Rh1DG015300

protein ubiquitination

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0000157
Physical Location & Seq
Forward (+)
2580744 .. 2612237
31494 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG015300.1

Sequence Viewer

Length: 1965 bp
ATGTCGGCGGCGACGAGGACGATCGGATTGAACAAGGAGGTGATGGTTCGGGGTCTCGGTCGTCAGCGTCGAGCGCGGGGTGATGACTTCGGTCTCGGAGTCTGGGCAGAGCTTAGCCTGAAGAAGAAGCCAGTGGTCTGGGATGTCGAAGGGCGCTGGCCAGGGGGGCATGATAAGGATCTAGCCTTGGGATCAACGCCTGGAACACAAGAAATCAATACGGCTGACACTCCATCTGCAGAACATCGGAGAAGTGCCGACTTTAACCCTGACGACCATATTATCCCATGGGTTGGTTTGCCTTCCTTTGACCGCGAACCCCACTCGGATGAAATGAAACAATCATGCAATCGTCTTTATAAAGCTGCTGTAAAAGGTGACTGGATAATGGCAAAACAAATCATAGACGAAGATGAGACCAACAGCATATTAGGTCTGAATATTACATATGGAAAGTACACCACACTTCATGTTGCAGCCGGAGCGCCACATGTTCACTTTGTGAATCAATTGCTGGAAATGATGGCCACGCGGCCAGAATACCGAAAATATCTCTTGCGACTAAAAGATGGAAGAGGTAATACTGCCTTCTGTTTAGCTGCGGCTGCTGGATCTATAGAAATTATTAAAACTATGATGGCACATGATCCAAGCCTGCAAGGAAGATTGGGTGGGGAAGGAAAGACGCCACTCTACATGGCTACTTTGTTTGGACATGAGCAAATGGCCTCGTACCTGTATGGGCTGTATGTTGAACCGGTACCTCGAGGAGAAGATCTGCTTGGGGTATTTTTCAGTTGCATAAATACTGGTCTCTATGGTCTAGCCGCTGAAGTGTTGAGACAACATCCCAGTTTTGCTTTAAAACGCGATGCTGAACACTCAAAGACAGCTTTACATTTGCTGGCTGAAAAGCCTTCAGCGTTCACCTGTAGACCTGCTTCAGAAATATGTATGAGGCTCGAACGACGTGGCTGTCCAGCCCATGCATTAGTCAAGGCTCTTTGGCGCAGCGTAACAAGAAACGAGGAATTCGCAGAACTAGTAAAAACTCCTACGCACCTATTGTTTGACGCATTAAAATCAGGAAATTCAGAATTTGTAACAACGCTTGTTCATTACTATCCTGCTTTATTATGGGAAAAGGATAGCGAAAATCATACCATAATACATGCCGCAGTTTCACTTCGCCAAGCGAATGTCTGCAAGTTAATACACGAGATAGGCCTGATCAAGAACGTCATCCTTGCCCTCAAAGATGACAGAAAAAATACTATGCTCCATTTAGCTGCAAGATTAGCTCCCAAAAGCCAATTAAATAAATGGTCTGGAGCAGCTTTGCGAATGCAGCACGAATTAAAATGGTTCGAGGACGTGAAAAGGATTTTGCCGCCTTCATACATAGACATGAAAAACTCAGACGACCAAACAGCTCAAGAAGTATTCTCTTCTGCACATGCAGAGTTATTAAAAGAGGCAGAAAAATGGATGAATGACGCAGCAAAATCATGTATGGTCGTGTCAAGTCTTCTTGTCGGTGCTTTGTTTACGACGGGAATTACTGTGGCGCTGGGAGGGAATAACAGTAGTGATCATCATTTGAAAAGGGTCTCGTATCAATTTTTCATCATATCAGATGCGGTTGCACTCTTCATGGGCTTGATTGCAACATTAATGTTCTTTTACATTCTCACCTCACGTTACGCGGAAAAAGATTTTCTAGAAGACTTACCCTCAAAGTTGCTCAAGGGACTCATATTTCTCTTCATTTCCATCATAGCCCTGATGACGACATTCAGCACTGTGTTCTTCATTGCTTTTGGTGTCAAGAACGCACTCCCTTATCTTGTACTCCTCTCTGCAGGCGGGGCATTGGTCGTCTTTTTTAAGCTGCTGCTTCCATTTGGTCAGGAGATACGTGCTTCCACCACTTCCAAGTCTTTATTTGAACCAAGTCACAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

