Rmu_sc0003677.1_g000003

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003677.1
OG0000157
Physical Location & Seq
Forward (+)
11712 .. 16434
4723 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003677.1_g000003.1.cds

Sequence Viewer

Length: 2202 bp
atgggattgtggaagccactctcactcgatctactcttcccttccgttcgtcgttctctcatcattctcaacctgcaattcaacgtcaacccatctattacttcatttccacacccctatggcggcgccgttactagccacccaaccaaacacagctcccatgcagactgggtgatggaaaacctcagaaaggatcccaaatttgagccctcagcagtgcgattctctctccacacccaccaatcggaccagctgaggctagaggcacgtttgcgaccagaagacgaatcgaacccaacaagtgagccggccggaggtggcctgacagcggagtggaggttcaatttggaactattgtctggcccacaagcacacaattctgtaccgcctggaattcaattgatggctactggtaatggagatccaatggcaagtgcagatactgccatcaacattcactcgatacattcgcatcgttttctagaaaacaacaatagagagctataccttaatacatgtgtgccactctctaagtatgcactaaaaggcaattgggaagctgctgaacgaatcttgaaggaggatccgagtcttttgacttctagcataacaagaggggaggacactgtccttcacattgcagcaggagcaagacatgttcgctttgtggagaagctggtcgaaatgatggaagaactgaatggaaacgagacatgttcacaaaacttggcactgaaagacatgaatggaaacactgccttcagcattgctgctgcagctggaagtattgaaattgcagagattttgatcaagaagaataaggatttgcgaataattcgaggtggtgcaggaatgacaccactctatatggctgccttgttgggacagtctgtaatggcagataacctgtactctgaaaccaaggaaatgttggaggaattcgaccgccaagcgttgttttttacttgtatcgataatggtctgtacgatctagctttgaagattctaagaagtgacagagcattagctaaggcttgtaatgcaaaagaggaaacagctttgcatatcttggctagaacgccttcagacttcaccagccaaagtccaggaacgtggagtagactcatcaactcatttatcccagattggaatttctcatacaatagaaacttgaaacaagtcaatgaagcccttcaactagtccaatgcctttggacagaaatcttgagaaatgatcatgacgatgtgatgagactaatcaaacatccttcaagattactgttcgacgctgcaaaattaggaaattatgagttcctggcagtgctcattaactcttatcctgacttaatatgggaacttgatgacaaaaatcggagtataatccatgttgctgttttgcatcgtcatgcaagtatcttcaatttagtgcatgagataggttccatcaaggatatcatagtgacatttcctgatgatgaagagagtaataacattttacatttggctgcaaaattagcacctccaaatcaactcaaccttgtatcaggagcagctcttcaaatgcagcgagagttggtatggtttgaggaagtgaaaaagattgtacaacctaagtccatagagatgaaaaacaagaaaggagaaacaccacgagaattgttcacaagtgagcatgaagggttgttacacaaaggagaagcatggatgaaggacactgcaagttcatgcatgattgttgcggctcttatcgcagctgttgtgttttcagctgcatttagcgtacctggtggtacatctgataatacaggacagccaaactttctaaaagagactgctttcctattctttgccatagcagatggagtagcactcgtttcctcttcaacttcaatactgatgttcttgttcatcctcacatcgcgttacgctgaaggtgatttcctcaaatcgttaccgttgaagttgatgattggactcgcatcacttttcatatctatagtatccatgatggtagcttttagcgcaaccatctatttagactgtcactatggattaggatgggtcccaaatcttatatttgtatttgcatttgtcccggttgctttgtttgcttttctgcagtttcctctcttgtctgatatgttttcttctacatattgttcaagtcttttatttcagccatggaaacatatgatcgagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

733

Amino Acids

81.76

Weight (kDa)

5.85

Isoelectric Point (pI)

40.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 81
AccB1I GGYRCC 1 cut(s) 125
AccI GTMKAC 1 cut(s) 1120
AccII CGCG 1 cut(s) 1921
AciI CCGC 5 cut(s) 123, 329, 386, 946, 1739
AclWI GGATC 5 cut(s) 188, 201, 416, 578, 591
AcoI YGGCCR 1 cut(s) 309
AcsI RAATTY 4 cut(s) 200, 393, 938, 1150
AcuI CTGAAG 3 cut(s) 745, 1068, 1950
AcyI GRCGYC 1 cut(s) 126
AfaI GTAC 6 cut(s) 384, 911, 986, 1605, 1782, 1792
AfiI CCNNNNNNNGG 5 cut(s) 122, 190, 244, 314, 328
AflIII ACRYGT 3 cut(s) 515, 655, 713
AhlI ACTAGT 1 cut(s) 1198
AjnI CCWGG 4 cut(s) 388, 1105, 1314, 1783
AloI GAACNNNNNNTCC 2 cut(s) 323, 355
Alw21I GWGCWC 1 cut(s) 1326
Alw26I GTCTC 3 cut(s) 704, 1246, 1823
AlwI GGATC 5 cut(s) 188, 201, 416, 578, 591
AlwNI CAGNNNCTG 1 cut(s) 443
AoxI GGCC 3 cut(s) 309, 319, 361
ApoI RAATTY 4 cut(s) 200, 393, 938, 1150
Asp700I GAANNNNTTC 2 cut(s) 1081, 1191
AspLEI GCGC 2 cut(s) 128, 2024
AspS9I GGNCC 3 cut(s) 247, 362, 2062
AsuC2I CCSGG 1 cut(s) 2096
AsuHPI GGTGA 3 cut(s) 184, 1084, 1946
AvaII GGWCC 2 cut(s) 247, 2062
BamHI GGATCC 2 cut(s) 193, 583
BanI GGYRCC 1 cut(s) 125
BanII GRGCYC 1 cut(s) 210
BarI GAAGNNNNNNTAC 2 cut(s) 1668, 1700
BauI CACGAG 1 cut(s) 1650
BbsI GAAGAC 1 cut(s) 288
Bbv12I GWGCWC 1 cut(s) 1326
BbvCI CCTCAGC 2 cut(s) 211, 254
BceAI ACGGC 1 cut(s) 113
BciT130I CCWGG 4 cut(s) 390, 1107, 1316, 1785
BciVI GTATCC 1 cut(s) 2011
BclI TGATCA 2 cut(s) 807, 1234
BcnI CCSGG 1 cut(s) 2096
BcoDI GTCTC 3 cut(s) 704, 1246, 1823
BcuI ACTAGT 1 cut(s) 1198
BfaI CTAG 7 cut(s) 135, 260, 482, 603, 992, 1074, 1199
BfmI CTRYAG 3 cut(s) 774, 1995, 2117
BfoI RGCGCY 1 cut(s) 129
BfuAI ACCTGC 1 cut(s) 81
BfuI GTATCC 1 cut(s) 2011
Bme1390I CCNGG 5 cut(s) 390, 1107, 1316, 1785, 2096
Bme18I GGWCC 2 cut(s) 247, 2062
