(s) 1063, 1096
BanI GGYRCC 1 cut(s) 514
BanII GRGCYC 2 cut(s) 859, 1001
BauI CACGAG 2 cut(s) 57, 1202
BbsI GAAGAC 1 cut(s) 748
Bbv12I GWGCWC 1 cut(s) 1001
BbvI GCAGC 8 cut(s) 335, 418, 517, 774, 968, 1156, 1240, 1420
BccI CCATC 5 cut(s) 116, 364, 1282, 1624, 1669
BceAI ACGGC 2 cut(s) 69, 735
BciT130I CCWGG 2 cut(s) 810, 1449
BclI TGATCA 2 cut(s) 924, 1462
BcoDI GTCTC 1 cut(s) 891
BcuI ACTAGT 2 cut(s) 698, 865
BfmI CTRYAG 1 cut(s) 1659
BfuAI ACCTGC 1 cut(s) 1067
BglI GCCNNNNNGGC 1 cut(s) 434
BglII AGATCT 1 cut(s) 1732
Bme1390I CCNGG 2 cut(s) 810, 1449
Bme18I GGWCC 2 cut(s) 267, 1726
BmgT120I GGNCC 2 cut(s) 267, 1726
BmiI GGNNCC 5 cut(s) 269, 516, 856, 1727, 1728
BmrFI CCNGG 2 cut(s) 810, 1449
BmrI ACTGGG 2 cut(s) 84, 241
BmsI GCATC 3 cut(s) 115, 1075, 1673
BmtI GCTAGC 1 cut(s) 285
BmuI ACTGGG 2 cut(s) 84, 241
BpiI GAAGAC 1 cut(s) 748
BpuEI CTTGAG 4 cut(s) 173, 913, 1299, 1592
BsaAI YACGTR 1 cut(s) 695
BsaJI CCNNGG 4 cut(s) 51, 808, 1300, 1844
BsaWI WCCGGW 1 cut(s) 1469
Bsc4I CCNNNNNNNGG 1 cut(s) 880
Bse1I ACTGG 4 cut(s) 40, 79, 236, 363
Bse3DI GCAATG 2 cut(s) 423, 1560
BseBI CCWGG 2 cut(s) 810, 1449
BseDI CCNNGG 4 cut(s) 51, 808, 1300, 1844
BseGI GGATG 4 cut(s) 305, 1123, 1374, 1572
BseLI CCNNNNNNNGG 1 cut(s) 880
BseMI GCAATG 2 cut(s) 423, 1560
BseMII CTCAG 3 cut(s) 266, 999, 1443
BseNI ACTGG 4 cut(s) 40, 79, 236, 363
BseRI GAGGAG 2 cut(s) 1302, 1371
BseXI GCAGC 8 cut(s) 335, 418, 517, 774, 968, 1156, 1240, 1420
BsgI GTGCAG 1 cut(s) 371
Bsh1236I CGCG 1 cut(s) 1585
Bsh1285I CGRYCG 1 cut(s) 604
BshFI GGCC 3 cut(s) 653, 722, 1499
BshNI GGYRCC 1 cut(s) 514
BsiEI CGRYCG 1 cut(s) 604
BsiHKAI GWGCWC 1 cut(s) 1001
BsiSI CCGG 1 cut(s) 1470
BslFI GGGAC 2 cut(s) 253, 1712
BslI CCNNNNNNNGG 1 cut(s) 880
BsmAI GTCTC 1 cut(s) 891
BsmBI CGTCTC 1 cut(s) 891
BsmFI GGGAC 2 cut(s) 253, 1712
BsnI GGCC 3 cut(s) 653, 722, 1499
Bsp1286I GDGCHC 2 cut(s) 859, 1001
Bsp1407I TGTACA 1 cut(s) 567
Bsp143I GATC 8 cut(s) 293, 329, 440, 924, 1138, 1462, 1715, 1732
Bsp19I CCATGG 1 cut(s) 1844
BspACI CCGC 7 cut(s) 128, 240, 429, 434, 874, 986, 1585
BspANI GGCC 3 cut(s) 653, 722, 1499
BspCNI CTCAG 3 cut(s) 267, 1000, 1442
BspFNI CGCG 1 cut(s) 1585
BspLI GGNNCC 5 cut(s) 269, 516, 856, 1727, 1728
BspMI ACCTGC 1 cut(s) 1067
BspOI GCTAGC 1 cut(s) 285
BspPI GGATC 4 cut(s) 337, 448, 1146, 1723
BspQI GCTCTTC 2 cut(s) 1224, 1326
BspT107I GGYRCC 1 cut(s) 514
BsrDI GCAATG 2 cut(s) 423, 1560
