MD11G1165600.v1.1

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000157
Physical Location & Seq
Reverse (-)
17483956 .. 17489757
5802 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1165600.v1.1.491

Sequence Viewer

Length: 1869 bp
ATGTCTATTCCACGAGCACAAGGTATACCAGCTCCAGCTGGGATTCAAATGGCGGCAGTAAATGGCATTCCGGTTGCTGAAAATGTCATCATCGGCATTCCCGCTTCTACAGAAACTGTCCATCAACTGAACCATCCTTCATGTCATCTACTAGAAGGGACCAACAGAGAGGCCTACTTGAACTTGTGTATGCCCCTCTACAAAGCTGCAATGAAAGGTGACTGGCATACCACCAAAGGCATATTAAATAACAACCGAACACTCTTAACTGCTAGCATAACAAAAGGAAGGGAAACTGTTCTTCACGTTGCAGCAGGAGTAAAGAACAATATTAAATTTGTAGAGGAACTAGTCAAAATGATGGATGAAGAAGACTTGGCACTTCAAGACATTAAAGGAAATACGGCACTGAGCTTTGCTGCTACAACTGGAACTGTAGAAATTGCCGAGATTTTGATACAAAAAAATAGGTCCTTGCCAACAATTCCAGGTGGTCAAGGAATGACACCACTCTATGTGGCTGCTTTGTTTGGACAGTCTAAAATGGCGTGGCATTTATACCATAAAACATATGAAACGTTGGATGAAAAGAGCCGCAGATTTCTATTCTTCTGTTGTATCGATCATGATCTTTATGATTTAGCCCTGAGGTTACTACAAGATGATAGAACATTAGCAACGGCTCGCAAAGGCAGCGGTGAAACGGCCTTGCATGTCTTAGCTCGAAAGTCTTTAGAATTTGGTGACCAAAGTACTCCTGGAATGTGCAGTAGACTTATGAACGCATGGAAAGTACTCCTAGACATGAAGGTTTCTTCCAAAAGAAACTTGAAGCAAACTGAAGCCCTGAAACTGGTCAAATACCTTTGGGAAGAAATGTTGAAACATGACGATGACGAAGTCATGCGTCTGATAAGAGGGCCTTCAAAATTAGTCTTTGATGCAGTGAAATTAGGAAATTATGAATTCTTGTCCGTGCTTATTGACTCTTATCCAGAGTTGGTATGGGAATATGACGACAACAATCGGACTATATTCCATATTGCAGTCTTGCATCGTCATGCGAGTATCTTCAATCTAGTGCATGAGACAGGCTCCATCAAAGATATCATAGCAACATATATTGACAATGAGAAAAACAACATTCTACATCAAGCTGCAAAATTGGCACCTCAAGACCAACTCAATCTTGTGTCTGGAGCGGCTCTTCAAATGCAACGAGAATTAGTATGGTTTGAGGAAGTCGAGAAGATTGTGCAACCTCCCTTCATAGACATGAAAAATAACCAAGACAAAACACCTCGAGAATTATTCACTAGCGAGCATAAGGATCTATTGCGCAAGGGAGAATCATGGATGAAGAACACTGCAAATTCTTGTATGCTTGTTTCAACTATTATCGCCACTGTAGTGTTTTCAGCCGCATTTAGCATTCCAGGGGGTATATCTGATAATAAAGGAACACCAAATTTCGTAAAAGATACAGCATTTCTAATCTTCACCATATCTGATGGAGTAGCACTCTTTTCCTCATCAACTGCAATCCTCATGTTTTTGTACATCCTTACATCGCGGTATGCTGAAAATGACTTTCTCAAATCCTTACCGTTAAAGTTGATGATTGGACTCACATCACTCTTCGTATCTATAACATCGATGATGGTAGCTTTCAGTACAGCATTCTATTTATCTTGTCATTATGAATTAAGATGGGTTCCGGATCTTATATTTATATTTTCATTTGTCCCAGTTGCCTTGTTCGCTTTCTTGCAGTATCCTCTCTTGTCTGACATGTTCTTTTCAACATACCGTTCAAGTCTTCTGTTTCAGCCAAGGAGGGATATGATTTACTACAAAGTCGAGGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

623

Amino Acids

70.12

Weight (kDa)

6.51

Isoelectric Point (pI)

