Rw5G026210

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000157
Physical Location & Seq
Reverse (-)
37882669 .. 37886006
3338 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G026210.1

Sequence Viewer

Length: 1725 bp
ATGCAGCTAGTATCTGGCCGGGATATATCTGTTCAGTTGCAATACCGTAAGACACGTGTGGCCCTCTATAAGTATGCACTGAAAGGCGATTGGGAAGCCGCTGAACTAATCTTGAAAAAGAATAGCAGACTTCTGCAAGCTAGCATATCCAGAGGATATGAAACAGTCCTTCACGTTGCAGCAGGAACAAGCCATATTCACTTTGTGGAGAAACTGGTCAGCATGATGGAAGTAGAAGACTTGGCACTGCAGGACGTAAACGGAAACACTGCCTTGTGCATTGCTGCTTCGGCTGGATCTCTAGACATTGTCCAGATTTTGATACAAAAGAACAAGTCTTTGCTAACAATTAGAGGCGGTAAAGATATGGCGCCAGCCTATATGGCTGCTGTGTTTGGAAAGTCCGAAATGGCATGGTACCTGTACCGCGAAAGTAAAAAGATGTTGGAGAAAACCGACCAAGAAAACTTGTTCTTTTCTTGCATCAACAATTGTTTGTACGATTTGGCCTTTCAGTTGCTAGATGTTGATAAAGCATTAGCGAAGGCACGAACTAGTTCGCAGAAAAATAAAACGGCTTTGCATATCCTGGCTCGAAGACCTTCAGCATTTGGTGGCAGCCAAAGTCCACGAATGTGGACTAGACTCATTAACTCATTCCTCCCAGGTTTCAAGTTCGCATACAAAAGAAAGTTGAGAGAAGCTAATGGAGCTCTTCAACTAGTCCACCGCCTCTGGGAAGAAGTCTTGAGAGATGATGACCATGATGATGTGATGAGGCTGATCAAATATCCTTCAAATTTATTATTTGACGCAGCGGAATTAGGGAATTATGATTTTTTGGCAGCACTTTTGAGCTCTTATCCTGAGTTAGTATGGGAAACTGATGAAAAAAATCGAACCATAATCCATGTCGCAGTTCTGCATCGTCACGCGAGTATCTTCAATCTAGTGCATGAAATAGGCTCAATCAAAGATGTCATCGTGACATATGAAGATGATCAGGGTAACAACATTGTGCATATGGCTGCAAAATTGGCACCTCAAAATGAATTGAATCTCGTGTCAGGCGTAGCTCTTCAAATGCATCGAGAGTTGGTATGGTTTGAGGAAGTCAAAAAGATCGTCCAACCTCAATACATCGAAATGGAAAACAACAAAGGAAAAACACCTCAAGAATTATTTACTGAAGAGCATACGGCGTTAATGTGTCAAGGGGAAAAATGGATGAAGGACACTGCAACTTCATGCATGCTCGTTGCGACTATTATCGCAACCGTTGTGTTCTCAGCTGCATTTAGCATACCAGGTGGCACCGATGATCATACTGGAAAGCCAAATCTTTTGAAACAGAAAGCCTTTCTAGACTTTACCATAGCTGACGAAGTAGCACTCTTTTCCTCTTCAACTGCAATGTTGATGTTCTTGTTCATCCTTACCTCGCGGTATGCAGAAAATGATTTCCGCAAGTCTTTACCCTTGAAGTTGATGGTAGGACTCACTTGCCTCTTCATATCCATAGCAGCGATGATGATGGCTTTCAGCACCGCCTTCTATCTATCTTGTCAATACGAATCAAGATGGGTTTCAGATTTTACATTCTTATTTGCATTTGTCCCAGTTGCCTTGTTTGCGTTTATGCAATTCCCTCTCGTGTCCGACGTGTCCTCGTCTATATTTTGCTCAAGTCTACTATTTCAGCAGAGGAAATACATGCTCTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

574

Amino Acids

65.03

Weight (kDa)

6.93

Isoelectric Point (pI)

40.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 26 - 111 5.6e-10 Ankyrin repeats (3 copies)
