Rmu_sc0005539.1_g000032

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005539.1
OG0000157
Physical Location & Seq
Forward (+)
121561 .. 131750
10190 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005539.1_g000032.1.cds

Sequence Viewer

Length: 2322 bp
atggctcctcccagtcttctcggtcctcccgagctccacaaaccctcacccaccaccaccgctccgccgccacccgaacccgaatccaaaccccaaggcctggaactggaaagtctgacaaggaaggcttccatatggcggcgttttggctccacaagcaccaccccaaaactcgcttgcaacctcgcgtccttctccgagttcggttacttcaaggacctgccggagattgtgtaccggcttctggagagcgaggacgtgaggaagaaacagaaggcggagtggcgggagaggaaatgcaccggaggcaggaagcgacgggaatccgaatccgacggcggaaccgggtcgagctccgagaagaagaaagagaggaaaatggagagagaagaagacgattcagtgagcgaggttctcagagatcgattcagactctccaccatctctatcgccgatgccgaaggtactaaaatcttcacactcactaattcgacggcttttgatttcgtttctggttttttttcttctcagttttcaattctagttctccaagcagcgaatagaagcggcatggagatatcggaatccgtggtggcttgcatttctgacttggccttcaaatttactggtattttacttaagctttgctggccccgtgataccgtacttgaaatccctccgcctccttgcaagccagcttccctccacttacttgcagatccgcataagtacctcacacgatgtgttcccctatgcaacgctgcaacacaagttaactggtcagcgactaagaaaatcatgctgcatgaggatgactcgattaaaggtgccgctattacaaaaggaagccaatatactgttcttcatattgcggcctctataggacattccggctatatgaagaagttgctgacgttgttagaaaatgatcacttatacatgctggatcagaaggggaatgcagcattttgtttggttgtcgcagcgggaaaggtatgcatggccaagagcatgctaagaaaagatcccctcatggcaggactgaagtgtgctgaaggatggtcacagcttcgtttagccacttatcatggtcatggcaagatggcatggtttctgtaccctaaaattatcgaaggccttgaacaaggggaacgagttgcaacatttttcaattgcatcaacagcactgacactgctttgtctgaactagcattgaaaatgcttcttgagtacccggagcttgcagaggctcgtgccaatggtgcaacagcattccatgtgttggctgggaagccttcagcatttagatcagcaccgttgaaacgcttcctttactctggtttaggaaagcagctcaaaactcctgcccttcaaatactaaaagaactttggaatatagtctcaaagaaagatgagacgacggttaaaggaatcttaacaatgactttaaatggaaagccttcaaatgcattgttcattgcagctgaatgtggaaatgttgagttcctggctgagctttttgtctctgatcctgctttgaaatttgaaaaagatgactgcaatcggaatgtattccacattggagctatgtctcatcagtggagcatcttcagtctggcagataagttgggtcctgatgagaaatattccatactctctgcagtagataatgagggcaacaccatactgcatttagcagcaaaggtagctaaactaaaatgggatgagatggtcggacctgaagttcaaatgaaacgagatctcaaggggtttaaggaggtgagaaaggttgtgccacctggctgcccagatatgaggaacttggaaggtaaaacgcctggagatatattcagcgagcagcatggagctttaaatgatctcttggtaaataaaaaggagatgtcatggacgaccttggtgacaataatcgcaagttactttgggattgggggagcctcattcggcgctgcaacgtttgtgttgcaacagaaccggatcgccgaagtcggactccagtcaccccgaaacccaacaaggcttcaaagcctccgctgccgtcgaatccgcctggtatccaccccatcagcgcaacgcttcatcaagtcggaaccagaagagttcctgccaccccttctgtccatgcctagatatctcgtcaggagccaccaaacacccctagaaaactccctgccccgctgcactcacctcacactgacgaggccagaggcctggcacggcgcaggagccgccggacgagaacaaaagaaaggcaacgaaaccctagtcgcacgcgggaagcagagaacgcttgaatatgaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

773

Amino Acids

85.73

Weight (kDa)

9.05

Isoelectric Point (pI)

42.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 228
AccB1I GGYRCC 1 cut(s) 827
AccB7I CCANNNNNTGG 2 cut(s) 100, 1282
AccBSI CCGCTC 1 cut(s) 62
AccII CGCG 2 cut(s) 188, 2292
AclI AACGTT 1 cut(s) 1973
AclWI GGATC 5 cut(s) 713, 954, 1019, 1523, 2003
AcoI YGGCCR 1 cut(s) 1002
AcsI RAATTY 2 cut(s) 620, 1541
AcuI CTGAAG 5 cut(s) 1064, 1074, 1281, 1594, 1761
AdeI CACNNNGTG 1 cut(s) 743
AfaI GTAC 6 cut(s) 236, 466, 666, 731, 1118, 1232
AfiI CCNNNNNNNGG 6 cut(s) 100, 106, 138, 244, 309, 1282
AflII CTTAAG 1 cut(s) 638
AjiI CACGTC 1 cut(s) 259
AjnI CCWGG 6 cut(s) 99, 1506, 1798, 1837, 2067, 2228
AjuI GAANNNNNNNTTGG 2 cut(s) 843, 875
AloI GAACNNNNNNTCC 2 cut(s) 1728, 1760
Alw21I GWGCWC 2 cut(s) 36, 356
Alw26I GTCTC 4 cut(s) 1405, 1409, 1528, 1596
AlwI GGATC 5 cut(s) 713, 954, 1019, 1523, 2003
Ama87I CYCGRG 1 cut(s) 29
AoxI GGCC 8 cut(s) 97, 612, 650, 873, 1002, 1135, 2219, 2226
ApoI RAATTY 2 cut(s) 620, 1541
ArsI GACNNNNNNTTYG 2 cut(s) 2268, 2300
Asp700I GAANNNNTTC 3 cut(s) 1325, 1459, 1571
AspLEI GCGC 3 cut(s) 1967, 2089, 2240
AspS9I GGNCC 5 cut(s) 23, 217, 651, 1631, 1736
AsuC2I CCSGG 2 cut(s) 346, 1235
AsuHPI GGTGA 5 cut(s) 39, 1792, 1930, 2010, 2195
AvaI CYCGRG 1 cut(s) 29
AvaII GGWCC 4 cut(s) 23, 217, 1631, 1736
BalI TGGCCA 1 cut(s) 1004
BanI GGYRCC 1 cut(s) 827
BanII GRGCYC 2 cut(s) 36, 356
BarI GAAGNNNNNNTAC 2 cut(s) 838, 870
BauI CACGAG 1 cut(s) 1251
BbsI GAAGAC 2 cut(s) 8, 399
Bbv12I GWGCWC 2 cut(s) 36, 356
BccI CCATC 5 cut(s) 449, 1053, 1096, 1723, 2089
BceAI ACGGC 4 cut(s) 352, 510, 2040, 2251
BciT130I CCWGG 6 cut(s) 101, 1508, 1800, 1839, 2069, 2230