BsrGI TGTACA 1 cut(s) 567
BsrI ACTGG 4 cut(s) 40, 79, 236, 363
BssECI CCNNGG 4 cut(s) 51, 808, 1300, 1844
BssMI GATC 8 cut(s) 293, 329, 440, 924, 1138, 1462, 1715, 1732
BssSI CACGAG 2 cut(s) 57, 1202
BssT1I CCWWGG 2 cut(s) 1300, 1844
Bst2BI CACGAG 2 cut(s) 57, 1202
Bst2UI CCWGG 2 cut(s) 810, 1449
Bst4CI ACNGT 4 cut(s) 310, 546, 638, 1420
Bst6I CTCTTC 4 cut(s) 1224, 1326, 1549, 1816
BstAUI TGTACA 1 cut(s) 567
BstBAI YACGTR 1 cut(s) 695
BstC8I GCNNGC 3 cut(s) 216, 283, 826
BstDEI CTNAG 3 cut(s) 275, 1008, 1429
BstDSI CCRYGG 2 cut(s) 51, 1844
BstF5I GGATG 4 cut(s) 305, 1123, 1374, 1572
BstFNI CGCG 1 cut(s) 1585
BstKTI GATC 8 cut(s) 296, 332, 443, 927, 1141, 1465, 1718, 1735
BstMAI GTCTC 1 cut(s) 891
BstMBI GATC 8 cut(s) 293, 329, 440, 924, 1138, 1462, 1715, 1732
BstMCI CGRYCG 1 cut(s) 604
BstMWI GCNNNNNNNGC 6 cut(s) 128, 434, 677, 854, 1178, 1772
BstNI CCWGG 2 cut(s) 810, 1449
BstNSI RCATGY 4 cut(s) 26, 218, 561, 828
BstSCI CCNGG 2 cut(s) 808, 1447
BstSFI CTRYAG 1 cut(s) 1659
BstUI CGCG 1 cut(s) 1585
BstV1I GCAGC 8 cut(s) 335, 418, 517, 774, 968, 1156, 1240, 1420
BstV2I GAAGAC 1 cut(s) 748
BstX2I RGATCY 2 cut(s) 440, 1732
BstXI CCANNNNNNTGG 1 cut(s) 780
BstYI RGATCY 2 cut(s) 440, 1732
BsuRI GGCC 3 cut(s) 653, 722, 1499
BtgI CCRYGG 2 cut(s) 51, 1844
BtsCI GGATG 4 cut(s) 305, 1123, 1374, 1572
BtsI GCAGTG 3 cut(s) 102, 411, 1686
BtsIMutI CAGTG 4 cut(s) 102, 411, 1326, 1686
BveI ACCTGC 1 cut(s) 1067
Cac8I GCNNGC 3 cut(s) 216, 283, 826
CaiI CAGNNNCTG 2 cut(s) 74, 358
Cfr13I GGNCC 2 cut(s) 267, 1726
CseI GACGC 2 cut(s) 962, 1340
CsiI ACCWGGT 1 cut(s) 1447
Csp6I GTAC 4 cut(s) 389, 568, 643, 696
CviQI GTAC 4 cut(s) 389, 568, 643, 696
DdeI CTNAG 3 cut(s) 275, 1008, 1429
DpnI GATC 8 cut(s) 295, 331, 442, 926, 1140, 1464, 1717, 1734
DpnII GATC 8 cut(s) 293, 329, 440, 924, 1138, 1462, 1715, 1732
DraIII CACNNNGTG 1 cut(s) 349
Eam1104I CTCTTC 4 cut(s) 1224, 1326, 1549, 1816
EarI CTCTTC 4 cut(s) 1224, 1326, 1549, 1816
Ecl136II GAGCTC 1 cut(s) 999
Eco130I CCWWGG 2 cut(s) 1300, 1844
Eco147I AGGCCT 1 cut(s) 1499
Eco24I GRGCYC 2 cut(s) 859, 1001
Eco47I GGWCC 2 cut(s) 267, 1726
Eco53kI GAGCTC 1 cut(s) 999
Eco57I CTGAAG 2 cut(s) 732, 1350
EcoICRI GAGCTC 1 cut(s) 999
EcoO109I RGGNCCY 2 cut(s) 267, 1726
EcoRI GAATTC 1 cut(s) 39
EcoRII CCWGG 2 cut(s) 808, 1447
EcoT14I CCWWGG 2 cut(s) 1300, 1844
EcoT38I GRGCYC 2 cut(s) 859, 1001
ErhI CCWWGG 2 cut(s) 1300, 1844
Esp3I CGTCTC 1 cut(s) 891