Ank_2 PF12796 57 - 144 1.3e-09 Ankyrin repeats (3 copies)
PGG PF13962 407 - 520 2.4e-27 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 417
AccB1I GGYRCC 4 cut(s) 370, 417, 1039, 1313
AccI GTMKAC 1 cut(s) 1690
AccII CGCG 3 cut(s) 429, 935, 1444
AciI CCGC 8 cut(s) 99, 357, 427, 730, 818, 1444, 1465, 1548
AclWI GGATC 1 cut(s) 304
AcoI YGGCCR 1 cut(s) 16
AcsI RAATTY 1 cut(s) 799
AcuI CTGAAG 2 cut(s) 588, 1209
AcvI CACGTG 1 cut(s) 56
AcyI GRCGYC 1 cut(s) 371
AdeI CACNNNGTG 1 cut(s) 205
AfaI GTAC 3 cut(s) 419, 425, 500
AfiI CCNNNNNNNGG 1 cut(s) 736
AflIII ACRYGT 3 cut(s) 53, 55, 1662
AhlI ACTAGT 2 cut(s) 554, 721
AjiI CACGTC 1 cut(s) 1663
AjnI CCWGG 3 cut(s) 588, 664, 1306
AleI CACNNNNGTG 1 cut(s) 634
AluBI AGCT 8 cut(s) 7, 140, 704, 713, 858, 1076, 1292, 1379
AluI AGCT 8 cut(s) 7, 140, 704, 713, 858, 1076, 1292, 1379
Alw21I GWGCWC 2 cut(s) 715, 860
AlwI GGATC 1 cut(s) 304
AoxI GGCC 3 cut(s) 16, 60, 507
ApoI RAATTY 1 cut(s) 799
ArsI GACNNNNNNTTYG 2 cut(s) 1110, 1142
Asp700I GAANNNNTTC 2 cut(s) 556, 601
Asp718I GGTACC 1 cut(s) 417
AspLEI GCGC 1 cut(s) 373
AspS9I GGNCC 1 cut(s) 61
AsuC2I CCSGG 1 cut(s) 20
AsuNHI GCTAGC 1 cut(s) 140
BaeI ACNNNNGTAYC 2 cut(s) 922, 955
BanI GGYRCC 4 cut(s) 370, 417, 1039, 1313
BanII GRGCYC 2 cut(s) 715, 860
BauI CACGAG 2 cut(s) 1061, 1652
BbrPI CACGTG 1 cut(s) 56
BbsI GAAGAC 2 cut(s) 243, 604
Bbv12I GWGCWC 2 cut(s) 715, 860
BccI CCATC 4 cut(s) 220, 1483, 1528, 1575
BceAI ACGGC 2 cut(s) 591, 1215
BciT130I CCWGG 3 cut(s) 590, 666, 1308
BclI TGATCA 3 cut(s) 783, 1000, 1321
BcnI CCSGG 1 cut(s) 20
BcuI ACTAGT 2 cut(s) 554, 721
BfaI CTAG 9 cut(s) 8, 141, 302, 521, 555, 642, 722, 950, 1364
BfmI CTRYAG 1 cut(s) 248
BfoI RGCGCY 1 cut(s) 374
BglI GCCNNNNNGGC 1 cut(s) 383
Bme1390I CCNGG 4 cut(s) 20, 590, 666, 1308
BmgBI CACGTC 1 cut(s) 1663
BmgT120I GGNCC 1 cut(s) 61
BmiI GGNNCC 4 cut(s) 372, 419, 1041, 1315
BmrFI CCNGG 4 cut(s) 20, 590, 666, 1308
BmrI ACTGGG 1 cut(s) 1613
BmsI GCATC 3 cut(s) 492, 934, 1096
BmtI GCTAGC 1 cut(s) 144
BmuI ACTGGG 1 cut(s) 1613
BpiI GAAGAC 2 cut(s) 243, 604
BpuEI CTTGAG 3 cut(s) 769, 1158, 1669
BpuMI CCSGG 1 cut(s) 20
