pycom03g10110

Domain of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
OG0000157
Physical Location & Seq
Reverse (-)
9159446 .. 9161546
2101 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g10110.1

Sequence Viewer

Length: 1731 bp
ATGCTTAGTCTAATTTCATCCCTTGCATCCATCACAGGAGAGGTATACTTGAACTTGTGTATGCCCCTTTACAAAGCTGCAATGGAAGGCAATTGGGAAACCGCCAAAGGCATCTTAAATATCAATCCGGCACTCTTAACTGCTAGCATAACAAGCGGAAGGGAAACTGTTCTTCACGTTGCAGCAGGAGCAAAGAACAATAATCAGATTGTGGCGGAACTAGTCAAGATGATGGATGAAGAAGACTTGGCACTTCAAGATATTAAAGGAAATACGGCACTGAGCTTTGCCGCTGCAACTGGAACGGTAGAAATTGCCAAGATTTTGATAGGAAAAAATAAGTTATTGCCGACAATTCCCGGTGGTCAAGGAATGACACCACTCTATATGGCTGCTTTGTTTGGACAGTCTGAAATGGCGTGGTATTTATACCCCCAAACATTTGAAATGCTGGATGAAATGGGCCGCATTGTTCTATTTTTCTGTTCTATCGATCATGGTCTTTATGATTTAGCCATGAAGTTGCTACAAGATGATAGAACATTAGCCATGGCTCGTAAAGACGACAATGAAACAGCCTTGCATGTCTTAGCTCGAAAGTCTTCAGAATTTGGCGACCAAAGTACTCCAGGAATGTGCAGTAGACTTATCAAAACATTTAAAGTGCTCCCATGCATGAGGGTTTCTTACAAAAGAAACTTGAAGCAAACTCAAGCCTTGAAGCTAGTCCAATGCCTTTGGAAAGAAATGTTGAGACATGATGACGACGAAGTCATGCATTTGATAAGAGAGCCTTCAGAATTAGTATTCGACGCAGCGAAATTAGGAAATTATGAGTTCTTATCTGTGCTTATTGACTCTTATCCGGAATTACTATTGGAATATGATGACAACAATCGGACCATATTCCATATTGCAGTCTTGCATCGTCATGCAAATATCTTCAATCTATTGCATGAGACAGGCTCCATCAAAGATATCATAGCAACATTCACTGATGATGAGAATAACAACATTCTACATCTAGCTGCAAAATTGGCACCTCAAGACCAACTCAATCTTGTGTCCGGAGCAGCTCTTCAGATGCAGCGAGAATTAGTATGGTTTGAGGAAGTTGAGAAGATTGTGCAACCTCCCTTTATAGATATGAAAAATACGCAAGGTAAAACACCTCGGGAATTATTCACTAGCGAGCATGAGGATCGATCAACGGTAAACTTGCGCAAGGGAGAATCATGGATGAAGGACACTACAAATTCATGCATGCTAGTTTCAACTCTTATCGCCACTGTCGTGTTTTCAGCCGCATTTAGCATTCCGGGAGGTATAGATGATAATAAAGGAACACCGAATTTCATAAAAGAGGCGGCATTTTTAATATTCGCCATATCTGATGGAGTAGCGCTCTTTTCCTCCTCAACTGCAATCCTCATGTTCTTGTACATCCTCACGTCGCGGTATGCTGAAAACGATTTTCTCAAATCTTTACCGTTGAAGTTGATGGTCGGACTCACATCACTCTTCGTGTCAATAACATCCATGATGGTAACTTTCAGCACAGCCTTCTATTTATCTTGCCATTATGGATTAAGATGGGTTCCAGATCTTATATTCATATTTGCATTTGTCCCAGTTGCTCTGTTCGCTTTCTTGCAGTATCCTCTCTTGTTTGATATGTTCTTTTCGACATATTGTTCAAGTCTTCTGTTTCAGCCAAGGAATATGATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

577

Amino Acids

64.65

Weight (kDa)

5.33

Isoelectric Point (pI)

