Rmu_sc0001047.1_g000011

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001047.1
OG0000157
Physical Location & Seq
Reverse (-)
47470 .. 57271
9802 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001047.1_g000011.1.cds

Sequence Viewer

Length: 2193 bp
atgggaccggtgcgggggcctagagtgaccggatggcagagtttttgcctggtttggatttcaagtcagcttggtactggcgagagcagcacccaagagaacgccgcctgcatcgtgcagtgtctgaggccaaccaaggctgtcatcctcctccagggtttgttgtacgtacgccggcggccgcaaggcttcatcgtcctggtcgtcgagtacactgcctcgtcgccggaatcaacgagtatccgagcaacgaaagtcgagggttgcaatcgatcgaattggggaggtatgtatgtggatttggaccattttgctttggatgtggatttggcggaaacatcaaatggctcggccggtggttatgtcgtctcggaaactgaacgggtgctcgtgaaacagaggcctgatcaccttttcgaaatctcagttccaactaaaggggtggtaattcggtggagacctttgttcaatttggaactaatgtctagcccacaagcacacaattctgtaccgcctggaattcaattgacggctactggagagctataccttaatacatgtgtgccactctctaagtatgcactaaaaggcaattgggaagctgctgaacgaatcttgaaggaggatcggaggcttttgacttcttgcataacaagaggatgggacactgtccttcacattgcagcaggagcaagacatgttcactttgtggagaagctggtcgaaatgatggatgaacaagacttggcactgcaagacacaaatcgaaacactgccttcagcattgctgctgctgctggaagtattgaaattgcagagattatgatgaagaagaacaagaatttgccaacaattcgaggcggtgaaggaatgacaccactctatatggctgccttgttgggagaatctgtaatggcagaatacttgtactctggaaccaaggaaatgttgaaggaagccgacaagcaagcgttgttttttacttgtatcgataatgatctagctatgaagatgctaagaagtgacagagaattattatctaaggctcgtaatcccaaacaggaaacagctttgcatatcttggctagaatgccttcagaattcaccagccaaagtccaggaatgcagagtagactcatcaactcatgttggaagttctcacacaatggaaacttgaaacaagtcaatgaagcccttcgactagtccaatgcctttggacagaaatcttgagaaatgatcatgacgatgtgatgagactaatcaaacatccttcaaaattactgttcgacgctacaaaattaggaaattatgagttcctggcagtgcttattaactcttatcctgacttaatatgggaacttgatgacaaaaatcggagtataatccatgttgctgttttgcatcgtcatgcaagtatcttcaatttagtgcatgagataggttccatcaaggatatcttagtgacatttactgatgatgatgagagtaataacattttacatatggctgcaaaattagcacctcaaaatcaactcaaccttgtatcaggagcagctcttcaaatgcagcgagagttggaagtaaaaaagattgtacaacctaactttatagagatgaaaaacaagaaaggtaaaacaccacgagaattgttcacaagtgagcataaagggttgttgcacagaggagaagcatggatgaagcacactgcaaattcatgtatgattgttgcggctcttatcgcaactgtcgtgttttcagctgcatttagcttacctggtggtacatctgataacacaggacagccaaactttttaaaggagactgctttcctaatctttgccatagcagatggagtggcactcgtttcctcttcaacttcaatactgatgttcttgttcatcctcacatcacgttatgctgaaagtgatttcctcaaatcattaccgttgaagttgatgataggactcacatcacttttcatctctatagcatccatgatggtagcttttagcacaaccttctatttagattgtcactatggattaggatgggtcccaaatcttatatttgtatttgcaattgtcccggttgctttgttcgcttttctgcagtttcctctcttgtctgatatgttttcttcaacatactgttcaagtcttgtatttcagccatggaaacatatgatcgagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