BsaAI YACGTR 1 cut(s) 56
BsaHI GRCGYC 1 cut(s) 371
BsaJI CCNNGG 1 cut(s) 664
Bsc4I CCNNNNNNNGG 1 cut(s) 736
Bse1I ACTGG 3 cut(s) 219, 1333, 1619
Bse3DI GCAATG 2 cut(s) 279, 1419
BseBI CCWGG 3 cut(s) 590, 666, 1308
BseDI CCNNGG 1 cut(s) 664
BseGI GGATG 2 cut(s) 1233, 1431
BseLI CCNNNNNNNGG 1 cut(s) 736
BseMI GCAATG 2 cut(s) 279, 1419
BseMII CTCAG 2 cut(s) 858, 1302
BseNI ACTGG 3 cut(s) 219, 1333, 1619
Bsh1236I CGCG 3 cut(s) 429, 935, 1444
BshFI GGCC 3 cut(s) 18, 62, 509
BshNI GGYRCC 4 cut(s) 370, 417, 1039, 1313
BsiHKAI GWGCWC 2 cut(s) 715, 860
BsiSI CCGG 1 cut(s) 19
BslFI GGGAC 1 cut(s) 1601
BslI CCNNNNNNNGG 1 cut(s) 736
BsmFI GGGAC 1 cut(s) 1601
BsnI GGCC 3 cut(s) 18, 62, 509
Bsp1286I GDGCHC 2 cut(s) 715, 860
Bsp143I GATC 5 cut(s) 296, 783, 1000, 1122, 1321
BspACI CCGC 8 cut(s) 99, 357, 427, 730, 818, 1444, 1465, 1548
BspANI GGCC 3 cut(s) 18, 62, 509
BspCNI CTCAG 2 cut(s) 859, 1301
BspFNI CGCG 3 cut(s) 429, 935, 1444
BspLI GGNNCC 4 cut(s) 372, 419, 1041, 1315
BspMAI CTGCAG 1 cut(s) 252
BspOI GCTAGC 1 cut(s) 144
BspPI GGATC 1 cut(s) 304
BspQI GCTCTTC 3 cut(s) 720, 1083, 1185
BspT107I GGYRCC 4 cut(s) 370, 417, 1039, 1313
BsrDI GCAATG 2 cut(s) 279, 1419
BsrI ACTGG 3 cut(s) 219, 1333, 1619
BssECI CCNNGG 1 cut(s) 664
BssMI GATC 5 cut(s) 296, 783, 1000, 1122, 1321
BssNI GRCGYC 1 cut(s) 371
BssSI CACGAG 2 cut(s) 1061, 1652
Bst2BI CACGAG 2 cut(s) 1061, 1652
Bst2UI CCWGG 3 cut(s) 590, 666, 1308
Bst4CI ACNGT 3 cut(s) 47, 166, 1279
Bst6I CTCTTC 5 cut(s) 720, 1083, 1185, 1408, 1514
BstACI GRCGYC 1 cut(s) 371
BstBAI YACGTR 1 cut(s) 56
BstC8I GCNNGC 4 cut(s) 138, 142, 375, 1253
BstDEI CTNAG 2 cut(s) 867, 1288
BstF5I GGATG 2 cut(s) 1233, 1431
BstFNI CGCG 3 cut(s) 429, 935, 1444
BstH2I RGCGCY 1 cut(s) 374
BstHHI GCGC 1 cut(s) 373
BstKTI GATC 5 cut(s) 299, 786, 1003, 1125, 1324
BstMBI GATC 5 cut(s) 296, 783, 1000, 1122, 1321
BstMWI GCNNNNNNNGC 5 cut(s) 290, 383, 710, 1037, 1631
BstNI CCWGG 3 cut(s) 590, 666, 1308
BstNSI RCATGY 2 cut(s) 1255, 1717
BstSCI CCNGG 4 cut(s) 18, 588, 664, 1306
BstSFI CTRYAG 1 cut(s) 248
BstUI CGCG 3 cut(s) 429, 935, 1444
BstV2I GAAGAC 2 cut(s) 243, 604
BstX2I RGATCY 1 cut(s) 296
