Rw5G028280

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000157
Physical Location & Seq
Reverse (-)
42761289 .. 42769270
7982 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G028280.1

Sequence Viewer

Length: 1848 bp
ATGTCTAGCCCACAAGCACACAATTCTGTACCGCCTGGAATTCAATTGATGGCTACTGGAAATGGAGATCCAATAGCAACAGCACATTACGTCATCAACATTCGCTCAACACCTTCGGATCTTTTTCTACAGAACGACAATAGAGAGCTATACCTTAATACATGTGTGCCACTCAATAAGTATGCACTAAAAGGCAATTGGGAAGCTGCTGAACGAATTTTGAGGAATGATCCAAGGCTTTTGACTTATAGCATAACAAGAGGATGGGACACTGTCCTTCACATTGCAGCAGGGGCAAGACATGTTCACTTTGTGGAGAAGCTGGTAGAAATGATGGAAGAATTGAATGGACAGGAGAAATGTTCACAAGACTTGGCACTGCAAGACATGAATGGAAACACTGCCTTCAGCATTGCTGCTGCAGCAGGAAGTATTGAAATTGCACATATTATGATGAAGAAGAATAAGTATTTGCCAGTAATTCGAGGCGGTGAAGGAATGACACCACTCTATATGGCCGCCTTGTTGGGGCAGTCTGTAATGGCAGATAACCTGTACTCTAGAACCAAGGAAATGTTAGAGGAAGCCGACCGACAAGCGTTGTTTTTTACTTGTATCGATAATGGTTTGTATGATCTAGCTATGAAGATGCTAAGAAGTGATAGAGCATTAGCTAAGGCTCGTAATGCAAAACAAGAAACAGCTTTGCATATCTTGGCTAGAACGCCTTCAGAATTCACCAGCCAAAGTCCAGGAATGTGGAGTAGACTCATCAACTCATTTATCCCAGGTTGGAAGTTCTCATACAATGGAAACATGAAACAAATCAATGAAGCCCTTCAACTAGTCAAATGCCTTTGGACAGAAATCTTGAGAAATGATCATGACGATGTGATGAGACTAATCAAACATCCTTCAAAATTACTGTTTGATGCTACAAAATTAGGAAATTATGAGTTCCTGGCAGTGCTTATTAACTCTTATCCAGATTTAATATGGCAACTTGATGACGAAAATCGGAGTATAATCCATGTTGCTGTTTTGCATCGTCATGCAAGTATCTTCAATTTAGTGCATGAGATAGGCTCTATCAAGGATATGATAGTGACATTTACTGATAATGATGAGACTAATAACATTTTACATATGGCTGCAAAATTAGCACCCCCAAATCAACTCAACCTTGTATCAGGAGCAGCTCTTCAAATGCAGCGAGAGTTGGCATGGTTTGAGGAAGTAAAAAAGATTGTACAACCCAACTCCATAGAGATGAAAAACAAGAAAGGAAACACACCACGAGAATTGTTCACAAGTGAGCATAAAGAGTTGTTACACAAAGGAGAAGCATGGATGAAGGACACTGCAAATTCATGCATGATTGTTGCGGCTCTTATCGCAACTGTTGTATTTTCAGCTGCATTTAGCGTACCTGGTGGTACGTCTGATAATACAGGACAACCAAACTTTCTAAAAGAGACTGCTTTCCTATTCTTTGCCATAGCAGATGGAGTAGCACTCGTTTCCTCTTCAACTTCAATACTGATGTTCTTGTTCATCCTCACATCGCGTTACGCTGAAGGTGATTTTCTCAAATCGTTACCGTTGAAGTTGATGATAGGACTCGCATCGCTTTTCATATCTATAGCATCCATGATGGTAGCTTTTAGCACAACCTTCTATTTAGACTGTCATTATGGATTAGGATGGGTCCCAAATCTTATATTTGTATTTGCATTTGTCCCGGTTGCTTTGTTTGCTTTTCTGCAGTTTCCTCTCTTGTCTGATATGTTTTCTTCTACATATTGTTCAAGTCTTTTATTTCAGCCATGGAAACATATGATCGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

615

Amino Acids

68.92

Weight (kDa)

6.23

Isoelectric Point (pI)