654

Amino Acids

72.84

Weight (kDa)

8.42

Isoelectric Point (pI)

39.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 156 - 247 1.3e-08 Ankyrin repeats (3 copies)
PGG PF13962 494 - 604 9.5e-13 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 360
AasI GACNNNNNNGTC 1 cut(s) 975
AbsI CCTCGAGG 1 cut(s) 765
Acc36I ACCTGC 1 cut(s) 946
Acc65I GGTACC 1 cut(s) 760
AccB1I GGYRCC 1 cut(s) 760
AccB7I CCANNNNNTGG 1 cut(s) 293
AccI GTMKAC 1 cut(s) 934
AccII CGCG 5 cut(s) 76, 315, 532, 870, 1706
AclWI GGATC 4 cut(s) 186, 199, 619, 641
AcoI YGGCCR 3 cut(s) 158, 525, 533
AcsI RAATTY 3 cut(s) 1031, 1090, 1097
AcuI CTGAAG 4 cut(s) 140, 852, 903, 927
AcyI GRCGYC 1 cut(s) 686
AdeI CACNNNGTG 1 cut(s) 502
AfaI GTAC 4 cut(s) 458, 734, 762, 1851
AfiI CCNNNNNNNGG 1 cut(s) 293
AflIII ACRYGT 1 cut(s) 490
AgeI ACCGGT 1 cut(s) 757
AgsI TTSAA 4 cut(s) 31, 755, 1603, 1949
AhlI ACTAGT 1 cut(s) 1042
AjiI CACGTC 2 cut(s) 971, 1375
AjnI CCWGG 2 cut(s) 160, 199
AjuI GAANNNNNNNTTGG 2 cut(s) 765, 797
AluBI AGCT 9 cut(s) 112, 365, 599, 893, 1289, 1301, 1337, 1433, 1891
AluI AGCT 9 cut(s) 112, 365, 599, 893, 1289, 1301, 1337, 1433, 1891
Alw26I GTCTC 6 cut(s) 59, 98, 410, 818, 835, 1615
AlwI GGATC 4 cut(s) 186, 199, 619, 641
Ama87I CYCGRG 1 cut(s) 765
AoxI GGCC 5 cut(s) 158, 525, 533, 726, 1225
ApoI RAATTY 3 cut(s) 1031, 1090, 1097
AseI ATTAAT 1 cut(s) 1673
AsiGI ACCGGT 1 cut(s) 757
Asp718I GGTACC 1 cut(s) 760
AspLEI GCGC 5 cut(s) 76, 156, 487, 1011, 1570
AsuHPI GGTGA 5 cut(s) 52, 92, 389, 919, 1684
AvaI CYCGRG 1 cut(s) 765
BalI TGGCCA 2 cut(s) 160, 527
BanI GGYRCC 1 cut(s) 760
BarI GAAGNNNNNNTAC 4 cut(s) 565, 597, 925, 957
BauI CACGAG 1 cut(s) 1217
BbsI GAAGAC 2 cut(s) 1520, 1731
BccI CCATC 6 cut(s) 37, 241, 517, 563, 631, 1781
BceAI ACGGC 1 cut(s) 237
BciT130I CCWGG 2 cut(s) 162, 201
BclI TGATCA 2 cut(s) 1230, 1591
BcoDI GTCTC 6 cut(s) 59, 98, 410, 818, 835, 1615
BcuI ACTAGT 1 cut(s) 1042
BfaI CTAG 4 cut(s) 182, 824, 1043, 1721
BfmI CTRYAG 4 cut(s) 237, 615, 931, 1860
BfoI RGCGCY 3 cut(s) 157, 488, 1571
BfuAI ACCTGC 1 cut(s) 946
BglI GCCNNNNNGGC 1 cut(s) 166
BglII AGATCT 1 cut(s) 775
BlpI GCTNAGC 1 cut(s) 113
Bme1390I CCNGG 2 cut(s) 162, 201
BmeT110I CYCGRG 1 cut(s) 765
BmgBI CACGTC 2 cut(s) 971, 1375
BmiI GGNNCC 1 cut(s) 762
BmrFI CCNGG 2 cut(s) 162, 201
BmrI ACTGGG 1 cut(s) 846