39.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 58 - 145 3.8e-11 Ankyrin repeats (3 copies)
PGG PF13962 412 - 524 1.5e-27 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 770
Acc16I TGCGCA 1 cut(s) 1223
AccB1I GGYRCC 1 cut(s) 1039
AccI GTMKAC 2 cut(s) 45, 643
AccII CGCG 1 cut(s) 1456
AccIII TCCGGA 2 cut(s) 865, 1067
AciI CCGC 8 cut(s) 102, 156, 215, 291, 466, 1305, 1367, 1456
AclWI GGATC 1 cut(s) 1209
AcsI RAATTY 3 cut(s) 608, 1255, 1351
AcuI CTGAAG 3 cut(s) 588, 780, 1064
AfaI GTAC 2 cut(s) 625, 1442
AfeI AGCGCT 1 cut(s) 1404
AgsI TTSAA 9 cut(s) 52, 257, 446, 703, 721, 946, 1275, 1495, 1698
AhlI ACTAGT 1 cut(s) 220
AjiI CACGTC 1 cut(s) 1452
AjnI CCWGG 1 cut(s) 628
AleI CACNNNNGTG 1 cut(s) 1292
AluBI AGCT 6 cut(s) 77, 285, 593, 724, 1028, 1076
AluI AGCT 6 cut(s) 77, 285, 593, 724, 1028, 1076
Alw21I GWGCWC 1 cut(s) 669
Alw26I GTCTC 2 cut(s) 748, 953
AlwI GGATC 1 cut(s) 1209
Ama87I CYCGRG 1 cut(s) 1173
Aor13HI TCCGGA 2 cut(s) 865, 1067
Aor51HI AGCGCT 1 cut(s) 1404
AoxI GGCC 1 cut(s) 463
ApeKI GCWGC 8 cut(s) 77, 182, 293, 392, 815, 1028, 1073, 1087
ApoI RAATTY 3 cut(s) 608, 1255, 1351
Asp700I GAANNNNTTC 2 cut(s) 168, 601
AspLEI GCGC 2 cut(s) 1224, 1405
AspS9I GGNCC 2 cut(s) 463, 900
AsuC2I CCSGG 2 cut(s) 360, 1320
AsuNHI GCTAGC 1 cut(s) 143
AvaI CYCGRG 1 cut(s) 1173
AvaII GGWCC 1 cut(s) 900
BanI GGYRCC 1 cut(s) 1039
BbsI GAAGAC 3 cut(s) 249, 594, 1694
Bbv12I GWGCWC 1 cut(s) 669
BbvI GCAGC 8 cut(s) 64, 194, 280, 379, 827, 1015, 1085, 1099
BccI CCATC 7 cut(s) 38, 226, 977, 1388, 1495, 1537, 1587
BceAI ACGGC 1 cut(s) 291
BcgI CGANNNNNNTGC 2 cut(s) 1184, 1218
BciT130I CCWGG 1 cut(s) 630
BciVI GTATCC 1 cut(s) 1668
BcnI CCSGG 2 cut(s) 360, 1320
BcoDI GTCTC 2 cut(s) 748, 953
BcuI ACTAGT 1 cut(s) 220
BfaI CTAG 6 cut(s) 144, 221, 725, 1025, 1188, 1268
BfoI RGCGCY 1 cut(s) 1406
BfuI GTATCC 1 cut(s) 1668
BglII AGATCT 1 cut(s) 1603
BmcAI AGTACT 1 cut(s) 625
Bme1390I CCNGG 3 cut(s) 360, 630, 1320
Bme18I GGWCC 1 cut(s) 900
BmeT110I CYCGRG 1 cut(s) 1173
BmgBI CACGTC 1 cut(s) 1452
BmgT120I GGNCC 2 cut(s) 463, 900
BmiI GGNNCC 3 cut(s) 967, 1041, 1599
BmrFI CCNGG 3 cut(s) 360, 630, 1320
BmrI ACTGGG 1 cut(s) 1625