43.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 62 - 154 5.2e-06 Ankyrin repeats (3 copies)
PGG PF13962 449 - 561 3.6e-26 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 766
AccII CGCG 1 cut(s) 1567
AciI CCGC 4 cut(s) 32, 489, 519, 1385
AclWI GGATC 3 cut(s) 62, 126, 224
AcoI YGGCCR 1 cut(s) 516
AcsI RAATTY 4 cut(s) 39, 216, 734, 1366
AcuI CTGAAG 3 cut(s) 391, 714, 1596
AdeI CACNNNGTG 1 cut(s) 313
AfaI GTAC 5 cut(s) 30, 557, 1251, 1428, 1438
AfiI CCNNNNNNNGG 1 cut(s) 528
AflIII ACRYGT 2 cut(s) 161, 301
AhlI ACTAGT 1 cut(s) 844
AjnI CCWGG 5 cut(s) 34, 751, 787, 960, 1429
AluBI AGCT 9 cut(s) 148, 206, 322, 641, 674, 704, 1199, 1415, 1661
AluI AGCT 9 cut(s) 148, 206, 322, 641, 674, 704, 1199, 1415, 1661
Alw26I GTCTC 3 cut(s) 892, 1121, 1469
AlwI GGATC 3 cut(s) 62, 126, 224
AoxI GGCC 1 cut(s) 516
ApeKI GCWGC 9 cut(s) 206, 287, 416, 419, 422, 1151, 1196, 1210, 1415
ApoI RAATTY 4 cut(s) 39, 216, 734, 1366
Asp700I GAANNNNTTC 2 cut(s) 727, 837
AspS9I GGNCC 1 cut(s) 1708
AsuC2I CCSGG 1 cut(s) 1742
AsuHPI GGTGA 3 cut(s) 503, 730, 1592
AvaII GGWCC 1 cut(s) 1708
BarI GAAGNNNNNNTAC 2 cut(s) 788, 820
BauI CACGAG 1 cut(s) 1296
BbvI GCAGC 9 cut(s) 193, 299, 403, 406, 434, 1138, 1208, 1222, 1402
BccI CCATC 6 cut(s) 43, 258, 328, 1499, 1648, 1698
BciT130I CCWGG 5 cut(s) 36, 753, 789, 962, 1431
BclI TGATCA 1 cut(s) 880
BcnI CCSGG 1 cut(s) 1742
BcoDI GTCTC 3 cut(s) 892, 1121, 1469
BcuI ACTAGT 1 cut(s) 844
BfaI CTAG 6 cut(s) 6, 561, 638, 720, 845, 1846
BfmI CTRYAG 4 cut(s) 128, 420, 1641, 1763
Bme1390I CCNGG 6 cut(s) 36, 753, 789, 962, 1431, 1742
Bme18I GGWCC 1 cut(s) 1708
BmgT120I GGNCC 1 cut(s) 1708
BmiI GGNNCC 2 cut(s) 1709, 1710
BmrFI CCNGG 6 cut(s) 36, 753, 789, 962, 1431, 1742
BmsI GCATC 5 cut(s) 639, 922, 1054, 1634, 1655
BplI GAGNNNNNCTC 4 cut(s) 1070, 1102, 1500, 1532
Bpu10I CCTNAGC 1 cut(s) 675
BpuEI CTTGAG 1 cut(s) 892
BpuMI CCSGG 1 cut(s) 1742
Bsa29I ATCGAT 1 cut(s) 618
BsaJI CCNNGG 4 cut(s) 233, 567, 787, 1826
Bsc4I CCNNNNNNNGG 1 cut(s) 528
Bse1I ACTGG 2 cut(s) 61, 476
Bse3DI GCAATG 2 cut(s) 282, 411
BseBI CCWGG 5 cut(s) 36, 753, 789, 962, 1431
BseCI ATCGAT 1 cut(s) 618
BseDI CCNNGG 4 cut(s) 233, 567, 787, 1826
BseGI GGATG 6 cut(s) 269, 910, 1356, 1554, 1646, 1709
BseLI CCNNNNNNNGG 1 cut(s) 528
BseMI GCAATG 2 cut(s) 282, 411
BseNI ACTGG 2 cut(s) 61, 476
BseXI GCAGC 9 cut(s) 193, 299, 403, 406, 434, 1138, 1208, 1222, 1402
Bsh1236I CGCG 1 cut(s) 1567
Bsh1285I CGRYCG 1 cut(s) 592