BmsI GCATC 2 cut(s) 862, 1627
BmuI ACTGGG 1 cut(s) 846
BoxI GACNNNNGTC 1 cut(s) 90
BpiI GAAGAC 2 cut(s) 1520, 1731
BpmI CTGGAG 1 cut(s) 1350
Bpu1102I GCTNAGC 1 cut(s) 113
BpuEI CTTGAG 2 cut(s) 1419, 1730
BsaAI YACGTR 1 cut(s) 1919
BsaBI GATNNNNATC 1 cut(s) 177
BsaHI GRCGYC 1 cut(s) 686
BsaI GGTCTC 5 cut(s) 59, 98, 410, 818, 1615
BsaJI CCNNGG 3 cut(s) 161, 186, 287
BsaWI WCCGGW 1 cut(s) 757
Bsc4I CCNNNNNNNGG 1 cut(s) 293
Bse118I RCCGGY 1 cut(s) 757
Bse1I ACTGG 4 cut(s) 131, 386, 814, 852
Bse3DI GCAATG 1 cut(s) 1812
Bse8I GATNNNNATC 1 cut(s) 177
BseBI CCWGG 2 cut(s) 162, 201
BseDI CCNNGG 3 cut(s) 161, 186, 287
BseGI GGATG 5 cut(s) 148, 334, 847, 1242, 1494
BseJI GATNNNNATC 1 cut(s) 177
BseLI CCNNNNNNNGG 1 cut(s) 293
BseMI GCAATG 1 cut(s) 1812
BseMII CTCAG 1 cut(s) 1431
BseNI ACTGG 4 cut(s) 131, 386, 814, 852
BseRI GAGGAG 2 cut(s) 783, 1844
BseYI CCCAGC 1 cut(s) 1570
BsgI GTGCAG 1 cut(s) 1437
Bsh1236I CGCG 5 cut(s) 76, 315, 532, 870, 1706
Bsh1285I CGRYCG 2 cut(s) 24, 61
BshFI GGCC 5 cut(s) 160, 527, 535, 728, 1227
BshNI GGYRCC 1 cut(s) 760
BshTI ACCGGT 1 cut(s) 757
BsiEI CGRYCG 2 cut(s) 24, 61
BsiHKCI CYCGRG 1 cut(s) 765
BsiSI CCGG 2 cut(s) 480, 758
BslFI GGGAC 1 cut(s) 1764
BslI CCNNNNNNNGG 1 cut(s) 293
BsmAI GTCTC 6 cut(s) 59, 98, 410, 818, 835, 1615
BsmFI GGGAC 1 cut(s) 1764
BsmI GAATGC 1 cut(s) 1350
BsnI GGCC 5 cut(s) 160, 527, 535, 728, 1227
Bso31I GGTCTC 5 cut(s) 59, 98, 410, 818, 1615
BsoBI CYCGRG 1 cut(s) 765
Bsp143I GATC 8 cut(s) 21, 178, 191, 611, 646, 775, 1230, 1591
Bsp1720I GCTNAGC 1 cut(s) 113
Bsp19I CCATGG 1 cut(s) 287
BspANI GGCC 5 cut(s) 160, 527, 535, 728, 1227
BspCNI CTCAG 1 cut(s) 1430
BspFNI CGCG 5 cut(s) 76, 315, 532, 870, 1706
BspLI GGNNCC 1 cut(s) 762
BspMAI CTGCAG 2 cut(s) 241, 1864
BspMI ACCTGC 1 cut(s) 946
BspPI GGATC 4 cut(s) 186, 199, 619, 641
BspT107I GGYRCC 1 cut(s) 760
BspTNI GGTCTC 5 cut(s) 59, 98, 410, 818, 1615
BsrDI GCAATG 1 cut(s) 1812
BsrFI RCCGGY 1 cut(s) 757
BsrI ACTGG 4 cut(s) 131, 386, 814, 852
BssAI RCCGGY 1 cut(s) 757
BssECI CCNNGG 3 cut(s) 161, 186, 287
BssMI GATC 8 cut(s) 21, 178, 191, 611, 646, 775, 1230, 1591
BssNI GRCGYC 1 cut(s) 686
BssSI CACGAG 1 cut(s) 1217
BssT1I CCWWGG 2 cut(s) 186, 287
Bst2BI CACGAG 1 cut(s) 1217
Bst2UI CCWGG 2 cut(s) 162, 201
Bst4CI ACNGT 3 cut(s) 1564, 1586, 1804
Bst6I CTCTTC 4 cut(s) 568, 1453, 1655, 1769
