RchiOBHm_Chr5g0045771

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000157
Physical Location & Seq
Forward (+)
41777678 .. 41779748
2071 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ32383

Sequence Viewer

Length: 1770 bp
ATGTATATATTCAACAAATTAATTACAGAACTTGATCAATTGTCCTTTATAAAATCCTACATAGGAGAGCTATACCTTAATACATGTGTGCCACTCTCTAAGTATGCACTAAAAGGCAATTGGGAAGCTGCTGAACGAATCTTGAAGGAGGATCCGAGTCTTTTGACTTCTAGCATAACAAGAGGGGGGGACACTGTCCTTCACATTGCAGCAGGAGCAAGACATGTTCGCTTTGTGGAGAAGCTGGTCGAAATGATGGAAGAACTGAATGGAAACGAGACATGTTCACAAAACTTGGCACTGCAAGACATGAATGGAAACACTGCCTTCATCATTGCTGCTGCAGCTGGAAGTATTGAAATTGCAGAGATTTTGATCAAGAAGAATAAGGATTTGCAAATAATTCGAGGTGGTGAAGGAATGACACCACTCTATATGGCTGCCTTGTTGGGACAGTCTGTAATGGCAGATAACCTGTACTCTAGAACCAAGGAAATGTTGGAGGAAGTCGACCGCCAAGCGTTGTTTTTTACTTGTATCGATAATGGTCTGTACGATCTAGCTTTGAAGATTCTAAGAAGTGACAGAGCATTAGCTAAGGCTTGTAATGCAAAAGAGGAAACAGCTTTGCATATCTTGGCTAGAACGCCTTCAGACTTCACCAGCCAAAGTCCAGGAACGTGGAGTAGACTCATCAACTCATTTATCCCAGATTGGAATTTCTCATACAATAGAAACTTGAAACAAGTCAATGAAGCCCTTCAACTAGTCCAATGCCTTTGGACAGAAATCTTGAGAAATGATCATGACGATGTGATGAGACTAATCAAACATCCTTCAAGATTACTGTTCGACGCTACAAAATTAGGAAATTATGAGTTCCTGGCAGTGCTCATTAACTCTTATCCTGACTTAATATGGCAACTTGATGACAAAAATCGGAGTATAATCCATGTTGCTGTTTTGCATCGTCATGCAAGTATCTTCAATTTAGTGCATGAGATAGGTTCCATCAAGGATATCATAGTGACATTTACTGATGATGAAGAGAGTAATAACATTTTACATATGGCTGCAAAATTAGCACCTCCAAATCAACTCAACCTTGTATCAGGAGCAGCCCTTCAAATGCAGCGAGAGTTGGTATGGTTTGAGGAAGTGAAAAAGATTGTACAACCTAACTCCATAGAGATGAAAAACAAGAAAGGAAAAACACCACGAGAATTGTTCACAAGTGAGCATGAAGGGTTGTTACACAAAGGAGAAGCATGGATGAAGGACACTGCAAGTTCATGCATGATTGTTGCGGCTCTTATCGCAGCTATTGTGTTTTCAGCTGCATTTAGCGTACCTGGTGGTACATCTGATAATACAGGACAGCCAAACTTTCTAAAAGAGACTGCTTTCCTATTCTTTGCCATAGCAGATGGAGTAGCACTCGTTTCCTCTTCAACTTCAATACTGATGTTCTTGTTCATCCTCACATCGCGTTACGCTGAAGGTGATTTCCTCAAATCGTTACCGTTGAAGTTGATGATAGGACTCGCATCACTTTTCATATCTATAGCATCCATGATGGTAGCTTTTAGCGCAACCTTCTATTTAGACTGTCACTATGGATTAGGATGGGTCCCAAATCTTATATTTGTATTTGCATTTGTCCCGGTTGCTTTGTTTGCTTTTCTGCAGTTTCCTCTCTTGTCTGATATGTTTTCTTCAACATATTGTTCAAGTCTTTTATTTCAGCCATGGAAACATATGATCGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

589

Amino Acids

65.98

Weight (kDa)

5.68

Isoelectric Point (pI)