BciVI GTATCC 1 cut(s) 2083
BclI TGATCA 1 cut(s) 928
BcnI CCSGG 2 cut(s) 346, 1235
BcoDI GTCTC 4 cut(s) 1405, 1409, 1528, 1596
BfaI CTAG 5 cut(s) 542, 1208, 2145, 2177, 2282
BfmI CTRYAG 2 cut(s) 879, 1659
BfoI RGCGCY 1 cut(s) 1968
BfrI CTTAAG 1 cut(s) 638
BfuAI ACCTGC 1 cut(s) 228
BfuI GTATCC 1 cut(s) 2083
BglII AGATCT 1 cut(s) 1759
BlpI GCTNAGC 1 cut(s) 1512
Bme1390I CCNGG 8 cut(s) 101, 346, 1235, 1508, 1800, 1839, 2069, 2230
Bme18I GGWCC 4 cut(s) 23, 217, 1631, 1736
BmeT110I CYCGRG 1 cut(s) 29
BmgBI CACGTC 1 cut(s) 259
BmgT120I GGNCC 5 cut(s) 23, 217, 651, 1631, 1736
BmrFI CCNGG 8 cut(s) 101, 346, 1235, 1508, 1800, 1839, 2069, 2230
BmrI ACTGGG 1 cut(s) 6
BmsI GCATC 3 cut(s) 445, 1185, 1614
BmuI ACTGGG 1 cut(s) 6
BoxI GACNNNNGTC 1 cut(s) 2014
BpiI GAAGAC 2 cut(s) 8, 399
BplI GAGNNNNNCTC 2 cut(s) 800, 832
BpmI CTGGAG 3 cut(s) 266, 1860, 1997
Bpu1102I GCTNAGC 1 cut(s) 1512
BpuEI CTTGAG 2 cut(s) 1247, 1748
BpuMI CCSGG 2 cut(s) 346, 1235
Bsa29I ATCGAT 1 cut(s) 424
BsaJI CCNNGG 3 cut(s) 94, 588, 1914
BsaWI WCCGGW 2 cut(s) 302, 1992
BsaXI ACNNNNNCTCC 4 cut(s) 46, 76, 218, 248
Bsc4I CCNNNNNNNGG 6 cut(s) 100, 106, 138, 244, 309, 1282
Bse118I RCCGGY 1 cut(s) 237
Bse1I ACTGG 5 cut(s) 12, 111, 631, 782, 2014
Bse3DI GCAATG 1 cut(s) 1476
BseBI CCWGG 6 cut(s) 101, 1508, 1800, 1839, 2069, 2230
BseCI ATCGAT 1 cut(s) 424
BseDI CCNNGG 3 cut(s) 94, 588, 1914
BseGI GGATG 3 cut(s) 817, 1064, 1729
BseLI CCNNNNNNNGG 6 cut(s) 100, 106, 138, 244, 309, 1282
BseMI GCAATG 1 cut(s) 1476
BseMII CTCAG 3 cut(s) 430, 542, 1503
BseNI ACTGG 5 cut(s) 12, 111, 631, 782, 2014
BseYI CCCAGC 1 cut(s) 1286
BsgI GTGCAG 1 cut(s) 2182
Bsh1236I CGCG 2 cut(s) 188, 2292
BshFI GGCC 8 cut(s) 99, 614, 652, 875, 1004, 1137, 2221, 2228
BshNI GGYRCC 1 cut(s) 827
BshVI ATCGAT 1 cut(s) 424
BsiHKAI GWGCWC 2 cut(s) 36, 356
BsiHKCI CYCGRG 1 cut(s) 29
BsiSI CCGG 8 cut(s) 224, 238, 303, 345, 891, 1235, 1993, 2250
BslI CCNNNNNNNGG 6 cut(s) 100, 106, 138, 244, 309, 1282
BsmAI GTCTC 4 cut(s) 1405, 1409, 1528, 1596
BsmBI CGTCTC 1 cut(s) 1409
BsmI GAATGC 2 cut(s) 964, 1271
BsnI GGCC 8 cut(s) 99, 614, 652, 875, 1004, 1137, 2221, 2228
BsoBI CYCGRG 1 cut(s) 29
Bsp1286I GDGCHC 2 cut(s) 36, 356