730

Amino Acids

81.5

Weight (kDa)

6.86

Isoelectric Point (pI)

45.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1132
AciI CCGC 8 cut(s) 13, 105, 178, 182, 332, 512, 861, 1730
AclWI GGATC 1 cut(s) 633
AcoI YGGCCR 2 cut(s) 179, 351
AcsI RAATTY 4 cut(s) 519, 841, 1100, 1711
AcuI CTGAAG 2 cut(s) 763, 1080
AdeI CACNNNGTG 1 cut(s) 709
AfaI GTAC 8 cut(s) 76, 167, 171, 212, 510, 929, 1596, 1783
AfiI CCNNNNNNNGG 3 cut(s) 14, 154, 437
AflIII ACRYGT 2 cut(s) 557, 697
AgeI ACCGGT 1 cut(s) 7
AhlI ACTAGT 1 cut(s) 1201
AjnI CCWGG 7 cut(s) 48, 153, 198, 514, 1117, 1317, 1774
Alw21I GWGCWC 1 cut(s) 390
Alw26I GTCTC 4 cut(s) 373, 451, 1249, 1814
AlwI GGATC 1 cut(s) 633
AlwNI CAGNNNCTG 1 cut(s) 124
AoxI GGCC 5 cut(s) 17, 128, 179, 351, 401
ApoI RAATTY 4 cut(s) 519, 841, 1100, 1711
AsiGI ACCGGT 1 cut(s) 7
Asp700I GAANNNNTTC 2 cut(s) 1093, 1194
AspS9I GGNCC 4 cut(s) 5, 17, 304, 2053
AsuC2I CCSGG 1 cut(s) 2087
AsuHPI GGTGA 3 cut(s) 401, 875, 1096
AsuII TTCGAA 1 cut(s) 417
AvaII GGWCC 3 cut(s) 5, 304, 2053
BauI CACGAG 2 cut(s) 389, 1641
Bbv12I GWGCWC 1 cut(s) 390
BccI CCATC 7 cut(s) 27, 654, 724, 1454, 1844, 1993, 2043
BceAI ACGGC 1 cut(s) 546
BcgI CGANNNNNNTGC 2 cut(s) 197, 231
BciT130I CCWGG 7 cut(s) 50, 155, 200, 516, 1119, 1319, 1776
BciVI GTATCC 1 cut(s) 251
BclI TGATCA 2 cut(s) 406, 1237
BcnI CCSGG 1 cut(s) 2087
BcoDI GTCTC 4 cut(s) 373, 451, 1249, 1814
BcuI ACTAGT 1 cut(s) 1201
BfaI CTAG 5 cut(s) 21, 486, 1001, 1086, 1202
BfmI CTRYAG 2 cut(s) 1986, 2108
BfuI GTATCC 1 cut(s) 251
Bme1390I CCNGG 8 cut(s) 50, 155, 200, 516, 1119, 1319, 1776, 2087
Bme18I GGWCC 3 cut(s) 5, 304, 2053
BmgT120I GGNCC 4 cut(s) 5, 17, 304, 2053
BmiI GGNNCC 6 cut(s) 6, 18, 937, 1444, 2054, 2055
BmrFI CCNGG 8 cut(s) 50, 155, 200, 516, 1119, 1319, 1776, 2087
BmsI GCATC 4 cut(s) 120, 1002, 1411, 2000
BplI GAGNNNNNCTC 2 cut(s) 1845, 1877
BpmI CTGGAG 2 cut(s) 137, 558
Bpu14I TTCGAA 1 cut(s) 417
BpuEI CTTGAG 1 cut(s) 1249
BpuMI CCSGG 1 cut(s) 2087
Bsa29I ATCGAT 2 cut(s) 271, 990
BsaAI YACGTR 1 cut(s) 169
BsaBI GATNNNNATC 1 cut(s) 996
BsaI GGTCTC 1 cut(s) 451
BsaJI CCNNGG 4 cut(s) 135, 154, 939, 2171
BsaWI WCCGGW 2 cut(s) 7, 29
BsaXI ACNNNNNCTCC 2 cut(s) 894, 924
Bsc4I CCNNNNNNNGG 3 cut(s) 14, 154, 437
Bse118I RCCGGY 3 cut(s) 7, 174, 353
Bse1I ACTGG 2 cut(s) 82, 541
Bse3DI GCAATG 2 cut(s) 678, 783
Bse8I GATNNNNATC 1 cut(s) 996
BseBI CCWGG 7 cut(s) 50, 155, 200, 516, 1119, 1319, 1776