BmsI GCATC 4 cut(s) 35, 120, 934, 1074
BmtI GCTAGC 1 cut(s) 147
BmuI ACTGGG 1 cut(s) 1625
BpiI GAAGAC 3 cut(s) 249, 594, 1694
BplI GAGNNNNNCTC 4 cut(s) 950, 982, 1389, 1421
BpmI CTGGAG 1 cut(s) 612
BpuEI CTTGAG 2 cut(s) 696, 1029
BpuMI CCSGG 2 cut(s) 360, 1320
Bsa29I ATCGAT 2 cut(s) 492, 1204
BsaJI CCNNGG 3 cut(s) 549, 1172, 1715
BsaWI WCCGGW 2 cut(s) 865, 1067
Bse1I ACTGG 2 cut(s) 304, 1631
Bse3DI GCAATG 1 cut(s) 87
BseAI TCCGGA 2 cut(s) 865, 1067
BseBI CCWGG 1 cut(s) 630
BseCI ATCGAT 2 cut(s) 492, 1204
BseDI CCNNGG 3 cut(s) 549, 1172, 1715
BseGI GGATG 7 cut(s) 17, 26, 241, 460, 1245, 1443, 1535
BseMI GCAATG 1 cut(s) 87
BseMII CTCAG 1 cut(s) 272
BseNI ACTGG 2 cut(s) 304, 1631
BseRI GAGGAG 1 cut(s) 1405
BseXI GCAGC 8 cut(s) 64, 194, 280, 379, 827, 1015, 1085, 1099
BsgI GTGCAG 1 cut(s) 658
Bsh1236I CGCG 1 cut(s) 1456
BshFI GGCC 1 cut(s) 465
BshNI GGYRCC 1 cut(s) 1039
BshVI ATCGAT 2 cut(s) 492, 1204
BsiHKAI GWGCWC 1 cut(s) 669
BsiHKCI CYCGRG 1 cut(s) 1173
BsiSI CCGG 5 cut(s) 128, 360, 866, 1068, 1319
BslFI GGGAC 1 cut(s) 1613
BsmAI GTCTC 2 cut(s) 748, 953
BsmFI GGGAC 1 cut(s) 1613
BsmI GAATGC 1 cut(s) 1314
BsnI GGCC 1 cut(s) 465
BsoBI CYCGRG 1 cut(s) 1173
Bsp1286I GDGCHC 1 cut(s) 669
Bsp13I TCCGGA 2 cut(s) 865, 1067
Bsp1407I TGTACA 1 cut(s) 1440
Bsp143I GATC 4 cut(s) 493, 1201, 1205, 1603
Bsp19I CCATGG 1 cut(s) 549
BspACI CCGC 8 cut(s) 102, 156, 215, 291, 466, 1305, 1367, 1456
BspANI GGCC 1 cut(s) 465
BspCNI CTCAG 1 cut(s) 273
BspDI ATCGAT 2 cut(s) 492, 1204
BspEI TCCGGA 2 cut(s) 865, 1067
BspFNI CGCG 1 cut(s) 1456
BspLI GGNNCC 3 cut(s) 967, 1041, 1599
BspOI GCTAGC 1 cut(s) 147
BspPI GGATC 1 cut(s) 1209
BspQI GCTCTTC 1 cut(s) 1083
BspT107I GGYRCC 1 cut(s) 1039
BsrDI GCAATG 1 cut(s) 87
BsrGI TGTACA 1 cut(s) 1440
BsrI ACTGG 2 cut(s) 304, 1631
BssECI CCNNGG 3 cut(s) 549, 1172, 1715
BssMI GATC 4 cut(s) 493, 1201, 1205, 1603
BssNAI GTATAC 1 cut(s) 46
BssT1I CCWWGG 2 cut(s) 549, 1715
Bst1107I GTATAC 1 cut(s) 46
Bst2UI CCWGG 1 cut(s) 630
Bst4CI ACNGT 6 cut(s) 169, 307, 408, 1213, 1291, 1491
Bst6I CTCTTC 2 cut(s) 1083, 1526
BstAUI TGTACA 1 cut(s) 1440
BstC8I GCNNGC 3 cut(s) 145, 1193, 1265