BmgT120I GGNCC 3 cut(s) 247, 362, 2062
BmiI GGNNCC 6 cut(s) 127, 195, 585, 1441, 2063, 2064
BmrFI CCNGG 5 cut(s) 390, 1107, 1316, 1785, 2096
BmrI ACTGGG 1 cut(s) 178
BmsI GCATC 3 cut(s) 481, 1408, 1988
BmuI ACTGGG 1 cut(s) 178
BpiI GAAGAC 1 cut(s) 288
BplI GAGNNNNNCTC 2 cut(s) 1854, 1886
Bpu10I CCTNAGC 3 cut(s) 211, 254, 1029
BpuEI CTTGAG 1 cut(s) 1246
BpuMI CCSGG 1 cut(s) 2096
Bsa29I ATCGAT 1 cut(s) 972
BsaBI GATNNNNATC 1 cut(s) 806
BsaHI GRCGYC 1 cut(s) 126
BsaJI CCNNGG 2 cut(s) 921, 2180
BsaXI ACNNNNNCTCC 2 cut(s) 323, 353
Bsc4I CCNNNNNNNGG 5 cut(s) 122, 190, 244, 314, 328
Bse118I RCCGGY 1 cut(s) 307
Bse1I ACTGG 2 cut(s) 173, 415
Bse3DI GCAATG 2 cut(s) 636, 765
Bse8I GATNNNNATC 1 cut(s) 806
BseBI CCWGG 4 cut(s) 390, 1107, 1316, 1785
BseCI ATCGAT 1 cut(s) 972
BseDI CCNNGG 2 cut(s) 921, 2180
BseGI GGATG 4 cut(s) 1264, 1710, 1908, 2063
BseJI GATNNNNATC 1 cut(s) 806
BseLI CCNNNNNNNGG 5 cut(s) 122, 190, 244, 314, 328
BseMI GCAATG 2 cut(s) 636, 765
BseMII CTCAG 3 cut(s) 199, 225, 245
BseNI ACTGG 2 cut(s) 173, 415
BseX3I CGGCCG 1 cut(s) 309
BsgI GTGCAG 2 cut(s) 456, 867
Bsh1236I CGCG 1 cut(s) 1921
Bsh1285I CGRYCG 2 cut(s) 312, 946
BshFI GGCC 3 cut(s) 311, 321, 363
BshNI GGYRCC 1 cut(s) 125
BshVI ATCGAT 1 cut(s) 972
BsiEI CGRYCG 2 cut(s) 312, 946
BsiHKAI GWGCWC 1 cut(s) 1326
BsiSI CCGG 3 cut(s) 308, 312, 2096
BslFI GGGAC 3 cut(s) 897, 2048, 2078
BslI CCNNNNNNNGG 5 cut(s) 122, 190, 244, 314, 328
BsmAI GTCTC 3 cut(s) 704, 1246, 1823
BsmFI GGGAC 3 cut(s) 897, 2048, 2078
BsnI GGCC 3 cut(s) 311, 321, 363
Bsp1286I GDGCHC 2 cut(s) 210, 1326
Bsp1407I TGTACA 1 cut(s) 1603
Bsp143I GATC 8 cut(s) 28, 193, 421, 583, 807, 988, 1234, 2193
Bsp19I CCATGG 1 cut(s) 2180
BspACI CCGC 5 cut(s) 123, 329, 386, 946, 1739
BspANI GGCC 3 cut(s) 311, 321, 363
BspCNI CTCAG 3 cut(s) 198, 224, 246
BspDI ATCGAT 1 cut(s) 972
BspFNI CGCG 1 cut(s) 1921
BspHI TCATGA 1 cut(s) 1237
BspLI GGNNCC 6 cut(s) 127, 195, 585, 1441, 2063, 2064
BspMAI CTGCAG 2 cut(s) 778, 2121
BspMI ACCTGC 1 cut(s) 81
BspPI GGATC 5 cut(s) 188, 201, 416, 578, 591
BspQI GCTCTTC 1 cut(s) 1560
BspT107I GGYRCC 1 cut(s) 125
BsrDI GCAATG 2 cut(s) 636, 765
BsrFI RCCGGY 1 cut(s) 307