FalI AAGNNNNNCTT 4 cut(s) 1466, 1498, 1484, 1516
FaqI GGGAC 2 cut(s) 253, 1712
FauNDI CATATG 2 cut(s) 1164, 1338
FbaI TGATCA 2 cut(s) 924, 1462
FokI GGATG 4 cut(s) 312, 1130, 1381, 1559
FriOI GRGCYC 2 cut(s) 859, 1001
HaeIII GGCC 3 cut(s) 653, 722, 1499
HapII CCGG 1 cut(s) 1470
HgaI GACGC 2 cut(s) 962, 1340
HincII GTYRAC 1 cut(s) 364
HindII GTYRAC 1 cut(s) 364
HinfI GANTC 2 cut(s) 789, 1638
HpaII CCGG 1 cut(s) 1470
HphI GGTGA 1 cut(s) 141
Hpy166II GTNNAC 3 cut(s) 364, 773, 783
Hpy188I TCNGA 3 cut(s) 276, 550, 1801
Hpy8I GTNNAC 3 cut(s) 364, 773, 783
Hpy99I CGWCG 1 cut(s) 1356
HpyAV CCTTC 7 cut(s) 156, 281, 682, 756, 869, 1366, 1489
HpyCH4III ACNGT 4 cut(s) 310, 546, 638, 1420
HpyCH4IV ACGT 4 cut(s) 318, 694, 912, 1852
HpyF10VI GCNNNNNNNGC 6 cut(s) 128, 434, 677, 854, 1178, 1772
HpyF3I CTNAG 3 cut(s) 275, 1008, 1429
HpySE526I ACGT 4 cut(s) 318, 694, 912, 1852
KflI GGGWCCC 1 cut(s) 1726
Ksp22I TGATCA 2 cut(s) 924, 1462
Kzo9I GATC 8 cut(s) 293, 329, 440, 924, 1138, 1462, 1715, 1732
LguI GCTCTTC 2 cut(s) 1224, 1326
LmnI GCTCC 1 cut(s) 854
Lsp1109I GCAGC 8 cut(s) 335, 418, 517, 774, 968, 1156, 1240, 1420
LweI GCATC 3 cut(s) 115, 1075, 1673
MabI ACCWGGT 1 cut(s) 1447
MaeII ACGT 4 cut(s) 318, 694, 912, 1852
MaeIII GTNAC 6 cut(s) 70, 560, 1070, 1126, 1148, 1375
MalI GATC 8 cut(s) 295, 331, 442, 926, 1140, 1464, 1717, 1734
MboI GATC 8 cut(s) 293, 329, 440, 924, 1138, 1462, 1715, 1732
MboII GAAGA 9 cut(s) 305, 615, 753, 896, 1075, 1211, 1343, 1536, 1803
MfeI CAATTG 1 cut(s) 1263
MflI RGATCY 2 cut(s) 440, 1732
MhlI GDGCHC 2 cut(s) 859, 1001
MlyI GAGTC 2 cut(s) 783, 1632
MmeI TCCRAC 4 cut(s) 528, 570, 959, 1294
MroXI GAANNNNTTC 2 cut(s) 309, 745
MseI TTAA 4 cut(s) 47, 630, 795, 1346
MslI CAYNNNNRTG 2 cut(s) 778, 1286
MspA1I CMGCKG 3 cut(s) 242, 431, 1433
MspI CCGG 1 cut(s) 1470
MspR9I CCNGG 2 cut(s) 810, 1449
MunI CAATTG 1 cut(s) 1263
MvaI CCWGG 2 cut(s) 810, 1449
MvnI CGCG 1 cut(s) 1585
MwoI GCNNNNNNNGC 6 cut(s) 128, 434, 677, 854, 1178, 1772
NcoI CCATGG 1 cut(s) 1844
NdeI CATATG 2 cut(s) 1164, 1338
NdeII GATC 8 cut(s) 293, 329, 440, 924, 1138, 1462, 1715, 1732
NheI GCTAGC 1 cut(s) 281
NlaIV GGNNCC 5 cut(s) 269, 516, 856, 1727, 1728
NmuCI GTSAC 2 cut(s) 1070, 1126
NspI RCATGY 4 cut(s) 26, 218, 561, 828
OliI CACNNNNGTG 1 cut(s) 778
PaeI GCATGC 2 cut(s) 218, 828
PceI AGGCCT 1 cut(s) 1499
PciI ACATGT 1 cut(s) 22
PciSI GCTCTTC 2 cut(s) 1224, 1326
PcsI WCGNNNNNNNCGW 2 cut(s) 642, 1209