40.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 101 - 190 1.2e-10 Ankyrin repeats (3 copies)
PGG PF13962 451 - 563 3.7e-27 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1340
AccB1I GGYRCC 1 cut(s) 1168
AccBSI CCGCTC 1 cut(s) 1202
AccI GTMKAC 2 cut(s) 25, 772
AccII CGCG 1 cut(s) 1573
AccIII TCCGGA 1 cut(s) 1717
AciI CCGC 7 cut(s) 53, 102, 595, 696, 1202, 1422, 1573
AclI AACGTT 1 cut(s) 578
AclWI GGATC 2 cut(s) 1338, 1728
AcsI RAATTY 5 cut(s) 335, 737, 965, 1372, 1468
AcuI CTGAAG 1 cut(s) 861
AfaI GTAC 4 cut(s) 754, 795, 1559, 1675
AfiI CCNNNNNNNGG 1 cut(s) 853
AflIII ACRYGT 1 cut(s) 1791
AhlI ACTAGT 1 cut(s) 349
AjnI CCWGG 3 cut(s) 487, 757, 1435
AleI CACNNNNGTG 1 cut(s) 1409
AluBI AGCT 7 cut(s) 32, 38, 206, 414, 722, 1157, 1667
AluI AGCT 7 cut(s) 32, 38, 206, 414, 722, 1157, 1667
Alw21I GWGCWC 1 cut(s) 19
Alw26I GTCTC 1 cut(s) 1082
AlwI GGATC 2 cut(s) 1338, 1728
AlwNI CAGNNNCTG 1 cut(s) 116
Ama87I CYCGRG 1 cut(s) 1302
Aor13HI TCCGGA 1 cut(s) 1717
AoxI GGCC 3 cut(s) 171, 705, 920
ApeKI GCWGC 6 cut(s) 206, 311, 419, 521, 693, 1157
ApoI RAATTY 5 cut(s) 335, 737, 965, 1372, 1468
Asp700I GAANNNNTTC 1 cut(s) 297
AspLEI GCGC 1 cut(s) 1341
AspS9I GGNCC 3 cut(s) 159, 471, 920
AsuHPI GGTGA 4 cut(s) 230, 710, 755, 1492
AsuNHI GCTAGC 1 cut(s) 272
AvaI CYCGRG 1 cut(s) 1302
AvaII GGWCC 2 cut(s) 159, 471
AxyI CCTNAGG 1 cut(s) 647
BanI GGYRCC 1 cut(s) 1168
BauI CACGAG 1 cut(s) 12
BbsI GAAGAC 2 cut(s) 378, 1811
Bbv12I GWGCWC 1 cut(s) 19
BbvI GCAGC 6 cut(s) 193, 323, 406, 508, 705, 1144
BccI CCATC 7 cut(s) 129, 141, 355, 1106, 1505, 1654, 1704
BceAI ACGGC 3 cut(s) 420, 696, 720
BciT130I CCWGG 3 cut(s) 489, 759, 1437
BciVI GTATCC 1 cut(s) 1785
BcoDI GTCTC 1 cut(s) 1082
BcuI ACTAGT 1 cut(s) 349
BfaI CTAG 7 cut(s) 152, 273, 350, 800, 1079, 1317, 1867
BfmI CTRYAG 3 cut(s) 108, 435, 1407
BfuI GTATCC 1 cut(s) 1785
BmcAI AGTACT 2 cut(s) 754, 795
Bme1390I CCNGG 3 cut(s) 489, 759, 1437
Bme18I GGWCC 2 cut(s) 159, 471
BmeT110I CYCGRG 1 cut(s) 1302
BmgT120I GGNCC 3 cut(s) 159, 471, 920
BmiI GGNNCC 4 cut(s) 160, 1096, 1170, 1716
BmrFI CCNGG 3 cut(s) 489, 759, 1437
BmrI ACTGGG 1 cut(s) 1742
BmsI GCATC 2 cut(s) 931, 1063
BmtI GCTAGC 1 cut(s) 276
BmuI ACTGGG 1 cut(s) 1742
BpiI GAAGAC 2 cut(s) 378, 1811
BplI GAGNNNNNCTC 4 cut(s) 1079, 1111, 1506, 1538
BpmI CTGGAG 2 cut(s) 18, 1218
BpuEI CTTGAG 1 cut(s) 1158