BsrGI TGTACA 1 cut(s) 1603
BsrI ACTGG 2 cut(s) 173, 415
BssAI RCCGGY 1 cut(s) 307
BssECI CCNNGG 2 cut(s) 921, 2180
BssMI GATC 8 cut(s) 28, 193, 421, 583, 807, 988, 1234, 2193
BssNI GRCGYC 1 cut(s) 126
BssSI CACGAG 1 cut(s) 1650
BssT1I CCWWGG 2 cut(s) 921, 2180
Bst2BI CACGAG 1 cut(s) 1650
Bst2UI CCWGG 4 cut(s) 390, 1107, 1316, 1785
Bst4CI ACNGT 5 cut(s) 628, 888, 1281, 1956, 2042
Bst6I CTCTTC 4 cut(s) 41, 1473, 1560, 1885
BstACI GRCGYC 1 cut(s) 126
BstAPI GCANNNNNTGC 1 cut(s) 443
BstAUI TGTACA 1 cut(s) 1603
BstC8I GCNNGC 1 cut(s) 309
BstDEI CTNAG 7 cut(s) 185, 211, 254, 531, 1007, 1029, 1611
BstDSI CCRYGG 1 cut(s) 2180
BstENI CCTNNNNNAGG 1 cut(s) 188
BstF5I GGATG 4 cut(s) 1264, 1710, 1908, 2063
BstFNI CGCG 1 cut(s) 1921
BstH2I RGCGCY 1 cut(s) 129
BstHHI GCGC 2 cut(s) 128, 2024
BstKTI GATC 8 cut(s) 31, 196, 424, 586, 810, 991, 1237, 2196
BstMAI GTCTC 3 cut(s) 704, 1246, 1823
BstMBI GATC 8 cut(s) 28, 193, 421, 583, 807, 988, 1234, 2193
BstMCI CGRYCG 2 cut(s) 312, 946
BstMWI GCNNNNNNNGC 8 cut(s) 443, 647, 776, 1040, 1514, 1748, 2021, 2108
BstNI CCWGG 4 cut(s) 390, 1107, 1316, 1785
BstNSI RCATGY 3 cut(s) 519, 659, 717
BstSCI CCNGG 5 cut(s) 388, 1105, 1314, 1783, 2094
BstSFI CTRYAG 3 cut(s) 774, 1995, 2117
BstUI CGCG 1 cut(s) 1921
BstV2I GAAGAC 1 cut(s) 288
BstX2I RGATCY 3 cut(s) 193, 421, 583
BstXI CCANNNNNNTGG 1 cut(s) 1113
BstYI RGATCY 3 cut(s) 193, 421, 583
BstZI CGGCCG 1 cut(s) 309
Bsu15I ATCGAT 1 cut(s) 972
BsuI GTATCC 1 cut(s) 2011
BsuRI GGCC 3 cut(s) 311, 321, 363
BsuTUI ATCGAT 1 cut(s) 972
BtgI CCRYGG 1 cut(s) 2180
BtgZI GCGATG 1 cut(s) 1902
BtsCI GGATG 4 cut(s) 1264, 1710, 1908, 2063
BtsI GCAGTG 4 cut(s) 222, 753, 1326, 1713
BtsIMutI CAGTG 6 cut(s) 222, 624, 731, 753, 1326, 1713
BveI ACCTGC 1 cut(s) 81
Cac8I GCNNGC 1 cut(s) 309
CaiI CAGNNNCTG 1 cut(s) 443
CciI TCATGA 1 cut(s) 1237
CfoI GCGC 2 cut(s) 128, 2024
Cfr10I RCCGGY 1 cut(s) 307
Cfr13I GGNCC 3 cut(s) 247, 362, 2062
ClaI ATCGAT 1 cut(s) 972
CseI GACGC 1 cut(s) 1295
CsiI ACCWGGT 1 cut(s) 1783
Csp6I GTAC 6 cut(s) 383, 910, 985, 1604, 1781, 1791
CspCI CAANNNNNGTGG 2 cut(s) 1638, 1673
CviQI GTAC 6 cut(s) 383, 910, 985, 1604, 1781, 1791