BstACI GRCGYC 1 cut(s) 686
BstBAI YACGTR 1 cut(s) 1919
BstC8I GCNNGC 4 cut(s) 158, 656, 906, 1864
BstDEI CTNAG 2 cut(s) 113, 1417
BstDSI CCRYGG 1 cut(s) 287
BstF5I GGATG 5 cut(s) 148, 334, 847, 1242, 1494
BstFNI CGCG 5 cut(s) 76, 315, 532, 870, 1706
BstH2I RGCGCY 3 cut(s) 157, 488, 1571
BstHHI GCGC 5 cut(s) 76, 156, 487, 1011, 1570
BstKTI GATC 8 cut(s) 24, 181, 194, 614, 649, 778, 1233, 1594
BstMAI GTCTC 6 cut(s) 59, 98, 410, 818, 835, 1615
BstMBI GATC 8 cut(s) 21, 178, 191, 611, 646, 775, 1230, 1591
BstMCI CGRYCG 2 cut(s) 24, 61
BstMWI GCNNNNNNNGC 7 cut(s) 73, 166, 482, 605, 1298, 1348, 1868
BstNI CCWGG 2 cut(s) 162, 201
BstNSI RCATGY 3 cut(s) 494, 1175, 1460
BstPAI GACNNNNGTC 1 cut(s) 90
BstSCI CCNGG 2 cut(s) 160, 199
BstSFI CTRYAG 4 cut(s) 237, 615, 931, 1860
BstUI CGCG 5 cut(s) 76, 315, 532, 870, 1706
BstV2I GAAGAC 2 cut(s) 1520, 1731
BstX2I RGATCY 3 cut(s) 178, 611, 775
BstXI CCANNNNNNTGG 1 cut(s) 138
BstYI RGATCY 3 cut(s) 178, 611, 775
BsuRI GGCC 5 cut(s) 160, 527, 535, 728, 1227
BtgI CCRYGG 1 cut(s) 287
BtgZI GCGATG 1 cut(s) 885
BtrI CACGTC 2 cut(s) 971, 1375
BtsCI GGATG 5 cut(s) 148, 334, 847, 1242, 1494
BtsIMutI CAGTG 2 cut(s) 138, 1800
BveI ACCTGC 1 cut(s) 946
Cac8I GCNNGC 4 cut(s) 158, 656, 906, 1864
CfoI GCGC 5 cut(s) 76, 156, 487, 1011, 1570
Cfr10I RCCGGY 1 cut(s) 757
CseI GACGC 4 cut(s) 56, 694, 1082, 1505
Csp6I GTAC 4 cut(s) 457, 733, 761, 1850
CspAI ACCGGT 1 cut(s) 757
CviQI GTAC 4 cut(s) 457, 733, 761, 1850
DdeI CTNAG 2 cut(s) 113, 1417
DpnI GATC 8 cut(s) 23, 180, 193, 613, 648, 777, 1232, 1593
DpnII GATC 8 cut(s) 21, 178, 191, 611, 646, 775, 1230, 1591
DraI TTTAAA 1 cut(s) 864
DraIII CACNNNGTG 1 cut(s) 502
DrdI GACNNNNNNGTC 1 cut(s) 975
DseDI GACNNNNNNGTC 1 cut(s) 975
EaeI YGGCCR 3 cut(s) 158, 525, 533
Eam1104I CTCTTC 4 cut(s) 568, 1453, 1655, 1769
EarI CTCTTC 4 cut(s) 568, 1453, 1655, 1769
Eco130I CCWWGG 2 cut(s) 186, 287
Eco147I AGGCCT 1 cut(s) 1227
Eco31I GGTCTC 5 cut(s) 59, 98, 410, 818, 1615
Eco57I CTGAAG 4 cut(s) 140, 852, 903, 927
Eco88I CYCGRG 1 cut(s) 765
EcoRI GAATTC 1 cut(s) 1031
EcoRII CCWGG 2 cut(s) 160, 199
EcoT14I CCWWGG 2 cut(s) 186, 287
EcoT22I ATGCAT 1 cut(s) 991
ErhI CCWWGG 2 cut(s) 186, 287
FalI AAGNNNNNCTT 2 cut(s) 765, 797
FaqI GGGAC 1 cut(s) 1764
FauI CCCGC 2 cut(s) 69, 1859
FauNDI CATATG 1 cut(s) 448