BseCI ATCGAT 2 cut(s) 271, 990
BseDI CCNNGG 4 cut(s) 135, 154, 939, 2171
BseJI GATNNNNATC 1 cut(s) 996
BseLI CCNNNNNNNGG 3 cut(s) 14, 154, 437
BseMI GCAATG 2 cut(s) 678, 783
BseMII CTCAG 2 cut(s) 116, 438
BseNI ACTGG 2 cut(s) 82, 541
BseRI GAGGAG 2 cut(s) 140, 1698
BseX3I CGGCCG 2 cut(s) 179, 351
BsgI GTGCAG 1 cut(s) 137
Bsh1285I CGRYCG 3 cut(s) 182, 275, 354
BshFI GGCC 5 cut(s) 19, 130, 181, 353, 403
BshTI ACCGGT 1 cut(s) 7
BshVI ATCGAT 2 cut(s) 271, 990
BsiEI CGRYCG 3 cut(s) 182, 275, 354
BsiHKAI GWGCWC 1 cut(s) 390
BsiSI CCGG 6 cut(s) 8, 30, 175, 227, 354, 2087
BsiWI CGTACG 1 cut(s) 169
BslFI GGGAC 4 cut(s) 18, 677, 2039, 2069
BslI CCNNNNNNNGG 3 cut(s) 14, 154, 437
BsmAI GTCTC 4 cut(s) 373, 451, 1249, 1814
BsmBI CGTCTC 1 cut(s) 373
BsmFI GGGAC 4 cut(s) 18, 677, 2039, 2069
BsmI GAATGC 2 cut(s) 1095, 1128
BsnI GGCC 5 cut(s) 19, 130, 181, 353, 403
Bso31I GGTCTC 1 cut(s) 451
Bsp119I TTCGAA 1 cut(s) 417
Bsp1286I GDGCHC 1 cut(s) 390
Bsp1407I TGTACA 1 cut(s) 1594
Bsp143I GATC 6 cut(s) 272, 406, 625, 997, 1237, 2184
Bsp19I CCATGG 1 cut(s) 2171
BspACI CCGC 8 cut(s) 13, 105, 178, 182, 332, 512, 861, 1730
BspANI GGCC 5 cut(s) 19, 130, 181, 353, 403
BspCNI CTCAG 2 cut(s) 117, 437
BspDI ATCGAT 2 cut(s) 271, 990
BspHI TCATGA 1 cut(s) 1240
BspLI GGNNCC 6 cut(s) 6, 18, 937, 1444, 2054, 2055
BspMAI CTGCAG 1 cut(s) 2112
BspPI GGATC 1 cut(s) 633
BspQI GCTCTTC 1 cut(s) 1563
BspT104I TTCGAA 1 cut(s) 417
BspTNI GGTCTC 1 cut(s) 451
BsrDI GCAATG 2 cut(s) 678, 783
BsrFI RCCGGY 3 cut(s) 7, 174, 353
BsrGI TGTACA 1 cut(s) 1594
BsrI ACTGG 2 cut(s) 82, 541
BssAI RCCGGY 3 cut(s) 7, 174, 353
BssECI CCNNGG 4 cut(s) 135, 154, 939, 2171
BssMI GATC 6 cut(s) 272, 406, 625, 997, 1237, 2184
BssSI CACGAG 2 cut(s) 389, 1641
BssT1I CCWWGG 3 cut(s) 135, 939, 2171
Bst2BI CACGAG 2 cut(s) 389, 1641
Bst2UI CCWGG 7 cut(s) 50, 155, 200, 516, 1119, 1319, 1776
Bst4CI ACNGT 5 cut(s) 670, 1284, 1747, 1947, 2150
Bst6I CTCTTC 2 cut(s) 1563, 1876
BstAUI TGTACA 1 cut(s) 1594
BstBAI YACGTR 1 cut(s) 169
BstBI TTCGAA 1 cut(s) 417
BstC8I GCNNGC 3 cut(s) 109, 176, 969
BstDEI CTNAG 6 cut(s) 125, 424, 573, 1016, 1041, 1459
BstDSI CCRYGG 1 cut(s) 2171
BstENI CCTNNNNNAGG 1 cut(s) 152
BstKTI GATC 6 cut(s) 275, 409, 628, 1000, 1240, 2187
BstMAI GTCTC 4 cut(s) 373, 451, 1249, 1814
BstMBI GATC 6 cut(s) 272, 406, 625, 997, 1237, 2184
BstMCI CGRYCG 3 cut(s) 182, 275, 354
BstMWI GCNNNNNNNGC 6 cut(s) 87, 689, 794, 1517, 1739, 2099