DdeI CTNAG 7 cut(s) 185, 211, 254, 531, 1007, 1029, 1611
DinI GGCGCC 1 cut(s) 127
DpnI GATC 8 cut(s) 30, 195, 423, 585, 809, 990, 1236, 2195
DpnII GATC 8 cut(s) 28, 193, 421, 583, 807, 988, 1234, 2193
EaeI YGGCCR 1 cut(s) 309
EagI CGGCCG 1 cut(s) 309
Eam1104I CTCTTC 4 cut(s) 41, 1473, 1560, 1885
EarI CTCTTC 4 cut(s) 41, 1473, 1560, 1885
EclXI CGGCCG 1 cut(s) 309
Eco130I CCWWGG 2 cut(s) 921, 2180
Eco24I GRGCYC 1 cut(s) 210
Eco32I GATATC 1 cut(s) 1453
Eco47I GGWCC 2 cut(s) 247, 2062
Eco52I CGGCCG 1 cut(s) 309
Eco57I CTGAAG 3 cut(s) 745, 1068, 1950
EcoNI CCTNNNNNAGG 1 cut(s) 188
EcoO109I RGGNCCY 1 cut(s) 2062
EcoRI GAATTC 2 cut(s) 393, 938
EcoRII CCWGG 4 cut(s) 388, 1105, 1314, 1783
EcoRV GATATC 1 cut(s) 1453
EcoT14I CCWWGG 2 cut(s) 921, 2180
EcoT22I ATGCAT 1 cut(s) 1730
EcoT38I GRGCYC 1 cut(s) 210
EgeI GGCGCC 1 cut(s) 127
EheI GGCGCC 1 cut(s) 127
ErhI CCWWGG 2 cut(s) 921, 2180
FaqI GGGAC 3 cut(s) 897, 2048, 2078
FauNDI CATATG 1 cut(s) 2190
FbaI TGATCA 2 cut(s) 807, 1234
FblI GTMKAC 1 cut(s) 1120
FokI GGATG 4 cut(s) 1251, 1717, 1895, 2070
FriOI GRGCYC 1 cut(s) 210
FspBI CTAG 7 cut(s) 135, 260, 482, 603, 992, 1074, 1199
GlaI GCGC 2 cut(s) 127, 2023
HaeII RGCGCY 1 cut(s) 129
HaeIII GGCC 3 cut(s) 311, 321, 363
HapII CCGG 3 cut(s) 308, 312, 2096
HgaI GACGC 1 cut(s) 1295
HhaI GCGC 2 cut(s) 128, 2024
Hin1I GRCGYC 1 cut(s) 126
Hin6I GCGC 2 cut(s) 126, 2022
HinP1I GCGC 2 cut(s) 126, 2022
HincII GTYRAC 1 cut(s) 88
HindII GTYRAC 1 cut(s) 88
HinfI GANTC 7 cut(s) 222, 287, 570, 589, 1003, 1122, 1974
HpaII CCGG 3 cut(s) 308, 312, 2096
HphI GGTGA 3 cut(s) 184, 1084, 1946
Hpy166II GTNNAC 4 cut(s) 88, 719, 1121, 1662
Hpy188I TCNGA 8 cut(s) 188, 247, 588, 916, 1087, 1374, 1798, 2137
Hpy188III TCNNGA 9 cut(s) 482, 574, 811, 1225, 1238, 1272, 1340, 1469, 1545
Hpy8I GTNNAC 4 cut(s) 88, 719, 1121, 1662
Hpy99I CGWCG 2 cut(s) 54, 1289
HpyCH4III ACNGT 5 cut(s) 628, 888, 1281, 1956, 2042
HpyCH4IV ACGT 3 cut(s) 84, 268, 1112
HpyF10VI GCNNNNNNNGC 8 cut(s) 443, 647, 776, 1040, 1514, 1748, 2021, 2108
HpyF3I CTNAG 7 cut(s) 185, 211, 254, 531, 1007, 1029, 1611
HpySE526I ACGT 3 cut(s) 84, 268, 1112
Hsp92I GRCGYC 1 cut(s) 126
HspAI GCGC 2 cut(s) 126, 2022