FbaI TGATCA 2 cut(s) 1230, 1591
FblI GTMKAC 1 cut(s) 934
FokI GGATG 5 cut(s) 155, 341, 834, 1229, 1501
FspBI CTAG 4 cut(s) 182, 824, 1043, 1721
GlaI GCGC 5 cut(s) 75, 155, 486, 1010, 1569
GsaI CCCAGC 1 cut(s) 1574
GsuI CTGGAG 1 cut(s) 1350
HaeII RGCGCY 3 cut(s) 157, 488, 1571
HaeIII GGCC 5 cut(s) 160, 527, 535, 728, 1227
HapII CCGG 2 cut(s) 480, 758
HgaI GACGC 4 cut(s) 56, 694, 1082, 1505
HhaI GCGC 5 cut(s) 76, 156, 487, 1011, 1570
Hin1I GRCGYC 1 cut(s) 686
Hin6I GCGC 5 cut(s) 74, 154, 485, 1009, 1568
HinP1I GCGC 5 cut(s) 74, 154, 485, 1009, 1568
HinfI GANTC 3 cut(s) 99, 505, 1752
HpaII CCGG 2 cut(s) 480, 758
HphI GGTGA 5 cut(s) 52, 92, 389, 919, 1684
Hpy166II GTNNAC 5 cut(s) 459, 496, 927, 935, 1548
Hpy188I TCNGA 9 cut(s) 26, 98, 249, 328, 438, 946, 1096, 1420, 1636
Hpy188III TCNNGA 7 cut(s) 1086, 1234, 1329, 1436, 1721, 1828, 1910
Hpy8I GTNNAC 5 cut(s) 459, 496, 927, 935, 1548
Hpy99I CGWCG 4 cut(s) 16, 72, 972, 1555
HpyAV CCTTC 6 cut(s) 143, 312, 598, 671, 927, 1404
HpyCH4III ACNGT 3 cut(s) 1564, 1586, 1804
HpyCH4IV ACGT 5 cut(s) 970, 1239, 1374, 1699, 1918
HpyF10VI GCNNNNNNNGC 7 cut(s) 73, 166, 482, 605, 1298, 1348, 1868
HpyF3I CTNAG 2 cut(s) 113, 1417
HpySE526I ACGT 5 cut(s) 970, 1239, 1374, 1699, 1918
Hsp92I GRCGYC 1 cut(s) 686
HspAI GCGC 5 cut(s) 74, 154, 485, 1009, 1568
KpnI GGTACC 1 cut(s) 764
Ksp22I TGATCA 2 cut(s) 1230, 1591
Kzo9I GATC 8 cut(s) 21, 178, 191, 611, 646, 775, 1230, 1591
LmnI GCTCC 4 cut(s) 482, 1284, 1306, 1331
LweI GCATC 2 cut(s) 862, 1627
MaeI CTAG 4 cut(s) 182, 824, 1043, 1721
MaeII ACGT 5 cut(s) 970, 1239, 1374, 1699, 1918
MaeIII GTNAC 5 cut(s) 377, 1015, 1102, 1700, 1955
MalI GATC 8 cut(s) 23, 180, 193, 613, 648, 777, 1232, 1593
MboI GATC 8 cut(s) 21, 178, 191, 611, 646, 775, 1230, 1591
MfeI CAATTG 1 cut(s) 509
MflI RGATCY 3 cut(s) 178, 611, 775
MlsI TGGCCA 2 cut(s) 160, 527
MluNI TGGCCA 2 cut(s) 160, 527
MlyI GAGTC 2 cut(s) 108, 1746
Mox20I TGGCCA 2 cut(s) 160, 527
Mph1103I ATGCAT 1 cut(s) 991
MscI TGGCCA 2 cut(s) 160, 527
MslI CAYNNNNRTG 2 cut(s) 327, 1406
Msp20I TGGCCA 2 cut(s) 160, 527
MspA1I CMGCKG 1 cut(s) 830
MspI CCGG 2 cut(s) 480, 758
MspR9I CCNGG 2 cut(s) 162, 201
MunI CAATTG 1 cut(s) 509
Mva1269I GAATGC 1 cut(s) 1350
MvaI CCWGG 2 cut(s) 162, 201
MvnI CGCG 5 cut(s) 76, 315, 532, 870, 1706
MwoI GCNNNNNNNGC 7 cut(s) 73, 166, 482, 605, 1298, 1348, 1868