PdmI GAANNNNTTC 2 cut(s) 309, 745
PflFI GACNNNGTC 1 cut(s) 452
PleI GAGTC 2 cut(s) 783, 1632
PpsI GAGTC 2 cut(s) 783, 1632
Ppu21I YACGTR 1 cut(s) 695
PpuMI RGGWCCY 2 cut(s) 267, 1726
PscI ACATGT 1 cut(s) 22
Psp124BI GAGCTC 1 cut(s) 1001
Psp5II RGGWCCY 2 cut(s) 267, 1726
Psp6I CCWGG 2 cut(s) 808, 1447
PspGI CCWGG 2 cut(s) 808, 1447
PspN4I GGNNCC 5 cut(s) 269, 516, 856, 1727, 1728
PspPI GGNCC 2 cut(s) 267, 1726
PspPPI RGGWCCY 2 cut(s) 267, 1726
PsrI GAACNNNNNNTAC 2 cut(s) 372, 404
PstNI CAGNNNCTG 2 cut(s) 74, 358
PsuI RGATCY 2 cut(s) 440, 1732
PsyI GACNNNGTC 1 cut(s) 452
PvuII CAGCTG 1 cut(s) 1433
RsaI GTAC 4 cut(s) 390, 569, 644, 697
RsaNI GTAC 4 cut(s) 389, 568, 643, 696
RseI CAYNNNNRTG 2 cut(s) 778, 1286
SacI GAGCTC 1 cut(s) 1001
SapI GCTCTTC 2 cut(s) 1224, 1326
SaqAI TTAA 4 cut(s) 47, 630, 795, 1346
Sau3AI GATC 8 cut(s) 293, 329, 440, 924, 1138, 1462, 1715, 1732
Sau96I GGNCC 2 cut(s) 267, 1726
SchI GAGTC 2 cut(s) 783, 1632
ScrFI CCNGG 2 cut(s) 810, 1449
SduI GDGCHC 2 cut(s) 859, 1001
SexAI ACCWGGT 1 cut(s) 1447
SfaNI GCATC 3 cut(s) 115, 1075, 1673
SfcI CTRYAG 1 cut(s) 1659
SinI GGWCC 2 cut(s) 267, 1726
SmiMI CAYNNNNRTG 2 cut(s) 778, 1286
SmlI CTYRAG 4 cut(s) 188, 892, 1314, 1607
SmoI CTYRAG 4 cut(s) 188, 892, 1314, 1607
SpeI ACTAGT 2 cut(s) 698, 865
SphI GCATGC 2 cut(s) 218, 828
SseBI AGGCCT 1 cut(s) 1499
SsiI CCGC 7 cut(s) 128, 240, 429, 434, 874, 986, 1585
SspI AATATT 1 cut(s) 1156
SstI GAGCTC 1 cut(s) 1001
StuI AGGCCT 1 cut(s) 1499
StyD4I CCNGG 2 cut(s) 808, 1447
StyI CCWWGG 2 cut(s) 1300, 1844
TaaI ACNGT 4 cut(s) 310, 546, 638, 1420
TaiI ACGT 4 cut(s) 321, 697, 915, 1855
TaqI TCGA 5 cut(s) 111, 496, 739, 1039, 1354
TaqII GACCGA 1 cut(s) 618
TatI WGTACW 1 cut(s) 567
TauI GCSGC 6 cut(s) 131, 242, 431, 437, 876, 989
Tru1I TTAA 4 cut(s) 47, 630, 795, 1346
Tru9I TTAA 4 cut(s) 47, 630, 795, 1346
TscAI CASTG 4 cut(s) 109, 418, 1333, 1693
TseFI GTSAC 2 cut(s) 1070, 1126
TseI GCWGC 8 cut(s) 323, 431, 530, 762, 956, 1169, 1228, 1433
Tsp45I GTSAC 2 cut(s) 1070, 1126
TspDTI ATGAA 6 cut(s) 1044, 1377, 1385, 1539, 1561, 1642
TspRI CASTG 4 cut(s) 109, 418, 1333, 1693
Tth111I GACNNNGTC 1 cut(s) 452
VpaK11BI GGWCC 2 cut(s) 267, 1726
XapI RAATTY 3 cut(s) 39, 98, 929
XbaI TCTAGA 2 cut(s) 445, 1504
XceI RCATGY 4 cut(s) 26, 218, 561, 828
XcmI CCANNNNNNNNNTGG 1 cut(s) 115
XmnI GAANNNNTTC 2 cut(s) 309, 745
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.