Bsa29I ATCGAT 2 cut(s) 621, 1655
BsaBI GATNNNNATC 1 cut(s) 627
BsaJI CCNNGG 2 cut(s) 1436, 1832
BsaWI WCCGGW 2 cut(s) 70, 1717
Bsc4I CCNNNNNNNGG 1 cut(s) 853
Bse1I ACTGG 4 cut(s) 227, 433, 858, 1748
Bse21I CCTNAGG 1 cut(s) 647
Bse3DI GCAATG 1 cut(s) 216
Bse8I GATNNNNATC 1 cut(s) 627
BseAI TCCGGA 1 cut(s) 1717
BseBI CCWGG 3 cut(s) 489, 759, 1437
BseCI ATCGAT 2 cut(s) 621, 1655
BseDI CCNNGG 2 cut(s) 1436, 1832
BseGI GGATG 5 cut(s) 133, 370, 589, 1362, 1560
BseJI GATNNNNATC 1 cut(s) 627
BseLI CCNNNNNNNGG 1 cut(s) 853
BseMI GCAATG 1 cut(s) 216
BseMII CTCAG 2 cut(s) 401, 638
BseNI ACTGG 4 cut(s) 227, 433, 858, 1748
BseXI GCAGC 6 cut(s) 193, 323, 406, 508, 705, 1144
BseYI CCCAGC 1 cut(s) 38
BsgI GTGCAG 1 cut(s) 787
Bsh1236I CGCG 1 cut(s) 1573
BshFI GGCC 3 cut(s) 173, 707, 922
BshNI GGYRCC 1 cut(s) 1168
BshVI ATCGAT 2 cut(s) 621, 1655
BsiHKAI GWGCWC 1 cut(s) 19
BsiHKCI CYCGRG 1 cut(s) 1302
BsiSI CCGG 2 cut(s) 71, 1718
BslFI GGGAC 2 cut(s) 172, 1730
BslI CCNNNNNNNGG 1 cut(s) 853
BsmAI GTCTC 1 cut(s) 1082
BsmFI GGGAC 2 cut(s) 172, 1730
BsmI GAATGC 4 cut(s) 66, 96, 1431, 1679
BsnI GGCC 3 cut(s) 173, 707, 922
BsoBI CYCGRG 1 cut(s) 1302
Bsp1286I GDGCHC 1 cut(s) 19
Bsp13I TCCGGA 1 cut(s) 1717
Bsp1407I TGTACA 1 cut(s) 1557
Bsp143I GATC 4 cut(s) 622, 628, 1330, 1720
BspACI CCGC 7 cut(s) 53, 102, 595, 696, 1202, 1422, 1573
BspANI GGCC 3 cut(s) 173, 707, 922
BspCNI CTCAG 2 cut(s) 402, 639
BspDI ATCGAT 2 cut(s) 621, 1655
BspEI TCCGGA 1 cut(s) 1717
BspFNI CGCG 1 cut(s) 1573
BspHI TCATGA 1 cut(s) 625
BspLI GGNNCC 4 cut(s) 160, 1096, 1170, 1716
BspOI GCTAGC 1 cut(s) 276
BspPI GGATC 2 cut(s) 1338, 1728
BspQI GCTCTTC 1 cut(s) 1212
BspT107I GGYRCC 1 cut(s) 1168
BsrBI CCGCTC 1 cut(s) 1202
BsrDI GCAATG 1 cut(s) 216
BsrGI TGTACA 1 cut(s) 1557
BsrI ACTGG 4 cut(s) 227, 433, 858, 1748
BssECI CCNNGG 2 cut(s) 1436, 1832
BssMI GATC 4 cut(s) 622, 628, 1330, 1720
BssNAI GTATAC 1 cut(s) 26
BssSI CACGAG 1 cut(s) 12
BssT1I CCWWGG 1 cut(s) 1832
Bst1107I GTATAC 1 cut(s) 26
Bst2BI CACGAG 1 cut(s) 12
Bst2UI CCWGG 3 cut(s) 489, 759, 1437
Bst4CI ACNGT 7 cut(s) 118, 298, 436, 537, 1408, 1608, 1811
Bst6I CTCTTC 2 cut(s) 1212, 1643
BstAUI TGTACA 1 cut(s) 1557
BstC8I GCNNGC 3 cut(s) 274, 685, 1322
BstDEI CTNAG 3 cut(s) 410, 647, 718
BstEII GGTNACC 1 cut(s) 743
BstF5I GGATG 5 cut(s) 133, 370, 589, 1362, 1560