Bsp1720I GCTNAGC 1 cut(s) 1512
BspANI GGCC 8 cut(s) 99, 614, 652, 875, 1004, 1137, 2221, 2228
BspCNI CTCAG 3 cut(s) 429, 541, 1504
BspDI ATCGAT 1 cut(s) 424
BspFNI CGCG 2 cut(s) 188, 2292
BspMAI CTGCAG 1 cut(s) 1663
BspMI ACCTGC 1 cut(s) 228
BspPI GGATC 5 cut(s) 713, 954, 1019, 1523, 2003
BspT107I GGYRCC 1 cut(s) 827
BspTI CTTAAG 1 cut(s) 638
BsrBI CCGCTC 1 cut(s) 62
BsrDI GCAATG 1 cut(s) 1476
BsrFI RCCGGY 1 cut(s) 237
BsrI ACTGG 5 cut(s) 12, 111, 631, 782, 2014
BssAI RCCGGY 1 cut(s) 237
BssECI CCNNGG 3 cut(s) 94, 588, 1914
BssSI CACGAG 1 cut(s) 1251
BssT1I CCWWGG 2 cut(s) 94, 1914
Bst2BI CACGAG 1 cut(s) 1251
Bst2UI CCWGG 6 cut(s) 101, 1508, 1800, 1839, 2069, 2230
Bst4CI ACNGT 4 cut(s) 664, 859, 1317, 1423
Bst6I CTCTTC 1 cut(s) 2109
BstAFI CTTAAG 1 cut(s) 638
BstC8I GCNNGC 9 cut(s) 178, 598, 650, 692, 696, 1013, 1242, 1856, 2290
BstDEI CTNAG 5 cut(s) 416, 528, 789, 1016, 1512
BstDSI CCRYGG 1 cut(s) 588
BstF5I GGATG 3 cut(s) 817, 1064, 1729
BstFNI CGCG 2 cut(s) 188, 2292
BstH2I RGCGCY 1 cut(s) 1968
BstHHI GCGC 3 cut(s) 1967, 2089, 2240
BstMAI GTCTC 4 cut(s) 1405, 1409, 1528, 1596
BstMWI GCNNNNNNNGC 9 cut(s) 156, 306, 649, 1182, 1262, 1706, 2052, 2246, 2305
BstNI CCWGG 6 cut(s) 101, 1508, 1800, 1839, 2069, 2230
BstNSI RCATGY 2 cut(s) 943, 1015
BstPAI GACNNNNGTC 1 cut(s) 2014
BstSCI CCNGG 8 cut(s) 99, 344, 1233, 1506, 1798, 1837, 2067, 2228
BstSFI CTRYAG 2 cut(s) 879, 1659
BstUI CGCG 2 cut(s) 188, 2292
BstV2I GAAGAC 2 cut(s) 8, 399
BstX2I RGATCY 3 cut(s) 718, 1024, 1759
BstXI CCANNNNNNTGG 1 cut(s) 2229
BstYI RGATCY 3 cut(s) 718, 1024, 1759
Bsu15I ATCGAT 1 cut(s) 424
BsuI GTATCC 1 cut(s) 2083
BsuRI GGCC 8 cut(s) 99, 614, 652, 875, 1004, 1137, 2221, 2228
BsuTUI ATCGAT 1 cut(s) 424
BtgI CCRYGG 1 cut(s) 588
BtrI CACGTC 1 cut(s) 259
BtsCI GGATG 3 cut(s) 817, 1064, 1729
BtsI GCAGTG 1 cut(s) 1191
BtsIMutI CAGTG 5 cut(s) 408, 1185, 1191, 1604, 2210
BveI ACCTGC 1 cut(s) 228
Cac8I GCNNGC 9 cut(s) 178, 598, 650, 692, 696, 1013, 1242, 1856, 2290
CfoI GCGC 3 cut(s) 1967, 2089, 2240
Cfr10I RCCGGY 1 cut(s) 237
Cfr13I GGNCC 5 cut(s) 23, 217, 651, 1631, 1736
ClaI ATCGAT 1 cut(s) 424
CseI GACGC 1 cut(s) 177