BstDEI CTNAG 3 cut(s) 5, 281, 589
BstDSI CCRYGG 1 cut(s) 549
BstF5I GGATG 7 cut(s) 17, 26, 241, 460, 1245, 1443, 1535
BstFNI CGCG 1 cut(s) 1456
BstH2I RGCGCY 1 cut(s) 1406
BstHHI GCGC 2 cut(s) 1224, 1405
BstKTI GATC 4 cut(s) 496, 1204, 1208, 1606
BstMAI GTCTC 2 cut(s) 748, 953
BstMBI GATC 4 cut(s) 493, 1201, 1205, 1603
BstMWI GCNNNNNNNGC 4 cut(s) 153, 188, 1037, 1643
BstNI CCWGG 1 cut(s) 630
BstNSI RCATGY 2 cut(s) 587, 1267
BstSCI CCNGG 3 cut(s) 358, 628, 1318
BstUI CGCG 1 cut(s) 1456
BstV1I GCAGC 8 cut(s) 64, 194, 280, 379, 827, 1015, 1085, 1099
BstV2I GAAGAC 3 cut(s) 249, 594, 1694
BstX2I RGATCY 1 cut(s) 1603
BstYI RGATCY 1 cut(s) 1603
BstZ17I GTATAC 1 cut(s) 46
Bsu15I ATCGAT 2 cut(s) 492, 1204
BsuI GTATCC 1 cut(s) 1668
BsuRI GGCC 1 cut(s) 465
BsuTUI ATCGAT 2 cut(s) 492, 1204
BtgI CCRYGG 1 cut(s) 549
BtrI CACGTC 1 cut(s) 1452
BtsCI GGATG 7 cut(s) 17, 26, 241, 460, 1245, 1443, 1535
BtsIMutI CAGTG 3 cut(s) 278, 993, 1287
Cac8I GCNNGC 3 cut(s) 145, 1193, 1265
CfoI GCGC 2 cut(s) 1224, 1405
Cfr13I GGNCC 2 cut(s) 463, 900
ClaI ATCGAT 2 cut(s) 492, 1204
CseI GACGC 1 cut(s) 821
Csp6I GTAC 2 cut(s) 624, 1441
CviQI GTAC 2 cut(s) 624, 1441
DdeI CTNAG 3 cut(s) 5, 281, 589
DpnI GATC 4 cut(s) 495, 1203, 1207, 1605
DpnII GATC 4 cut(s) 493, 1201, 1205, 1603
DraI TTTAAA 1 cut(s) 661
DrdI GACNNNNNNGTC 1 cut(s) 770
DseDI GACNNNNNNGTC 1 cut(s) 770
Eam1104I CTCTTC 2 cut(s) 1083, 1526
EarI CTCTTC 2 cut(s) 1083, 1526
EciI GGCGGA 1 cut(s) 230
Eco130I CCWWGG 2 cut(s) 549, 1715
Eco32I GATATC 1 cut(s) 979
Eco47I GGWCC 1 cut(s) 900
Eco47III AGCGCT 1 cut(s) 1404
Eco57I CTGAAG 3 cut(s) 588, 780, 1064
Eco88I CYCGRG 1 cut(s) 1173
EcoRII CCWGG 1 cut(s) 628
EcoRV GATATC 1 cut(s) 979
EcoT14I CCWWGG 2 cut(s) 549, 1715
EcoT22I ATGCAT 3 cut(s) 677, 780, 1265
ErhI CCWWGG 2 cut(s) 549, 1715
FalI AAGNNNNNCTT 2 cut(s) 778, 810
FaqI GGGAC 1 cut(s) 1613
FblI GTMKAC 2 cut(s) 45, 643
FokI GGATG 7 cut(s) 4, 13, 248, 467, 1252, 1430, 1522
FspBI CTAG 6 cut(s) 144, 221, 725, 1025, 1188, 1268
FspI TGCGCA 1 cut(s) 1223
GlaI GCGC 2 cut(s) 1223, 1404
GsuI CTGGAG 1 cut(s) 612
HaeII RGCGCY 1 cut(s) 1406
HaeIII GGCC 1 cut(s) 465