BstFNI CGCG 1 cut(s) 1573
BstHHI GCGC 1 cut(s) 1341
BstKTI GATC 4 cut(s) 625, 631, 1333, 1723
BstMAI GTCTC 1 cut(s) 1082
BstMBI GATC 4 cut(s) 622, 628, 1330, 1720
BstMWI GCNNNNNNNGC 3 cut(s) 693, 1166, 1760
BstNI CCWGG 3 cut(s) 489, 759, 1437
BstNSI RCATGY 2 cut(s) 716, 1795
BstPI GGTNACC 1 cut(s) 743
BstSCI CCNGG 3 cut(s) 487, 757, 1435
BstSFI CTRYAG 3 cut(s) 108, 435, 1407
BstUI CGCG 1 cut(s) 1573
BstV1I GCAGC 6 cut(s) 193, 323, 406, 508, 705, 1144
BstV2I GAAGAC 2 cut(s) 378, 1811
BstX2I RGATCY 2 cut(s) 1330, 1720
BstYI RGATCY 2 cut(s) 1330, 1720
BstZ17I GTATAC 1 cut(s) 26
Bsu15I ATCGAT 2 cut(s) 621, 1655
Bsu36I CCTNAGG 1 cut(s) 647
BsuI GTATCC 1 cut(s) 1785
BsuRI GGCC 3 cut(s) 173, 707, 922
BsuTUI ATCGAT 2 cut(s) 621, 1655
BtgZI GCGATG 1 cut(s) 1554
BtsCI GGATG 5 cut(s) 133, 370, 589, 1362, 1560
BtsI GCAGTG 2 cut(s) 951, 1365
BtsIMutI CAGTG 4 cut(s) 407, 951, 1365, 1404
Cac8I GCNNGC 3 cut(s) 274, 685, 1322
CaiI CAGNNNCTG 1 cut(s) 116
CciI TCATGA 1 cut(s) 625
CfoI GCGC 1 cut(s) 1341
Cfr13I GGNCC 3 cut(s) 159, 471, 920
ClaI ATCGAT 2 cut(s) 621, 1655
CseI GACGC 1 cut(s) 896
Csp6I GTAC 4 cut(s) 753, 794, 1558, 1674
CviQI GTAC 4 cut(s) 753, 794, 1558, 1674
DdeI CTNAG 3 cut(s) 410, 647, 718
DpnI GATC 4 cut(s) 624, 630, 1332, 1722
DpnII GATC 4 cut(s) 622, 628, 1330, 1720
Eam1104I CTCTTC 2 cut(s) 1212, 1643
EarI CTCTTC 2 cut(s) 1212, 1643
Eco130I CCWWGG 1 cut(s) 1832
Eco147I AGGCCT 1 cut(s) 173
Eco32I GATATC 1 cut(s) 1108
Eco47I GGWCC 2 cut(s) 159, 471
Eco57I CTGAAG 1 cut(s) 861
Eco81I CCTNAGG 1 cut(s) 647
Eco88I CYCGRG 1 cut(s) 1302
Eco91I GGTNACC 1 cut(s) 743
EcoO109I RGGNCCY 2 cut(s) 471, 920
EcoO65I GGTNACC 1 cut(s) 743
EcoRI GAATTC 1 cut(s) 965
EcoRII CCWGG 3 cut(s) 487, 757, 1435
EcoRV GATATC 1 cut(s) 1108
EcoT14I CCWWGG 1 cut(s) 1832
ErhI CCWWGG 1 cut(s) 1832
FalI AAGNNNNNCTT 2 cut(s) 907, 939
FaqI GGGAC 2 cut(s) 172, 1730
FauI CCCGC 1 cut(s) 109
FauNDI CATATG 1 cut(s) 571
FblI GTMKAC 2 cut(s) 25, 772
FokI GGATG 5 cut(s) 120, 377, 596, 1369, 1547
FspBI CTAG 7 cut(s) 152, 273, 350, 800, 1079, 1317, 1867
FspI TGCGCA 1 cut(s) 1340
GlaI GCGC 1 cut(s) 1340
GsaI CCCAGC 1 cut(s) 42
GsuI CTGGAG 2 cut(s) 18, 1218
HaeIII GGCC 3 cut(s) 173, 707, 922
HapII CCGG 2 cut(s) 71, 1718
HgaI GACGC 1 cut(s) 896
HhaI GCGC 1 cut(s) 1341