NcoI CCATGG 1 cut(s) 287
NdeI CATATG 1 cut(s) 448
NdeII GATC 8 cut(s) 21, 178, 191, 611, 646, 775, 1230, 1591
NlaIV GGNNCC 1 cut(s) 762
NmuCI GTSAC 2 cut(s) 377, 1955
NsiI ATGCAT 1 cut(s) 991
NspI RCATGY 3 cut(s) 494, 1175, 1460
PaeR7I CTCGAG 1 cut(s) 765
PceI AGGCCT 1 cut(s) 1227
PciI ACATGT 1 cut(s) 490
PcsI WCGNNNNNNNCGW 2 cut(s) 11, 67
PctI GAATGC 1 cut(s) 1350
PfeI GAWTC 1 cut(s) 505
PflMI CCANNNNNTGG 1 cut(s) 293
PinAI ACCGGT 1 cut(s) 757
Ple19I CGATCG 1 cut(s) 24
PleI GAGTC 2 cut(s) 107, 1746
PpsI GAGTC 2 cut(s) 107, 1746
Ppu21I YACGTR 1 cut(s) 1919
PscI ACATGT 1 cut(s) 490
PshAI GACNNNNGTC 1 cut(s) 90
PshBI ATTAAT 1 cut(s) 1673
PsiI TTATAA 1 cut(s) 360
Psp6I CCWGG 2 cut(s) 160, 199
PspFI CCCAGC 1 cut(s) 1570
PspGI CCWGG 2 cut(s) 160, 199
PspN4I GGNNCC 1 cut(s) 762
PspXI VCTCGAGB 1 cut(s) 765
PstI CTGCAG 2 cut(s) 241, 1864
PsuI RGATCY 3 cut(s) 178, 611, 775
PvuI CGATCG 1 cut(s) 24
RsaI GTAC 4 cut(s) 458, 734, 762, 1851
RsaNI GTAC 4 cut(s) 457, 733, 761, 1850
RseI CAYNNNNRTG 2 cut(s) 327, 1406
Sau3AI GATC 8 cut(s) 21, 178, 191, 611, 646, 775, 1230, 1591
SchI GAGTC 2 cut(s) 108, 1746
ScrFI CCNGG 2 cut(s) 162, 201
SfaNI GCATC 2 cut(s) 862, 1627
SfcI CTRYAG 4 cut(s) 237, 615, 931, 1860
Sfr274I CTCGAG 1 cut(s) 765
SlaI CTCGAG 1 cut(s) 765
SmiMI CAYNNNNRTG 2 cut(s) 327, 1406
SmlI CTYRAG 3 cut(s) 765, 1434, 1745
SmoI CTYRAG 3 cut(s) 765, 1434, 1745
SpeI ACTAGT 1 cut(s) 1042
SseBI AGGCCT 1 cut(s) 1227
SspI AATATT 1 cut(s) 442
SspMI CTAG 4 cut(s) 182, 824, 1043, 1721
StuI AGGCCT 1 cut(s) 1227
StyD4I CCNGG 2 cut(s) 160, 199
StyI CCWWGG 2 cut(s) 186, 287
TaaI ACNGT 3 cut(s) 1564, 1586, 1804
TaiI ACGT 5 cut(s) 973, 1242, 1377, 1702, 1921
TaqI TCGA 5 cut(s) 70, 147, 766, 963, 1368
TaqII GACCGA 2 cut(s) 47, 80
TatI WGTACW 2 cut(s) 456, 1849
TauI GCSGC 6 cut(s) 11, 535, 605, 830, 1178, 1393
TfiI GAWTC 1 cut(s) 505
TscAI CASTG 2 cut(s) 138, 1807
TseFI GTSAC 2 cut(s) 377, 1955
Tsp45I GTSAC 2 cut(s) 377, 1955
TspRI CASTG 2 cut(s) 138, 1807
Van91I CCANNNNNTGG 1 cut(s) 293
VspI ATTAAT 1 cut(s) 1673
XapI RAATTY 3 cut(s) 1031, 1090, 1097
XbaI TCTAGA 1 cut(s) 1720
XceI RCATGY 3 cut(s) 494, 1175, 1460
XhoI CTCGAG 1 cut(s) 765
XmiI GTMKAC 1 cut(s) 934
XspI CTAG 4 cut(s) 182, 824, 1043, 1721
Zsp2I ATGCAT 1 cut(s) 991
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.