Csp6I GTAC 6 cut(s) 235, 465, 665, 730, 1117, 1231
CviQI GTAC 6 cut(s) 235, 465, 665, 730, 1117, 1231
DdeI CTNAG 5 cut(s) 416, 528, 789, 1016, 1512
DraI TTTAAA 2 cut(s) 1449, 1872
DraIII CACNNNGTG 1 cut(s) 743
EaeI YGGCCR 1 cut(s) 1002
Eam1104I CTCTTC 1 cut(s) 2109
EarI CTCTTC 1 cut(s) 2109
EciI GGCGGA 5 cut(s) 54, 293, 354, 669, 2054
Ecl136II GAGCTC 2 cut(s) 34, 354
Eco130I CCWWGG 2 cut(s) 94, 1914
Eco147I AGGCCT 3 cut(s) 99, 1137, 2228
Eco24I GRGCYC 2 cut(s) 36, 356
Eco32I GATATC 2 cut(s) 579, 2150
Eco47I GGWCC 4 cut(s) 23, 217, 1631, 1736
Eco53kI GAGCTC 2 cut(s) 34, 354
Eco57I CTGAAG 5 cut(s) 1064, 1074, 1281, 1594, 1761
Eco88I CYCGRG 1 cut(s) 29
EcoICRI GAGCTC 2 cut(s) 34, 354
EcoO109I RGGNCCY 2 cut(s) 217, 1631
EcoRII CCWGG 6 cut(s) 99, 1506, 1798, 1837, 2067, 2228
EcoRV GATATC 2 cut(s) 579, 2150
EcoT14I CCWWGG 2 cut(s) 94, 1914
EcoT22I ATGCAT 2 cut(s) 1001, 1471
EcoT38I GRGCYC 2 cut(s) 36, 356
ErhI CCWWGG 2 cut(s) 94, 1914
Esp3I CGTCTC 1 cut(s) 1409
FalI AAGNNNNNCTT 2 cut(s) 112, 144
FauI CCCGC 4 cut(s) 279, 979, 2201, 2285
FauNDI CATATG 1 cut(s) 134
FbaI TGATCA 1 cut(s) 928
FokI GGATG 3 cut(s) 824, 1071, 1736
FriOI GRGCYC 2 cut(s) 36, 356
FspBI CTAG 5 cut(s) 542, 1208, 2145, 2177, 2282
GlaI GCGC 3 cut(s) 1966, 2088, 2239
GsaI CCCAGC 1 cut(s) 1290
GsuI CTGGAG 3 cut(s) 266, 1860, 1997
HaeII RGCGCY 1 cut(s) 1968
HaeIII GGCC 8 cut(s) 99, 614, 652, 875, 1004, 1137, 2221, 2228
HapII CCGG 8 cut(s) 224, 238, 303, 345, 891, 1235, 1993, 2250
HgaI GACGC 1 cut(s) 177
HhaI GCGC 3 cut(s) 1967, 2089, 2240
Hin6I GCGC 3 cut(s) 1965, 2087, 2238
HinP1I GCGC 3 cut(s) 1965, 2087, 2238
HincII GTYRAC 1 cut(s) 775
HindII GTYRAC 1 cut(s) 775
HindIII AAGCTT 1 cut(s) 641
HpaI GTTAAC 1 cut(s) 775
HpaII CCGG 8 cut(s) 224, 238, 303, 345, 891, 1235, 1993, 2250
HphI GGTGA 5 cut(s) 39, 1792, 1930, 2010, 2195
Hpy166II GTNNAC 2 cut(s) 235, 775
Hpy188III TCNNGA 5 cut(s) 29, 245, 1226, 1634, 2158
Hpy8I GTNNAC 2 cut(s) 235, 775
Hpy99I CGWCG 5 cut(s) 321, 338, 496, 1423, 2061
HpyCH4III ACNGT 4 cut(s) 664, 859, 1317, 1423
HpyCH4IV ACGT 3 cut(s) 258, 914, 1973
HpyF10VI GCNNNNNNNGC 9 cut(s) 156, 306, 649, 1182, 1262, 1706, 2052, 2246, 2305
HpyF3I CTNAG 5 cut(s) 416, 528, 789, 1016, 1512