Hin6I GCGC 1 cut(s) 1339
HinP1I GCGC 1 cut(s) 1339
HinfI GANTC 4 cut(s) 43, 986, 1349, 1626
HpaII CCGG 2 cut(s) 71, 1718
HphI GGTGA 4 cut(s) 230, 710, 755, 1492
Hpy166II GTNNAC 2 cut(s) 26, 773
Hpy188I TCNGA 5 cut(s) 912, 1029, 1450, 1510, 1789
Hpy188III TCNNGA 8 cut(s) 386, 626, 995, 1175, 1197, 1246, 1304, 1718
Hpy8I GTNNAC 2 cut(s) 26, 773
HpyAV CCTTC 6 cut(s) 147, 149, 282, 802, 933, 1276
HpyCH4III ACNGT 7 cut(s) 118, 298, 436, 537, 1408, 1608, 1811
HpyCH4IV ACGT 2 cut(s) 306, 578
HpyF10VI GCNNNNNNNGC 3 cut(s) 693, 1166, 1760
HpyF3I CTNAG 3 cut(s) 410, 647, 718
HpySE526I ACGT 2 cut(s) 306, 578
HspAI GCGC 1 cut(s) 1339
Kpn2I TCCGGA 1 cut(s) 1717
Kzo9I GATC 4 cut(s) 622, 628, 1330, 1720
LguI GCTCTTC 1 cut(s) 1212
LmnI GCTCC 3 cut(s) 37, 1100, 1199
Lsp1109I GCAGC 6 cut(s) 193, 323, 406, 508, 705, 1144
LweI GCATC 2 cut(s) 931, 1063
MaeI CTAG 7 cut(s) 152, 273, 350, 800, 1079, 1317, 1867
MaeII ACGT 2 cut(s) 306, 578
MaeIII GTNAC 3 cut(s) 218, 651, 743
MalI GATC 4 cut(s) 624, 630, 1332, 1722
MbiI CCGCTC 1 cut(s) 1202
MboI GATC 4 cut(s) 622, 628, 1330, 1720
MflI RGATCY 2 cut(s) 1330, 1720
MhlI GDGCHC 1 cut(s) 19
MlyI GAGTC 2 cut(s) 980, 1620
MmeI TCCRAC 1 cut(s) 561
MroI TCCGGA 1 cut(s) 1717
MroXI GAANNNNTTC 1 cut(s) 297
MseI TTAA 6 cut(s) 245, 266, 333, 393, 1610, 1706
MslI CAYNNNNRTG 4 cut(s) 891, 1059, 1274, 1409
MspA1I CMGCKG 2 cut(s) 38, 696
MspI CCGG 2 cut(s) 71, 1718
MspR9I CCNGG 3 cut(s) 489, 759, 1437
Mva1269I GAATGC 4 cut(s) 66, 96, 1431, 1679
MvaI CCWGG 3 cut(s) 489, 759, 1437
MvnI CGCG 1 cut(s) 1573
MwoI GCNNNNNNNGC 3 cut(s) 693, 1166, 1760
NdeI CATATG 1 cut(s) 571
NdeII GATC 4 cut(s) 622, 628, 1330, 1720
NheI GCTAGC 1 cut(s) 272
NlaIV GGNNCC 4 cut(s) 160, 1096, 1170, 1716
NmeAIII GCCGAG 1 cut(s) 472
NmuCI GTSAC 2 cut(s) 218, 743
NsbI TGCGCA 1 cut(s) 1340
NspI RCATGY 2 cut(s) 716, 1795
OliI CACNNNNGTG 1 cut(s) 1409
PaeR7I CTCGAG 1 cut(s) 1302
PagI TCATGA 1 cut(s) 625
PceI AGGCCT 1 cut(s) 173
PciI ACATGT 1 cut(s) 1791
PciSI GCTCTTC 1 cut(s) 1212
PctI GAATGC 4 cut(s) 66, 96, 1431, 1679
PdmI GAANNNNTTC 1 cut(s) 297
PfeI GAWTC 2 cut(s) 43, 1349
PflFI GACNNNGTC 1 cut(s) 899
PfoI TCCNGGA 1 cut(s) 757
PleI GAGTC 2 cut(s) 980, 1620
PpsI GAGTC 2 cut(s) 980, 1620
PpuMI RGGWCCY 1 cut(s) 471
PscI ACATGT 1 cut(s) 1791
Psp1406I AACGTT 1 cut(s) 578