BstXI CCANNNNNNTGG 1 cut(s) 636
BstYI RGATCY 1 cut(s) 296
BsuRI GGCC 3 cut(s) 18, 62, 509
BtgZI GCGATG 1 cut(s) 1541
BtrI CACGTC 1 cut(s) 1663
BtsCI GGATG 2 cut(s) 1233, 1431
BtsI GCAGTG 3 cut(s) 245, 267, 1236
BtsIMutI CAGTG 4 cut(s) 77, 245, 267, 1236
Cac8I GCNNGC 4 cut(s) 138, 142, 375, 1253
CfoI GCGC 1 cut(s) 373
Cfr13I GGNCC 1 cut(s) 61
CseI GACGC 1 cut(s) 821
CsiI ACCWGGT 1 cut(s) 1306
Csp6I GTAC 3 cut(s) 418, 424, 499
CviAII CATG 8 cut(s) 223, 414, 764, 911, 956, 1248, 1252, 1714
CviQI GTAC 3 cut(s) 418, 424, 499
DdeI CTNAG 2 cut(s) 867, 1288
DinI GGCGCC 1 cut(s) 372
DpnI GATC 5 cut(s) 298, 785, 1002, 1124, 1323
DpnII GATC 5 cut(s) 296, 783, 1000, 1122, 1321
DraIII CACNNNGTG 1 cut(s) 205
EaeI YGGCCR 1 cut(s) 16
Eam1104I CTCTTC 5 cut(s) 720, 1083, 1185, 1408, 1514
EarI CTCTTC 5 cut(s) 720, 1083, 1185, 1408, 1514
Ecl136II GAGCTC 2 cut(s) 713, 858
Eco24I GRGCYC 2 cut(s) 715, 860
Eco53kI GAGCTC 2 cut(s) 713, 858
Eco57I CTGAAG 2 cut(s) 588, 1209
Eco72I CACGTG 1 cut(s) 56
EcoICRI GAGCTC 2 cut(s) 713, 858
EcoRII CCWGG 3 cut(s) 588, 664, 1306
EcoT22I ATGCAT 2 cut(s) 1089, 1253
EcoT38I GRGCYC 2 cut(s) 715, 860
EgeI GGCGCC 1 cut(s) 372
EheI GGCGCC 1 cut(s) 372
FaeI CATG 8 cut(s) 226, 417, 767, 914, 959, 1251, 1255, 1717
FaqI GGGAC 1 cut(s) 1601
FatI CATG 8 cut(s) 222, 413, 763, 910, 955, 1247, 1251, 1713
FauNDI CATATG 2 cut(s) 991, 1023
FbaI TGATCA 3 cut(s) 783, 1000, 1321
FblI GTMKAC 1 cut(s) 1690
FokI GGATG 2 cut(s) 1240, 1418
FriOI GRGCYC 2 cut(s) 715, 860
FspBI CTAG 9 cut(s) 8, 141, 302, 521, 555, 642, 722, 950, 1364
GlaI GCGC 1 cut(s) 372
HaeII RGCGCY 1 cut(s) 374
HaeIII GGCC 3 cut(s) 18, 62, 509
HapII CCGG 1 cut(s) 19
HgaI GACGC 1 cut(s) 821
HhaI GCGC 1 cut(s) 373
Hin1I GRCGYC 1 cut(s) 371
Hin1II CATG 8 cut(s) 226, 417, 767, 914, 959, 1251, 1255, 1717
Hin6I GCGC 1 cut(s) 371
HinP1I GCGC 1 cut(s) 371
HinfI GANTC 4 cut(s) 645, 1057, 1497, 1574
HpaII CCGG 1 cut(s) 19
Hpy166II GTNNAC 5 cut(s) 259, 629, 639, 727, 1691
Hpy188I TCNGA 3 cut(s) 406, 1591, 1660
Hpy8I GTNNAC 5 cut(s) 259, 629, 639, 727, 1691
Hpy99I CGWCG 1 cut(s) 1664
HpyAV CCTTC 6 cut(s) 179, 538, 612, 804, 1225, 1561
HpyCH4III ACNGT 3 cut(s) 47, 166, 1279