KasI GGCGCC 1 cut(s) 125
KflI GGGWCCC 1 cut(s) 2062
KroI GCCGGC 1 cut(s) 307
KroNI GCCGGC 1 cut(s) 309
Ksp22I TGATCA 2 cut(s) 807, 1234
Kzo9I GATC 8 cut(s) 28, 193, 421, 583, 807, 988, 1234, 2193
LguI GCTCTTC 1 cut(s) 1560
LmnI GCTCC 3 cut(s) 161, 647, 1547
LweI GCATC 3 cut(s) 481, 1408, 1988
MabI ACCWGGT 1 cut(s) 1783
MaeI CTAG 7 cut(s) 135, 260, 482, 603, 992, 1074, 1199
MaeII ACGT 3 cut(s) 84, 268, 1112
MaeIII GTNAC 7 cut(s) 130, 1013, 1459, 1683, 1922, 1950, 2042
MalI GATC 8 cut(s) 30, 195, 423, 585, 809, 990, 1236, 2195
MboI GATC 8 cut(s) 28, 193, 421, 583, 807, 988, 1234, 2193
MfeI CAATTG 2 cut(s) 398, 550
MflI RGATCY 3 cut(s) 193, 421, 583
MhlI GDGCHC 2 cut(s) 210, 1326
Mly113I GGCGCC 1 cut(s) 126
MlyI GAGTC 3 cut(s) 598, 1116, 1968
MmeI TCCRAC 1 cut(s) 912
Mph1103I ATGCAT 1 cut(s) 1730
MroNI GCCGGC 1 cut(s) 307
MroXI GAANNNNTTC 2 cut(s) 1081, 1191
MseI TTAA 3 cut(s) 510, 1329, 1346
MslI CAYNNNNRTG 4 cut(s) 117, 1242, 1404, 1622
MspA1I CMGCKG 5 cut(s) 253, 329, 779, 1754, 1769
MspI CCGG 3 cut(s) 308, 312, 2096
MspR9I CCNGG 5 cut(s) 390, 1107, 1316, 1785, 2096
MunI CAATTG 2 cut(s) 398, 550
MvaI CCWGG 4 cut(s) 390, 1107, 1316, 1785
MvnI CGCG 1 cut(s) 1921
MwoI GCNNNNNNNGC 8 cut(s) 443, 647, 776, 1040, 1514, 1748, 2021, 2108
NaeI GCCGGC 1 cut(s) 309
NarI GGCGCC 1 cut(s) 126
NciI CCSGG 1 cut(s) 2096
NcoI CCATGG 1 cut(s) 2180
NdeI CATATG 1 cut(s) 2190
NdeII GATC 8 cut(s) 28, 193, 421, 583, 807, 988, 1234, 2193
NgoMIV GCCGGC 1 cut(s) 307
NlaIV GGNNCC 6 cut(s) 127, 195, 585, 1441, 2063, 2064
NmuCI GTSAC 3 cut(s) 1013, 1459, 2042
NsiI ATGCAT 1 cut(s) 1730
NspI RCATGY 3 cut(s) 519, 659, 717
PagI TCATGA 1 cut(s) 1237
PciI ACATGT 3 cut(s) 515, 655, 713
PciSI GCTCTTC 1 cut(s) 1560
PdiI GCCGGC 1 cut(s) 309
PdmI GAANNNNTTC 2 cut(s) 1081, 1191
PfeI GAWTC 4 cut(s) 222, 287, 570, 1003
PflFI GACNNNGTC 1 cut(s) 626
PfoI TCCNGGA 1 cut(s) 1105
PleI GAGTC 3 cut(s) 597, 1116, 1968
PluTI GGCGCC 1 cut(s) 129
PpsI GAGTC 3 cut(s) 597, 1116, 1968
PpuMI RGGWCCY 1 cut(s) 2062
PscI ACATGT 3 cut(s) 515, 655, 713
Psp5II RGGWCCY 1 cut(s) 2062
Psp6I CCWGG 4 cut(s) 388, 1105, 1314, 1783
PspGI CCWGG 4 cut(s) 388, 1105, 1314, 1783