BshFI GGCC 1 cut(s) 518
BshVI ATCGAT 1 cut(s) 618
BsiEI CGRYCG 1 cut(s) 592
BsiSI CCGG 1 cut(s) 1742
BslFI GGGAC 3 cut(s) 281, 1694, 1724
BslI CCNNNNNNNGG 1 cut(s) 528
BsmAI GTCTC 3 cut(s) 892, 1121, 1469
BsmFI GGGAC 3 cut(s) 281, 1694, 1724
BsnI GGCC 1 cut(s) 518
Bsp1407I TGTACA 1 cut(s) 1249
Bsp143I GATC 6 cut(s) 67, 118, 229, 634, 880, 1839
Bsp19I CCATGG 1 cut(s) 1826
BspACI CCGC 4 cut(s) 32, 489, 519, 1385
BspANI GGCC 1 cut(s) 518
BspDI ATCGAT 1 cut(s) 618
BspFNI CGCG 1 cut(s) 1567
BspHI TCATGA 1 cut(s) 883
BspLI GGNNCC 2 cut(s) 1709, 1710
BspMAI CTGCAG 2 cut(s) 424, 1767
BspPI GGATC 3 cut(s) 62, 126, 224
BspQI GCTCTTC 1 cut(s) 1206
BsrDI GCAATG 2 cut(s) 282, 411
BsrGI TGTACA 1 cut(s) 1249
BsrI ACTGG 2 cut(s) 61, 476
BssECI CCNNGG 4 cut(s) 233, 567, 787, 1826
BssMI GATC 6 cut(s) 67, 118, 229, 634, 880, 1839
BssSI CACGAG 1 cut(s) 1296
BssT1I CCWWGG 3 cut(s) 233, 567, 1826
Bst2BI CACGAG 1 cut(s) 1296
Bst2UI CCWGG 5 cut(s) 36, 753, 789, 962, 1431
Bst4CI ACNGT 5 cut(s) 274, 927, 1402, 1602, 1688
Bst6I CTCTTC 2 cut(s) 1206, 1531
BstAUI TGTACA 1 cut(s) 1249
BstDEI CTNAG 2 cut(s) 653, 675
BstDSI CCRYGG 1 cut(s) 1826
BstF5I GGATG 6 cut(s) 269, 910, 1356, 1554, 1646, 1709
BstFNI CGCG 1 cut(s) 1567
BstKTI GATC 6 cut(s) 70, 121, 232, 637, 883, 1842
BstMAI GTCTC 3 cut(s) 892, 1121, 1469
BstMBI GATC 6 cut(s) 67, 118, 229, 634, 880, 1839
BstMCI CGRYCG 1 cut(s) 592
BstMWI GCNNNNNNNGC 6 cut(s) 293, 422, 686, 1160, 1394, 1754
BstNI CCWGG 5 cut(s) 36, 753, 789, 962, 1431
BstNSI RCATGY 2 cut(s) 165, 305
BstSCI CCNGG 6 cut(s) 34, 751, 787, 960, 1429, 1740
BstSFI CTRYAG 4 cut(s) 128, 420, 1641, 1763
BstUI CGCG 1 cut(s) 1567
BstV1I GCAGC 9 cut(s) 193, 299, 403, 406, 434, 1138, 1208, 1222, 1402
BstX2I RGATCY 2 cut(s) 67, 118
BstXI CCANNNNNNTGG 1 cut(s) 759
BstYI RGATCY 2 cut(s) 67, 118
Bsu15I ATCGAT 1 cut(s) 618
BsuRI GGCC 1 cut(s) 518
BsuTUI ATCGAT 1 cut(s) 618
BtgI CCRYGG 1 cut(s) 1826
BtgZI GCGATG 2 cut(s) 1548, 1611
BtsCI GGATG 6 cut(s) 269, 910, 1356, 1554, 1646, 1709
BtsI GCAGTG 4 cut(s) 377, 399, 972, 1359
BtsIMutI CAGTG 5 cut(s) 270, 377, 399, 972, 1359
CciI TCATGA 1 cut(s) 883
Cfr13I GGNCC 1 cut(s) 1708
ClaI ATCGAT 1 cut(s) 618
CsiI ACCWGGT 1 cut(s) 1429
Csp6I GTAC 5 cut(s) 29, 556, 1250, 1427, 1437
CspCI CAANNNNNGTGG 2 cut(s) 1284, 1319
CviQI GTAC 5 cut(s) 29, 556, 1250, 1427, 1437
DdeI CTNAG 2 cut(s) 653, 675
DpnI GATC 6 cut(s) 69, 120, 231, 636, 882, 1841
DpnII GATC 6 cut(s) 67, 118, 229, 634, 880, 1839