HpyCH4IV ACGT 4 cut(s) 55, 174, 255, 1662
HpyF10VI GCNNNNNNNGC 5 cut(s) 290, 383, 710, 1037, 1631
HpyF3I CTNAG 2 cut(s) 867, 1288
HpySE526I ACGT 4 cut(s) 55, 174, 255, 1662
Hsp92I GRCGYC 1 cut(s) 371
Hsp92II CATG 8 cut(s) 226, 417, 767, 914, 959, 1251, 1255, 1717
HspAI GCGC 1 cut(s) 371
KasI GGCGCC 1 cut(s) 370
KpnI GGTACC 1 cut(s) 421
Ksp22I TGATCA 3 cut(s) 783, 1000, 1321
Kzo9I GATC 5 cut(s) 296, 783, 1000, 1122, 1321
LguI GCTCTTC 3 cut(s) 720, 1083, 1185
LmnI GCTCC 1 cut(s) 710
LweI GCATC 3 cut(s) 492, 934, 1096
MabI ACCWGGT 1 cut(s) 1306
MaeI CTAG 9 cut(s) 8, 141, 302, 521, 555, 642, 722, 950, 1364
MaeII ACGT 4 cut(s) 55, 174, 255, 1662
MaeIII GTNAC 3 cut(s) 929, 985, 1007
MalI GATC 5 cut(s) 298, 785, 1002, 1124, 1323
MboI GATC 5 cut(s) 296, 783, 1000, 1122, 1321
MfeI CAATTG 1 cut(s) 490
MflI RGATCY 1 cut(s) 296
MhlI GDGCHC 2 cut(s) 715, 860
MluCI AATT 9 cut(s) 348, 490, 799, 821, 829, 1034, 1052, 1178, 1643
Mly113I GGCGCC 1 cut(s) 371
MlyI GAGTC 2 cut(s) 639, 1491
MmeI TCCRAC 3 cut(s) 426, 1153, 1683
Mph1103I ATGCAT 2 cut(s) 1089, 1253
MroXI GAANNNNTTC 2 cut(s) 556, 601
MseI TTAA 2 cut(s) 651, 1205
MslI CAYNNNNRTG 3 cut(s) 634, 768, 1145
MspA1I CMGCKG 3 cut(s) 101, 818, 1292
MspI CCGG 1 cut(s) 19
MspR9I CCNGG 4 cut(s) 20, 590, 666, 1308
MunI CAATTG 1 cut(s) 490
MvaI CCWGG 3 cut(s) 590, 666, 1308
MvnI CGCG 3 cut(s) 429, 935, 1444
MwoI GCNNNNNNNGC 5 cut(s) 290, 383, 710, 1037, 1631
NarI GGCGCC 1 cut(s) 371
NciI CCSGG 1 cut(s) 20
NdeI CATATG 2 cut(s) 991, 1023
NdeII GATC 5 cut(s) 296, 783, 1000, 1122, 1321
NheI GCTAGC 1 cut(s) 140
NlaIII CATG 8 cut(s) 226, 417, 767, 914, 959, 1251, 1255, 1717
NlaIV GGNNCC 4 cut(s) 372, 419, 1041, 1315
NmuCI GTSAC 2 cut(s) 929, 985
NsiI ATGCAT 2 cut(s) 1089, 1253
NspI RCATGY 2 cut(s) 1255, 1717
OliI CACNNNNGTG 1 cut(s) 634
PaeI GCATGC 1 cut(s) 1255
PciSI GCTCTTC 3 cut(s) 720, 1083, 1185
PcsI WCGNNNNNNNCGW 2 cut(s) 1068, 1659
PdmI GAANNNNTTC 2 cut(s) 556, 601
PfeI GAWTC 2 cut(s) 1057, 1574
PflFI GACNNNGTC 1 cut(s) 308
PleI GAGTC 2 cut(s) 639, 1491
PluTI GGCGCC 1 cut(s) 374
PmaCI CACGTG 1 cut(s) 56
PmlI CACGTG 1 cut(s) 56
PpsI GAGTC 2 cut(s) 639, 1491