PspN4I GGNNCC 6 cut(s) 127, 195, 585, 1441, 2063, 2064
PspPI GGNCC 3 cut(s) 247, 362, 2062
PspPPI RGGWCCY 1 cut(s) 2062
PstI CTGCAG 2 cut(s) 778, 2121
PstNI CAGNNNCTG 1 cut(s) 443
PsuI RGATCY 3 cut(s) 193, 421, 583
PsyI GACNNNGTC 1 cut(s) 626
PvuII CAGCTG 4 cut(s) 253, 779, 1754, 1769
RsaI GTAC 6 cut(s) 384, 911, 986, 1605, 1782, 1792
RsaNI GTAC 6 cut(s) 383, 910, 985, 1604, 1781, 1791
RseI CAYNNNNRTG 4 cut(s) 117, 1242, 1404, 1622
SapI GCTCTTC 1 cut(s) 1560
SaqAI TTAA 3 cut(s) 510, 1329, 1346
Sau3AI GATC 8 cut(s) 28, 193, 421, 583, 807, 988, 1234, 2193
Sau96I GGNCC 3 cut(s) 247, 362, 2062
SchI GAGTC 3 cut(s) 598, 1116, 1968
ScrFI CCNGG 5 cut(s) 390, 1107, 1316, 1785, 2096
SduI GDGCHC 2 cut(s) 210, 1326
SexAI ACCWGGT 1 cut(s) 1783
SfaNI GCATC 3 cut(s) 481, 1408, 1988
SfcI CTRYAG 3 cut(s) 774, 1995, 2117
SfoI GGCGCC 1 cut(s) 127
SinI GGWCC 2 cut(s) 247, 2062
SmiMI CAYNNNNRTG 4 cut(s) 117, 1242, 1404, 1622
SmlI CTYRAG 1 cut(s) 1225
SmoI CTYRAG 1 cut(s) 1225
SpeI ACTAGT 1 cut(s) 1198
SsiI CCGC 5 cut(s) 123, 329, 386, 946, 1739
SspDI GGCGCC 1 cut(s) 125
SspMI CTAG 7 cut(s) 135, 260, 482, 603, 992, 1074, 1199
StyD4I CCNGG 5 cut(s) 388, 1105, 1314, 1783, 2094
StyI CCWWGG 2 cut(s) 921, 2180
TaaI ACNGT 5 cut(s) 628, 888, 1281, 1956, 2042
TaiI ACGT 3 cut(s) 87, 271, 1115
TaqI TCGA 9 cut(s) 27, 290, 461, 681, 838, 942, 972, 1284, 2196
TatI WGTACW 2 cut(s) 909, 1603
TauI GCSGC 2 cut(s) 126, 1742
TfiI GAWTC 4 cut(s) 222, 287, 570, 1003
Tru1I TTAA 3 cut(s) 510, 1329, 1346
Tru9I TTAA 3 cut(s) 510, 1329, 1346
TscAI CASTG 6 cut(s) 222, 631, 738, 760, 1326, 1720
TseFI GTSAC 3 cut(s) 1013, 1459, 2042
Tsp45I GTSAC 3 cut(s) 1013, 1459, 2042
TspGWI ACGGA 1 cut(s) 34
TspRI CASTG 6 cut(s) 222, 631, 738, 760, 1326, 1720
Tth111I GACNNNGTC 1 cut(s) 626
VpaK11BI GGWCC 2 cut(s) 247, 2062
XagI CCTNNNNNAGG 1 cut(s) 188
XapI RAATTY 4 cut(s) 200, 393, 938, 1150
XbaI TCTAGA 1 cut(s) 481
XceI RCATGY 3 cut(s) 519, 659, 717
XcmI CCANNNNNNNNNTGG 1 cut(s) 928
XmiI GTMKAC 1 cut(s) 1120
XmnI GAANNNNTTC 2 cut(s) 1081, 1191
XspI CTAG 7 cut(s) 135, 260, 482, 603, 992, 1074, 1199
Zsp2I ATGCAT 1 cut(s) 1730
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.