40.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 36 - 133 1.2e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 99 - 160 1.4e-07 Ankyrin repeats (3 copies)
PGG PF13962 423 - 535 1.4e-24 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 50
AccI GTMKAC 2 cut(s) 510, 688
AccII CGCG 1 cut(s) 1489
AciI CCGC 2 cut(s) 514, 1307
AclWI GGATC 2 cut(s) 146, 159
AcsI RAATTY 1 cut(s) 718
AcuI CTGAAG 2 cut(s) 636, 1518
AfaI GTAC 5 cut(s) 479, 554, 1173, 1350, 1360
AflIII ACRYGT 3 cut(s) 83, 223, 281
AhlI ACTAGT 1 cut(s) 766
AjnI CCWGG 3 cut(s) 673, 882, 1351
Alw21I GWGCWC 1 cut(s) 894
Alw26I GTCTC 3 cut(s) 272, 814, 1391
AlwI GGATC 2 cut(s) 146, 159
ApoI RAATTY 1 cut(s) 718
AseI ATTAAT 1 cut(s) 20
Asp700I GAANNNNTTC 2 cut(s) 649, 759
AspLEI GCGC 1 cut(s) 1592
AspS9I GGNCC 1 cut(s) 1630
AsuC2I CCSGG 1 cut(s) 1664
AsuHPI GGTGA 3 cut(s) 425, 652, 1514
AvaII GGWCC 1 cut(s) 1630
BamHI GGATCC 1 cut(s) 151
BarI GAAGNNNNNNTAC 2 cut(s) 1236, 1268
BauI CACGAG 1 cut(s) 1218
Bbv12I GWGCWC 1 cut(s) 894
BccI CCATC 5 cut(s) 250, 1019, 1421, 1570, 1620
BcgI CGANNNNNNTGC 2 cut(s) 386, 420
BciT130I CCWGG 3 cut(s) 675, 884, 1353
BclI TGATCA 3 cut(s) 34, 375, 802
BcnI CCSGG 1 cut(s) 1664
BcoDI GTCTC 3 cut(s) 272, 814, 1391
BcuI ACTAGT 1 cut(s) 766
BfaI CTAG 5 cut(s) 171, 483, 560, 642, 767
BfmI CTRYAG 3 cut(s) 342, 1563, 1685
Bme1390I CCNGG 4 cut(s) 675, 884, 1353, 1664
Bme18I GGWCC 1 cut(s) 1630
BmgT120I GGNCC 1 cut(s) 1630
BmiI GGNNCC 4 cut(s) 153, 1009, 1631, 1632
BmrFI CCNGG 4 cut(s) 675, 884, 1353, 1664
BmsI GCATC 3 cut(s) 976, 1556, 1577
BplI GAGNNNNNCTC 2 cut(s) 1422, 1454
Bpu10I CCTNAGC 1 cut(s) 597
BpuEI CTTGAG 1 cut(s) 814
BpuMI CCSGG 1 cut(s) 1664
Bsa29I ATCGAT 1 cut(s) 540
BsaBI GATNNNNATC 1 cut(s) 374
BsaJI CCNNGG 2 cut(s) 489, 1748
Bse3DI GCAATG 2 cut(s) 204, 333
Bse8I GATNNNNATC 1 cut(s) 374
BseBI CCWGG 3 cut(s) 675, 884, 1353
BseCI ATCGAT 1 cut(s) 540
BseDI CCNNGG 2 cut(s) 489, 1748
BseGI GGATG 5 cut(s) 832, 1278, 1476, 1568, 1631
BseJI GATNNNNATC 1 cut(s) 374
BseMI GCAATG 2 cut(s) 204, 333
Bsh1236I CGCG 1 cut(s) 1489
Bsh1285I CGRYCG 1 cut(s) 514
BshVI ATCGAT 1 cut(s) 540
BsiEI CGRYCG 1 cut(s) 514
BsiHKAI GWGCWC 1 cut(s) 894
BsiSI CCGG 1 cut(s) 1664
BslFI GGGAC 4 cut(s) 203, 465, 1616, 1646
BsmAI GTCTC 3 cut(s) 272, 814, 1391
BsmFI GGGAC 4 cut(s) 203, 465, 1616, 1646
Bsp1286I GDGCHC 1 cut(s) 894