BstNI CCWGG 7 cut(s) 50, 155, 200, 516, 1119, 1319, 1776
BstNSI RCATGY 2 cut(s) 561, 701
BstSCI CCNGG 8 cut(s) 48, 153, 198, 514, 1117, 1317, 1774, 2085
BstSFI CTRYAG 2 cut(s) 1986, 2108
BstSNI TACGTA 1 cut(s) 169
BstZI CGGCCG 2 cut(s) 179, 351
Bsu15I ATCGAT 2 cut(s) 271, 990
BsuI GTATCC 1 cut(s) 251
BsuRI GGCC 5 cut(s) 19, 130, 181, 353, 403
BsuTUI ATCGAT 2 cut(s) 271, 990
BtgI CCRYGG 1 cut(s) 2171
BtsI GCAGTG 6 cut(s) 125, 213, 749, 771, 1329, 1704
BtsIMutI CAGTG 7 cut(s) 125, 213, 666, 749, 771, 1329, 1704
Cac8I GCNNGC 3 cut(s) 109, 176, 969
CaiI CAGNNNCTG 1 cut(s) 124
CciI TCATGA 1 cut(s) 1240
CciNI GCGGCCGC 1 cut(s) 179
Cfr10I RCCGGY 3 cut(s) 7, 174, 353
Cfr13I GGNCC 4 cut(s) 5, 17, 304, 2053
ClaI ATCGAT 2 cut(s) 271, 990
CseI GACGC 1 cut(s) 1298
CsiI ACCWGGT 1 cut(s) 1774
Csp6I GTAC 8 cut(s) 75, 166, 170, 211, 509, 928, 1595, 1782
CspAI ACCGGT 1 cut(s) 7
CspCI CAANNNNNGTGG 2 cut(s) 1629, 1664
CviQI GTAC 8 cut(s) 75, 166, 170, 211, 509, 928, 1595, 1782
DdeI CTNAG 6 cut(s) 125, 424, 573, 1016, 1041, 1459
DpnI GATC 6 cut(s) 274, 408, 627, 999, 1239, 2186
DpnII GATC 6 cut(s) 272, 406, 625, 997, 1237, 2184
DraI TTTAAA 1 cut(s) 1815
DraIII CACNNNGTG 1 cut(s) 709
EaeI YGGCCR 2 cut(s) 179, 351
EagI CGGCCG 2 cut(s) 179, 351
Eam1104I CTCTTC 2 cut(s) 1563, 1876
EarI CTCTTC 2 cut(s) 1563, 1876
EciI GGCGGA 1 cut(s) 347
EclXI CGGCCG 2 cut(s) 179, 351
Eco105I TACGTA 1 cut(s) 169
Eco130I CCWWGG 3 cut(s) 135, 939, 2171
Eco147I AGGCCT 1 cut(s) 403
Eco31I GGTCTC 1 cut(s) 451
Eco32I GATATC 1 cut(s) 1456
Eco47I GGWCC 3 cut(s) 5, 304, 2053
Eco52I CGGCCG 2 cut(s) 179, 351
Eco57I CTGAAG 2 cut(s) 763, 1080
EcoNI CCTNNNNNAGG 1 cut(s) 152
EcoO109I RGGNCCY 2 cut(s) 17, 2053
EcoRI GAATTC 2 cut(s) 519, 1100
EcoRII CCWGG 7 cut(s) 48, 153, 198, 514, 1117, 1317, 1774
EcoRV GATATC 1 cut(s) 1456
EcoT14I CCWWGG 3 cut(s) 135, 939, 2171
ErhI CCWWGG 3 cut(s) 135, 939, 2171
Esp3I CGTCTC 1 cut(s) 373
FalI AAGNNNNNCTT 2 cut(s) 1442, 1474
FaqI GGGAC 4 cut(s) 18, 677, 2039, 2069
FauI CCCGC 1 cut(s) 6
FauNDI CATATG 2 cut(s) 1503, 2181
FbaI TGATCA 2 cut(s) 406, 1237
FblI GTMKAC 1 cut(s) 1132
FspBI CTAG 5 cut(s) 21, 486, 1001, 1086, 1202
GsuI CTGGAG 2 cut(s) 137, 558
HaeIII GGCC 5 cut(s) 19, 130, 181, 353, 403
HapII CCGG 6 cut(s) 8, 30, 175, 227, 354, 2087
HgaI GACGC 1 cut(s) 1298
HinfI GANTC 5 cut(s) 230, 612, 905, 1134, 1965
HpaII CCGG 6 cut(s) 8, 30, 175, 227, 354, 2087
HphI GGTGA 3 cut(s) 401, 875, 1096
Hpy166II GTNNAC 4 cut(s) 213, 703, 1133, 1653