DraIII CACNNNGTG 1 cut(s) 313
EaeI YGGCCR 1 cut(s) 516
Eam1104I CTCTTC 2 cut(s) 1206, 1531
EarI CTCTTC 2 cut(s) 1206, 1531
Eco130I CCWWGG 3 cut(s) 233, 567, 1826
Eco47I GGWCC 1 cut(s) 1708
Eco57I CTGAAG 3 cut(s) 391, 714, 1596
EcoO109I RGGNCCY 1 cut(s) 1708
EcoRI GAATTC 2 cut(s) 39, 734
EcoRII CCWGG 5 cut(s) 34, 751, 787, 960, 1429
EcoT14I CCWWGG 3 cut(s) 233, 567, 1826
EcoT22I ATGCAT 1 cut(s) 1376
ErhI CCWWGG 3 cut(s) 233, 567, 1826
FaqI GGGAC 3 cut(s) 281, 1694, 1724
FauNDI CATATG 2 cut(s) 1146, 1836
FbaI TGATCA 1 cut(s) 880
FblI GTMKAC 1 cut(s) 766
FokI GGATG 6 cut(s) 276, 897, 1363, 1541, 1633, 1716
FspBI CTAG 6 cut(s) 6, 561, 638, 720, 845, 1846
HaeIII GGCC 1 cut(s) 518
HapII CCGG 1 cut(s) 1742
HinfI GANTC 2 cut(s) 768, 1620
HpaII CCGG 1 cut(s) 1742
HphI GGTGA 3 cut(s) 503, 730, 1592
Hpy166II GTNNAC 4 cut(s) 307, 365, 767, 1308
Hpy188I TCNGA 5 cut(s) 118, 733, 1020, 1444, 1783
Hpy188III TCNNGA 5 cut(s) 561, 871, 884, 986, 1191
Hpy8I GTNNAC 4 cut(s) 307, 365, 767, 1308
HpyCH4III ACNGT 5 cut(s) 274, 927, 1402, 1602, 1688
HpyCH4IV ACGT 2 cut(s) 90, 1439
HpyF10VI GCNNNNNNNGC 6 cut(s) 293, 422, 686, 1160, 1394, 1754
HpyF3I CTNAG 2 cut(s) 653, 675
HpySE526I ACGT 2 cut(s) 90, 1439
KflI GGGWCCC 1 cut(s) 1708
Ksp22I TGATCA 1 cut(s) 880
Kzo9I GATC 6 cut(s) 67, 118, 229, 634, 880, 1839
LguI GCTCTTC 1 cut(s) 1206
LmnI GCTCC 1 cut(s) 1193
Lsp1109I GCAGC 9 cut(s) 193, 299, 403, 406, 434, 1138, 1208, 1222, 1402
LweI GCATC 5 cut(s) 639, 922, 1054, 1634, 1655
MabI ACCWGGT 1 cut(s) 1429
MaeI CTAG 6 cut(s) 6, 561, 638, 720, 845, 1846
MaeII ACGT 2 cut(s) 90, 1439
MaeIII GTNAC 4 cut(s) 1105, 1329, 1568, 1596
MalI GATC 6 cut(s) 69, 120, 231, 636, 882, 1841
MboI GATC 6 cut(s) 67, 118, 229, 634, 880, 1839
MboII GAAGA 8 cut(s) 350, 469, 472, 658, 1054, 1193, 1518, 1785
MfeI CAATTG 2 cut(s) 44, 196
MflI RGATCY 2 cut(s) 67, 118
MlyI GAGTC 2 cut(s) 762, 1614
MmeI TCCRAC 1 cut(s) 773
MnlI CCTC 8 cut(s) 216, 254, 479, 574, 1225, 1534, 1568, 1782
Mph1103I ATGCAT 1 cut(s) 1376
MroXI GAANNNNTTC 2 cut(s) 727, 837
MseI TTAA 3 cut(s) 156, 975, 992
MslI CAYNNNNRTG 3 cut(s) 888, 1050, 1268
MspA1I CMGCKG 1 cut(s) 1415
MspI CCGG 1 cut(s) 1742
MspR9I CCNGG 6 cut(s) 36, 753, 789, 962, 1431, 1742
MunI CAATTG 2 cut(s) 44, 196
MvaI CCWGG 5 cut(s) 36, 753, 789, 962, 1431
MvnI CGCG 1 cut(s) 1567
MwoI GCNNNNNNNGC 6 cut(s) 293, 422, 686, 1160, 1394, 1754
NciI CCSGG 1 cut(s) 1742
NcoI CCATGG 1 cut(s) 1826
NdeI CATATG 2 cut(s) 1146, 1836