Bsp1407I TGTACA 1 cut(s) 1171
Bsp143I GATC 6 cut(s) 34, 151, 375, 556, 802, 1761
Bsp19I CCATGG 1 cut(s) 1748
BspACI CCGC 2 cut(s) 514, 1307
BspDI ATCGAT 1 cut(s) 540
BspFNI CGCG 1 cut(s) 1489
BspHI TCATGA 1 cut(s) 805
BspLI GGNNCC 4 cut(s) 153, 1009, 1631, 1632
BspMAI CTGCAG 2 cut(s) 346, 1689
BspPI GGATC 2 cut(s) 146, 159
BsrDI GCAATG 2 cut(s) 204, 333
BsrGI TGTACA 1 cut(s) 1171
BssECI CCNNGG 2 cut(s) 489, 1748
BssMI GATC 6 cut(s) 34, 151, 375, 556, 802, 1761
BssSI CACGAG 1 cut(s) 1218
BssT1I CCWWGG 2 cut(s) 489, 1748
Bst2BI CACGAG 1 cut(s) 1218
Bst2UI CCWGG 3 cut(s) 675, 884, 1353
Bst4CI ACNGT 5 cut(s) 196, 456, 849, 1524, 1610
Bst6I CTCTTC 2 cut(s) 1041, 1453
BstAUI TGTACA 1 cut(s) 1171
BstDEI CTNAG 3 cut(s) 99, 575, 597
BstDSI CCRYGG 1 cut(s) 1748
BstF5I GGATG 5 cut(s) 832, 1278, 1476, 1568, 1631
BstFNI CGCG 1 cut(s) 1489
BstHHI GCGC 1 cut(s) 1592
BstKTI GATC 6 cut(s) 37, 154, 378, 559, 805, 1764
BstMAI GTCTC 3 cut(s) 272, 814, 1391
BstMBI GATC 6 cut(s) 34, 151, 375, 556, 802, 1761
BstMCI CGRYCG 1 cut(s) 514
BstMWI GCNNNNNNNGC 7 cut(s) 215, 344, 608, 1082, 1316, 1589, 1676
BstNI CCWGG 3 cut(s) 675, 884, 1353
BstNSI RCATGY 3 cut(s) 87, 227, 285
BstSCI CCNGG 4 cut(s) 673, 882, 1351, 1662
BstSFI CTRYAG 3 cut(s) 342, 1563, 1685
BstUI CGCG 1 cut(s) 1489
BstX2I RGATCY 1 cut(s) 151
BstXI CCANNNNNNTGG 1 cut(s) 681
BstYI RGATCY 1 cut(s) 151
Bsu15I ATCGAT 1 cut(s) 540
BsuTUI ATCGAT 1 cut(s) 540
BtgI CCRYGG 1 cut(s) 1748
BtgZI GCGATG 1 cut(s) 1470
BtsCI GGATG 5 cut(s) 832, 1278, 1476, 1568, 1631
BtsI GCAGTG 4 cut(s) 299, 321, 894, 1281
BtsIMutI CAGTG 5 cut(s) 192, 299, 321, 894, 1281
CciI TCATGA 1 cut(s) 805
CfoI GCGC 1 cut(s) 1592
Cfr13I GGNCC 1 cut(s) 1630
ClaI ATCGAT 1 cut(s) 540
CseI GACGC 1 cut(s) 863
CsiI ACCWGGT 1 cut(s) 1351
Csp6I GTAC 5 cut(s) 478, 553, 1172, 1349, 1359
CspCI CAANNNNNGTGG 2 cut(s) 1206, 1241
CviQI GTAC 5 cut(s) 478, 553, 1172, 1349, 1359
DdeI CTNAG 3 cut(s) 99, 575, 597
DpnI GATC 6 cut(s) 36, 153, 377, 558, 804, 1763
DpnII GATC 6 cut(s) 34, 151, 375, 556, 802, 1761
Eam1104I CTCTTC 2 cut(s) 1041, 1453
EarI CTCTTC 2 cut(s) 1041, 1453
Eco130I CCWWGG 2 cut(s) 489, 1748
Eco32I GATATC 1 cut(s) 1021
Eco47I GGWCC 1 cut(s) 1630
Eco57I CTGAAG 2 cut(s) 636, 1518
EcoO109I RGGNCCY 1 cut(s) 1630
EcoRII CCWGG 3 cut(s) 673, 882, 1351
EcoRV GATATC 1 cut(s) 1021