Ppu21I YACGTR 1 cut(s) 56
Psp124BI GAGCTC 2 cut(s) 715, 860
Psp6I CCWGG 3 cut(s) 588, 664, 1306
PspCI CACGTG 1 cut(s) 56
PspGI CCWGG 3 cut(s) 588, 664, 1306
PspN4I GGNNCC 4 cut(s) 372, 419, 1041, 1315
PspPI GGNCC 1 cut(s) 61
PstI CTGCAG 1 cut(s) 252
PsuI RGATCY 1 cut(s) 296
PsyI GACNNNGTC 1 cut(s) 308
PvuII CAGCTG 1 cut(s) 1292
RsaI GTAC 3 cut(s) 419, 425, 500
RsaNI GTAC 3 cut(s) 418, 424, 499
RseI CAYNNNNRTG 3 cut(s) 634, 768, 1145
SacI GAGCTC 2 cut(s) 715, 860
SapI GCTCTTC 3 cut(s) 720, 1083, 1185
SaqAI TTAA 2 cut(s) 651, 1205
Sau3AI GATC 5 cut(s) 296, 783, 1000, 1122, 1321
Sau96I GGNCC 1 cut(s) 61
SchI GAGTC 2 cut(s) 639, 1491
ScrFI CCNGG 4 cut(s) 20, 590, 666, 1308
SduI GDGCHC 2 cut(s) 715, 860
SexAI ACCWGGT 1 cut(s) 1306
SfaNI GCATC 3 cut(s) 492, 934, 1096
SfcI CTRYAG 1 cut(s) 248
SfoI GGCGCC 1 cut(s) 372
SmiMI CAYNNNNRTG 3 cut(s) 634, 768, 1145
SmlI CTYRAG 3 cut(s) 748, 1173, 1684
SmoI CTYRAG 3 cut(s) 748, 1173, 1684
SpeI ACTAGT 2 cut(s) 554, 721
SphI GCATGC 1 cut(s) 1255
Sse9I AATT 9 cut(s) 348, 490, 799, 821, 829, 1034, 1052, 1178, 1643
SsiI CCGC 8 cut(s) 99, 357, 427, 730, 818, 1444, 1465, 1548
SspDI GGCGCC 1 cut(s) 370
SspMI CTAG 9 cut(s) 8, 141, 302, 521, 555, 642, 722, 950, 1364
SstI GAGCTC 2 cut(s) 715, 860
StyD4I CCNGG 4 cut(s) 18, 588, 664, 1306
TaaI ACNGT 3 cut(s) 47, 166, 1279
TaiI ACGT 4 cut(s) 58, 177, 258, 1665
TaqI TCGA 4 cut(s) 595, 898, 1090, 1143
TasI AATT 9 cut(s) 348, 490, 799, 821, 829, 1034, 1052, 1178, 1643
TauI GCSGC 1 cut(s) 101
TfiI GAWTC 2 cut(s) 1057, 1574
Tru1I TTAA 2 cut(s) 651, 1205
Tru9I TTAA 2 cut(s) 651, 1205
TscAI CASTG 4 cut(s) 84, 252, 274, 1243
TseFI GTSAC 2 cut(s) 929, 985
Tsp45I GTSAC 2 cut(s) 929, 985
TspDTI ATGAA 9 cut(s) 174, 903, 972, 1008, 1065, 1236, 1244, 1420, 1501
TspGWI ACGGA 1 cut(s) 276
TspRI CASTG 4 cut(s) 84, 252, 274, 1243
Tth111I GACNNNGTC 1 cut(s) 308
XapI RAATTY 1 cut(s) 799
XbaI TCTAGA 2 cut(s) 301, 1363
XceI RCATGY 2 cut(s) 1255, 1717
XmiI GTMKAC 1 cut(s) 1690
XmnI GAANNNNTTC 2 cut(s) 556, 601
XspI CTAG 9 cut(s) 8, 141, 302, 521, 555, 642, 722, 950, 1364
Zsp2I ATGCAT 2 cut(s) 1089, 1253
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.