HapII CCGG 5 cut(s) 128, 360, 866, 1068, 1319
HgaI GACGC 1 cut(s) 821
HhaI GCGC 2 cut(s) 1224, 1405
Hin6I GCGC 2 cut(s) 1222, 1403
HinP1I GCGC 2 cut(s) 1222, 1403
HinfI GANTC 3 cut(s) 857, 1232, 1509
HpaII CCGG 5 cut(s) 128, 360, 866, 1068, 1319
Hpy166II GTNNAC 3 cut(s) 46, 644, 1216
Hpy188I TCNGA 8 cut(s) 207, 412, 607, 799, 900, 1083, 1393, 1508
Hpy188III TCNNGA 7 cut(s) 226, 257, 866, 1046, 1068, 1175, 1601
Hpy8I GTNNAC 3 cut(s) 46, 644, 1216
Hpy99I CGWCG 3 cut(s) 770, 815, 1456
HpyAV CCTTC 5 cut(s) 80, 153, 804, 1237, 1573
HpyCH4III ACNGT 6 cut(s) 169, 307, 408, 1213, 1291, 1491
HpyCH4IV ACGT 2 cut(s) 177, 1451
HpyF10VI GCNNNNNNNGC 4 cut(s) 153, 188, 1037, 1643
HpyF3I CTNAG 3 cut(s) 5, 281, 589
HpySE526I ACGT 2 cut(s) 177, 1451
HspAI GCGC 2 cut(s) 1222, 1403
Kpn2I TCCGGA 2 cut(s) 865, 1067
Kzo9I GATC 4 cut(s) 493, 1201, 1205, 1603
LguI GCTCTTC 1 cut(s) 1083
LmnI GCTCC 4 cut(s) 188, 672, 971, 1070
Lsp1109I GCAGC 8 cut(s) 64, 194, 280, 379, 827, 1015, 1085, 1099
LweI GCATC 4 cut(s) 35, 120, 934, 1074
MaeI CTAG 6 cut(s) 144, 221, 725, 1025, 1188, 1268
MaeII ACGT 2 cut(s) 177, 1451
MaeIII GTNAC 1 cut(s) 1546
MalI GATC 4 cut(s) 495, 1203, 1207, 1605
MboI GATC 4 cut(s) 493, 1201, 1205, 1603
MboII GAAGA 9 cut(s) 164, 251, 254, 594, 934, 1070, 1132, 1513, 1694
MfeI CAATTG 1 cut(s) 91
MflI RGATCY 1 cut(s) 1603
MhlI GDGCHC 1 cut(s) 669
MlyI GAGTC 2 cut(s) 851, 1503
MmeI TCCRAC 1 cut(s) 1486
Mph1103I ATGCAT 3 cut(s) 677, 780, 1265
MroI TCCGGA 2 cut(s) 865, 1067
MroXI GAANNNNTTC 2 cut(s) 168, 601
MseI TTAA 7 cut(s) 116, 137, 264, 660, 1376, 1589, 1729
MslI CAYNNNNRTG 2 cut(s) 930, 1292
MspA1I CMGCKG 1 cut(s) 293
MspI CCGG 5 cut(s) 128, 360, 866, 1068, 1319
MspR9I CCNGG 3 cut(s) 360, 630, 1320
MunI CAATTG 1 cut(s) 91
Mva1269I GAATGC 1 cut(s) 1314
MvaI CCWGG 1 cut(s) 630
MvnI CGCG 1 cut(s) 1456
MwoI GCNNNNNNNGC 4 cut(s) 153, 188, 1037, 1643
NciI CCSGG 2 cut(s) 360, 1320
NcoI CCATGG 1 cut(s) 549
NdeII GATC 4 cut(s) 493, 1201, 1205, 1603
NheI GCTAGC 1 cut(s) 143
NlaIV GGNNCC 3 cut(s) 967, 1041, 1599
NsbI TGCGCA 1 cut(s) 1223
NsiI ATGCAT 3 cut(s) 677, 780, 1265
NspI RCATGY 2 cut(s) 587, 1267