EcoT14I CCWWGG 2 cut(s) 489, 1748
EcoT22I ATGCAT 1 cut(s) 1298
ErhI CCWWGG 2 cut(s) 489, 1748
FaqI GGGAC 4 cut(s) 203, 465, 1616, 1646
FauNDI CATATG 2 cut(s) 1068, 1758
FbaI TGATCA 3 cut(s) 34, 375, 802
FblI GTMKAC 2 cut(s) 510, 688
FokI GGATG 5 cut(s) 819, 1285, 1463, 1555, 1638
FspBI CTAG 5 cut(s) 171, 483, 560, 642, 767
GlaI GCGC 1 cut(s) 1591
HapII CCGG 1 cut(s) 1664
HgaI GACGC 1 cut(s) 863
HhaI GCGC 1 cut(s) 1592
Hin6I GCGC 1 cut(s) 1590
HinP1I GCGC 1 cut(s) 1590
HincII GTYRAC 1 cut(s) 511
HindII GTYRAC 1 cut(s) 511
HinfI GANTC 5 cut(s) 138, 157, 571, 690, 1542
HpaII CCGG 1 cut(s) 1664
HphI GGTGA 3 cut(s) 425, 652, 1514
Hpy166II GTNNAC 4 cut(s) 287, 511, 689, 1230
Hpy188I TCNGA 5 cut(s) 156, 655, 942, 1366, 1705
Hpy188III TCNNGA 8 cut(s) 142, 379, 483, 793, 806, 840, 908, 1113
Hpy8I GTNNAC 4 cut(s) 287, 511, 689, 1230
Hpy99I CGWCG 1 cut(s) 857
HpyCH4III ACNGT 5 cut(s) 196, 456, 849, 1524, 1610
HpyCH4IV ACGT 1 cut(s) 680
HpyF10VI GCNNNNNNNGC 7 cut(s) 215, 344, 608, 1082, 1316, 1589, 1676
HpyF3I CTNAG 3 cut(s) 99, 575, 597
HpySE526I ACGT 1 cut(s) 680
HspAI GCGC 1 cut(s) 1590
KflI GGGWCCC 1 cut(s) 1630
Ksp22I TGATCA 3 cut(s) 34, 375, 802
Kzo9I GATC 6 cut(s) 34, 151, 375, 556, 802, 1761
LmnI GCTCC 2 cut(s) 215, 1115
LweI GCATC 3 cut(s) 976, 1556, 1577
MabI ACCWGGT 1 cut(s) 1351
MaeI CTAG 5 cut(s) 171, 483, 560, 642, 767
MaeII ACGT 1 cut(s) 680
MaeIII GTNAC 6 cut(s) 581, 1027, 1251, 1490, 1518, 1610
MalI GATC 6 cut(s) 36, 153, 377, 558, 804, 1763
MboI GATC 6 cut(s) 34, 151, 375, 556, 802, 1761
MboII GAAGA 7 cut(s) 272, 394, 580, 976, 1058, 1440, 1707
MfeI CAATTG 2 cut(s) 38, 118
MflI RGATCY 1 cut(s) 151
MhlI GDGCHC 1 cut(s) 894
MlyI GAGTC 3 cut(s) 166, 684, 1536
MmeI TCCRAC 1 cut(s) 480
Mph1103I ATGCAT 1 cut(s) 1298
MroXI GAANNNNTTC 2 cut(s) 649, 759
MseI TTAA 4 cut(s) 20, 78, 897, 914
MslI CAYNNNNRTG 3 cut(s) 810, 972, 1190
MspA1I CMGCKG 2 cut(s) 347, 1337
MspI CCGG 1 cut(s) 1664
MspR9I CCNGG 4 cut(s) 675, 884, 1353, 1664
MunI CAATTG 2 cut(s) 38, 118
MvaI CCWGG 3 cut(s) 675, 884, 1353
MvnI CGCG 1 cut(s) 1489
MwoI GCNNNNNNNGC 7 cut(s) 215, 344, 608, 1082, 1316, 1589, 1676
NciI CCSGG 1 cut(s) 1664
NcoI CCATGG 1 cut(s) 1748
NdeI CATATG 2 cut(s) 1068, 1758
NdeII GATC 6 cut(s) 34, 151, 375, 556, 802, 1761
NlaIV GGNNCC 4 cut(s) 153, 1009, 1631, 1632
NmuCI GTSAC 3 cut(s) 581, 1027, 1610