HpySE526I ACGT 3 cut(s) 258, 914, 1973
HspAI GCGC 3 cut(s) 1965, 2087, 2238
Ksp22I TGATCA 1 cut(s) 928
KspAI GTTAAC 1 cut(s) 775
LweI GCATC 3 cut(s) 445, 1185, 1614
MaeI CTAG 5 cut(s) 542, 1208, 2145, 2177, 2282
MaeII ACGT 3 cut(s) 258, 914, 1973
MaeIII GTNAC 5 cut(s) 206, 1062, 1918, 1934, 2016
MbiI CCGCTC 1 cut(s) 62
MfeI CAATTG 1 cut(s) 1171
MflI RGATCY 3 cut(s) 718, 1024, 1759
MhlI GDGCHC 2 cut(s) 36, 356
MlsI TGGCCA 1 cut(s) 1004
MluCI AATT 6 cut(s) 487, 537, 620, 1125, 1171, 1541
MluNI TGGCCA 1 cut(s) 1004
MlyI GAGTC 3 cut(s) 426, 809, 2004
MmeI TCCRAC 4 cut(s) 357, 1714, 1987, 2085
Mox20I TGGCCA 1 cut(s) 1004
Mph1103I ATGCAT 2 cut(s) 1001, 1471
MroXI GAANNNNTTC 3 cut(s) 1325, 1459, 1571
MscI TGGCCA 1 cut(s) 1004
MseI TTAA 8 cut(s) 639, 774, 822, 1425, 1436, 1448, 1773, 1871
MslI CAYNNNNRTG 2 cut(s) 810, 1092
Msp20I TGGCCA 1 cut(s) 1004
MspA1I CMGCKG 4 cut(s) 986, 1484, 2052, 2196
MspCI CTTAAG 1 cut(s) 638
MspI CCGG 8 cut(s) 224, 238, 303, 345, 891, 1235, 1993, 2250
MspR9I CCNGG 8 cut(s) 101, 346, 1235, 1508, 1800, 1839, 2069, 2230
MunI CAATTG 1 cut(s) 1171
Mva1269I GAATGC 2 cut(s) 964, 1271
MvaI CCWGG 6 cut(s) 101, 1508, 1800, 1839, 2069, 2230
MvnI CGCG 2 cut(s) 188, 2292
MwoI GCNNNNNNNGC 9 cut(s) 156, 306, 649, 1182, 1262, 1706, 2052, 2246, 2305
NciI CCSGG 2 cut(s) 346, 1235
NdeI CATATG 1 cut(s) 134
NmuCI GTSAC 3 cut(s) 1062, 1918, 2016
NsiI ATGCAT 2 cut(s) 1001, 1471
NspI RCATGY 2 cut(s) 943, 1015
PaeI GCATGC 1 cut(s) 1015
PceI AGGCCT 3 cut(s) 99, 1137, 2228
PcsI WCGNNNNNNNCGW 2 cut(s) 27, 456
PctI GAATGC 2 cut(s) 964, 1271
PdmI GAANNNNTTC 3 cut(s) 1325, 1459, 1571
PfeI GAWTC 8 cut(s) 83, 323, 329, 398, 426, 584, 1431, 2061
PflMI CCANNNNNTGG 2 cut(s) 100, 1282
PleI GAGTC 3 cut(s) 426, 809, 2004
PpsI GAGTC 3 cut(s) 426, 809, 2004
PpuMI RGGWCCY 2 cut(s) 217, 1631
PshAI GACNNNNGTC 1 cut(s) 2014
Psp124BI GAGCTC 2 cut(s) 36, 356
Psp1406I AACGTT 1 cut(s) 1973
Psp5II RGGWCCY 2 cut(s) 217, 1631
Psp6I CCWGG 6 cut(s) 99, 1506, 1798, 1837, 2067, 2228
PspFI CCCAGC 1 cut(s) 1286
PspGI CCWGG 6 cut(s) 99, 1506, 1798, 1837, 2067, 2228
PspPI GGNCC 5 cut(s) 23, 217, 651, 1631, 1736
PspPPI RGGWCCY 2 cut(s) 217, 1631