OliI CACNNNNGTG 1 cut(s) 1292
PaeI GCATGC 1 cut(s) 1267
PciSI GCTCTTC 1 cut(s) 1083
PcsI WCGNNNNNNNCGW 1 cut(s) 1290
PctI GAATGC 1 cut(s) 1314
PdmI GAANNNNTTC 2 cut(s) 168, 601
PfeI GAWTC 1 cut(s) 1232
PflFI GACNNNGTC 1 cut(s) 770
PfoI TCCNGGA 2 cut(s) 628, 1318
PleI GAGTC 2 cut(s) 851, 1503
PpsI GAGTC 2 cut(s) 851, 1503
Psp6I CCWGG 1 cut(s) 628
PspGI CCWGG 1 cut(s) 628
PspN4I GGNNCC 3 cut(s) 967, 1041, 1599
PspPI GGNCC 2 cut(s) 463, 900
PsuI RGATCY 1 cut(s) 1603
PsyI GACNNNGTC 1 cut(s) 770
RsaI GTAC 2 cut(s) 625, 1442
RsaNI GTAC 2 cut(s) 624, 1441
RseI CAYNNNNRTG 2 cut(s) 930, 1292
SapI GCTCTTC 1 cut(s) 1083
SaqAI TTAA 7 cut(s) 116, 137, 264, 660, 1376, 1589, 1729
Sau3AI GATC 4 cut(s) 493, 1201, 1205, 1603
Sau96I GGNCC 2 cut(s) 463, 900
ScaI AGTACT 1 cut(s) 625
SchI GAGTC 2 cut(s) 851, 1503
ScrFI CCNGG 3 cut(s) 360, 630, 1320
SduI GDGCHC 1 cut(s) 669
SfaNI GCATC 4 cut(s) 35, 120, 934, 1074
SinI GGWCC 1 cut(s) 900
SmiMI CAYNNNNRTG 2 cut(s) 930, 1292
SmlI CTYRAG 2 cut(s) 711, 1044
SmoI CTYRAG 2 cut(s) 711, 1044
SpeI ACTAGT 1 cut(s) 220
SphI GCATGC 1 cut(s) 1267
SsiI CCGC 8 cut(s) 102, 156, 215, 291, 466, 1305, 1367, 1456
SspI AATATT 1 cut(s) 1380
SspMI CTAG 6 cut(s) 144, 221, 725, 1025, 1188, 1268
StyD4I CCNGG 3 cut(s) 358, 628, 1318
StyI CCWWGG 2 cut(s) 549, 1715
TaaI ACNGT 6 cut(s) 169, 307, 408, 1213, 1291, 1491
TaiI ACGT 2 cut(s) 180, 1454
TaqI TCGA 5 cut(s) 492, 595, 810, 1204, 1685
TatI WGTACW 2 cut(s) 623, 1440
TauI GCSGC 4 cut(s) 293, 468, 1307, 1370
TfiI GAWTC 1 cut(s) 1232
Tru1I TTAA 7 cut(s) 116, 137, 264, 660, 1376, 1589, 1729
Tru9I TTAA 7 cut(s) 116, 137, 264, 660, 1376, 1589, 1729
TscAI CASTG 3 cut(s) 285, 1000, 1294
TseI GCWGC 8 cut(s) 77, 182, 293, 392, 815, 1028, 1073, 1087
TspRI CASTG 3 cut(s) 285, 1000, 1294
Tth111I GACNNNGTC 1 cut(s) 770
VpaK11BI GGWCC 1 cut(s) 900
XapI RAATTY 3 cut(s) 608, 1255, 1351
XceI RCATGY 2 cut(s) 587, 1267
XmiI GTMKAC 2 cut(s) 45, 643
XmnI GAANNNNTTC 2 cut(s) 168, 601
XspI CTAG 6 cut(s) 144, 221, 725, 1025, 1188, 1268
ZrmI AGTACT 1 cut(s) 625
Zsp2I ATGCAT 3 cut(s) 677, 780, 1265
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.