Hpy188I TCNGA 8 cut(s) 126, 245, 373, 630, 1099, 1377, 1789, 2128
Hpy188III TCNNGA 7 cut(s) 391, 616, 933, 1228, 1241, 1343, 1548
Hpy8I GTNNAC 4 cut(s) 213, 703, 1133, 1653
Hpy99I CGWCG 3 cut(s) 209, 226, 1292
HpyAV CCTTC 9 cut(s) 613, 683, 787, 860, 946, 1104, 1205, 1281, 2029
HpyCH4III ACNGT 5 cut(s) 670, 1284, 1747, 1947, 2150
HpyCH4IV ACGT 2 cut(s) 168, 1912
HpyF10VI GCNNNNNNNGC 6 cut(s) 87, 689, 794, 1517, 1739, 2099
HpyF3I CTNAG 6 cut(s) 125, 424, 573, 1016, 1041, 1459
HpySE526I ACGT 2 cut(s) 168, 1912
KflI GGGWCCC 1 cut(s) 2053
KroI GCCGGC 1 cut(s) 174
KroNI GCCGGC 1 cut(s) 176
Ksp22I TGATCA 2 cut(s) 406, 1237
Kzo9I GATC 6 cut(s) 272, 406, 625, 997, 1237, 2184
LguI GCTCTTC 1 cut(s) 1563
LmnI GCTCC 2 cut(s) 689, 1550
LweI GCATC 4 cut(s) 120, 1002, 1411, 2000
MabI ACCWGGT 1 cut(s) 1774
MaeI CTAG 5 cut(s) 21, 486, 1001, 1086, 1202
MaeII ACGT 2 cut(s) 168, 1912
MaeIII GTNAC 4 cut(s) 25, 1022, 1462, 2033
MalI GATC 6 cut(s) 274, 408, 627, 999, 1239, 2186
MboI GATC 6 cut(s) 272, 406, 625, 997, 1237, 2184
MboII GAAGA 7 cut(s) 841, 844, 1021, 1411, 1550, 1863, 2130
MfeI CAATTG 3 cut(s) 524, 592, 2079
MhlI GDGCHC 1 cut(s) 390
MlyI GAGTC 2 cut(s) 1128, 1959
MmeI TCCRAC 3 cut(s) 455, 1130, 1557
MreI CGCCGGCG 1 cut(s) 174
MroNI GCCGGC 1 cut(s) 174
MroXI GAANNNNTTC 2 cut(s) 1093, 1194
MseI TTAA 4 cut(s) 552, 1332, 1349, 1814
MslI CAYNNNNRTG 2 cut(s) 1245, 1407
MspA1I CMGCKG 1 cut(s) 1760
MspI CCGG 6 cut(s) 8, 30, 175, 227, 354, 2087
MspR9I CCNGG 8 cut(s) 50, 155, 200, 516, 1119, 1319, 1776, 2087
MunI CAATTG 3 cut(s) 524, 592, 2079
Mva1269I GAATGC 2 cut(s) 1095, 1128
MvaI CCWGG 7 cut(s) 50, 155, 200, 516, 1119, 1319, 1776
MwoI GCNNNNNNNGC 6 cut(s) 87, 689, 794, 1517, 1739, 2099
NaeI GCCGGC 1 cut(s) 176
NciI CCSGG 1 cut(s) 2087
NcoI CCATGG 1 cut(s) 2171
NdeI CATATG 2 cut(s) 1503, 2181
NdeII GATC 6 cut(s) 272, 406, 625, 997, 1237, 2184
NgoMIV GCCGGC 1 cut(s) 174
NlaIV GGNNCC 6 cut(s) 6, 18, 937, 1444, 2054, 2055
NmeAIII GCCGAG 1 cut(s) 329
NmuCI GTSAC 4 cut(s) 25, 1022, 1462, 2033
NotI GCGGCCGC 1 cut(s) 179
NspI RCATGY 2 cut(s) 561, 701
NspV TTCGAA 1 cut(s) 417
PagI TCATGA 1 cut(s) 1240
PceI AGGCCT 1 cut(s) 403
PciI ACATGT 2 cut(s) 557, 697
PciSI GCTCTTC 1 cut(s) 1563
PcsI WCGNNNNNNNCGW 2 cut(s) 201, 1746
PctI GAATGC 2 cut(s) 1095, 1128
PdiI GCCGGC 1 cut(s) 176
PdmI GAANNNNTTC 2 cut(s) 1093, 1194
PfeI GAWTC 3 cut(s) 230, 612, 905
Pfl23II CGTACG 1 cut(s) 169
PflFI GACNNNGTC 1 cut(s) 668
PfoI TCCNGGA 1 cut(s) 1117