PstI CTGCAG 1 cut(s) 1663
PsuI RGATCY 3 cut(s) 718, 1024, 1759
PvuII CAGCTG 1 cut(s) 1484
RsaI GTAC 6 cut(s) 236, 466, 666, 731, 1118, 1232
RsaNI GTAC 6 cut(s) 235, 465, 665, 730, 1117, 1231
RseI CAYNNNNRTG 2 cut(s) 810, 1092
SacI GAGCTC 2 cut(s) 36, 356
SaqAI TTAA 8 cut(s) 639, 774, 822, 1425, 1436, 1448, 1773, 1871
Sau96I GGNCC 5 cut(s) 23, 217, 651, 1631, 1736
SchI GAGTC 3 cut(s) 426, 809, 2004
ScrFI CCNGG 8 cut(s) 101, 346, 1235, 1508, 1800, 1839, 2069, 2230
SduI GDGCHC 2 cut(s) 36, 356
SfaNI GCATC 3 cut(s) 445, 1185, 1614
SfcI CTRYAG 2 cut(s) 879, 1659
SinI GGWCC 4 cut(s) 23, 217, 1631, 1736
SmiMI CAYNNNNRTG 2 cut(s) 810, 1092
SmlI CTYRAG 3 cut(s) 638, 1226, 1763
SmoI CTYRAG 3 cut(s) 638, 1226, 1763
SphI GCATGC 1 cut(s) 1015
Sse9I AATT 6 cut(s) 487, 537, 620, 1125, 1171, 1541
SseBI AGGCCT 3 cut(s) 99, 1137, 2228
SspI AATATT 1 cut(s) 1646
SspMI CTAG 5 cut(s) 542, 1208, 2145, 2177, 2282
SstI GAGCTC 2 cut(s) 36, 356
StuI AGGCCT 3 cut(s) 99, 1137, 2228
StyD4I CCNGG 8 cut(s) 99, 344, 1233, 1506, 1798, 1837, 2067, 2228
StyI CCWWGG 2 cut(s) 94, 1914
TaaI ACNGT 4 cut(s) 664, 859, 1317, 1423
TaiI ACGT 3 cut(s) 261, 917, 1976
TaqI TCGA 6 cut(s) 350, 424, 491, 818, 1131, 2059
TaqII GACCGA 1 cut(s) 11
TasI AATT 6 cut(s) 487, 537, 620, 1125, 1171, 1541
TauI GCSGC 6 cut(s) 70, 142, 570, 833, 875, 2249
TfiI GAWTC 8 cut(s) 83, 323, 329, 398, 426, 584, 1431, 2061
Tru1I TTAA 8 cut(s) 639, 774, 822, 1425, 1436, 1448, 1773, 1871
Tru9I TTAA 8 cut(s) 639, 774, 822, 1425, 1436, 1448, 1773, 1871
TscAI CASTG 5 cut(s) 408, 1192, 1198, 1604, 2217
TseFI GTSAC 3 cut(s) 1062, 1918, 2016
Tsp45I GTSAC 3 cut(s) 1062, 1918, 2016
TspDTI ATGAA 5 cut(s) 854, 914, 1465, 1766, 2086
TspGWI ACGGA 1 cut(s) 577
TspRI CASTG 5 cut(s) 408, 1192, 1198, 1604, 2217
Van91I CCANNNNNTGG 2 cut(s) 100, 1282
Vha464I CTTAAG 1 cut(s) 638
VpaK11BI GGWCC 4 cut(s) 23, 217, 1631, 1736
XapI RAATTY 2 cut(s) 620, 1541
XceI RCATGY 2 cut(s) 943, 1015
XcmI CCANNNNNNNNNTGG 1 cut(s) 1283
XmnI GAANNNNTTC 3 cut(s) 1325, 1459, 1571
XspI CTAG 5 cut(s) 542, 1208, 2145, 2177, 2282
Zsp2I ATGCAT 2 cut(s) 1001, 1471
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.