NdeII GATC 6 cut(s) 67, 118, 229, 634, 880, 1839
NlaIV GGNNCC 2 cut(s) 1709, 1710
NmuCI GTSAC 1 cut(s) 1105
NsiI ATGCAT 1 cut(s) 1376
NspI RCATGY 2 cut(s) 165, 305
PagI TCATGA 1 cut(s) 883
PciI ACATGT 2 cut(s) 161, 301
PciSI GCTCTTC 1 cut(s) 1206
PdmI GAANNNNTTC 2 cut(s) 727, 837
PflFI GACNNNGTC 1 cut(s) 272
PfoI TCCNGGA 1 cut(s) 751
PleI GAGTC 2 cut(s) 762, 1614
PpsI GAGTC 2 cut(s) 762, 1614
PpuMI RGGWCCY 1 cut(s) 1708
PscI ACATGT 2 cut(s) 161, 301
Psp5II RGGWCCY 1 cut(s) 1708
Psp6I CCWGG 5 cut(s) 34, 751, 787, 960, 1429
PspGI CCWGG 5 cut(s) 34, 751, 787, 960, 1429
PspN4I GGNNCC 2 cut(s) 1709, 1710
PspPI GGNCC 1 cut(s) 1708
PspPPI RGGWCCY 1 cut(s) 1708
PstI CTGCAG 2 cut(s) 424, 1767
PsuI RGATCY 2 cut(s) 67, 118
PsyI GACNNNGTC 1 cut(s) 272
PvuII CAGCTG 1 cut(s) 1415
RsaI GTAC 5 cut(s) 30, 557, 1251, 1428, 1438
RsaNI GTAC 5 cut(s) 29, 556, 1250, 1427, 1437
RseI CAYNNNNRTG 3 cut(s) 888, 1050, 1268
SapI GCTCTTC 1 cut(s) 1206
SaqAI TTAA 3 cut(s) 156, 975, 992
Sau3AI GATC 6 cut(s) 67, 118, 229, 634, 880, 1839
Sau96I GGNCC 1 cut(s) 1708
SchI GAGTC 2 cut(s) 762, 1614
ScrFI CCNGG 6 cut(s) 36, 753, 789, 962, 1431, 1742
SexAI ACCWGGT 1 cut(s) 1429
SfaNI GCATC 5 cut(s) 639, 922, 1054, 1634, 1655
SfcI CTRYAG 4 cut(s) 128, 420, 1641, 1763
SinI GGWCC 1 cut(s) 1708
SmiMI CAYNNNNRTG 3 cut(s) 888, 1050, 1268
SmlI CTYRAG 1 cut(s) 871
SmoI CTYRAG 1 cut(s) 871
SpeI ACTAGT 1 cut(s) 844
SsiI CCGC 4 cut(s) 32, 489, 519, 1385
SspMI CTAG 6 cut(s) 6, 561, 638, 720, 845, 1846
StyD4I CCNGG 6 cut(s) 34, 751, 787, 960, 1429, 1740
StyI CCWWGG 3 cut(s) 233, 567, 1826
TaaI ACNGT 5 cut(s) 274, 927, 1402, 1602, 1688
TaiI ACGT 2 cut(s) 93, 1442
TaqI TCGA 3 cut(s) 484, 618, 1842
TaqII GACCGA 1 cut(s) 606
TatI WGTACW 2 cut(s) 555, 1249
TauI GCSGC 2 cut(s) 521, 1388
Tru1I TTAA 3 cut(s) 156, 975, 992
Tru9I TTAA 3 cut(s) 156, 975, 992
TscAI CASTG 5 cut(s) 277, 384, 406, 972, 1366
TseFI GTSAC 1 cut(s) 1105
TseI GCWGC 9 cut(s) 206, 287, 416, 419, 422, 1151, 1196, 1210, 1415
Tsp45I GTSAC 1 cut(s) 1105
TspRI CASTG 5 cut(s) 277, 384, 406, 972, 1366
Tth111I GACNNNGTC 1 cut(s) 272
VpaK11BI GGWCC 1 cut(s) 1708
XapI RAATTY 4 cut(s) 39, 216, 734, 1366
XbaI TCTAGA 1 cut(s) 560
XceI RCATGY 2 cut(s) 165, 305
XcmI CCANNNNNNNNNTGG 1 cut(s) 993
XmiI GTMKAC 1 cut(s) 766
XmnI GAANNNNTTC 2 cut(s) 727, 837
XspI CTAG 6 cut(s) 6, 561, 638, 720, 845, 1846
Zsp2I ATGCAT 1 cut(s) 1376
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.