NsiI ATGCAT 1 cut(s) 1298
NspI RCATGY 3 cut(s) 87, 227, 285
PagI TCATGA 1 cut(s) 805
PciI ACATGT 3 cut(s) 83, 223, 281
PdmI GAANNNNTTC 2 cut(s) 649, 759
PfeI GAWTC 2 cut(s) 138, 571
PflFI GACNNNGTC 1 cut(s) 194
PfoI TCCNGGA 1 cut(s) 673
PleI GAGTC 3 cut(s) 165, 684, 1536
PpsI GAGTC 3 cut(s) 165, 684, 1536
PpuMI RGGWCCY 1 cut(s) 1630
PscI ACATGT 3 cut(s) 83, 223, 281
PshBI ATTAAT 1 cut(s) 20
PsiI TTATAA 1 cut(s) 50
Psp5II RGGWCCY 1 cut(s) 1630
Psp6I CCWGG 3 cut(s) 673, 882, 1351
PspGI CCWGG 3 cut(s) 673, 882, 1351
PspN4I GGNNCC 4 cut(s) 153, 1009, 1631, 1632
PspPI GGNCC 1 cut(s) 1630
PspPPI RGGWCCY 1 cut(s) 1630
PstI CTGCAG 2 cut(s) 346, 1689
PsuI RGATCY 1 cut(s) 151
PsyI GACNNNGTC 1 cut(s) 194
PvuII CAGCTG 2 cut(s) 347, 1337
RsaI GTAC 5 cut(s) 479, 554, 1173, 1350, 1360
RsaNI GTAC 5 cut(s) 478, 553, 1172, 1349, 1359
RseI CAYNNNNRTG 3 cut(s) 810, 972, 1190
SalI GTCGAC 1 cut(s) 509
SaqAI TTAA 4 cut(s) 20, 78, 897, 914
Sau3AI GATC 6 cut(s) 34, 151, 375, 556, 802, 1761
Sau96I GGNCC 1 cut(s) 1630
SchI GAGTC 3 cut(s) 166, 684, 1536
ScrFI CCNGG 4 cut(s) 675, 884, 1353, 1664
SduI GDGCHC 1 cut(s) 894
SexAI ACCWGGT 1 cut(s) 1351
SfaNI GCATC 3 cut(s) 976, 1556, 1577
SfcI CTRYAG 3 cut(s) 342, 1563, 1685
SinI GGWCC 1 cut(s) 1630
SmiMI CAYNNNNRTG 3 cut(s) 810, 972, 1190
SmlI CTYRAG 1 cut(s) 793
SmoI CTYRAG 1 cut(s) 793
SpeI ACTAGT 1 cut(s) 766
SsiI CCGC 2 cut(s) 514, 1307
SspMI CTAG 5 cut(s) 171, 483, 560, 642, 767
StyD4I CCNGG 4 cut(s) 673, 882, 1351, 1662
StyI CCWWGG 2 cut(s) 489, 1748
TaaI ACNGT 5 cut(s) 196, 456, 849, 1524, 1610
TaiI ACGT 1 cut(s) 683
TaqI TCGA 6 cut(s) 249, 406, 510, 540, 852, 1764
TatI WGTACW 2 cut(s) 477, 1171
TauI GCSGC 1 cut(s) 1310
TfiI GAWTC 2 cut(s) 138, 571
Tru1I TTAA 4 cut(s) 20, 78, 897, 914
Tru9I TTAA 4 cut(s) 20, 78, 897, 914
TscAI CASTG 5 cut(s) 199, 306, 328, 894, 1288
TseFI GTSAC 3 cut(s) 581, 1027, 1610
Tsp45I GTSAC 3 cut(s) 581, 1027, 1610
TspRI CASTG 5 cut(s) 199, 306, 328, 894, 1288
Tth111I GACNNNGTC 1 cut(s) 194
VpaK11BI GGWCC 1 cut(s) 1630
VspI ATTAAT 1 cut(s) 20
XapI RAATTY 1 cut(s) 718
XbaI TCTAGA 1 cut(s) 482
XceI RCATGY 3 cut(s) 87, 227, 285
XcmI CCANNNNNNNNNTGG 1 cut(s) 496
XmiI GTMKAC 2 cut(s) 510, 688
XmnI GAANNNNTTC 2 cut(s) 649, 759
XspI CTAG 5 cut(s) 171, 483, 560, 642, 767
Zsp2I ATGCAT 1 cut(s) 1298
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.