PinAI ACCGGT 1 cut(s) 7
Ple19I CGATCG 1 cut(s) 275
PleI GAGTC 2 cut(s) 1128, 1959
PpsI GAGTC 2 cut(s) 1128, 1959
Ppu21I YACGTR 1 cut(s) 169
PpuMI RGGWCCY 1 cut(s) 2053
PscI ACATGT 2 cut(s) 557, 697
Psp5II RGGWCCY 1 cut(s) 2053
Psp6I CCWGG 7 cut(s) 48, 153, 198, 514, 1117, 1317, 1774
PspGI CCWGG 7 cut(s) 48, 153, 198, 514, 1117, 1317, 1774
PspLI CGTACG 1 cut(s) 169
PspN4I GGNNCC 6 cut(s) 6, 18, 937, 1444, 2054, 2055
PspPI GGNCC 4 cut(s) 5, 17, 304, 2053
PspPPI RGGWCCY 1 cut(s) 2053
PstI CTGCAG 1 cut(s) 2112
PstNI CAGNNNCTG 1 cut(s) 124
PsyI GACNNNGTC 1 cut(s) 668
PvuI CGATCG 1 cut(s) 275
PvuII CAGCTG 1 cut(s) 1760
RsaI GTAC 8 cut(s) 76, 167, 171, 212, 510, 929, 1596, 1783
RsaNI GTAC 8 cut(s) 75, 166, 170, 211, 509, 928, 1595, 1782
RseI CAYNNNNRTG 2 cut(s) 1245, 1407
SapI GCTCTTC 1 cut(s) 1563
SaqAI TTAA 4 cut(s) 552, 1332, 1349, 1814
Sau3AI GATC 6 cut(s) 272, 406, 625, 997, 1237, 2184
Sau96I GGNCC 4 cut(s) 5, 17, 304, 2053
SchI GAGTC 2 cut(s) 1128, 1959
ScrFI CCNGG 8 cut(s) 50, 155, 200, 516, 1119, 1319, 1776, 2087
SduI GDGCHC 1 cut(s) 390
SexAI ACCWGGT 1 cut(s) 1774
SfaNI GCATC 4 cut(s) 120, 1002, 1411, 2000
SfcI CTRYAG 2 cut(s) 1986, 2108
SfuI TTCGAA 1 cut(s) 417
SgrAI CRCCGGYG 1 cut(s) 174
SinI GGWCC 3 cut(s) 5, 304, 2053
SmiMI CAYNNNNRTG 2 cut(s) 1245, 1407
SmlI CTYRAG 1 cut(s) 1228
SmoI CTYRAG 1 cut(s) 1228
SnaBI TACGTA 1 cut(s) 169
SpeI ACTAGT 1 cut(s) 1201
SseBI AGGCCT 1 cut(s) 403
SsiI CCGC 8 cut(s) 13, 105, 178, 182, 332, 512, 861, 1730
SspMI CTAG 5 cut(s) 21, 486, 1001, 1086, 1202
StuI AGGCCT 1 cut(s) 403
StyD4I CCNGG 8 cut(s) 48, 153, 198, 514, 1117, 1317, 1774, 2085
StyI CCWWGG 3 cut(s) 135, 939, 2171
TaaI ACNGT 5 cut(s) 670, 1284, 1747, 1947, 2150
TaiI ACGT 2 cut(s) 171, 1915
TatI WGTACW 3 cut(s) 210, 927, 1594
TauI GCSGC 4 cut(s) 107, 181, 184, 1733
TfiI GAWTC 3 cut(s) 230, 612, 905
Tru1I TTAA 4 cut(s) 552, 1332, 1349, 1814
Tru9I TTAA 4 cut(s) 552, 1332, 1349, 1814
TscAI CASTG 7 cut(s) 125, 220, 673, 756, 778, 1329, 1711
TseFI GTSAC 4 cut(s) 25, 1022, 1462, 2033
Tsp45I GTSAC 4 cut(s) 25, 1022, 1462, 2033
TspRI CASTG 7 cut(s) 125, 220, 673, 756, 778, 1329, 1711
Tth111I GACNNNGTC 1 cut(s) 668
VpaK11BI GGWCC 3 cut(s) 5, 304, 2053
XagI CCTNNNNNAGG 1 cut(s) 152
XapI RAATTY 4 cut(s) 519, 841, 1100, 1711
XceI RCATGY 2 cut(s) 561, 701
XmiI GTMKAC 1 cut(s) 1132
XmnI GAANNNNTTC 2 cut(s) 1093, 1194
XspI CTAG 5 cut(s) 21, 486, 1001, 1086, 1202
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.