Psp5II RGGWCCY 1 cut(s) 471
Psp6I CCWGG 3 cut(s) 487, 757, 1435
PspEI GGTNACC 1 cut(s) 743
PspFI CCCAGC 1 cut(s) 38
PspGI CCWGG 3 cut(s) 487, 757, 1435
PspN4I GGNNCC 4 cut(s) 160, 1096, 1170, 1716
PspPI GGNCC 3 cut(s) 159, 471, 920
PspPPI RGGWCCY 1 cut(s) 471
PstNI CAGNNNCTG 1 cut(s) 116
PsuI RGATCY 2 cut(s) 1330, 1720
PsyI GACNNNGTC 1 cut(s) 899
PvuII CAGCTG 1 cut(s) 38
RsaI GTAC 4 cut(s) 754, 795, 1559, 1675
RsaNI GTAC 4 cut(s) 753, 794, 1558, 1674
RseI CAYNNNNRTG 4 cut(s) 891, 1059, 1274, 1409
SapI GCTCTTC 1 cut(s) 1212
SaqAI TTAA 6 cut(s) 245, 266, 333, 393, 1610, 1706
Sau3AI GATC 4 cut(s) 622, 628, 1330, 1720
Sau96I GGNCC 3 cut(s) 159, 471, 920
ScaI AGTACT 2 cut(s) 754, 795
SchI GAGTC 2 cut(s) 980, 1620
ScrFI CCNGG 3 cut(s) 489, 759, 1437
SduI GDGCHC 1 cut(s) 19
SfaNI GCATC 2 cut(s) 931, 1063
SfcI CTRYAG 3 cut(s) 108, 435, 1407
Sfr274I CTCGAG 1 cut(s) 1302
SinI GGWCC 2 cut(s) 159, 471
SlaI CTCGAG 1 cut(s) 1302
SmiMI CAYNNNNRTG 4 cut(s) 891, 1059, 1274, 1409
SmlI CTYRAG 2 cut(s) 1173, 1302
SmoI CTYRAG 2 cut(s) 1173, 1302
SpeI ACTAGT 1 cut(s) 349
SseBI AGGCCT 1 cut(s) 173
SsiI CCGC 7 cut(s) 53, 102, 595, 696, 1202, 1422, 1573
SspI AATATT 1 cut(s) 331
SspMI CTAG 7 cut(s) 152, 273, 350, 800, 1079, 1317, 1867
StuI AGGCCT 1 cut(s) 173
StyD4I CCNGG 3 cut(s) 487, 757, 1435
StyI CCWWGG 1 cut(s) 1832
TaaI ACNGT 7 cut(s) 118, 298, 436, 537, 1408, 1608, 1811
TaiI ACGT 2 cut(s) 309, 581
TaqI TCGA 6 cut(s) 621, 724, 1245, 1303, 1655, 1860
TatI WGTACW 4 cut(s) 752, 793, 1557, 1673
TauI GCSGC 4 cut(s) 56, 597, 1205, 1424
TfiI GAWTC 2 cut(s) 43, 1349
Tru1I TTAA 6 cut(s) 245, 266, 333, 393, 1610, 1706
Tru9I TTAA 6 cut(s) 245, 266, 333, 393, 1610, 1706
TscAI CASTG 4 cut(s) 414, 951, 1372, 1411
TseFI GTSAC 2 cut(s) 218, 743
TseI GCWGC 6 cut(s) 206, 311, 419, 521, 693, 1157
Tsp45I GTSAC 2 cut(s) 218, 743
TspGWI ACGGA 1 cut(s) 964
TspRI CASTG 4 cut(s) 414, 951, 1372, 1411
Tth111I GACNNNGTC 1 cut(s) 899
VpaK11BI GGWCC 2 cut(s) 159, 471
XapI RAATTY 5 cut(s) 335, 737, 965, 1372, 1468
XceI RCATGY 2 cut(s) 716, 1795
XcmI CCANNNNNNNNNTGG 2 cut(s) 755, 1002
XhoI CTCGAG 1 cut(s) 1302
XmiI GTMKAC 2 cut(s) 25, 772
XmnI GAANNNNTTC 1 cut(s) 297
XspI CTAG 7 cut(s) 152, 273, 350, 800, 1079, 1317, 1867
ZrmI AGTACT 2 cut(s) 754, 795
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.